View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10326_high_8 (Length: 299)
Name: NF10326_high_8
Description: NF10326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10326_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 276
Target Start/End: Complemental strand, 3948328 - 3948058
Alignment:
| Q |
14 |
aggggatgaaagtaaagcaaccaggttcctcatgtaacgtaacttatggccttatgagggttagatgtaa--------cagagtactgatgctatatatg |
105 |
Q |
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| T |
3948328 |
aggggatgaaagtaaagcaaccaggttcctcaagtaacgtaacttattgccttatgagggtgagatgtaaatatataacagagtactgatgctatatatg |
3948229 |
T |
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| Q |
106 |
ttatatcaataaaagtagaaaaagaaaacaagagatgcatgacataactgtgccttactatgaaagtgagagaaagtaacaaaagaatgtgggagcaata |
205 |
Q |
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| T |
3948228 |
ttatatcaataaaagtagaaaaagaaaacaagagatgcatgacataactgtgccttcctatgaaagtgagcaaaagtaacaaaagaatgtgggagcaata |
3948129 |
T |
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| Q |
206 |
acaaaattgtacaactactacgtagatagagtgtgaaagagaaataagaaaagtgtgatcattattgagag |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3948128 |
acaaaattgtacaactactacgtagatagagtgtgaaagagaaataagaaaagtgtgatcattattgagag |
3948058 |
T |
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