View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10329_low_7 (Length: 241)
Name: NF10329_low_7
Description: NF10329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10329_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 33378124 - 33377901
Alignment:
| Q |
1 |
tcttgcatcataaattccttctgccgaaatcttcaccgaataataagacatgttaaacaaggaattcttgtcagaaggcgaagaagacatcactgagagg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
33378124 |
tcttgcatcataaattccttctgccgaaatcttcaccgaataataagacatgttaaacaaggaattcttgtcagaaggcgaagaagacatcgctgagagg |
33378025 |
T |
|
| Q |
101 |
ctaatcttgtagctaatgttaaacaagctatcgttgttcaagattccagcatcaaattcacttcttgagaaggaaacggaagatgtagatacgtactcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
33378024 |
ctaatcttgtagctaatgttaaacaagctatcgttgttcaagattccagcatcaaattcacttcttgagatggaaacggaagatgtagatacgtactcat |
33377925 |
T |
|
| Q |
201 |
catcaacaaataagggagacgaag |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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| T |
33377924 |
catcaacaaataagggagacgaag |
33377901 |
T |
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