View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10327_low_4 (Length: 486)
Name: NF10327_low_4
Description: NF10327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10327_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 456; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 2 - 469
Target Start/End: Original strand, 45459522 - 45459989
Alignment:
| Q |
2 |
ggtttcatgaaagtcacagatcttagcacaggtgctgtcacttttacctctccttctgatcctaatggaacaggtgccaatttggttaaagctgttgtgg |
101 |
Q |
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| T |
45459522 |
ggtttcatgaaagtcacagatcttagcacaggtgctgtcacttttacctctccttctgatcctaatggaacaggtgccaatttggttaaagctgttgtgg |
45459621 |
T |
|
| Q |
102 |
cacaaccatacaatatttcagtggtgcagatcagcactgtcattttgccaccatctttgcttgcttcctccaatgccacatcacatgctccttctccggc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459622 |
cacaaccatacaatatttcagtggtgcagatcagcactgtcattttgccaccatctttgcttgcttcctccaatgccacatcacatgctccttctccggc |
45459721 |
T |
|
| Q |
202 |
tcctgttgtttcacctattccagctcctgtgccagtggtatcaccagtgccagttgcagcaccagttatagttccagtgcctatgcctgtggtatcgcca |
301 |
Q |
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| T |
45459722 |
tcctgttgtttcacctattccagctcctgtgccagtggtatcaccagtgccagttgcagcaccagttatagttccagtgcctatgcctgtggtatcgcca |
45459821 |
T |
|
| Q |
302 |
gttccagtagtttcaccggtgccaatagctactccagtttcggtaccagtaaagtccccagtgccggtagcagctccagctccagtagccgtaccagctg |
401 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459822 |
gttccagtagtttcaccggtgccaatagctactccagttccggtaccagtaaagtccccagtgccggtagcagctccagctccagtagccgtaccagctg |
45459921 |
T |
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| Q |
402 |
cagctccagctccagtagacgtaccagatgaagctccagctccagggccggcaatatcacctgtggaa |
469 |
Q |
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|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
45459922 |
cagctccagctccagtagccgtaccagttgaagctccagctccagggccggcaatatcacctgtggaa |
45459989 |
T |
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