View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10329_low_4 (Length: 345)

Name: NF10329_low_4
Description: NF10329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10329_low_4
NF10329_low_4
[»] chr6 (74 HSPs)
chr6 (53-344)||(26655750-26656041)
chr6 (53-344)||(26761721-26762012)
chr6 (1-344)||(27604840-27605189)
chr6 (42-345)||(27718513-27718816)
chr6 (42-345)||(27724979-27725281)
chr6 (53-345)||(28786039-28786331)
chr6 (53-345)||(26802199-26802495)
chr6 (42-345)||(27698628-27698929)
chr6 (53-345)||(27228995-27229285)
chr6 (42-345)||(28780889-28781192)
chr6 (77-345)||(28792184-28792452)
chr6 (75-345)||(27611136-27611406)
chr6 (37-341)||(27338203-27338500)
chr6 (37-341)||(27398943-27399240)
chr6 (54-341)||(27678716-27678995)
chr6 (82-341)||(31284078-31284337)
chr6 (124-341)||(27593158-27593375)
chr6 (54-341)||(27706540-27706819)
chr6 (181-345)||(27531331-27531495)
chr6 (154-345)||(26884025-26884216)
chr6 (124-341)||(27677752-27677969)
chr6 (121-323)||(26622805-26623007)
chr6 (121-323)||(26728783-26728985)
chr6 (121-345)||(26646302-26646532)
chr6 (121-345)||(26752270-26752500)
chr6 (55-341)||(26823609-26823889)
chr6 (122-341)||(26861446-26861665)
chr6 (186-345)||(25481636-25481795)
chr6 (186-345)||(25579613-25579772)
chr6 (186-345)||(26142759-26142918)
chr6 (186-345)||(26055820-26055979)
chr6 (186-345)||(26075790-26075949)
chr6 (60-290)||(27427792-27428020)
chr6 (186-345)||(25538434-25538593)
chr6 (186-345)||(26048739-26048898)
chr6 (186-345)||(26069908-26070067)
chr6 (187-341)||(28234459-28234613)
chr6 (56-151)||(26055724-26055818)
chr6 (56-150)||(26048643-26048736)
chr6 (56-150)||(26069812-26069905)
chr6 (56-150)||(26075694-26075787)
chr6 (56-150)||(26142663-26142756)
chr6 (223-345)||(29825958-29826080)
chr6 (154-341)||(28325343-28325530)
chr6 (56-150)||(25481540-25481633)
chr6 (56-150)||(25538338-25538431)
chr6 (224-341)||(26848592-26848709)
chr6 (187-345)||(28226845-28227003)
chr6 (148-341)||(28185222-28185415)
chr6 (211-315)||(27214336-27214440)
chr6 (211-315)||(27234788-27234892)
chr6 (238-341)||(26635636-26635739)
chr6 (238-341)||(26741602-26741705)
chr6 (210-341)||(28181032-28181163)
chr6 (190-341)||(28242702-28242853)
chr6 (222-344)||(26949591-26949713)
chr6 (238-324)||(27665272-27665358)
chr6 (40-150)||(25579499-25579610)
chr6 (232-317)||(26617266-26617351)
chr6 (232-317)||(26723194-26723279)
chr6 (222-317)||(25071589-25071684)
chr6 (236-339)||(26811453-26811556)
chr6 (238-317)||(26959111-26959190)
chr6 (224-345)||(25507043-25507158)
chr6 (271-341)||(26937073-26937143)
chr6 (255-339)||(28491660-28491744)
chr6 (255-339)||(29804070-29804154)
chr6 (187-242)||(26342171-26342226)
chr6 (262-341)||(26893609-26893688)
chr6 (238-341)||(26974998-26975101)
chr6 (266-341)||(28149912-28149986)
chr6 (262-341)||(29467797-29467876)
chr6 (198-252)||(28098596-28098650)
chr6 (119-345)||(28139368-28139594)
[»] scaffold0349 (3 HSPs)
scaffold0349 (42-345)||(3556-3858)
scaffold0349 (42-345)||(14489-14790)
scaffold0349 (42-219)||(8061-8238)
[»] scaffold0277 (2 HSPs)
scaffold0277 (42-345)||(13766-14069)
scaffold0277 (53-345)||(4805-5102)
[»] scaffold1254 (1 HSPs)
scaffold1254 (37-345)||(51-352)
[»] scaffold0419 (1 HSPs)
scaffold0419 (37-345)||(7277-7578)
[»] chr4 (8 HSPs)
chr4 (43-341)||(18699525-18699821)
chr4 (53-341)||(18731629-18731915)
chr4 (43-341)||(18655602-18655898)
chr4 (53-341)||(18679692-18679978)
chr4 (119-341)||(18724210-18724432)
chr4 (60-290)||(17989226-17989454)
chr4 (60-290)||(18073535-18073763)
chr4 (196-345)||(5091088-5091237)
[»] chr1 (3 HSPs)
chr1 (93-345)||(28164483-28164735)
chr1 (119-341)||(268482-268704)
chr1 (98-345)||(28127800-28128042)
[»] chr8 (2 HSPs)
chr8 (126-341)||(29273908-29274123)
chr8 (187-323)||(31903746-31903882)
[»] scaffold0003 (1 HSPs)
scaffold0003 (60-290)||(59343-59571)
[»] scaffold0038 (4 HSPs)
scaffold0038 (187-341)||(34620-34774)
scaffold0038 (154-341)||(116658-116845)
scaffold0038 (187-345)||(27343-27501)
scaffold0038 (190-341)||(42864-43015)
[»] chr5 (1 HSPs)
chr5 (225-341)||(16688944-16689060)
[»] scaffold0019 (1 HSPs)
scaffold0019 (210-341)||(58420-58551)
[»] chr2 (1 HSPs)
chr2 (235-341)||(17993822-17993928)


Alignment Details
Target: chr6 (Bit Score: 256; Significance: 1e-142; HSPs: 74)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 53 - 344
Target Start/End: Original strand, 26655750 - 26656041
Alignment:
Q  53 atcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctc 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26655750 atcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctc 26655849  T
Q  153 atcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  26655850 atcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctt 26655949  T
Q  253 actgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatc 344  Q
    | ||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||    
T  26655950 attgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatc 26656041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 53 - 344
Target Start/End: Original strand, 26761721 - 26762012
Alignment:
Q  53 atcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctc 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26761721 atcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctc 26761820  T
Q  153 atcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  26761821 atcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctt 26761920  T
Q  253 actgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatc 344  Q
    | ||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||    
T  26761921 attgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatc 26762012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 27605189 - 27604840
Alignment:
Q  1 aaaataaccatttcttaagaacaatttctccatgttatattaaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaact 100  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27605189 aaaataactatttattaagaacaatttctccttgttatattaaagactccaaatcacagaccacaaaaacttactcattcatattctgcattctcaaact 27605090  T
Q  101 cttttttcatccattttctctcaattctcatggctatacaatcaccttcctcat------cctcttcattttcctatgggtttaaataccaagtgttcct 194  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||      ||||||||||||||||||  || |  ||||||||||||||    
T  27605089 cttttttcatccaatttctctcaattctcatggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttcct 27604990  T
Q  195 cagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatctt 294  Q
     ||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  27604989 tagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatgaaaatgatctt 27604890  T
Q  295 caaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatc 344  Q
    | |||||||||||||||||||||| ||||  ||||||||||||| |||||    
T  27604889 cgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatc 27604840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 42 - 345
Target Start/End: Complemental strand, 27718816 - 27718513
Alignment:
Q  42 aaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaa 141  Q
    ||||||| || |||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  27718816 aaagacttcacatcacagaacacaaaaattcactcattcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaa 27718717  T
Q  142 tcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctct 241  Q
    ||||||||||||||||||||||| ||| |||| || |  |||||||||||||||||||||||||||| ||||||||||||| ||||||| || |||||||    
T  27718716 tcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctct 27718617  T
Q  242 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  27718616 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatga 27718517  T
Q  342 atct 345  Q
    ||||    
T  27718516 atct 27718513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 42 - 345
Target Start/End: Complemental strand, 27725281 - 27724979
Alignment:
Q  42 aaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaa 141  Q
    ||||||| || || |||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||||    
T  27725281 aaagacttcacataacagaccacaaaaatttac-cattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaa 27725183  T
Q  142 tcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctct 241  Q
    |||||||||||||||||||||||||||||||| || |  |||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||    
T  27725182 tcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctct 27725083  T
Q  242 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  27725082 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatga 27724983  T
Q  342 atct 345  Q
    ||||    
T  27724982 atct 27724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 53 - 345
Target Start/End: Original strand, 28786039 - 28786331
Alignment:
Q  53 atcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctc 152  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  28786039 atcacagaccacaaaaacaaactcattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctc 28786138  T
Q  153 atcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctt 252  Q
    ||||||||||||||||||||| || |  |||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||    
T  28786139 atcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctctt 28786238  T
Q  253 actgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  28786239 actgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatct 28786331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 53 - 345
Target Start/End: Original strand, 26802199 - 26802495
Alignment:
Q  53 atcacagaccacaaaaacttactcattcatattctgcattcccaaactctttt----ttcatccattttctctcaattctcatggctatacaatcacctt 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||||| |||||| ||||| |||||||||| || || ||||    
T  26802199 atcacagaccacaaaaacttactcattcatattctgcattctcaaactcttttttttttcatccaatttctcacaattttcatggctatgcagtctcctt 26802298  T
Q  149 cctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggc 248  Q
    ||||||||||||||||||| ||||| || |  |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||    
T  26802299 cctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggc 26802398  T
Q  249 tcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802399 tcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 26802495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 42 - 345
Target Start/End: Complemental strand, 27698929 - 27698628
Alignment:
Q  42 aaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaa 141  Q
    ||||||| || |||||||| |||||||  ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||    
T  27698929 aaagacttcacatcacagaacacaaaat-ttactcattcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaa 27698832  T
Q  142 tcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctct 241  Q
    ||||||||||||||| |||||||||||||||| || |  |||||||||||| ||||||||||||||| ||||||||||||||||||||| || |||||||    
T  27698831 tcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctct 27698732  T
Q  242 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  27698731 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatga 27698632  T
Q  342 atct 345  Q
    ||||    
T  27698631 atct 27698628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 53 - 345
Target Start/End: Original strand, 27228995 - 27229285
Alignment:
Q  53 atcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctc 152  Q
    |||||| ||||||||||| ||||||||||||||||||||||  ||||||||||  |||||| |||||||||| |||||||||||||||||||||||||||    
T  27228995 atcacataccacaaaaacatactcattcatattctgcattctaaaactctttt--catccaatttctctcaagtctcatggctatacaatcaccttcctc 27229092  T
Q  153 atcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctt 252  Q
     |||||||||||||||| ||| || |  |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  27229093 ttcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctctt 27229192  T
Q  253 actgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  27229193 actgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatct 27229285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 42 - 345
Target Start/End: Original strand, 28780889 - 28781192
Alignment:
Q  42 aaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaa 141  Q
    |||||||  ||||||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||||||||| |||    
T  28780889 aaagactttaaatcacagaccacaaaaacaaactcattcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaa 28780988  T
Q  142 tcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctct 241  Q
    | ||||||||| |||||||||||||||| ||  || |  |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  28780989 ttaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctct 28781088  T
Q  242 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  28781089 acaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaaga 28781188  T
Q  342 atct 345  Q
    ||||    
T  28781189 atct 28781192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 77 - 345
Target Start/End: Original strand, 28792184 - 28792452
Alignment:
Q  77 attcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtt 176  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  28792184 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggatt 28792283  T
Q  177 taaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttc 276  Q
     |  |||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||    
T  28792284 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 28792383  T
Q  277 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  28792384 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatct 28792452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 75 - 345
Target Start/End: Complemental strand, 27611406 - 27611136
Alignment:
Q  75 tcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatggg 174  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| |||| | ||||||| || |||||||||||||||||     
T  27611406 tcattcatattctgcattctcaaactcttttttcatccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatgga 27611307  T
Q  175 tttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 274  Q
    || |  |||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27611306 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 27611207  T
Q  275 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27611206 tcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatct 27611136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 37 - 341
Target Start/End: Complemental strand, 27338500 - 27338203
Alignment:
Q  37 atattaaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggcta 136  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||       |||||| ||||||||||   ||||||||||||||||||||||    
T  27338500 atattaaagactccacatcacagaccacaaaaacttactcattcatattct-------caaacttttttttcatcttatttctctcaattctcatggcta 27338408  T
Q  137 tacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaa 236  Q
    | ||||||| |||||| ||||||||| |||||| |||||| |||||||| ||||||||||||||||||| |||||||||||   |||||||||| |||||    
T  27338407 tgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaa 27338308  T
Q  237 tctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccatt 336  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||  |||||||||||    
T  27338307 tctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccatt 27338208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 37 - 341
Target Start/End: Complemental strand, 27399240 - 27398943
Alignment:
Q  37 atattaaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggcta 136  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||       |||||| ||||||||||   ||||||||||||||||||||||    
T  27399240 atattaaagactccacatcacagaccacaaaaacttactcattcatattct-------caaacttttttttcatcttatttctctcaattctcatggcta 27399148  T
Q  137 tacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaa 236  Q
    | ||||||| |||||| ||||||||| |||||| |||||| |||||||| ||||||||||||||||||| |||||||||||   |||||||||| |||||    
T  27399147 tgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaa 27399048  T
Q  237 tctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccatt 336  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||  |||||||||||    
T  27399047 tctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccatt 27398948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 54 - 341
Target Start/End: Original strand, 27678716 - 27678995
Alignment:
Q  54 tcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctca 153  Q
    ||||||||||||||||||| ||||||||||||||       ||||||||||||||||| | ||||||| || |||||||||||| ||||||||||||||     
T  27678716 tcacagaccacaaaaactt-ctcattcatattct-------caaactcttttttcatctaatttctctaaaatctcatggctatgcaatcaccttcctct 27678807  T
Q  154 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 253  Q
    ||| ||||| ||||||||| ||  ||||||||||| ||||||||||| || || | |||||||||| ||||||| || || |||||||||||||||||||    
T  27678808 tccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctctta 27678907  T
Q  254 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    |||||||||||||| | |||||||||||| | |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  27678908 ctgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaaga 27678995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 82 - 341
Target Start/End: Original strand, 31284078 - 31284337
Alignment:
Q  82 tattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaat 181  Q
    |||||||||||| |||| ||||| ||||||||| ||||||||| |||||||||||| |||||| ||||||| ||||||||| |||||||||  || ||||    
T  31284078 tattctgcattctcaaattctttcttcatccatattctctcaaatctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaat 31284177  T
Q  182 accaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattga 281  Q
    ||||||| ||||| ||||| ||||| | |||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31284178 accaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattga 31284277  T
Q  282 tgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||| | ||| ||||||||||| |||||||||||||||||||||  ||| |||||||||||    
T  31284278 tgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaaga 31284337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 124 - 341
Target Start/End: Complemental strand, 27593375 - 27593158
Alignment:
Q  124 attctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacg 223  Q
    |||||||||||||| |||||||||||||| ||| ||||| |||||||||  |  ||||||||||| ||||||||||| || || | |||||||||| |||    
T  27593375 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 27593276  T
Q  224 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 323  Q
    |||| || |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27593275 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 27593176  T
Q  324 catcaaggccattgaaga 341  Q
      ||||||||||||||||    
T  27593175 tctcaaggccattgaaga 27593158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 54 - 341
Target Start/End: Complemental strand, 27706819 - 27706540
Alignment:
Q  54 tcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctca 153  Q
    ||||||||||||||||||| ||||||||||||||       ||||||||||||||||| | ||||||| || |||||||||||| |||||||||| |||     
T  27706819 tcacagaccacaaaaactt-ctcattcatattct-------caaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctct 27706728  T
Q  154 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 253  Q
    ||| ||||| ||||||||| ||  ||||||||||| ||||||||||| || ||   |||||||||| ||||||| || |||||||||||||||||| ||     
T  27706727 tccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttg 27706628  T
Q  254 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
     ||||||||||||||| |||||||||||  |  |||| ||||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  27706627 atgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaaga 27706540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 181 - 345
Target Start/End: Complemental strand, 27531495 - 27531331
Alignment:
Q  181 taccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattg 280  Q
    |||||||||||||||||||||||||||   |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  27531495 taccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctataccttcattg 27531396  T
Q  281 atgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||| |||||    
T  27531395 atgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatct 27531331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 154 - 345
Target Start/End: Original strand, 26884025 - 26884216
Alignment:
Q  154 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 253  Q
    |||||||||||||||||||| || |  |||||||||||||||||||| || || | |||||||||| | ||||| ||||| |||||||||||||||||||    
T  26884025 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 26884124  T
Q  254 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    || ||||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||||||||||||||||||||    
T  26884125 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatct 26884216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 124 - 341
Target Start/End: Complemental strand, 27677969 - 27677752
Alignment:
Q  124 attctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacg 223  Q
    |||||||||||||| |||||||||||||| ||| ||||| ||||||||| ||  ||||||||||| ||||||| ||| || || | |||||||||| |||    
T  27677969 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacg 27677870  T
Q  224 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 323  Q
    |||| || |||||||||||||||||||||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  27677869 gtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 27677770  T
Q  324 catcaaggccattgaaga 341  Q
      ||||||||||||||||    
T  27677769 tctcaaggccattgaaga 27677752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 121 - 323
Target Start/End: Original strand, 26622805 - 26623007
Alignment:
Q  121 tcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggc 220  Q
    |||||| |||||||||| |||||||| ||||| ||||||||| ||||||||   || ||||||||||||||||| ||||| || |||| ||||||||||     
T  26622805 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26622904  T
Q  221 acggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 320  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| ||||||    
T  26622905 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26623004  T
Q  321 act 323  Q
    |||    
T  26623005 act 26623007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 121 - 323
Target Start/End: Original strand, 26728783 - 26728985
Alignment:
Q  121 tcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggc 220  Q
    |||||| |||||||||| |||||||| ||||| ||||||||| ||||||||   || ||||||||||||||||| ||||| || |||| ||||||||||     
T  26728783 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26728882  T
Q  221 acggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 320  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| ||||||    
T  26728883 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26728982  T
Q  321 act 323  Q
    |||    
T  26728983 act 26728985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 121 - 345
Target Start/End: Original strand, 26646302 - 26646532
Alignment:
Q  121 tcaattctcatggctatacaatcaccttcctcatcctcttcat------tttcctatgggtttaaataccaagtgttcctcagttttaggggcattgaca 214  Q
    ||||||||||||||||| ||||| |||||||  |||||||| |      ||||||| || || |  ||||| || |||||||  || ||||||| |||||    
T  26646302 tcaattctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgaca 26646401  T
Q  215 ctcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcac 314  Q
    ||||  |||||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||   ||||||| | |||||||||||||||||    
T  26646402 ctcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcac 26646501  T
Q  315 accatcactcatcaaggccattgaagaatct 345  Q
    |||||||||||||||||||||||||||||||    
T  26646502 accatcactcatcaaggccattgaagaatct 26646532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 121 - 345
Target Start/End: Original strand, 26752270 - 26752500
Alignment:
Q  121 tcaattctcatggctatacaatcaccttcctcatcctcttcat------tttcctatgggtttaaataccaagtgttcctcagttttaggggcattgaca 214  Q
    ||||||||||||||||| ||||| |||||||  |||||||| |      ||||||| || || |  ||||| || |||||||  || ||||||| |||||    
T  26752270 tcaattctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgaca 26752369  T
Q  215 ctcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcac 314  Q
    ||||  |||||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||   ||||||| | |||||||||||||||||    
T  26752370 ctcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcac 26752469  T
Q  315 accatcactcatcaaggccattgaagaatct 345  Q
    |||||||||||||||||||||||||||||||    
T  26752470 accatcactcatcaaggccattgaagaatct 26752500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 55 - 341
Target Start/End: Original strand, 26823609 - 26823889
Alignment:
Q  55 cacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcat 154  Q
    |||| ||||||  ||| |||||||||||||||||||||| |||||||||| ||| |||| ||||||||||||||||||||||| || ||| |||||||      
T  26823609 cacacaccacagtaacatactcattcatattctgcattctcaaactctttcttcgtccaatttctctcaattctcatggctatgcagtcaacttcctc-- 26823706  T
Q  155 cctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttac 254  Q
        |||| |||| ||||  || |||||||||||||| ||||||||||| |||  |||||||||| | |  ||||| |||||||||||||||||||||||    
T  26823707 ----ttcagtttcatatgatttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttac 26823802  T
Q  255 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
     |||||||||||||| |||||  |||||||   ||| ||||||||||| ||| |||||  || ||||||||  || |||||||||||    
T  26823803 agacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaaga 26823889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 341
Target Start/End: Original strand, 26861446 - 26861665
Alignment:
Q  122 caattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggca 221  Q
    ||||||| |||||||| |||||||||| ||| ||||||||  |||||||||| || |||||||| || ||||||||||| || || | |||||||||| |    
T  26861446 caattctgatggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggta 26861545  T
Q  222 cggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 321  Q
     |||||||| || |||||||||||||||||||||||||||||||| || |||||||| |||||   ||| ||||||||||| |||||||||| |  ||||    
T  26861546 tggttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatca 26861645  T
Q  322 ctcatcaaggccattgaaga 341  Q
    |||  ||| |||||||||||    
T  26861646 ctcgacaatgccattgaaga 26861665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 186 - 345
Target Start/End: Original strand, 25481636 - 25481795
Alignment:
Q  186 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 285  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  286 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatct 25481795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 186 - 345
Target Start/End: Original strand, 25579613 - 25579772
Alignment:
Q  186 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 285  Q
    ||||||||||||||| || |||| |||||||||  ||  |||||| || |||||||| |||||||||  |||||||||||| | ||||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  286 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatct 25579772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 186 - 345
Target Start/End: Original strand, 26142759 - 26142918
Alignment:
Q  186 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 285  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  286 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatct 26142918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 345
Target Start/End: Original strand, 26055820 - 26055979
Alignment:
Q  186 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 285  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  286 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatct 26055979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 345
Target Start/End: Original strand, 26075790 - 26075949
Alignment:
Q  186 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 285  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  286 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatct 26075949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 290
Target Start/End: Complemental strand, 27428020 - 27427792
Alignment:
Q  60 accacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctct 159  Q
    ||||||||||| | |||||||||||||||||||| ||||||||| |  ||||   |||||||||||||||||||| || |||| ||||| ||  ||||||    
T  27428020 accacaaaaacatcctcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctct 27427923  T
Q  160 tcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgaca 259  Q
    |||||||||||||  || |  ||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||    
T  27427922 tcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgaca 27427823  T
Q  260 agggaatccataccttcattgatgacaatga 290  Q
    ||||||| | |||||||  ||||||| ||||    
T  27427822 agggaattcgtaccttccatgatgacgatga 27427792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 345
Target Start/End: Original strand, 25538434 - 25538593
Alignment:
Q  186 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 285  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| |||||||||  ||||||||||||   ||| ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  286 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatct 25538593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 345
Target Start/End: Original strand, 26048739 - 26048898
Alignment:
Q  186 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 285  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  286 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| |||||||||    
T  26048839 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatct 26048898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 345
Target Start/End: Original strand, 26069908 - 26070067
Alignment:
Q  186 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 285  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  286 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| |||||||||    
T  26070008 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatct 26070067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 187 - 341
Target Start/End: Original strand, 28234459 - 28234613
Alignment:
Q  187 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 286  Q
    |||||||| |||||||| || | |||||||||  | |||||||| |  |||||||| |  ||||||  | ||||||||||||| ||||||||||||||||    
T  28234459 gtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgaca 28234558  T
Q  287 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
      || |||||| ||||||||||||| |||||||||||  ||||||||||||||||    
T  28234559 gggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaaga 28234613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 26055724 - 26055818
Alignment:
Q  56 acagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcct 151  Q
    |||||||||| ||| ||||||||||||||||| ||||  |||| ||||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  26055724 acagaccacacaaa-ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcct 26055818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 26048643 - 26048736
Alignment:
Q  56 acagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcc 150  Q
    |||||||||| ||| ||||||||||||||||| ||||  |||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  26048643 acagaccacacaaa-ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26048736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 26069812 - 26069905
Alignment:
Q  56 acagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcc 150  Q
    |||||||||| ||| ||||||||||||||||| ||||  |||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  26069812 acagaccacacaaa-ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26069905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 26075694 - 26075787
Alignment:
Q  56 acagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcc 150  Q
    |||||||||| ||| ||||||||||||||||| ||||  |||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  26075694 acagaccacacaaa-ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 26142663 - 26142756
Alignment:
Q  56 acagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcc 150  Q
    |||||||||| ||| ||||||||||||||||| ||||  |||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  26142663 acagaccacacaaa-ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 223 - 345
Target Start/End: Original strand, 29825958 - 29826080
Alignment:
Q  223 ggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 322  Q
    |||||||| |||||||||||||| ||||| |||||||||  ||| |  ||||||||||||||||| || ||||||||||| || ||||||||||| ||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  323 tcatcaaggccattgaagaatct 345  Q
    |  | ||||| ||| ||||||||    
T  29826058 ttgtgaaggcaattcaagaatct 29826080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 341
Target Start/End: Original strand, 28325343 - 28325530
Alignment:
Q  154 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 253  Q
    |||||||| ||||||||||| || |  ||  | |||||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  254 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  ||||||||||||||||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaaga 28325530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 25481540 - 25481633
Alignment:
Q  56 acagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcc 150  Q
    |||||||||| ||| ||||||||||||||||| ||||  |||| | ||||||||||||  |||| ||||||||||||||||| ||||||||||||    
T  25481540 acagaccacacaaa-ttactcattcatattctccattttcaaagttttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 25538338 - 25538431
Alignment:
Q  56 acagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcc 150  Q
    |||||||||| ||| ||| ||||||||||||| ||||  |||| ||||||||||||||  |||| ||||||||||||||||| ||||||||||||    
T  25538338 acagaccacacaaa-ttaatcattcatattctccattttcaaagtcttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25538431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 341
Target Start/End: Original strand, 26848592 - 26848709
Alignment:
Q  224 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 323  Q
    |||| ||||| |||||||| || |||||| ||||||| |||||||  ||||||||||||||||| |||||||| || || ||||| |||||||| || ||    
T  26848592 gtttcactggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacaccttcgct 26848691  T
Q  324 catcaaggccattgaaga 341  Q
    | |||||  |||||||||    
T  26848692 cctcaagaacattgaaga 26848709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 345
Target Start/End: Original strand, 28226845 - 28227003
Alignment:
Q  187 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 286  Q
    |||||||| |||||||| || |||||||||||  | ||||||||||| ||||||||||  | ||||  | | |||||||| || || ||| ||||||| |    
T  28226845 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 28226944  T
Q  287 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
      || |||||| |||| |||||||| ||| |||||||  |||||| |||||||||||||    
T  28226945 gagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatct 28227003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 148 - 341
Target Start/End: Original strand, 28185222 - 28185415
Alignment:
Q  148 tcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaagg 247  Q
    |||||||||||||| || |||||||| || |  ||  | |||||||| || ||||| || | |||||||||  |  |||||||||| |||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  248 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    |||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| ||| |||||||  ||||||||||||||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaaga 28185415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 315
Target Start/End: Original strand, 27214336 - 27214440
Alignment:
Q  211 gacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 310  Q
    |||||||| |||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||    
T  27214336 gacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaa 27214435  T
Q  311 tcaca 315  Q
    |||||    
T  27214436 tcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 315
Target Start/End: Complemental strand, 27234892 - 27234788
Alignment:
Q  211 gacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 310  Q
    |||||||| |||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||    
T  27234892 gacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaa 27234793  T
Q  311 tcaca 315  Q
    |||||    
T  27234792 tcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 26635636 - 26635739
Alignment:
Q  238 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 337  Q
    ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| |||||||||||||| || ||| |||||  |||||    
T  26635636 ctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattg 26635735  T
Q  338 aaga 341  Q
    ||||    
T  26635736 aaga 26635739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 26741602 - 26741705
Alignment:
Q  238 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 337  Q
    ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| |||||||||||||| || ||| |||||  |||||    
T  26741602 ctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattg 26741701  T
Q  338 aaga 341  Q
    ||||    
T  26741702 aaga 26741705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 341
Target Start/End: Original strand, 28181032 - 28181163
Alignment:
Q  210 tgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaa 309  Q
    |||||||||  | ||||||||||| |||||| | |  ||||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || |||    
T  28181032 tgacactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaa 28181131  T
Q  310 atcacaccatcactcatcaaggccattgaaga 341  Q
    || ||| |||||||  ||||||||||||||||    
T  28181132 ataacatcatcacttttcaaggccattgaaga 28181163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 341
Target Start/End: Original strand, 28242702 - 28242853
Alignment:
Q  190 ttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 289  Q
    ||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  290 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    | |||| | |||| ||  |||| |||||||||||  ||||||||||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaaga 28242853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 26949591 - 26949713
Alignment:
Q  222 cggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 321  Q
    |||||| || || |||||||| || |||||  |||||||||||||||  |||||||||||||| || || ||||| | ||| || ||||||||||| |||    
T  26949591 cggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaatcacaccttca 26949690  T
Q  322 ctcatcaaggccattgaagaatc 344  Q
    ||| |||||   |||||||||||    
T  26949691 ctcctcaagagaattgaagaatc 26949713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 27665358 - 27665272
Alignment:
Q  238 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 324  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||||||||| || |||| ||  || || ||||||||||| ||||||    
T  27665358 ctctataaggctctttctgacaaaggaatccacaccttcattgatgacaaggagcttccaactggtgacgaaatcacaccttcactc 27665272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 25579499 - 25579610
Alignment:
Q  40 ttaaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttt--tcatccattttctctcaattctcatggctat 137  Q
    ||||||| ||||  |||||||||||| | | ||||||||||||||||| ||||  |||| | |||||  |||||||  |||| |||||||||||||||||    
T  25579499 ttaaagaatccacctcacagaccacacaca-ttactcattcatattctccattttcaaagtttttttattcatccaaattctttcaattctcatggctat 25579597  T
Q  138 acaatcaccttcc 150  Q
     ||||||||||||    
T  25579598 gcaatcaccttcc 25579610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 26617266 - 26617351
Alignment:
Q  232 ggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 317  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26617266 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 26723194 - 26723279
Alignment:
Q  232 ggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 317  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26723194 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 317
Target Start/End: Original strand, 25071589 - 25071684
Alignment:
Q  222 cggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 317  Q
    ||||||||| || ||||| || || |||||| ||||||| |||||||| ||||| ||||||||||| || ||| | ||||| || |||||||||||    
T  25071589 cggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgacaaagagcttaagagaggtgacgaaatcacacc 25071684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 339
Target Start/End: Original strand, 26811453 - 26811556
Alignment:
Q  236 atctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccat 335  Q
    ||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||||||||| || ||| |||||  |||    
T  26811453 atctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcacaccttcgctcctcaagagcat 26811552  T
Q  336 tgaa 339  Q
    ||||    
T  26811553 tgaa 26811556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 317
Target Start/End: Original strand, 26959111 - 26959190
Alignment:
Q  238 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 317  Q
    ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| ||||||||||||||    
T  26959111 ctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagcttaaaaaaggggatgaaatcacacc 26959190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 345
Target Start/End: Complemental strand, 25507158 - 25507043
Alignment:
Q  224 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 323  Q
    |||||||| || ||||||||| ||||||   |||||||||||| ||      |||||||||   ||||||  |||||||||||||||||||||||||| |    
T  25507158 gttttactagccatctctacacggctctatatgacaagggaattca------cattgatgattgtgatctgaaaagaggagatgaaatcacaccatcagt 25507065  T
Q  324 catcaaggccattgaagaatct 345  Q
    | |||  |||||||||||||||    
T  25507064 cgtcatcgccattgaagaatct 25507043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 26937073 - 26937143
Alignment:
Q  271 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||||||||||||||||| || || ||  ||||||| |||||||||||||||||  ||||||| ||||||||    
T  26937073 accttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaaga 26937143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 28491744 - 28491660
Alignment:
Q  255 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 339  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  28491744 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 28491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 29804154 - 29804070
Alignment:
Q  255 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 339  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  29804154 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 29804070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 26342226 - 26342171
Alignment:
Q  187 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctcta 242  Q
    |||||||||| |||||||||||||| ||||||  | ||||||||||||||| ||||    
T  26342226 gtgttcctcaattttaggggcattggcactcgctatggttttactggcaatatcta 26342171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 26893688 - 26893609
Alignment:
Q  262 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||||| || |||||||||||||| |  || ||||| ||||| || |||||| |||||||||| |||||||| ||||||||    
T  26893688 ggaattcacaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaaga 26893609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 26974998 - 26975101
Alignment:
Q  238 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 337  Q
    ||||| || |||||| ||||||| |||||| | | ||||||||||||||| || ||| ||| ||| || ||||||||||| || ||| |||||  |||||    
T  26974998 ctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagcttaaaaaaggggacgaaatcacaccttcgctcctcaagagcattg 26975097  T
Q  338 aaga 341  Q
    ||||    
T  26975098 aaga 26975101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 28149912 - 28149986
Alignment:
Q  266 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    |||| |||||||||||||| |  || ||| || |||| || |||||||||||||||||| ||||||||||||||||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaaga 28149986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 341
Target Start/End: Original strand, 29467797 - 29467876
Alignment:
Q  262 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||||| || |||||||| |||||  | || ||||||| ||| || ||||||||||||||||||||||| || ||||||||    
T  29467797 ggaattcacaccttcatggatgatgaagaacttcaaaaaggcgaagaaatcacaccatcactcatcaaagctattgaaga 29467876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 28098650 - 28098596
Alignment:
Q  198 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctt 252  Q
    |||||||||||  ||||||||| | ||||||||||| ||||||||||| ||||||    
T  28098650 ttttaggggcaccgacactcggtatggttttactggaaatctctacaaagctctt 28098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 345
Target Start/End: Original strand, 28139368 - 28139594
Alignment:
Q  119 tctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcg 218  Q
    |||| ||| |||||||| | ||| ||||||| || ||  |||| || |||||||| || | |||| | || || ||||| || || |||| |||||||||    
T  28139368 tctctattttcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcg 28139467  T
Q  219 gcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacca 318  Q
       |||||| ||||| ||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| || |||||  ||||     
T  28139468 tttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccg 28139567  T
Q  319 tcactcatcaaggccattgaagaatct 345  Q
    |||||| | || |||||||||||||||    
T  28139568 tcactcgtaaaagccattgaagaatct 28139594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 224; Significance: 1e-123; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 42 - 345
Target Start/End: Complemental strand, 3858 - 3556
Alignment:
Q  42 aaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaa 141  Q
    ||||||| || || |||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||||    
T  3858 aaagacttcacataacagaccacaaaaatttac-cattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaa 3760  T
Q  142 tcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctct 241  Q
    |||||||||||||||||||||||||||||||| || |  |||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||    
T  3759 tcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctct 3660  T
Q  242 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  3659 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatga 3560  T
Q  342 atct 345  Q
    ||||    
T  3559 atct 3556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 42 - 345
Target Start/End: Complemental strand, 14790 - 14489
Alignment:
Q  42 aaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaa 141  Q
    ||||||| || |||||||| |||||||  ||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||    
T  14790 aaagacttcacatcacagaacacaaaat-ttactcattcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaa 14693  T
Q  142 tcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctct 241  Q
    ||||||||||||||| |||||||||||||||| || |  |||||||||||| ||||||||||||||| ||||||||||||||||||||| || |||||||    
T  14692 tcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctct 14593  T
Q  242 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  14592 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatga 14493  T
Q  342 atct 345  Q
    ||||    
T  14492 atct 14489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 42 - 219
Target Start/End: Complemental strand, 8238 - 8061
Alignment:
Q  42 aaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaa 141  Q
    ||||||| || |||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  8238 aaagacttcacatcacagaacacaaaaattcactcattcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaa 8139  T
Q  142 tcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcgg 219  Q
    ||||||||||||||||||||||| ||| |||| || |  |||||||||||||||||||||||||||| ||||||||||    
T  8138 tcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 42 - 345
Target Start/End: Complemental strand, 14069 - 13766
Alignment:
Q  42 aaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaa 141  Q
    |||||||  ||||||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||| |||||||||||| |||||||||| |||    
T  14069 aaagactttaaatcacagaccacaaaaacaaactcattcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaa 13970  T
Q  142 tcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctct 241  Q
    | ||||||||| |||||||||||||||| ||  || |  |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  13969 ttaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctct 13870  T
Q  242 acaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  13869 acaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaaga 13770  T
Q  342 atct 345  Q
    ||||    
T  13769 atct 13766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 53 - 345
Target Start/End: Complemental strand, 5102 - 4805
Alignment:
Q  53 atcacagaccacaaaaacttactc-----attcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcacct 147  Q
    ||||||||||||||||||||| ||     |||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  5102 atcacagaccacaaaaacttattcattaaattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcacct 5003  T
Q  148 tcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaagg 247  Q
    |||||||||||||||||||||||||| || |  |||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  5002 tcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaagg 4903  T
Q  248 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||    
T  4902 ctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatct 4805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 37 - 345
Target Start/End: Complemental strand, 352 - 51
Alignment:
Q  37 atattaaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggcta 136  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||||| | ||||||||||||||||||||||    
T  352 atattaaagactccacatcacagaccacaaaaacttactcattcatattct-------caaactcttttttcatctaatttctctcaattctcatggcta 260  T
Q  137 tacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaa 236  Q
    | ||||||||| |||| |||||||||||||| ||||  || |  |||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||    
T  259 tgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaa 160  T
Q  237 tctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccatt 336  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  159 tctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatc 60  T
Q  337 gaagaatct 345  Q
    |||||||||    
T  59 gaagaatct 51  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 37 - 345
Target Start/End: Original strand, 7277 - 7578
Alignment:
Q  37 atattaaagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggcta 136  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||||| | ||||||||||||||||||||||    
T  7277 atattaaagactccacatcacagaccacaaaaacttactcattcatattct-------caaactcttttttcatctaatttctctcaattctcatggcta 7369  T
Q  137 tacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaa 236  Q
    | ||||||||| |||| |||||||||||||| ||||  || |  |||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||    
T  7370 tgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaa 7469  T
Q  237 tctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccatt 336  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  7470 tctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatc 7569  T
Q  337 gaagaatct 345  Q
    |||||||||    
T  7570 gaagaatct 7578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 160; Significance: 3e-85; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 43 - 341
Target Start/End: Complemental strand, 18699821 - 18699525
Alignment:
Q  43 aagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaat 142  Q
    ||||||||| ||  |||||||||||||||||  |  ||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  18699821 aagactccacatttcagaccacaaaaacttaacc--tcatattctgcattctcaaactcttttttcatctagtttctctcaattctcatggctatgcaat 18699724  T
Q  143 caccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctcta 242  Q
    ||||||||||||||||||||||||||||| | || |  ||||||||||||||||| || ||||||| |||||||||  |||||||||||||| |||||||    
T  18699723 caccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctcta 18699624  T
Q  243 caaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||| ||||||||||||||||||||||| |||||||||||||||  ||| || ||||| || |||||||||| ||||||||||  ||| |||||||||||    
T  18699623 caaagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaaga 18699525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 53 - 341
Target Start/End: Complemental strand, 18731915 - 18731629
Alignment:
Q  53 atcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctc 152  Q
    |||||| ||||||||||||||  |  ||||||||||||||| ||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||||||    
T  18731915 atcacataccacaaaaacttaaac--tcatattctgcattctcaaactcttttttcatccagtttctctcgattttcatggctatgcaatcaccttcctc 18731818  T
Q  153 atcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctt 252  Q
    ||||||||||||||||||| | || |  ||||||||||||||||| || ||||||| |||||||||  |||||||||||||| |||||||||  ||||||    
T  18731817 atcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctctt 18731718  T
Q  253 actgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||||||||    
T  18731717 actgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaaga 18731629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 43 - 341
Target Start/End: Complemental strand, 18655898 - 18655602
Alignment:
Q  43 aagactccaaatcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaat 142  Q
    ||||||||| |||||| ||||||||||||||  |  ||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||  ||||    
T  18655898 aagactccacatcacataccacaaaaacttaaac--tcatattctgcattctcaaactcttttttcatccagtttctctcaattttcatggctaggcaat 18655801  T
Q  143 caccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctcta 242  Q
    ||||||||||||||||||||||||||||| | || |  ||||||||||||||||| || ||||||| |||||||||  |||||||||||||  |||||||    
T  18655800 caccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctcta 18655701  T
Q  243 caaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    ||| ||||||||||||||||||||||| |||||||||||||||  ||| || ||||| || |||||||||| ||||||||||  ||| |||||| ||||    
T  18655700 caaagctcttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaaga 18655602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 53 - 341
Target Start/End: Complemental strand, 18679978 - 18679692
Alignment:
Q  53 atcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctc 152  Q
    |||||| ||||||||||||||  |  ||||||||||||||| ||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||||||    
T  18679978 atcacataccacaaaaacttaaac--tcatattctgcattctcaaactcttttttcatccagtttctctctattttcatggctatgcaatcaccttcctc 18679881  T
Q  153 atcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctt 252  Q
    || |||||||||||||||| | || |  ||||||||||||||||| || ||||||| |||||||||  |||||||||||||  |||||||||||||||||    
T  18679880 attctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctctt 18679781  T
Q  253 actgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    |||||||| |||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||||||||    
T  18679780 actgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaaga 18679692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 119 - 341
Target Start/End: Complemental strand, 18724432 - 18724210
Alignment:
Q  119 tctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcg 218  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | || |  ||||||||||||||||| || ||||||| |||||||||    
T  18724432 tctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 18724333  T
Q  219 gcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacca 318  Q
      |||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||    
T  18724332 taacggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaacca 18724233  T
Q  319 tcactcatcaaggccattgaaga 341  Q
    ||||||  ||| |||||||||||    
T  18724232 tcactcgacaatgccattgaaga 18724210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 290
Target Start/End: Complemental strand, 17989454 - 17989226
Alignment:
Q  60 accacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctct 159  Q
    ||||||||||| | |||||||||||||||||||| ||||||||| |  ||||   |||||||||||||||||||| || |||| ||||| ||  ||||||    
T  17989454 accacaaaaacatcctcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctct 17989357  T
Q  160 tcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgaca 259  Q
    |||||||||||||  || |  ||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||    
T  17989356 tcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgaca 17989257  T
Q  260 agggaatccataccttcattgatgacaatga 290  Q
    ||||||| | |||||||  ||||||| ||||    
T  17989256 agggaattcgtaccttccatgatgacgatga 17989226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 290
Target Start/End: Original strand, 18073535 - 18073763
Alignment:
Q  60 accacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctct 159  Q
    ||||||||||| | |||||||||||||||||||| ||||||||| |  ||||   |||||||||||||||||||| || |||| ||||| ||  ||||||    
T  18073535 accacaaaaacatcctcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctct 18073632  T
Q  160 tcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgaca 259  Q
    |||||||||||||  || |  ||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||    
T  18073633 tcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgaca 18073732  T
Q  260 agggaatccataccttcattgatgacaatga 290  Q
    ||||||| | |||||||  ||||||| ||||    
T  18073733 agggaattcgtaccttccatgatgacgatga 18073763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 5091237 - 5091088
Alignment:
Q  196 agttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 295  Q
    |||||||| ||||  ||||||||  ||||||||||||| ||||||||  | |||||   || ||||||||| || ||||||||||||||||  || ||||    
T  5091237 agttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttc 5091138  T
Q  296 aaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    |  |||||||  |||| ||||| |||||  ||||||||||| ||||||||    
T  5091137 agcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatct 5091088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 6e-62; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 93 - 345
Target Start/End: Complemental strand, 28164735 - 28164483
Alignment:
Q  93 cccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttc 192  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||||| ||| | |||||| ||||||||| |||||||||| || | |||||||||||||    
T  28164735 cccaaactcttttctcatccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttc 28164636  T
Q  193 ctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatc 292  Q
    |||||||||||||||| |||||||||  ||||||| |||||| ||||||| ||||| |||   ||||||||||| || || |||||||||||   |||||    
T  28164635 ctcagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatc 28164536  T
Q  293 ttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    || | |||||||| ||||||||||| ||| ||||||||||||||||| |||||    
T  28164535 ttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatct 28164483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 119 - 341
Target Start/End: Complemental strand, 268704 - 268482
Alignment:
Q  119 tctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcg 218  Q
    ||||| ||||||||||||| |||||||||||||| ||||||||| | || ||||| |||   ||||| || |||||||  || || |||  |||||||||    
T  268704 tctcagttctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcg 268605  T
Q  219 gcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacca 318  Q
      | ||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| ||||    
T  268604 tgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaacca 268505  T
Q  319 tcactcatcaaggccattgaaga 341  Q
    ||||||  ||| |||||||||||    
T  268504 tcactcgacaatgccattgaaga 268482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 98 - 345
Target Start/End: Complemental strand, 28128042 - 28127800
Alignment:
Q  98 actcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcag 197  Q
    |||||||| ||||||| ||| | ||||||||||||||||| ||||||| ||||||      |||| |||||||||| || | ||||||||||||||||||    
T  28128042 actcttttctcatccaatttttgtcaattctcatggctatgcaatcacattcctc------ttcaatttcctatggattcacataccaagtgttcctcag 28127949  T
Q  198 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 297  Q
     || ||||||| |||||||||  ||||||| |||||| ||||||||||||| |||  ||||||||||||||| || |||||||||||   | ||||| |     
T  28127948 cttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatgattgtaatcttgag 28127849  T
Q  298 agaggag-atgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
    ||||||| |  |||||||||| |||||  | ||||||||||||||||||    
T  28127848 agaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatct 28127800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 126 - 341
Target Start/End: Complemental strand, 29274123 - 29273908
Alignment:
Q  126 tctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggt 225  Q
    |||||||||||| |||||||||||||| ||||||||| | || ||||| || |  ||||| || |||||||  ||||| |||  |||||||||  |||||    
T  29274123 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 29274024  T
Q  226 tttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactca 325  Q
    |||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||     
T  29274023 tttattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcg 29273924  T
Q  326 tcaaggccattgaaga 341  Q
     ||| | |||||||||    
T  29273923 acaatgtcattgaaga 29273908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 187 - 323
Target Start/End: Original strand, 31903746 - 31903882
Alignment:
Q  187 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 286  Q
    ||||||||||| ||||| ||| | ||||||||  | ||||||||||| ||||||||||| ||||||  ||| ||||||||||| ||||| ||||| ||      
T  31903746 gtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacctttattgacgatg 31903845  T
Q  287 atgatcttcaaagaggagatgaaatcacaccatcact 323  Q
    | || |||||||||||| |||||||||||||||||||    
T  31903846 aagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 290
Target Start/End: Original strand, 59343 - 59571
Alignment:
Q  60 accacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctct 159  Q
    ||||||||||| | |||||||||||||||||||| ||||||||| |  ||||   |||||||||||||||||||| || |||| ||||| ||  ||||||    
T  59343 accacaaaaacatcctcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctct 59440  T
Q  160 tcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgaca 259  Q
    |||||||||||||  || |  ||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||    
T  59441 tcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgaca 59540  T
Q  260 agggaatccataccttcattgatgacaatga 290  Q
    ||||||| | |||||||  ||||||| ||||    
T  59541 agggaattcgtaccttccatgatgacgatga 59571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 59; Significance: 6e-25; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 187 - 341
Target Start/End: Original strand, 34620 - 34774
Alignment:
Q  187 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 286  Q
    |||||||| |||||||| || | |||||||||  | |||||||| |  |||||||| |  ||||||  | ||||||||||||| ||||||||||||||||    
T  34620 gtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgaca 34719  T
Q  287 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
      || |||||| ||||||||||||| |||||||||||  ||||||||||||||||    
T  34720 gggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaaga 34774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 341
Target Start/End: Original strand, 116658 - 116845
Alignment:
Q  154 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 253  Q
    |||||||| ||||||||||| || |  ||  | |||||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  254 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  ||||||||||||||||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaaga 116845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 345
Target Start/End: Original strand, 27343 - 27501
Alignment:
Q  187 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 286  Q
    |||||||| |||||||| || |||||||||||  | ||||||||||| ||||||||||  | ||||  | | |||||||| || || ||| ||||||| |    
T  27343 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 27442  T
Q  287 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 345  Q
      || |||||| |||| |||||||| ||| |||||||  |||||| |||||||||||||    
T  27443 gagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatct 27501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 341
Target Start/End: Original strand, 42864 - 43015
Alignment:
Q  190 ttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 289  Q
    ||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  290 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 341  Q
    | |||| | |||| ||  |||| |||||||||||  ||||||||||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaaga 43015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 341
Target Start/End: Original strand, 16688944 - 16689060
Alignment:
Q  225 ttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 324  Q
    ||||||||| ||||| ||||| |||||   |||||||||||||| |  ||||||||||||||| || ||||| ||||| ||  ||||||||||||||||     
T  16688944 ttttactggtaatctgtacaaagctctatgtgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcactt 16689043  T
Q  325 atcaaggccattgaaga 341  Q
    |||||||| ||||||||    
T  16689044 atcaaggcaattgaaga 16689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 341
Target Start/End: Complemental strand, 58551 - 58420
Alignment:
Q  210 tgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaa 309  Q
    |||||||||  | ||||||||||| ||||||||||  ||||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || |||    
T  58551 tgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaa 58452  T
Q  310 atcacaccatcactcatcaaggccattgaaga 341  Q
    || |||||||||||  ||||||||||| ||||    
T  58451 ataacaccatcacttttcaaggccattaaaga 58420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 17993928 - 17993822
Alignment:
Q  235 aatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggcca 334  Q
    |||||||| || |||||| ||||||||||||| |  |||||||| |||||||| || ||||| ||||| |||||||||||||| || ||| |||||  ||    
T  17993928 aatctctataaagctctttctgacaagggaattcgaaccttcatcgatgacaaagagcttcagagaggtgatgaaatcacaccgtcgctcctcaagagca 17993829  T
Q  335 ttgaaga 341  Q
    |||||||    
T  17993828 ttgaaga 17993822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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