View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1032_low_5 (Length: 323)
Name: NF1032_low_5
Description: NF1032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1032_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 11 - 228
Target Start/End: Original strand, 43925693 - 43925910
Alignment:
| Q |
11 |
ataatatcaattgcatcgtccaccctgaaatagaatatcatagtacatgaacaaaataactttcacataatcatttcttatttggtcatatctaacctaa |
110 |
Q |
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| T |
43925693 |
ataatatcaattgcatcgtccaccctgaaatagaatatcatagtacatgaacaaaataactttcacataatcatttcttatttggtcatatctaacctaa |
43925792 |
T |
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| Q |
111 |
aagtctcaaaaaccatgaagcaagaaactacataccataccatatagcgtgggttggtttattcaaataatagacattatactaattttcaacattagtg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43925793 |
aagtctcaaaaaccatgaagcaagaaactacataccataccatatagcgtgggttggtttattcaaataatagacattatactaattttcaacattagtg |
43925892 |
T |
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| Q |
211 |
gtcctacttgattattag |
228 |
Q |
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|||||||||||||||||| |
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| T |
43925893 |
gtcctacttgattattag |
43925910 |
T |
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