View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10327_low_37 (Length: 238)

Name: NF10327_low_37
Description: NF10327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10327_low_37
NF10327_low_37
[»] scaffold0280 (2 HSPs)
scaffold0280 (59-223)||(5632-5796)
scaffold0280 (1-58)||(23219-23277)
[»] chr7 (21 HSPs)
chr7 (1-58)||(2759337-2759394)
chr7 (5-56)||(13636277-13636328)
chr7 (3-57)||(9034217-9034271)
chr7 (1-59)||(3271066-3271125)
chr7 (106-210)||(4500481-4500585)
chr7 (4-56)||(9391126-9391178)
chr7 (2-62)||(13773104-13773164)
chr7 (5-56)||(11769779-11769830)
chr7 (2-57)||(19158919-19158974)
chr7 (2-57)||(20758318-20758373)
chr7 (7-57)||(11773106-11773156)
chr7 (7-57)||(15082468-15082518)
chr7 (6-56)||(23969789-23969839)
chr7 (6-56)||(44013349-44013399)
chr7 (7-56)||(1860780-1860829)
chr7 (3-56)||(12128691-12128744)
chr7 (7-56)||(13920369-13920418)
chr7 (3-60)||(16997495-16997552)
chr7 (5-58)||(27848659-27848712)
chr7 (4-56)||(13850870-13850922)
chr7 (4-56)||(24273910-24273962)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-56)||(241-296)
[»] chr8 (24 HSPs)
chr8 (1-56)||(16862461-16862516)
chr8 (5-56)||(22819429-22819480)
chr8 (1-59)||(22011521-22011579)
chr8 (5-58)||(21390329-21390382)
chr8 (5-58)||(21779655-21779708)
chr8 (5-57)||(21396850-21396902)
chr8 (5-57)||(21791343-21791395)
chr8 (5-56)||(45131873-45131924)
chr8 (1-58)||(21162965-21163021)
chr8 (5-58)||(21919830-21919883)
chr8 (6-58)||(20047382-20047434)
chr8 (6-58)||(21672804-21672856)
chr8 (5-56)||(5867122-5867173)
chr8 (1-56)||(40493890-40493945)
chr8 (23-58)||(42561469-42561504)
chr8 (4-58)||(20458612-20458666)
chr8 (6-56)||(21668088-21668138)
chr8 (6-56)||(23761758-23761808)
chr8 (6-56)||(24487174-24487224)
chr8 (6-61)||(6519718-6519773)
chr8 (4-56)||(14591911-14591963)
chr8 (5-57)||(23647805-23647856)
chr8 (7-59)||(25749404-25749456)
chr8 (4-56)||(32120615-32120667)
[»] chr6 (32 HSPs)
chr6 (1-56)||(22409148-22409203)
chr6 (1-56)||(31165709-31165764)
chr6 (5-56)||(17803460-17803511)
chr6 (5-58)||(18179699-18179752)
chr6 (5-57)||(16921502-16921554)
chr6 (6-58)||(25687725-25687777)
chr6 (6-58)||(25690272-25690324)
chr6 (6-58)||(25697065-25697117)
chr6 (6-58)||(25721945-25721997)
chr6 (1-56)||(20908821-20908876)
chr6 (1-56)||(20923269-20923324)
chr6 (5-56)||(35244775-35244826)
chr6 (2-54)||(19954445-19954497)
chr6 (1-56)||(19651368-19651423)
chr6 (5-56)||(20592986-20593037)
chr6 (5-56)||(28497349-28497400)
chr6 (5-56)||(29059724-29059775)
chr6 (5-56)||(29809760-29809811)
chr6 (28-58)||(16960938-16960968)
chr6 (6-56)||(22081643-22081692)
chr6 (1-58)||(23082508-23082565)
chr6 (5-58)||(25607365-25607418)
chr6 (29-58)||(27554457-27554486)
chr6 (6-57)||(17230579-17230628)
chr6 (6-58)||(18179393-18179445)
chr6 (28-60)||(18692805-18692837)
chr6 (4-56)||(18897237-18897289)
chr6 (1-57)||(20735497-20735552)
chr6 (1-57)||(23350988-23351044)
chr6 (6-58)||(25957890-25957941)
chr6 (4-56)||(34962253-34962305)
chr6 (1-61)||(35007277-35007337)
[»] chr1 (21 HSPs)
chr1 (1-56)||(22444875-22444930)
chr1 (1-56)||(22450109-22450164)
chr1 (1-56)||(3707864-3707919)
chr1 (5-54)||(17679445-17679494)
chr1 (1-58)||(22434814-22434871)
chr1 (5-57)||(30643649-30643701)
chr1 (1-58)||(21753218-21753275)
chr1 (6-58)||(22236791-22236843)
chr1 (5-56)||(22356278-22356329)
chr1 (5-56)||(22357964-22358015)
chr1 (2-57)||(35983114-35983169)
chr1 (2-56)||(16698652-16698706)
chr1 (1-56)||(3473796-3473851)
chr1 (1-56)||(29765492-29765547)
chr1 (5-56)||(34508956-34509007)
chr1 (6-56)||(12754071-12754121)
chr1 (4-58)||(20240777-20240831)
chr1 (2-54)||(33680164-33680217)
chr1 (28-61)||(49999320-49999353)
chr1 (2-58)||(18274031-18274087)
chr1 (6-58)||(21476795-21476847)
[»] scaffold0451 (1 HSPs)
scaffold0451 (5-58)||(13020-13073)
[»] chr2 (22 HSPs)
chr2 (1-58)||(24704038-24704095)
chr2 (1-56)||(24717378-24717433)
chr2 (5-59)||(19692459-19692513)
chr2 (6-56)||(23110841-23110891)
chr2 (1-54)||(22135078-22135131)
chr2 (1-58)||(25964590-25964647)
chr2 (5-58)||(23066230-23066283)
chr2 (5-58)||(23075680-23075733)
chr2 (6-58)||(23104267-23104319)
chr2 (8-60)||(25347092-25347144)
chr2 (6-57)||(21178231-21178282)
chr2 (1-56)||(22812802-22812856)
chr2 (6-56)||(37317452-37317503)
chr2 (1-56)||(40427666-40427721)
chr2 (5-59)||(19665331-19665384)
chr2 (6-56)||(19819835-19819885)
chr2 (2-56)||(28405165-28405219)
chr2 (5-58)||(20321843-20321896)
chr2 (23-56)||(21083253-21083286)
chr2 (28-57)||(30971918-30971947)
chr2 (5-57)||(23059700-23059752)
chr2 (4-56)||(43948252-43948304)
[»] chr3 (36 HSPs)
chr3 (1-57)||(12936518-12936574)
chr3 (5-56)||(327990-328041)
chr3 (1-56)||(49668950-49669005)
chr3 (6-56)||(32306848-32306898)
chr3 (5-57)||(30025265-30025317)
chr3 (5-57)||(30027748-30027800)
chr3 (2-57)||(12268347-12268402)
chr3 (1-59)||(9512109-9512167)
chr3 (1-59)||(9520084-9520142)
chr3 (4-58)||(14447333-14447386)
chr3 (5-58)||(14577691-14577743)
chr3 (6-55)||(15467050-15467098)
chr3 (1-62)||(31414514-31414575)
chr3 (5-57)||(30023997-30024049)
chr3 (5-57)||(30029017-30029069)
chr3 (1-56)||(12854304-12854359)
chr3 (5-56)||(14571811-14571861)
chr3 (5-56)||(25477261-25477312)
chr3 (6-56)||(1645571-1645621)
chr3 (6-56)||(16096533-16096583)
chr3 (23-57)||(16977790-16977824)
chr3 (4-54)||(17045908-17045958)
chr3 (4-54)||(17048068-17048118)
chr3 (4-54)||(32404996-32405046)
chr3 (2-56)||(49391032-49391086)
chr3 (28-58)||(51694724-51694754)
chr3 (1-54)||(12495457-12495509)
chr3 (21-58)||(14125404-14125441)
chr3 (7-56)||(15463149-15463198)
chr3 (28-56)||(11596025-11596053)
chr3 (5-56)||(14972060-14972112)
chr3 (2-54)||(16102972-16103024)
chr3 (1-57)||(16283783-16283839)
chr3 (1-57)||(16612694-16612750)
chr3 (1-57)||(22046503-22046559)
chr3 (29-57)||(30778106-30778134)
[»] scaffold0036 (1 HSPs)
scaffold0036 (5-56)||(67240-67291)
[»] chr5 (18 HSPs)
chr5 (1-56)||(1859840-1859895)
chr5 (1-58)||(23462054-23462110)
chr5 (5-57)||(17409701-17409753)
chr5 (2-58)||(40724680-40724736)
chr5 (1-56)||(23439184-23439238)
chr5 (1-56)||(23450551-23450605)
chr5 (5-56)||(37723103-37723154)
chr5 (5-58)||(21293848-21293901)
chr5 (5-56)||(19661717-19661768)
chr5 (2-56)||(5890596-5890650)
chr5 (1-55)||(21367532-21367585)
chr5 (29-58)||(20231780-20231809)
chr5 (3-56)||(20571698-20571751)
chr5 (1-58)||(21331157-21331214)
chr5 (1-58)||(27768908-27768965)
chr5 (5-58)||(36448117-36448169)
chr5 (1-56)||(22960424-22960480)
chr5 (5-57)||(24492744-24492795)
[»] chr4 (17 HSPs)
chr4 (1-56)||(16352641-16352696)
chr4 (1-56)||(5339830-5339886)
chr4 (2-57)||(22352655-22352710)
chr4 (23-60)||(40618639-40618676)
chr4 (5-57)||(15243281-15243332)
chr4 (6-62)||(45631499-45631555)
chr4 (6-57)||(12814724-12814775)
chr4 (5-56)||(14054160-14054211)
chr4 (5-56)||(17045686-17045737)
chr4 (6-56)||(12773258-12773308)
chr4 (28-58)||(18223227-18223257)
chr4 (23-56)||(15006922-15006955)
chr4 (3-60)||(15790799-15790856)
chr4 (1-58)||(16349530-16349586)
chr4 (1-54)||(16357818-16357870)
chr4 (1-58)||(17332409-17332466)
chr4 (2-55)||(46641735-46641788)
[»] scaffold0483 (1 HSPs)
scaffold0483 (1-58)||(371-429)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-58)||(45158-45216)
[»] scaffold1459 (1 HSPs)
scaffold1459 (5-58)||(90-143)
[»] scaffold0718 (1 HSPs)
scaffold0718 (5-58)||(5999-6052)
[»] scaffold1061 (1 HSPs)
scaffold1061 (5-57)||(215-267)
[»] scaffold0100 (2 HSPs)
scaffold0100 (1-56)||(24784-24839)
scaffold0100 (5-57)||(16841-16892)
[»] scaffold0012 (1 HSPs)
scaffold0012 (5-56)||(32420-32471)
[»] scaffold0017 (3 HSPs)
scaffold0017 (1-58)||(16059-16116)
scaffold0017 (1-58)||(20581-20638)
scaffold0017 (1-56)||(21712-21767)
[»] scaffold0008 (4 HSPs)
scaffold0008 (5-58)||(84793-84846)
scaffold0008 (6-58)||(70862-70914)
scaffold0008 (6-58)||(78705-78757)
scaffold0008 (1-58)||(79278-79334)
[»] scaffold0628 (2 HSPs)
scaffold0628 (1-57)||(3989-4045)
scaffold0628 (1-57)||(8549-8605)
[»] scaffold0207 (1 HSPs)
scaffold0207 (6-58)||(3547-3599)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-57)||(9116-9171)
scaffold0124 (1-57)||(44785-44841)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-57)||(100710-100766)
scaffold0023 (6-58)||(80392-80444)
[»] scaffold0639 (1 HSPs)
scaffold0639 (5-56)||(7665-7716)
[»] scaffold0622 (1 HSPs)
scaffold0622 (5-56)||(4587-4638)
[»] scaffold0122 (3 HSPs)
scaffold0122 (5-56)||(1282-1333)
scaffold0122 (5-58)||(22522-22575)
scaffold0122 (5-58)||(39595-39647)
[»] scaffold0004 (2 HSPs)
scaffold0004 (5-56)||(316-367)
scaffold0004 (7-57)||(331464-331514)
[»] scaffold0141 (1 HSPs)
scaffold0141 (5-56)||(36523-36576)
[»] scaffold0102 (1 HSPs)
scaffold0102 (6-56)||(18428-18478)
[»] scaffold0049 (1 HSPs)
scaffold0049 (5-56)||(78236-78289)
[»] scaffold0021 (1 HSPs)
scaffold0021 (6-56)||(173964-174014)
[»] scaffold0412 (1 HSPs)
scaffold0412 (1-58)||(14582-14638)
[»] scaffold0161 (1 HSPs)
scaffold0161 (5-58)||(37032-37085)
[»] scaffold0106 (1 HSPs)
scaffold0106 (5-58)||(481-534)
[»] scaffold0556 (1 HSPs)
scaffold0556 (6-58)||(5987-6039)
[»] scaffold0456 (1 HSPs)
scaffold0456 (5-57)||(11296-11348)
[»] scaffold0396 (1 HSPs)
scaffold0396 (6-58)||(486-538)
[»] scaffold0309 (1 HSPs)
scaffold0309 (5-57)||(13081-13133)
[»] scaffold0289 (1 HSPs)
scaffold0289 (1-58)||(1035-1093)
[»] scaffold0185 (1 HSPs)
scaffold0185 (1-56)||(32751-32807)
[»] scaffold0933 (1 HSPs)
scaffold0933 (1-59)||(4024-4082)
[»] scaffold0500 (2 HSPs)
scaffold0500 (1-56)||(10069-10124)
scaffold0500 (28-56)||(329-357)
[»] scaffold0333 (1 HSPs)
scaffold0333 (1-56)||(5760-5814)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-56)||(1009-1064)
scaffold0083 (1-56)||(6313-6368)
[»] scaffold0080 (1 HSPs)
scaffold0080 (5-56)||(39136-39187)
[»] scaffold0064 (1 HSPs)
scaffold0064 (5-56)||(46194-46245)
[»] scaffold0063 (2 HSPs)
scaffold0063 (6-57)||(42861-42912)
scaffold0063 (6-56)||(39392-39442)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-56)||(57866-57920)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-56)||(22405-22459)
[»] scaffold0028 (4 HSPs)
scaffold0028 (5-56)||(40385-40436)
scaffold0028 (6-58)||(12703-12756)
scaffold0028 (6-58)||(22231-22284)
scaffold0028 (6-61)||(6175-6231)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-56)||(195784-195839)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-58)||(22524-22579)
[»] scaffold0001 (2 HSPs)
scaffold0001 (3-58)||(496641-496696)
scaffold0001 (28-61)||(423405-423438)
[»] scaffold0354 (1 HSPs)
scaffold0354 (6-56)||(7058-7108)
[»] scaffold0848 (1 HSPs)
scaffold0848 (5-58)||(4017-4070)
[»] scaffold0598 (1 HSPs)
scaffold0598 (5-54)||(1878-1927)
[»] scaffold0577 (1 HSPs)
scaffold0577 (4-57)||(5535-5588)
[»] scaffold0490 (1 HSPs)
scaffold0490 (5-58)||(1146-1199)
[»] scaffold0450 (1 HSPs)
scaffold0450 (6-59)||(2491-2544)
[»] scaffold0431 (1 HSPs)
scaffold0431 (6-58)||(11618-11671)
[»] scaffold0395 (1 HSPs)
scaffold0395 (5-58)||(15544-15596)
[»] scaffold0228 (2 HSPs)
scaffold0228 (5-58)||(21204-21257)
scaffold0228 (28-56)||(19474-19502)
[»] scaffold0079 (2 HSPs)
scaffold0079 (1-54)||(22868-22920)
scaffold0079 (1-58)||(37695-37751)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-54)||(340841-340890)
[»] scaffold2112 (1 HSPs)
scaffold2112 (6-58)||(827-879)
[»] scaffold1351 (1 HSPs)
scaffold1351 (1-53)||(851-903)
[»] scaffold0621 (2 HSPs)
scaffold0621 (6-58)||(1269-1321)
scaffold0621 (6-58)||(5686-5738)
[»] scaffold0347 (1 HSPs)
scaffold0347 (7-63)||(8045-8101)
[»] scaffold0293 (1 HSPs)
scaffold0293 (28-56)||(10146-10174)
[»] scaffold0284 (1 HSPs)
scaffold0284 (28-56)||(18014-18042)
[»] scaffold0278 (1 HSPs)
scaffold0278 (6-58)||(4803-4855)
[»] scaffold0158 (1 HSPs)
scaffold0158 (1-56)||(2075-2130)
[»] scaffold0138 (1 HSPs)
scaffold0138 (4-56)||(18947-18999)
[»] scaffold0120 (1 HSPs)
scaffold0120 (5-57)||(18211-18262)
[»] scaffold0044 (1 HSPs)
scaffold0044 (5-56)||(12114-12165)
[»] scaffold0019 (1 HSPs)
scaffold0019 (28-60)||(169223-169255)


Alignment Details
Target: scaffold0280 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 5632 - 5796
Alignment:
Q  59 aacctttgaggagtaccaaaatctttgtgtcctatacattaccaccctatttggaaagatcaaggagtgtgagcatgaaataacaattttgaaagataat 158  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5632 aacctttaaggagtaccaaaatctttgtgtcctatacattaccaccctatttggaaagatcaaggagtgtgagcatgaaataacaattttgaaagataat 5731  T
Q  159 gagaaaaatatttagaaaacagagaagaaattcattgcgttaaatgcctcttaatcaaaggaaac 223  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  5732 gagaaaaatatttagaaaacaaagaagaaattcatcgcgttaaatgcctcttaatcaaaggaaac 5796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23219 - 23277
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatatt-ggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  23219 atgattactctgattatatgtttgaaatttttatgttgggaaaaacggggtgttacaat 23277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2759394 - 2759337
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  2759394 atgattactctgattatatgtttgaaatttttatattgggaaaacggggtgttacaat 2759337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 13636277 - 13636328
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13636277 ttactctgattatatgtttgaaatttttatattggaaaaacggggtgttaca 13636328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 9034217 - 9034271
Alignment:
Q  3 gattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||||| | | |||| ||||||||||||||||||||||||||||||    
T  9034217 gattactctgattatttatatgaaatttttatattggaaaaacggggtgttacaa 9034271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3271125 - 3271066
Alignment:
Q  1 atgattactctgatt--atatgtttgaattttttatattggaaaaacggggtgttacaata 59  Q
    |||||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  3271125 atgattactctgatttaatatgtt-gaaatttttatattggaaaaacggggtgttacaata 3271066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 4500481 - 4500585
Alignment:
Q  106 tatttggaaagatcaaggagtgtgagcatgaaataacaattttgaaagataatgagaaaaatatttagaaaacagagaagaaattcattgcgttaaatgc 205  Q
    ||||||||||| |||||||   |||||||||||| ||||  ||||||| || |||||||||| || |||| |  |||||||| ||||| || ||||| ||    
T  4500481 tatttggaaagctcaaggaacatgagcatgaaatgacaaggttgaaagttagtgagaaaaatgttaagaagaaggagaagaagttcatcgcattaaaagc 4500580  T
Q  206 ctctt 210  Q
    |||||    
T  4500581 ctctt 4500585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 9391126 - 9391178
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  9391126 attactctgataatatgtttgaaatttttaagttgggaaaacggggtgttaca 9391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 13773164 - 13773104
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaataacc 62  Q
    |||||||||||||||| |   |||| ||||||| |||| ||||||||||||||||||||||    
T  13773164 tgattactctgattatttaaatgaaatttttatgttgggaaaacggggtgttacaataacc 13773104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 11769779 - 11769830
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||| | | |||| ||||||| |||||||||||||||||||||    
T  11769779 ttactctgattatttatatgaaatttttatgttggaaaaacggggtgttaca 11769830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 19158919 - 19158974
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||| ||||||||||| ||||||  |||| |||| ||||||||||||    
T  19158919 tgattactctgataatatgtttgaaatttttaagttgggaaaatggggtgttacaa 19158974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 20758318 - 20758373
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||| ||||||||||| ||||||  |||| |||| ||||||||||||    
T  20758318 tgattactctgataatatgtttgaaatttttaagttgggaaaatggggtgttacaa 20758373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 11773106 - 11773156
Alignment:
Q  7 actctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||| | | |||| |||||||||||| |||||||||||||||||    
T  11773106 actctgattatttatatgaaatttttatattgggaaaacggggtgttacaa 11773156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 15082518 - 15082468
Alignment:
Q  7 actctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||| | |||||| ||||||| |||| |||||||||||||||||    
T  15082518 actctgattatttttttgaaatttttatgttgggaaaacggggtgttacaa 15082468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 23969789 - 23969839
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||| | | |||| ||||||| |||||||||||||||||||||    
T  23969789 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttaca 23969839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 44013399 - 44013349
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  44013399 tactctgataatatgtttgaaatttttaagttgggaaaacggggtgttaca 44013349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 1860780 - 1860829
Alignment:
Q  7 actctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||| | | |||| |||||||||||| ||||||||||||||||    
T  1860780 actctgattatttttatgaaatttttatattgggaaaacggggtgttaca 1860829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 12128691 - 12128744
Alignment:
Q  3 gattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||| | | |||| ||||||| |||| ||||||||||||||||    
T  12128691 gattactctgattatttttatgaaatttttatgttgggaaaacggggtgttaca 12128744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 13920369 - 13920418
Alignment:
Q  7 actctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||| | | |||| |||||||||||| ||||||||||||||||    
T  13920369 actctgattatttttatgaaatttttatattgggaaaacggggtgttaca 13920418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 16997552 - 16997495
Alignment:
Q  3 gattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaataa 60  Q
    ||||||||||||||| |   |||| ||||||| |||| ||||||||||||||||||||    
T  16997552 gattactctgattatttaaatgaaatttttatgttgggaaaacggggtgttacaataa 16997495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 27848659 - 27848712
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||| || ||||||   ||||||||||||| ||||||||    
T  27848659 ttactctgattatatgtttaaaatttttaagctggaaaaacggggcgttacaat 27848712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 13850870 - 13850922
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| | | |||| ||||||| |||| ||||||||||||||||    
T  13850870 attactctgattatttttatgaaatttttatgttgggaaaacggggtgttaca 13850922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 24273962 - 24273910
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| | | |||| ||||||| |||| ||||||||||||||||    
T  24273962 attactctgattatctttatgaaatttttatcttgggaaaacggggtgttaca 24273910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 241 - 296
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  241 atgattactctgattatatgtttgaaatttttatattgggaaaacggggtgttaca 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16862461 - 16862516
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  16862461 atgattactctgattatatgtttgaaattttcatattggaaaaacggggtgttaca 16862516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 22819480 - 22819429
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22819480 ttactctgattatatgtttgaaatttttatattggaaaaacggggtgttaca 22819429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22011521 - 22011579
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaata 59  Q
    ||||||||||||||| |||||||||| |||||||||| | |||||||||||||||||||    
T  22011521 atgattactctgattctatgtttgaaatttttatattaggaaaacggggtgttacaata 22011579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 21390329 - 21390382
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  21390329 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 21390382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 21779655 - 21779708
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  21779655 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 21779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 21396850 - 21396902
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  21396850 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaa 21396902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 21791343 - 21791395
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  21791343 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaa 21791395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 45131873 - 45131924
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  45131873 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 45131924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21162965 - 21163021
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||| ||||||| ||| ||||||| |||| ||||||||||||||||||    
T  21162965 atgattactctgataatatgtt-gaaatttttatgttgggaaaacggggtgttacaat 21163021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 21919830 - 21919883
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||| ||||||||||| ||||||  |||| ||||||||||||||||||    
T  21919830 ttactctgataatatgtttgaaatttttaagttgggaaaacggggtgttacaat 21919883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 20047382 - 20047434
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| | | |||| ||||||| |||||||||||||||||||||||    
T  20047382 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttacaat 20047434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 21672856 - 21672804
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| ||||||||||| ||||||  |||| ||||||||||||||||||    
T  21672856 tactctgataatatgtttgaaatttttaagttgggaaaacggggtgttacaat 21672804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 5867122 - 5867173
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| |||||| |||||||||    
T  5867122 ttactctgattatatgtttgaaatttttaagttgggaaaacgaggtgttaca 5867173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40493890 - 40493945
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||||| | | |||| ||||||| |||| ||||||||||||||||    
T  40493890 atgattactctgattatttatatgaagtttttatgttgggaaaacggggtgttaca 40493945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 42561469 - 42561504
Alignment:
Q  23 tgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||| |||||||||||||||||||||||||||||||    
T  42561469 tgaaatttttatattggaaaaacggggtgttacaat 42561504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 20458666 - 20458612
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||| | | |||| ||||||  |||||||||||||||||||||||    
T  20458666 attactctgattatttttatgaaatttttacgttggaaaaacggggtgttacaat 20458612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 21668138 - 21668088
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  21668138 tactctgataatatgtttgaaatttttaagttgggaaaacggggtgttaca 21668088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 23761758 - 23761808
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||| ||||||||||| ||| |||||||| ||||||| ||||||||    
T  23761758 tactctgataatatgtttgaaatttatatattgggaaaacggagtgttaca 23761808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 24487174 - 24487224
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||| | | |||| ||||||| |||||||||||||||||||||    
T  24487174 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttaca 24487224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 6519773 - 6519718
Alignment:
Q  6 tactctgattatatgtttgaattttttatattgg-aaaaacggggtgttacaataac 61  Q
    ||||||||| ||||||||||| ||||||  |||| ||||||||||||||||||||||    
T  6519773 tactctgat-atatgtttgaaatttttaagttgggaaaaacggggtgttacaataac 6519718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 14591963 - 14591911
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| | | |||| ||||||| |||||| ||||||||||||||    
T  14591963 attactctgattatctttatgaaatttttatcttggaagaacggggtgttaca 14591911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 23647856 - 23647805
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||| |||||||| ||||||  |||| |||||||||||||||||    
T  23647856 ttactctgattat-tgtttgaaatttttaagttgggaaaacggggtgttacaa 23647805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 25749404 - 25749456
Alignment:
Q  7 actctgattatatgtttgaattttttatattggaaaaacggggtgttacaata 59  Q
    ||||||||||| | | |||| ||||||| |||| |||||||||||||||||||    
T  25749404 actctgattatttttatgaaatttttatgttgggaaaacggggtgttacaata 25749456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 32120667 - 32120615
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| | | |||| ||||||| |||| ||||||||||||||||    
T  32120667 attactctgattatctttatgaaatttttatcttgggaaaacggggtgttaca 32120615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22409148 - 22409203
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  22409148 atgattactctgattatatgtttgaaatttttatattgggaaaacggggtgttaca 22409203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31165709 - 31165764
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  31165709 atgattactctgattatatgtttgaaatttttatattggaaaaatggggtgttaca 31165764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 17803511 - 17803460
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  17803511 ttactctgattatatgtttgaaatttttatattgggaaaacggggtgttaca 17803460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 18179752 - 18179699
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||| | |||||||||||| |||||| |||||||||||    
T  18179752 ttactctgattatatgtttgtaatttttatattgggaaaacgaggtgttacaat 18179699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 16921502 - 16921554
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  16921502 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaa 16921554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 25687777 - 25687725
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  25687777 tactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 25687725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 25690324 - 25690272
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  25690324 tactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 25690272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 25697117 - 25697065
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  25697117 tactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 25697065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 25721997 - 25721945
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  25721997 tactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 25721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20908821 - 20908876
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| ||   |||||| |||||||||||||||||||||||||||||    
T  20908821 atgattactctgataattgttttgaaatttttatattggaaaaacggggtgttaca 20908876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20923269 - 20923324
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| ||   |||||| |||||||||||||||||||||||||||||    
T  20923269 atgattactctgataattgttttgaaatttttatattggaaaaacggggtgttaca 20923324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 35244826 - 35244775
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  35244826 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 35244775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 19954445 - 19954497
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    ||||||||||||| ||||||||||| ||||||  |||| ||||||||||||||    
T  19954445 tgattactctgataatatgtttgaaatttttaagttgggaaaacggggtgtta 19954497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19651423 - 19651368
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||| ||||||||||||||||||||| ||||||  |||||||||  ||||||||||    
T  19651423 atgaatactctgattatatgtttgaaatttttaagttggaaaaatagggtgttaca 19651368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 20593037 - 20592986
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  20593037 ttactctgataatatgtttgaaatttttaagttgggaaaacggggtgttaca 20592986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 28497349 - 28497400
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| |||||||| |||||||    
T  28497349 ttactctgattatatgtttgaaatttttaagttgggaaaacgggatgttaca 28497400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 29059775 - 29059724
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||| ||||||||||| ||||||  ||| |||||||||||||||||    
T  29059775 ttactctgataatatgtttgaaatttttaagttgaaaaaacggggtgttaca 29059724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 29809760 - 29809811
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| |||||||| |||||||    
T  29809760 ttactctgattatatgtttgaaatttttaagttgggaaaacgggatgttaca 29809811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 16960938 - 16960968
Alignment:
Q  28 tttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||||||||||||    
T  16960938 tttttatattggaaaaacggggtgttacaat 16960968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 22081643 - 22081692
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||| ||||||||||| ||||||  |||||||||||||||||||||    
T  22081643 tactctgat-atatgtttgaaatttttaagttggaaaaacggggtgttaca 22081692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23082565 - 23082508
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||| ||  |||| ||||||| |||| |||||| |||||||||||    
T  23082565 atgattactctgattatttgaatgaaatttttatgttgggaaaacgaggtgttacaat 23082508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 25607365 - 25607418
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||||  ||| |  |||| ||||||||||||||||||    
T  25607365 ttactctgattatatgtttgaaaatttcaagttgggaaaacggggtgttacaat 25607418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 27554457 - 27554486
Alignment:
Q  29 ttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||||||||||||    
T  27554457 ttttatattggaaaaacggggtgttacaat 27554486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 17230579 - 17230628
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||||||  ||| ||||||| |||| |||||||||||||||||    
T  17230579 tactctgattatatgt--gaaatttttatgttgggaaaacggggtgttacaa 17230628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 18179445 - 18179393
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| | | |||| ||||||| |||| ||||||||||||||||||    
T  18179445 tactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaat 18179393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 18692805 - 18692837
Alignment:
Q  28 tttttatattggaaaaacggggtgttacaataa 60  Q
    ||||||| |||||||||||||||||||||||||    
T  18692805 tttttatgttggaaaaacggggtgttacaataa 18692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 18897237 - 18897289
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| | | |||| ||||||  |||||||||||||||||||||    
T  18897237 attactctgattatttttatgaaatttttaagttggaaaaacggggtgttaca 18897289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20735497 - 20735552
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||| ||||||||| | | |||| ||||||| ||||||||||||||||||||||    
T  20735497 atgattattctgattattt-tatgaaatttttatgttggaaaaacggggtgttacaa 20735552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23351044 - 23350988
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||| |||||||||||| |   |||| ||||||| ||||||||||||||||||||||    
T  23351044 atgaatactctgattatttaaatgaaatttttatgttggaaaaacggggtgttacaa 23350988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 25957890 - 25957941
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| ||||||||||| ||||||  |||| ||||||||||||||||||    
T  25957890 tactctgat-atatgtttgaaatttttaagttgggaaaacggggtgttacaat 25957941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 34962305 - 34962253
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| | | |||| ||||||| |||| ||||||||||||||||    
T  34962305 attactctgattatctttatgaaatttttatcttgggaaaacggggtgttaca 34962253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35007337 - 35007277
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaataac 61  Q
    ||||||||||||||||| ||  |||| ||||||| | || |||||||||||||||| ||||    
T  35007337 atgattactctgattatttgaatgaaatttttatgtggggaaaacggggtgttacactaac 35007277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22444875 - 22444930
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  22444875 atgattactctgattatatgtttgaaatttttatattgggaaaacggggtgttaca 22444930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22450109 - 22450164
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  22450109 atgattactctgattatatgtttgaaatttttatattgggaaaacggggtgttaca 22450164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3707864 - 3707919
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| |||||||||    
T  3707864 atgattactctgattatatgtttgaaatttttatattgggaaaacgaggtgttaca 3707919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 17679445 - 17679494
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  17679445 ttactctgattatatgtttgaaatttttatattgggaaaacggggtgtta 17679494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22434814 - 22434871
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||||||| ||||||| ||||  |||||||||||||||||    
T  22434814 atgattactctgattatatgtttgaaatttttatgttgggtaaacggggtgttacaat 22434871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30643701 - 30643649
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  30643701 ttactctgattatatgtttgaaatttttatattgggaaaacagggtgttacaa 30643649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21753275 - 21753218
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||| ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  21753275 atgaatactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 21753218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 22236843 - 22236791
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  22236843 tactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 22236791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 22356278 - 22356329
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  22356278 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 22356329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 22357964 - 22358015
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  22357964 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 22358015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 35983114 - 35983169
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||| ||||||||||| ||||||  |||| |||||||||||||||||    
T  35983114 tgattactctgataatatgtttgaaatttttaagttgggaaaacggggtgttacaa 35983169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 16698652 - 16698706
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  16698652 tgattactctgataatatgtttgaaatttttaagttgggaaaacggggtgttaca 16698706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3473796 - 3473851
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatatt-ggaaaaacggggtgttaca 56  Q
    |||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||    
T  3473796 atgattactctgataatatg-ttgaaatttttatattgggaaaaacggggtgttaca 3473851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29765492 - 29765547
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||||| |   |||| |||||||||||| ||||||||||||||||    
T  29765492 atgattactctgattattttaatgaaatttttatattgggaaaacggggtgttaca 29765547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 34509007 - 34508956
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  34509007 ttactctgataatatgtttgaactttttaagttgggaaaacggggtgttaca 34508956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 12754121 - 12754071
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||| | | |||| ||||||| |||||||||||||||||||||    
T  12754121 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttaca 12754071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 20240831 - 20240777
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||| | | |||| ||||||| |||| ||||||||||||||||||    
T  20240831 attactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaat 20240777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 33680217 - 33680164
Alignment:
Q  2 tgattactctgattatatgttt-gaattttttatattggaaaaacggggtgtta 54  Q
    ||||||||||||| |||||||| ||| ||||||| |||| ||||||||||||||    
T  33680217 tgattactctgataatatgttttgaaatttttatgttgggaaaacggggtgtta 33680164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 49999353 - 49999320
Alignment:
Q  28 tttttatattggaaaaacggggtgttacaataac 61  Q
    |||||||||||| |||||||||||||||||||||    
T  49999353 tttttatattgggaaaacggggtgttacaataac 49999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18274087 - 18274031
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||| |   |||| ||||||| |||| ||||||||||||||||||    
T  18274087 tgattactctgattatttagatgaaatttttatgttgggaaaacggggtgttacaat 18274031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 21476847 - 21476795
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| | | |||| ||||||| |||| ||||||||||||||||||    
T  21476847 tactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaat 21476795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 13020 - 13073
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  13020 ttactctgattatatgtttgaaatttttatattgggaaaacggggtgttacaat 13073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24704038 - 24704095
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  24704038 atgattactctgattatatgtttgaaatttttatgttgggaaaacggggtgttacaat 24704095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24717378 - 24717433
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  24717378 atgattactctgattatatgtttgaaatttttatgttgggaaaacggggtgttaca 24717433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 19692459 - 19692513
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaata 59  Q
    |||||||||||||||||||||| |||||||||||| ||||||  |||||||||||    
T  19692459 ttactctgattatatgtttgaaatttttatattgggaaaacgacgtgttacaata 19692513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 23110841 - 23110891
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  23110841 tactctgattatatgtttgaaatttttatgttgggaaaacggggtgttaca 23110891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22135078 - 22135131
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||||||||||||||||||| ||||||  |||| ||||||||||||||    
T  22135078 atgattactctgattatatgtttgaaatttttaagttgggaaaacggggtgtta 22135131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25964590 - 25964647
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattgg-aaaaacggggtgttacaat 58  Q
    |||||||||||||| ||||||| ||| |||||||||||| |||||||||||||||||||    
T  25964590 atgattactctgataatatgtt-gaaatttttatattgggaaaaacggggtgttacaat 25964647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 23066283 - 23066230
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| |||||||||||| ||||||  |||| ||||||||||||||||||    
T  23066283 ttactctgaatatatgtttgaaatttttaagttgggaaaacggggtgttacaat 23066230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 23075733 - 23075680
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| |||||||||||| ||||||  |||| ||||||||||||||||||    
T  23075733 ttactctgaatatatgtttgaaatttttaagttgggaaaacggggtgttacaat 23075680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 23104267 - 23104319
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||| ||||||  |||| |||| |||||||||||||    
T  23104267 tactctgattatatgtttgaaatttttaagttgggaaaagggggtgttacaat 23104319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 25347092 - 25347144
Alignment:
Q  8 ctctgattatatgtttgaattttttatattggaaaaacggggtgttacaataa 60  Q
    |||||||||| | | |||| |||||||||||| ||||||||||||||||||||    
T  25347092 ctctgattatttttatgaaatttttatattgggaaaacggggtgttacaataa 25347144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 21178231 - 21178282
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||| | | |||| ||||||| ||||||||||||||||||||||    
T  21178231 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttacaa 21178282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22812802 - 22812856
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| ||||||| ||| |||||||||||| |||| |||||||||||    
T  22812802 atgattactctgataatatgtt-gaaatttttatattgggaaaatggggtgttaca 22812856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 37317503 - 37317452
Alignment:
Q  6 tactctgattatatgttt-gaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||| | |||||| ||| |||||||||||||||||||||||||||||    
T  37317503 tactctgataaaatgtttagaaatttttatattggaaaaacggggtgttaca 37317452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40427721 - 40427666
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| ||   |||||| |||||||||||| ||||||||||||||||    
T  40427721 atgattactctgataattgttttgaaatttttatattgggaaaacggggtgttaca 40427666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 19665331 - 19665384
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaata 59  Q
    |||||||||||| || | |||| ||||||| ||||||||||||||||||||||||    
T  19665331 ttactctgatta-atttatgaaatttttatgttggaaaaacggggtgttacaata 19665384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 19819885 - 19819835
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||| |||||||||||||||| ||||||  |||| ||||||||||||||||    
T  19819885 tactgtgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 19819835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 28405219 - 28405165
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| || ||||||  |||||||||| | ||||||||    
T  28405219 tgattactctgattatatgtttaaaatttttaagttggaaaaacagagtgttaca 28405165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 20321896 - 20321843
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| ||| ||||| ||||||  |||| ||||||||||||||||||    
T  20321896 ttactctgattacatgattgaaatttttaagttgggaaaacggggtgttacaat 20321843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 21083253 - 21083286
Alignment:
Q  23 tgaattttttatattggaaaaacggggtgttaca 56  Q
    |||| |||||||||||||||||||||||||||||    
T  21083253 tgaaatttttatattggaaaaacggggtgttaca 21083286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 30971918 - 30971947
Alignment:
Q  28 tttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||||||||||||||||||||    
T  30971918 tttttatattggaaaaacggggtgttacaa 30971947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 23059752 - 23059700
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||| ||||| |||||| ||||||  |||| |||||||||||||||||    
T  23059752 ttactctgaatatatatttgaaatttttaagttgggaaaacggggtgttacaa 23059700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 43948252 - 43948304
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| | | |||| ||||||| |||| ||||||||||||||||    
T  43948252 attactctgattatttatatgaaatttttatgttgggaaaacggggtgttaca 43948304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12936518 - 12936574
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  12936518 atgattactctgattatatgtttgaaatttttaagttggaaaaacggggtgttacaa 12936574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 327990 - 328041
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||||||||    
T  327990 ttactctgattatatgtttgaaatttttatattaggaaaacggggtgttaca 328041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49668950 - 49669005
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||| |||||||||||||| ||||||  |||||||||||||||||||||    
T  49668950 atgattactcttattatatgtttgaaatttttaagttggaaaaacggggtgttaca 49669005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 32306898 - 32306848
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  32306898 tactctgattatatgtttgaaatttttaagttggaaaaacggggtgttaca 32306848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30025317 - 30025265
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  30025317 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaa 30025265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30027800 - 30027748
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  30027800 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaa 30027748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 12268402 - 12268347
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||| ||||||||||| ||||||  |||| |||||||||||||||||    
T  12268402 tgattactctgataatatgtttgaaatttttaagttgggaaaacggggtgttacaa 12268347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9512167 - 9512109
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaata 59  Q
    |||||||||||||||||||||||||| ||||||  |||| ||||||| |||||| ||||    
T  9512167 atgattactctgattatatgtttgaaatttttaagttgggaaaacggagtgttaaaata 9512109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9520142 - 9520084
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaata 59  Q
    |||||||||||||||||||||||||| ||||||  |||| ||||||| |||||| ||||    
T  9520142 atgattactctgattatatgtttgaaatttttaagttgggaaaacggagtgttaaaata 9520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 14447386 - 14447333
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||| ||||||| |||  ||||||||||||||||||||||||||||||    
T  14447386 attactctgataatatgtt-gaaaattttatattggaaaaacggggtgttacaat 14447333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 14577691 - 14577743
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||    
T  14577691 ttactctgat-atatgtttgaaatttttatgttgggaaaacggggtgttacaat 14577743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 15467098 - 15467050
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttac 55  Q
    ||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  15467098 tactctgat-atatgtttgaaatttttatattggaaaaatggggtgttac 15467050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31414575 - 31414514
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaataacc 62  Q
    ||||||||||||||||| ||  |||| ||||||| |||| ||||||||||||||||| ||||    
T  31414575 atgattactctgattatttgaatgaaatttttatgttgggaaaacggggtgttacaaaaacc 31414514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30024049 - 30023997
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| ||||||  |||| |||||| ||||||||||    
T  30024049 ttactctgattatatgtttgaaatttttaagttgggaaaacgaggtgttacaa 30023997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30029069 - 30029017
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| ||||||  |||  |||||||||||||||||    
T  30029069 ttactctgattatatgtttgaaatttttaagttgtgaaaacggggtgttacaa 30029017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12854304 - 12854359
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||| |||||||||||| | | |||| ||||||| |||||||||||||||||||||    
T  12854304 atgaatactctgattatttttatgaaatttttatgttggaaaaacggggtgttaca 12854359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 14571861 - 14571811
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||| ||||||||||| ||||||| |||| ||||||||||||||||    
T  14571861 ttactctgat-atatgtttgaaatttttatgttgggaaaacggggtgttaca 14571811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 25477261 - 25477312
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||||||| || ||||||  |||| ||||||||||||||||    
T  25477261 ttactctgattatatgtttaaaatttttaagttgggaaaacggggtgttaca 25477312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 1645571 - 1645621
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||||||||| ||||||  |||| |||||||||| |||||    
T  1645571 tactctgattatatgtttgaaatttttaagttgggaaaacggggttttaca 1645621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 16096583 - 16096533
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  16096583 tactctgataatatgtttgaaatttttaagttgggaaaacggggtgttaca 16096533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 16977824 - 16977790
Alignment:
Q  23 tgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||| ||||||||||||||||||||||||||||||    
T  16977824 tgaaatttttatattggaaaaacggggtgttacaa 16977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 17045958 - 17045908
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||||||| | | |||| |||||||||||| ||||||||||||||    
T  17045958 attactctgattatttttatgaaatttttatattgggaaaacggggtgtta 17045908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 17048118 - 17048068
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||||||| | | |||| |||||||||||| ||||||||||||||    
T  17048118 attactctgattatttttatgaaatttttatattgggaaaacggggtgtta 17048068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 32404996 - 32405046
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||||||| | | |||| ||||||| |||||||||||||||||||    
T  32404996 attactctgattatttttatgaaatttttatgttggaaaaacggggtgtta 32405046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 49391032 - 49391086
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||| ||||||||||| ||||||  |||  ||||||||||||||||    
T  49391032 tgattactctgataatatgtttgaaatttttaagttgagaaaacggggtgttaca 49391086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 51694754 - 51694724
Alignment:
Q  28 tttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||||||||||||    
T  51694754 tttttatattggaaaaacggggtgttacaat 51694724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12495509 - 12495457
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||||||| ||||||| |||  ||||||||||| ||||||||||||||    
T  12495509 atgattactctgataatatgtt-gaaaattttatattgggaaaacggggtgtta 12495457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 14125404 - 14125441
Alignment:
Q  21 tttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  14125404 tttgaaatttttatattgggaaaacggggtgttacaat 14125441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 15463198 - 15463149
Alignment:
Q  7 actctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||| | | |||| |||||||||||| ||||||||||||||||    
T  15463198 actctgattatttttatgaaatttttatattgggaaaacggggtgttaca 15463149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 11596025 - 11596053
Alignment:
Q  28 tttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||||||    
T  11596025 tttttatattggaaaaacggggtgttaca 11596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 14972112 - 14972060
Alignment:
Q  5 ttactctgattatatgtttgaattttttatatt-ggaaaaacggggtgttaca 56  Q
    |||||||||| ||||||||||| ||||||  || |||||||||||||||||||    
T  14972112 ttactctgataatatgtttgaaatttttaagttgggaaaaacggggtgttaca 14972060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 16103024 - 16102972
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    ||||||||||||| ||||||||||| ||||||  |||| ||| ||||||||||    
T  16103024 tgattactctgataatatgtttgaaatttttaagttgggaaatcggggtgtta 16102972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16283783 - 16283839
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||| |||||||||||| | | |||| ||||||| |||| |||||||||||||||||    
T  16283783 atgaatactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaa 16283839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16612750 - 16612694
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||||||| |   |||||||||||| |||| ||||||||||| |||||    
T  16612750 atgattactctgattatttaaatgaattttttatgttgggaaaacggggtgctacaa 16612694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22046503 - 22046559
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||||||| |   |||||||||||| |||| ||||||||||| |||||    
T  22046503 atgattactctgattatttaaatgaattttttatgttgggaaaacggggtgctacaa 22046559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Original strand, 30778106 - 30778134
Alignment:
Q  29 ttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||||||||||    
T  30778106 ttttatattggaaaaacggggtgttacaa 30778134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 67240 - 67291
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  67240 ttactctgattatatgtttgaaatttttatattgggaaaacggggtgttaca 67291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1859840 - 1859895
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  1859840 atgattactctgattatatgcttgaaatttttatattgggaaaacggggtgttaca 1859895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23462110 - 23462054
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||||    
T  23462110 atgattactctgatt-tatgtttgaaatttttatattgggaaaacagggtgttacaat 23462054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 17409753 - 17409701
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||| ||| |||||||||||| |||| ||||||||||||    
T  17409753 ttactctgattatatgttcgaaatttttatattgggaaaatggggtgttacaa 17409701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 40724736 - 40724680
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||| ||||||||||| ||||||  |||| ||||||||||||||||||    
T  40724736 tgattactctgataatatgtttgaaatttttaagttgggaaaacggggtgttacaat 40724680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23439238 - 23439184
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||    
T  23439238 atgattactctcatt-tatgtttgaaatttttatattgggaaaacggggtgttaca 23439184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23450605 - 23450551
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||    
T  23450605 atgattactctcatt-tatgtttgaaatttttatattgggaaaacggggtgttaca 23450551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 37723154 - 37723103
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  37723154 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 37723103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 21293848 - 21293901
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||| ||||||  |||| ||||||| ||||||||||    
T  21293848 ttactctgattatatgtttgaaatttttaagttgggaaaacggagtgttacaat 21293901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 19661717 - 19661768
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| |||| |||||||||||    
T  19661717 ttactctgattatatgtttgaaatttttaagttgggaaaatggggtgttaca 19661768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 5890596 - 5890650
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||| ||||||||||| ||||||  |||| |||| |||||||||||    
T  5890596 tgattactctgataatatgtttgaaatttttaagttgggaaaatggggtgttaca 5890650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21367532 - 21367585
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttac 55  Q
    |||||||||||||| ||||||| |||  ||||||||||| |||||||||||||||    
T  21367532 atgattactctgataatatgtt-gaaaattttatattgggaaaacggggtgttac 21367585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 20231809 - 20231780
Alignment:
Q  29 ttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||||||||||||    
T  20231809 ttttatattggaaaaacggggtgttacaat 20231780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 20571751 - 20571698
Alignment:
Q  3 gattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||| | | |||| ||||||| |||| ||||||||||||||||    
T  20571751 gattactctgattatttatatgaaatttttatgttgggaaaacggggtgttaca 20571698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21331157 - 21331214
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||| |||||||||||| | | |||| ||||||| |||| ||||||||||||||||||    
T  21331157 atgaatactctgattatttatatgaaatttttatgttgggaaaacggggtgttacaat 21331214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27768908 - 27768965
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||| |   |||| ||||||  |||||||||||||||||||||||    
T  27768908 atgattactctgattattttaatgaaatttttacgttggaaaaacggggtgttacaat 27768965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 36448169 - 36448117
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| || | |||| |||||||||||| ||||||||||||||||||    
T  36448169 ttactctgatta-atttatgaaatttttatattgggaaaacggggtgttacaat 36448117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22960424 - 22960480
Alignment:
Q  1 atgattactctgatt-atatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||| |||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  22960424 atgaatactctgatttatatgtttgaaatttttaagttgggaaaacggggtgttaca 22960480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 24492795 - 24492744
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||| |||||||| ||||||  |||| |||||||||||||||||    
T  24492795 ttactctgattat-tgtttgaaatttttaagttgggaaaacggggtgttacaa 24492744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16352641 - 16352696
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  16352641 atgattactctgattatatgtttgaaatttttatgttgggaaaacggggtgttaca 16352696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5339830 - 5339886
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattgg-aaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  5339830 atgattactctgattatatgtttgaaatttttatgttggaaaaaacggggtgttaca 5339886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 22352710 - 22352655
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||| ||||||||||| ||||||  |||| |||||||||||||||||    
T  22352710 tgattactctgataatatgtttgaaatttttaagttgggaaaacggggtgttacaa 22352655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 40618676 - 40618639
Alignment:
Q  23 tgaattttttatattggaaaaacggggtgttacaataa 60  Q
    |||| |||||||||||||||||||||||||||||||||    
T  40618676 tgaaatttttatattggaaaaacggggtgttacaataa 40618639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 15243281 - 15243332
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||||| | |||| ||||||| ||||||||||||||||||||||    
T  15243281 ttactctgattatat-tatgaaatttttatgttggaaaaacggggtgttacaa 15243332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 45631555 - 45631499
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaataacc 62  Q
    |||||||||||| | | |||| ||||||| ||||||||||||||||||||| |||||    
T  45631555 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttacattaacc 45631499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 12814775 - 12814724
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||| | |||||| ||||||| |||| |||||||||||||||||    
T  12814775 tactctgattatttttttgaaatttttatgttgggaaaacggggtgttacaa 12814724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 14054160 - 14054211
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||||||||||  ||||||||    
T  14054160 ttactctgattatatgtttgaaatttttaagttggaaaaacgaagtgttaca 14054211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 17045737 - 17045686
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| |||| |  |||| ||||||||||||||||    
T  17045737 ttactctgattatatgtttgaaattttgaagttgggaaaacggggtgttaca 17045686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 12773308 - 12773258
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||| |||| ||||||  |||| ||||||||||||||||    
T  12773308 tactctgattatatgtatgaaatttttaagttgggaaaacggggtgttaca 12773258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 18223227 - 18223257
Alignment:
Q  28 tttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||||||||||||    
T  18223227 tttttatattggaaaaacggggtgttacaat 18223257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 15006955 - 15006922
Alignment:
Q  23 tgaattttttatattggaaaaacggggtgttaca 56  Q
    |||| |||||||||||||||||||||||||||||    
T  15006955 tgaaatttttatattggaaaaacggggtgttaca 15006922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 15790856 - 15790799
Alignment:
Q  3 gattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaataa 60  Q
    ||||| ||||||||| | | |||| ||||||| |||| ||||||||||||||||||||    
T  15790856 gattaatctgattatttatgtgaaatttttatgttgggaaaacggggtgttacaataa 15790799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16349530 - 16349586
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||| ||||||| |||  ||||||||||| ||||| ||||||||||||    
T  16349530 atgattactctgataatatgtt-gaaaattttatattgggaaaacagggtgttacaat 16349586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16357818 - 16357870
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||||||| ||||||| |||  ||||||||||| ||||||||||||||    
T  16357818 atgattactctgataatatgtt-gaaaattttatattgggaaaacggggtgtta 16357870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17332466 - 17332409
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||| |   |||| ||||||| |||| ||||||||||||||||||    
T  17332466 atgattactctgattatttaaatgaaatttttatgttgggaaaacggggtgttacaat 17332409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 46641788 - 46641735
Alignment:
Q  2 tgattactctgattatatgtttgaattttttatattggaaaaacggggtgttac 55  Q
    ||||||||||||| ||||||||||| ||||||  |||| |||| ||||||||||    
T  46641788 tgattactctgataatatgtttgaaatttttaagttgggaaaatggggtgttac 46641735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 429 - 371
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatatt-ggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  429 atgattactctgattatatgtttgaaatttttatgttgggaaaaacggggtgttacaat 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45216 - 45158
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatatt-ggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  45216 atgattactctgattatatgtttgaaatttttatgttgggaaaaacggggtgttacaat 45158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 90 - 143
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  90 ttactctgattatatgtttgaaaattttatattgggaaaacggggtgttacaat 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 5999 - 6052
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  5999 ttactctgattatatgtttgaaatttttatgttgggaaaacggggtgttacaat 6052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 215 - 267
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  215 ttactctgattatatgtttgaaatttttatgttgggaaaacggggtgttacaa 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24784 - 24839
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||| || ||||||||||| |||||||||||| ||||||||||||||||    
T  24784 atgattactctaataatatgtttgaaatttttatattgggaaaacggggtgttaca 24839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 16892 - 16841
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||| |||||||| ||||||| | || |||||||||||||||||    
T  16892 ttactctgattat-tgtttgaaatttttatgtcgggaaaacggggtgttacaa 16841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 32420 - 32471
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  32420 ttactctgattttatgtttgaaatttttatattgggaaaacggggtgttaca 32471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16059 - 16116
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||| ||   |||||| |||||||||||||||||||||||||||||||    
T  16059 atgattactctgataattgttttgaaatttttatattggaaaaacggggtgttacaat 16116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20581 - 20638
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||| ||   |||||| |||||||||||||||||||||||||||||||    
T  20581 atgattactctgataattgttttgaaatttttatattggaaaaacggggtgttacaat 20638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21712 - 21767
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| ||   |||||| |||||||||||| ||||||||||||||||    
T  21712 atgattactctgataattgttttgaaatttttatattgggaaaacggggtgttaca 21767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 84793 - 84846
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  84793 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 84846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 70914 - 70862
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| | | |||| |||||||||||||||||||||||||||||||    
T  70914 tactctgattatttttatgaaatttttatattggaaaaacggggtgttacaat 70862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 78757 - 78705
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| | | |||| |||||||||||||||||||||||||||||||    
T  78757 tactctgattatttttatgaaatttttatattggaaaaacggggtgttacaat 78705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 79278 - 79334
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||| || ||| |||| |||||||||||| ||||||||||||||||||    
T  79278 atgattactctgataat-tgtatgaaatttttatattgggaaaacggggtgttacaat 79334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3989 - 4045
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||| ||||||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  3989 atgactactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaa 4045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8549 - 8605
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||| ||||||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  8549 atgactactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaa 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 3547 - 3599
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  3547 tactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaat 3599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9116 - 9171
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||| ||||||| ||| |||||||||||| |||||||||||||||||    
T  9116 atgattactctgataatatgtt-gaaatttttatattgggaaaacggggtgttacaa 9171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44785 - 44841
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||| |||||||  || |||||||||||| |||||||||||||||||    
T  44785 atgattactctgataatatgttgaaaatttttatattgggaaaacggggtgttacaa 44841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 100766 - 100710
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||| ||||||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  100766 atgaatactctgattatatgtttgaaatttttaagttgggaaaacggggtgttacaa 100710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 80392 - 80444
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| | | |||| ||||||| |||| ||||||||||||||||||    
T  80392 tactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaat 80444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 7716 - 7665
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||| ||||||||||| ||||||  |||||||||||||||||||||    
T  7716 ttactctgataatatgtttgaaatttttaagttggaaaaacggggtgttaca 7665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 4638 - 4587
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  4638 ttactctgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 4587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 1282 - 1333
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| |||||||||| ||||||| | ||||||||    
T  1282 ttactctgattatatgtttgaaatttttatattagaaaaacagagtgttaca 1333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 22522 - 22575
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||| ||||||||||| ||||||  |||| ||||||||||||||||||    
T  22522 ttactctgataatatgtttgaaatttttaagttgggaaaacggggtgttacaat 22575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 39595 - 39647
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||| |||||| | ||||||| |||| ||||||||||||||||||    
T  39595 ttactctgattat-tgtttggaatttttatgttgggaaaacggggtgttacaat 39647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 316 - 367
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||| |||||||||||  |||||| |||||||||    
T  316 ttactctgattatatgtttgaaatttttatattgagaaaacgaggtgttaca 367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 331514 - 331464
Alignment:
Q  7 actctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||| | | |||| |||||||||||| |||||||||||||||||    
T  331514 actctgattatttttatgaaatttttatattgggaaaacggggtgttacaa 331464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 36576 - 36523
Alignment:
Q  5 ttactctgattatatgtttgaattttttata--ttggaaaaacggggtgttaca 56  Q
    |||||||||| ||||||||||| ||||||||  |||||||||||||||||||||    
T  36576 ttactctgataatatgtttgaaatttttataagttggaaaaacggggtgttaca 36523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 18478 - 18428
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  18478 tactctgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 18428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 78236 - 78289
Alignment:
Q  5 ttactctgattatatgtttgaattttttata--ttggaaaaacggggtgttaca 56  Q
    |||||||||| ||||||||||| ||||||||  |||||||||||||||||||||    
T  78236 ttactctgataatatgtttgaaatttttataagttggaaaaacggggtgttaca 78289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 174014 - 173964
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  174014 tactctgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 173964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14582 - 14638
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||| ||||||| |||  ||||||||||| ||||||||||||||||||    
T  14582 atgattactctgataatatgtt-gaaaattttatattgggaaaacggggtgttacaat 14638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 37085 - 37032
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||| ||||||||||| ||||||  |||| ||||||||||||||||||    
T  37085 ttactctgataatatgtttgaaatttttacgttgggaaaacggggtgttacaat 37032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 534 - 481
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||||||||  ||||||  |||| ||||||||||||||||||    
T  534 ttactctgattatatgtttgacatttttaagttgggaaaacggggtgttacaat 481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 6039 - 5987
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| ||||||||||| ||||||  |||| ||||||||||||||||||    
T  6039 tactctgataatatgtttgaaatttttaagttgggaaaacggggtgttacaat 5987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 11296 - 11348
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||| |||||||||| ||||||  |||| |||||||||||||||||    
T  11296 ttactctgattttatgtttgaaatttttaagttgggaaaacggggtgttacaa 11348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 538 - 486
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| | | |||| ||||||| |||||||||||||||||||||||    
T  538 tactctgattatttatgtgaaatttttatgttggaaaaacggggtgttacaat 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 13133 - 13081
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||||||||||| |||| |  |||| |||||||||||||||||    
T  13133 ttactctgattatatgtttgaaattttgaagttgggaaaacggggtgttacaa 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1093 - 1035
Alignment:
Q  1 atgattactctgatt--atatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||||  ||||||| ||| |||||||||||| ||||||||||||||||||    
T  1093 atgattactctgatttaatatgtt-gaaatttttatattgggaaaacggggtgttacaat 1035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32807 - 32751
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatatt-ggaaaaacggggtgttaca 56  Q
    ||||||||||||||||||| |||||| ||||||| || ||||||||||||| |||||    
T  32807 atgattactctgattatatatttgaaatttttatgttgggaaaaacggggtattaca 32751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4082 - 4024
Alignment:
Q  1 atgattactctgattatatgttt-gaattttttatattggaaaaacggggtgttacaata 59  Q
    ||||||||||||||| ||||||  ||| |||||||||||||||||||| |||||||||||    
T  4082 atgattactctgatt-tatgttaagaaatttttatattggaaaaacggagtgttacaata 4024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10124 - 10069
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||| ||||||||||||||||||||| ||||||  |||| ||||| ||||||||||    
T  10124 atgaatactctgattatatgtttgaaatttttaagttgggaaaacagggtgttaca 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 329 - 357
Alignment:
Q  28 tttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||||||    
T  329 tttttatattggaaaaacggggtgttaca 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5814 - 5760
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||| ||||||||| ||||||||||| ||||||| |||| ||||||||||||||||    
T  5814 atgaatactctgat-atatgtttgaaatttttatgttgggaaaacggggtgttaca 5760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1064 - 1009
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||| |||| ||  |||| ||||||| |||||||||||||||||||||    
T  1064 atgattactctggttatttgaatgaaatttttatgttggaaaaacggggtgttaca 1009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6368 - 6313
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||| |||| ||  |||| ||||||| |||||||||||||||||||||    
T  6368 atgattactctggttatttgaatgaaatttttatgttggaaaaacggggtgttaca 6313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 39187 - 39136
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||| |||||||||||||| ||||||  |||| ||||||||||||||||    
T  39187 ttactctaattatatgtttgaaatttttaagttgggaaaacggggtgttaca 39136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 46245 - 46194
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    ||||| |||||||||||||||| ||||||  |||| ||||||||||||||||    
T  46245 ttactttgattatatgtttgaaatttttaagttgggaaaacggggtgttaca 46194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 42861 - 42912
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||| | | |||| ||||||| ||||||||||||||||||||||    
T  42861 tactctgattatttttatgaaatttttatgttggaaaaacggggtgttacaa 42912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 39392 - 39442
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||| | | |||| |||||||||||| ||||||||||||||||    
T  39392 tactctgattatttttatgaaatttttatattgggaaaacggggtgttaca 39442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 57920 - 57866
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| ||||||| ||| |||||||||||| |||||||||| |||||    
T  57920 atgattactctgataatatgtt-gaaatttttatattgggaaaacggggttttaca 57866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22405 - 22459
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| ||||||| ||| |||||||||||| |||||||| |||||||    
T  22405 atgattactctgataatatgtt-gaaatttttatattgggaaaacgggatgttaca 22459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000005; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 40436 - 40385
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||| ||||||||||| ||||||  |||| ||||||||||||||||    
T  40436 ttactctgataatatgtttgaaatttttaagttgggaaaacggggtgttaca 40385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 12756 - 12703
Alignment:
Q  6 tactctgattatatgttt-gaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| | |||||| ||| |||||||||||| ||||||||||||||||||    
T  12756 tactctgataaaatgtttagaaatttttatattgggaaaacggggtgttacaat 12703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 22284 - 22231
Alignment:
Q  6 tactctgattatatgttt-gaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| | |||||| ||| |||||||||||| ||||||||||||||||||    
T  22284 tactctgataaaatgtttagaaatttttatattgggaaaacggggtgttacaat 22231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 6231 - 6175
Alignment:
Q  6 tactctgattatatgttt-gaattttttatattggaaaaacggggtgttacaataac 61  Q
    ||||||||| | |||||| ||| |||||||||||| ||||| |||||||||||||||    
T  6231 tactctgataaaatgtttagaaatttttatattgggaaaacagggtgttacaataac 6175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 195784 - 195839
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| ||   |||||| |||||||||||| ||||||||||||||||    
T  195784 atgattactctgataattgttttgaaatttttatattgggaaaacggggtgttaca 195839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 22524 - 22579
Alignment:
Q  3 gattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||| | | |||| ||||||| |||| ||||||||||||||||||    
T  22524 gattactctgattatttatgtgaaatttttatgttgggaaaacggggtgttacaat 22579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 496696 - 496641
Alignment:
Q  3 gattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||| | | |||| ||||||| ||||||||| |||||||||||||    
T  496696 gattactctgattatttatatgaaatttttatgttggaaaaatggggtgttacaat 496641  T

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Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 423405 - 423438
Alignment:
Q  28 tttttatattggaaaaacggggtgttacaataac 61  Q
    |||||||||||| |||||||||||||||||||||    
T  423405 tttttatattgggaaaacggggtgttacaataac 423438  T

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Target: scaffold0354 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 7058 - 7108
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||| | |||||| ||||||| |||| ||||||||||||||||    
T  7058 tactctgattatttttttgaaatttttatgttgggaaaacggggtgttaca 7108  T

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Target: scaffold0848 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 4017 - 4070
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||| |||||||||| ||||||  |||| ||||| ||||||||||||    
T  4017 ttactctgattttatgtttgaaatttttaagttgggaaaacagggtgttacaat 4070  T

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Target: scaffold0598 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 1878 - 1927
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||||||||||||||| ||||||  |||| |||||| |||||||    
T  1878 ttactctgattatatgtttgaaatttttaagttgggaaaacgaggtgtta 1927  T

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Target: scaffold0577 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 5535 - 5588
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    |||||||||||||| | | |||| ||||||| |||| |||||||||||||||||    
T  5535 attactctgattatctttatgaaatttttatcttgggaaaacggggtgttacaa 5588  T

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Target: scaffold0490 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 1199 - 1146
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||||||||||||  |||||  |||| ||||||| ||||||||||    
T  1199 ttactctgattatatgtttgaaaattttaagttgggaaaacggagtgttacaat 1146  T

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Target: scaffold0450 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 2491 - 2544
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaata 59  Q
    |||||||||||| |   ||||||||||| ||||| |||||||||||||||||||    
T  2491 tactctgattatttaaatgaattttttacattgggaaaacggggtgttacaata 2544  T

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Target: scaffold0431 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 11671 - 11618
Alignment:
Q  6 tactctgattatatgttt-gaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| | |||||| ||| |||||||||||| ||||||||||||||||||    
T  11671 tactctgataaaatgtttagaaatttttatattgggaaaacggggtgttacaat 11618  T

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Target: scaffold0395 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 15544 - 15596
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||||||| |||||||||||||||  |||| |||||| |||||||||||    
T  15544 ttactctgattat-tgtttgaattttttaagttgggaaaacgaggtgttacaat 15596  T

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Target: scaffold0228 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 21257 - 21204
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||| |||| ||||||||||| ||||||  |||| ||||||||||||||||||    
T  21257 ttactttgataatatgtttgaaatttttaagttgggaaaacggggtgttacaat 21204  T

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Target: scaffold0228; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 19474 - 19502
Alignment:
Q  28 tttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||||||    
T  19474 tttttatattggaaaaacggggtgttaca 19502  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22920 - 22868
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||||||| ||||||| |||  ||||||||||| ||||||||||||||    
T  22920 atgattactctgataatatgtt-gaaaattttatattgggaaaacggggtgtta 22868  T

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Target: scaffold0079; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37751 - 37695
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||||| ||||||| |||  ||||||||||| ||||| ||||||||||||    
T  37751 atgattactctgataatatgtt-gaaaattttatattgggaaaacagggtgttacaat 37695  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 340841 - 340890
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgtta 54  Q
    |||||||||| ||||||||||| ||||||  |||| ||||||||||||||    
T  340841 ttactctgataatatgtttgaaatttttaagttgggaaaacggggtgtta 340890  T

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Target: scaffold2112 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2112
Description:

Target: scaffold2112; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 879 - 827
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||||||||| | | |||| ||||||| |||| ||||||||||||||||||    
T  879 tactctgattatttttatgaaatttttatgttgggaaaacggggtgttacaat 827  T

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Target: scaffold1351 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 903 - 851
Alignment:
Q  1 atgattactctgattatatgtttgaattttttatattggaaaaacggggtgtt 53  Q
    ||||||||||||||||| ||  |||| ||||||| |||| |||||||||||||    
T  903 atgattactctgattatttgaatgaaatttttatgttgggaaaacggggtgtt 851  T

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Target: scaffold0621 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 1321 - 1269
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| ||||||||||| || |||  |||| ||||||||||||||||||    
T  1321 tactctgataatatgtttgaaattattaagttgggaaaacggggtgttacaat 1269  T

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Target: scaffold0621; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 5738 - 5686
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    ||||||||| ||||||||||| || |||  |||| ||||||||||||||||||    
T  5738 tactctgataatatgtttgaaattattaagttgggaaaacggggtgttacaat 5686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 8101 - 8045
Alignment:
Q  7 actctgattatatgtttgaattttttatattggaaaaacggggtgttacaataacct 63  Q
    ||||||||||| | | |||| ||||||| |||| ||||||||||||||||| |||||    
T  8101 actctgattatttatgtgaaatttttatgttgggaaaacggggtgttacaaaaacct 8045  T

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Target: scaffold0293 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 10174 - 10146
Alignment:
Q  28 tttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||||||    
T  10174 tttttatattggaaaaacggggtgttaca 10146  T

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Target: scaffold0284 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 18042 - 18014
Alignment:
Q  28 tttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||||||||||||||||||    
T  18042 tttttatattggaaaaacggggtgttaca 18014  T

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Target: scaffold0278 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 4855 - 4803
Alignment:
Q  6 tactctgattatatgtttgaattttttatattggaaaaacggggtgttacaat 58  Q
    |||||| |||||||||||||| ||||||   ||| ||||||||||||||||||    
T  4855 tactctcattatatgtttgaaatttttaagctgggaaaacggggtgttacaat 4803  T

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Target: scaffold0158 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2130 - 2075
Alignment:
Q  1 atgattactctgattatatgttt-gaattttttatattggaaaaacggggtgttaca 56  Q
    ||||||||||||||| ||||||  ||| ||||||| |||||||||||||||||||||    
T  2130 atgattactctgatt-tatgttaagaaatttttatgttggaaaaacggggtgttaca 2075  T

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Target: scaffold0138 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 18999 - 18947
Alignment:
Q  4 attactctgattatatgtttgaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||||||| |   |||| |||||||||||| ||||||||||||||||    
T  18999 attactctgattatttaaatgaaatttttatattggcaaaacggggtgttaca 18947  T

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Target: scaffold0120 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 18211 - 18262
Alignment:
Q  5 ttactctgattatatgtttgaattttttatattggaaaaacggggtgttacaa 57  Q
    ||||||||||||| |||||||| ||||||  |||| |||||||||||||||||    
T  18211 ttactctgattat-tgtttgaaatttttaagttgggaaaacggggtgttacaa 18262  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 12165 - 12114
Alignment:
Q  5 ttactctgattatatgttt-gaattttttatattggaaaaacggggtgttaca 56  Q
    |||||||||| |||||||| ||| |||||||||||| ||||||||||||||||    
T  12165 ttactctgat-atatgtttagaaatttttatattgggaaaacggggtgttaca 12114  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 169255 - 169223
Alignment:
Q  28 tttttatattggaaaaacggggtgttacaataa 60  Q
    |||||||||||| ||||||||||||||||||||    
T  169255 tttttatattgggaaaacggggtgttacaataa 169223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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