View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1032_low_7 (Length: 251)

Name: NF1032_low_7
Description: NF1032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1032_low_7
NF1032_low_7
[»] chr7 (42 HSPs)
chr7 (11-251)||(22073181-22073419)
chr7 (38-251)||(16219358-16219572)
chr7 (87-240)||(16056604-16056757)
chr7 (11-218)||(12255409-12255614)
chr7 (34-218)||(2279756-2279941)
chr7 (38-236)||(47832088-47832287)
chr7 (38-250)||(16324272-16324485)
chr7 (47-240)||(9389346-9389541)
chr7 (58-251)||(44014438-44014633)
chr7 (65-251)||(68010-68198)
chr7 (56-204)||(21064822-21064971)
chr7 (57-202)||(810790-810936)
chr7 (57-214)||(12756378-12756535)
chr7 (57-200)||(18005963-18006101)
chr7 (50-202)||(15143691-15143844)
chr7 (87-217)||(44116804-44116933)
chr7 (57-218)||(17061621-17061783)
chr7 (57-208)||(38227788-38227940)
chr7 (34-151)||(2529615-2529733)
chr7 (50-127)||(28504955-28505033)
chr7 (60-153)||(14045187-14045281)
chr7 (60-153)||(14355217-14355311)
chr7 (57-209)||(9509495-9509649)
chr7 (50-131)||(16385912-16385994)
chr7 (50-131)||(40443762-40443844)
chr7 (50-130)||(15754541-15754622)
chr7 (70-153)||(12901768-12901852)
chr7 (60-153)||(14036637-14036731)
chr7 (60-153)||(14346667-14346761)
chr7 (60-152)||(1867650-1867743)
chr7 (50-131)||(27847498-27847580)
chr7 (58-130)||(3564026-3564099)
chr7 (160-209)||(26212302-26212351)
chr7 (109-201)||(35366540-35366631)
chr7 (162-201)||(9177431-9177470)
chr7 (57-130)||(12699218-12699292)
chr7 (161-211)||(15008263-15008313)
chr7 (163-236)||(12901609-12901682)
chr7 (70-150)||(15008118-15008199)
chr7 (160-209)||(40443695-40443744)
chr7 (50-105)||(11995712-11995768)
chr7 (45-150)||(17017040-17017146)
[»] scaffold0034 (2 HSPs)
scaffold0034 (11-251)||(32801-33039)
scaffold0034 (57-130)||(51545-51619)
[»] scaffold0556 (2 HSPs)
scaffold0556 (11-230)||(8302-8519)
scaffold0556 (57-251)||(7075-7271)
[»] chr6 (38 HSPs)
chr6 (11-240)||(23019683-23019910)
chr6 (38-231)||(25644607-25644801)
chr6 (38-251)||(27332926-27333140)
chr6 (38-251)||(27393666-27393880)
chr6 (50-201)||(22080391-22080543)
chr6 (47-198)||(25956272-25956424)
chr6 (57-251)||(4667874-4668069)
chr6 (57-251)||(4674721-4674916)
chr6 (65-251)||(19652459-19652647)
chr6 (57-251)||(4185484-4185679)
chr6 (57-251)||(4189221-4189416)
chr6 (57-217)||(18457014-18457174)
chr6 (57-202)||(29808544-29808691)
chr6 (34-152)||(9098087-9098206)
chr6 (57-202)||(28496134-28496280)
chr6 (57-131)||(20360632-20360707)
chr6 (57-209)||(29060847-29061000)
chr6 (57-209)||(19303202-19303355)
chr6 (50-131)||(20637948-20638030)
chr6 (50-130)||(1561689-1561770)
chr6 (34-153)||(20109578-20109698)
chr6 (161-236)||(19668653-19668728)
chr6 (90-209)||(25629050-25629169)
chr6 (160-251)||(31155163-31155254)
chr6 (50-131)||(18821484-18821566)
chr6 (57-130)||(22779888-22779962)
chr6 (50-131)||(16920298-16920380)
chr6 (163-201)||(17106048-17106086)
chr6 (57-130)||(18409488-18409562)
chr6 (160-209)||(11185808-11185857)
chr6 (160-209)||(16920399-16920448)
chr6 (163-196)||(18177438-18177471)
chr6 (163-196)||(18204400-18204433)
chr6 (160-201)||(18821585-18821626)
chr6 (160-209)||(20360726-20360775)
chr6 (89-201)||(16830111-16830223)
chr6 (87-151)||(19023814-19023878)
chr6 (47-152)||(19668812-19668918)
[»] scaffold0078 (1 HSPs)
scaffold0078 (34-240)||(10804-11011)
[»] chr5 (29 HSPs)
chr5 (11-236)||(26011652-26011875)
chr5 (11-218)||(22144348-22144553)
chr5 (38-251)||(21329137-21329352)
chr5 (34-251)||(5888813-5889032)
chr5 (34-251)||(21741181-21741400)
chr5 (57-251)||(22959194-22959390)
chr5 (57-218)||(21565842-21566004)
chr5 (158-251)||(21501917-21502009)
chr5 (38-163)||(21498659-21498785)
chr5 (57-218)||(11580906-11581068)
chr5 (50-250)||(21871225-21871426)
chr5 (50-250)||(21875505-21875706)
chr5 (50-218)||(1096765-1096934)
chr5 (57-209)||(21985808-21985961)
chr5 (57-251)||(19669163-19669360)
chr5 (47-218)||(36154479-36154651)
chr5 (57-207)||(23390157-23390309)
chr5 (34-151)||(20026501-20026619)
chr5 (45-153)||(22177792-22177901)
chr5 (50-131)||(21292635-21292717)
chr5 (57-209)||(24529527-24529681)
chr5 (50-130)||(19660491-19660572)
chr5 (67-130)||(9078338-9078402)
chr5 (163-201)||(25744036-25744074)
chr5 (160-209)||(9078259-9078308)
chr5 (160-209)||(21292736-21292785)
chr5 (160-209)||(22075325-22075374)
chr5 (50-130)||(22119847-22119928)
chr5 (162-210)||(20469654-20469702)
[»] scaffold0507 (1 HSPs)
scaffold0507 (34-250)||(7695-7912)
[»] scaffold0333 (2 HSPs)
scaffold0333 (38-251)||(6877-7092)
scaffold0333 (38-251)||(14257-14472)
[»] chr3 (48 HSPs)
chr3 (34-214)||(2050839-2051018)
chr3 (11-218)||(52523345-52523550)
chr3 (46-236)||(324515-324706)
chr3 (38-236)||(14234770-14234969)
chr3 (50-251)||(15471189-15471391)
chr3 (34-234)||(1465047-1465249)
chr3 (57-218)||(17247947-17248109)
chr3 (34-217)||(42386710-42386894)
chr3 (57-217)||(53070360-53070520)
chr3 (57-251)||(12933971-12934167)
chr3 (65-251)||(16097594-16097782)
chr3 (57-202)||(32307983-32308128)
chr3 (46-153)||(605941-606049)
chr3 (67-209)||(40213392-40213535)
chr3 (161-234)||(37250932-37251005)
chr3 (160-251)||(12171869-12171961)
chr3 (67-202)||(49667754-49667890)
chr3 (57-197)||(9513228-9513370)
chr3 (57-197)||(9521203-9521345)
chr3 (68-231)||(14572873-14573037)
chr3 (45-151)||(23275106-23275213)
chr3 (37-151)||(23412814-23412929)
chr3 (57-209)||(25476046-25476199)
chr3 (45-153)||(43927543-43927652)
chr3 (57-129)||(49389305-49389378)
chr3 (65-202)||(1644352-1644489)
chr3 (39-151)||(14501564-14501677)
chr3 (57-201)||(11424424-11424569)
chr3 (50-130)||(14179708-14179789)
chr3 (56-153)||(12378359-12378457)
chr3 (39-151)||(45797608-45797721)
chr3 (57-130)||(18438920-18438994)
chr3 (50-131)||(20698101-20698183)
chr3 (57-209)||(26687193-26687347)
chr3 (57-209)||(14973161-14973314)
chr3 (87-152)||(37250804-37250869)
chr3 (57-128)||(16104168-16104240)
chr3 (68-130)||(14576505-14576568)
chr3 (68-130)||(17488243-17488306)
chr3 (68-130)||(17499725-17499788)
chr3 (47-153)||(22109926-22110033)
chr3 (163-201)||(606135-606173)
chr3 (50-130)||(12340138-12340219)
chr3 (164-201)||(13210096-13210133)
chr3 (160-209)||(20698202-20698251)
chr3 (67-130)||(13442660-13442724)
chr3 (161-201)||(22110116-22110156)
chr3 (165-209)||(23083132-23083176)
[»] chr4 (36 HSPs)
chr4 (34-250)||(15099615-15099833)
chr4 (38-251)||(39705930-39706144)
chr4 (47-251)||(15190581-15190787)
chr4 (11-218)||(52242811-52243016)
chr4 (34-218)||(15464567-15464752)
chr4 (34-187)||(43198226-43198380)
chr4 (47-201)||(13844854-13845009)
chr4 (58-251)||(8846638-8846834)
chr4 (65-218)||(44928592-44928746)
chr4 (34-151)||(15868273-15868391)
chr4 (57-251)||(12774263-12774458)
chr4 (57-217)||(21814964-21815124)
chr4 (57-217)||(21815293-21815453)
chr4 (57-217)||(21818386-21818546)
chr4 (39-151)||(32851816-32851929)
chr4 (38-153)||(13415-13532)
chr4 (56-130)||(16597031-16597106)
chr4 (56-131)||(3097017-3097093)
chr4 (87-209)||(15091203-15091326)
chr4 (87-153)||(12287825-12287891)
chr4 (57-209)||(14038955-14039109)
chr4 (160-218)||(44102508-44102566)
chr4 (87-152)||(53081789-53081854)
chr4 (162-202)||(13616-13656)
chr4 (68-131)||(12903131-12903195)
chr4 (50-131)||(14052967-14053049)
chr4 (160-207)||(7089185-7089232)
chr4 (57-130)||(16239653-16239728)
chr4 (160-207)||(17047838-17047885)
chr4 (57-130)||(6190819-6190893)
chr4 (70-131)||(7089251-7089313)
chr4 (160-209)||(3096949-3096998)
chr4 (160-209)||(7799003-7799052)
chr4 (160-209)||(12903063-12903112)
chr4 (50-130)||(15552199-15552280)
chr4 (50-130)||(24029127-24029208)
[»] scaffold0138 (1 HSPs)
scaffold0138 (50-236)||(13220-13407)
[»] scaffold0020 (1 HSPs)
scaffold0020 (47-251)||(15481-15687)
[»] scaffold0116 (2 HSPs)
scaffold0116 (50-201)||(43438-43590)
scaffold0116 (50-201)||(47358-47510)
[»] chr8 (38 HSPs)
chr8 (34-240)||(39834107-39834315)
chr8 (38-240)||(6520644-6520847)
chr8 (38-251)||(38854893-38855107)
chr8 (125-240)||(21285874-21285989)
chr8 (65-251)||(21673969-21674157)
chr8 (65-251)||(23760509-23760696)
chr8 (70-202)||(19801101-19801234)
chr8 (57-218)||(41598482-41598644)
chr8 (65-251)||(26355367-26355555)
chr8 (44-151)||(13507657-13507765)
chr8 (44-151)||(13597189-13597297)
chr8 (34-152)||(20499024-20499143)
chr8 (87-209)||(22875372-22875494)
chr8 (50-209)||(20536514-20536675)
chr8 (47-126)||(21491382-21491462)
chr8 (57-231)||(23406665-23406841)
chr8 (50-127)||(5865931-5866009)
chr8 (57-209)||(6759563-6759717)
chr8 (50-127)||(17141302-17141380)
chr8 (56-131)||(45130691-45130767)
chr8 (45-153)||(17266565-17266674)
chr8 (57-130)||(18878898-18878972)
chr8 (45-153)||(982975-983084)
chr8 (67-153)||(17439100-17439187)
chr8 (11-82)||(21286656-21286724)
chr8 (50-130)||(21918664-21918745)
chr8 (67-153)||(24353463-24353550)
chr8 (56-217)||(21414887-21415049)
chr8 (57-130)||(7373135-7373209)
chr8 (57-130)||(18818071-18818145)
chr8 (160-202)||(21918766-21918808)
chr8 (57-126)||(22627125-22627195)
chr8 (50-131)||(31971629-31971711)
chr8 (160-209)||(18818175-18818224)
chr8 (50-130)||(21255605-21255686)
chr8 (67-153)||(37116787-37116874)
chr8 (87-131)||(25362843-25362887)
chr8 (161-201)||(37116664-37116704)
[»] chr2 (25 HSPs)
chr2 (34-218)||(23708257-23708441)
chr2 (50-218)||(25176140-25176309)
chr2 (47-231)||(23076726-23076910)
chr2 (57-231)||(23660307-23660482)
chr2 (57-209)||(298476-298629)
chr2 (161-236)||(23207559-23207634)
chr2 (67-251)||(28406243-28406429)
chr2 (50-127)||(23071617-23071695)
chr2 (34-153)||(18786446-18786566)
chr2 (87-209)||(22337422-22337544)
chr2 (57-126)||(22133878-22133948)
chr2 (70-153)||(22412733-22412817)
chr2 (57-130)||(22730894-22730968)
chr2 (57-126)||(22737841-22737911)
chr2 (50-131)||(23654064-23654146)
chr2 (161-214)||(22412900-22412953)
chr2 (70-153)||(23207717-23207801)
chr2 (50-131)||(23286235-23286317)
chr2 (57-130)||(27753961-27754035)
chr2 (57-209)||(32451590-32451744)
chr2 (56-131)||(37787-37863)
chr2 (161-218)||(20519957-20520014)
chr2 (87-131)||(20309479-20309523)
chr2 (70-153)||(20519790-20519874)
chr2 (165-201)||(31756232-31756268)
[»] scaffold0010 (3 HSPs)
scaffold0010 (65-251)||(130171-130359)
scaffold0010 (161-218)||(60479-60536)
scaffold0010 (70-153)||(60312-60396)
[»] scaffold0810 (1 HSPs)
scaffold0810 (57-251)||(3196-3392)
[»] chr1 (39 HSPs)
chr1 (34-251)||(28194086-28194305)
chr1 (50-251)||(22921521-22921724)
chr1 (57-251)||(52927642-52927837)
chr1 (34-251)||(35981325-35981543)
chr1 (57-240)||(33681284-33681469)
chr1 (87-250)||(20637115-20637279)
chr1 (47-164)||(43697712-43697830)
chr1 (60-251)||(20248541-20248734)
chr1 (57-240)||(22237905-22238089)
chr1 (57-211)||(433312-433467)
chr1 (57-251)||(21754301-21754495)
chr1 (68-209)||(50209885-50210027)
chr1 (34-151)||(21861132-21861250)
chr1 (161-218)||(26065238-26065295)
chr1 (58-209)||(34510087-34510239)
chr1 (34-151)||(21895870-21895989)
chr1 (34-151)||(16759091-16759209)
chr1 (50-131)||(22355839-22355921)
chr1 (50-131)||(22357525-22357607)
chr1 (167-251)||(49261605-49261690)
chr1 (34-151)||(21342513-21342631)
chr1 (34-151)||(21347378-21347496)
chr1 (57-208)||(22532577-22532729)
chr1 (70-153)||(26065357-26065441)
chr1 (50-131)||(27250394-27250476)
chr1 (168-214)||(35260852-35260898)
chr1 (87-153)||(50687031-50687097)
chr1 (67-153)||(16367881-16367968)
chr1 (67-127)||(20918990-20919051)
chr1 (162-218)||(16758949-16759005)
chr1 (70-153)||(35260729-35260813)
chr1 (57-131)||(20846891-20846966)
chr1 (47-153)||(41049619-41049726)
chr1 (50-131)||(38801056-38801138)
chr1 (160-202)||(38801157-38801199)
chr1 (162-199)||(21861335-21861372)
chr1 (160-209)||(22354338-22354387)
chr1 (87-151)||(16093508-16093572)
chr1 (89-201)||(24087730-24087842)
[»] scaffold0243 (1 HSPs)
scaffold0243 (34-249)||(5760-5976)
[»] scaffold0530 (1 HSPs)
scaffold0530 (34-249)||(666-888)
[»] scaffold0102 (1 HSPs)
scaffold0102 (57-251)||(19530-19726)
[»] scaffold1984 (1 HSPs)
scaffold1984 (57-240)||(405-590)
[»] scaffold0207 (1 HSPs)
scaffold0207 (65-251)||(2313-2500)
[»] scaffold0475 (1 HSPs)
scaffold0475 (57-251)||(9341-9536)
[»] scaffold0012 (2 HSPs)
scaffold0012 (67-159)||(227849-227942)
scaffold0012 (154-218)||(225705-225769)
[»] scaffold0125 (1 HSPs)
scaffold0125 (57-251)||(45450-45647)
[»] scaffold0621 (2 HSPs)
scaffold0621 (67-251)||(6800-6987)
scaffold0621 (162-202)||(8784-8824)
[»] scaffold0320 (1 HSPs)
scaffold0320 (34-183)||(12329-12478)
[»] scaffold0001 (1 HSPs)
scaffold0001 (57-251)||(160949-161145)
[»] scaffold0839 (1 HSPs)
scaffold0839 (67-218)||(1748-1900)
[»] scaffold0228 (3 HSPs)
scaffold0228 (57-209)||(4814-4968)
scaffold0228 (57-209)||(12396-12550)
scaffold0228 (57-209)||(22348-22502)
[»] scaffold0028 (1 HSPs)
scaffold0028 (57-202)||(132967-133113)
[»] scaffold0023 (2 HSPs)
scaffold0023 (87-240)||(39864-40018)
scaffold0023 (57-129)||(101781-101854)
[»] scaffold0503 (1 HSPs)
scaffold0503 (57-217)||(12228-12388)
[»] scaffold0555 (2 HSPs)
scaffold0555 (138-240)||(10283-10385)
scaffold0555 (56-116)||(10228-10289)
[»] scaffold0150 (1 HSPs)
scaffold0150 (57-202)||(32397-32543)
[»] scaffold0165 (4 HSPs)
scaffold0165 (35-153)||(27281-27400)
scaffold0165 (162-203)||(27485-27526)
scaffold0165 (50-131)||(3855-3937)
scaffold0165 (50-131)||(7919-8001)
[»] scaffold0142 (1 HSPs)
scaffold0142 (57-218)||(17078-17240)
[»] scaffold0218 (2 HSPs)
scaffold0218 (161-251)||(7841-7931)
scaffold0218 (51-126)||(28935-29011)
[»] scaffold0076 (1 HSPs)
scaffold0076 (45-153)||(24169-24279)
[»] scaffold0031 (1 HSPs)
scaffold0031 (57-217)||(20087-20247)
[»] scaffold0211 (1 HSPs)
scaffold0211 (57-251)||(28470-28666)
[»] scaffold0122 (1 HSPs)
scaffold0122 (57-209)||(25726-25879)
[»] scaffold0021 (6 HSPs)
scaffold0021 (57-164)||(62913-63021)
scaffold0021 (161-236)||(136132-136207)
scaffold0021 (161-236)||(144840-144915)
scaffold0021 (47-153)||(135942-136049)
scaffold0021 (47-153)||(144650-144757)
scaffold0021 (160-209)||(124891-124940)
[»] scaffold0016 (2 HSPs)
scaffold0016 (57-207)||(2159-2311)
scaffold0016 (45-124)||(119200-119280)
[»] scaffold0278 (1 HSPs)
scaffold0278 (57-143)||(5966-6053)
[»] scaffold0056 (3 HSPs)
scaffold0056 (57-209)||(16876-17029)
scaffold0056 (50-129)||(79016-79096)
scaffold0056 (173-217)||(79107-79151)
[»] scaffold0413 (2 HSPs)
scaffold0413 (57-202)||(15276-15422)
scaffold0413 (37-153)||(13007-13124)
[»] scaffold0292 (2 HSPs)
scaffold0292 (57-209)||(649-802)
scaffold0292 (67-208)||(3777-3920)
[»] scaffold0235 (2 HSPs)
scaffold0235 (37-151)||(14004-14119)
scaffold0235 (50-131)||(11178-11260)
[»] scaffold0217 (1 HSPs)
scaffold0217 (57-208)||(16260-16413)
[»] scaffold0145 (1 HSPs)
scaffold0145 (57-209)||(39067-39219)
[»] scaffold0075 (3 HSPs)
scaffold0075 (38-153)||(53113-53230)
scaffold0075 (162-202)||(53314-53354)
scaffold0075 (50-130)||(7948-8029)
[»] scaffold0357 (3 HSPs)
scaffold0357 (163-218)||(15866-15921)
scaffold0357 (87-153)||(13570-13636)
scaffold0357 (56-153)||(3133-3231)
[»] scaffold0080 (2 HSPs)
scaffold0080 (161-236)||(19649-19724)
scaffold0080 (160-230)||(40198-40268)
[»] scaffold0040 (2 HSPs)
scaffold0040 (47-153)||(103234-103341)
scaffold0040 (161-236)||(103403-103478)
[»] scaffold0022 (2 HSPs)
scaffold0022 (67-153)||(80701-80788)
scaffold0022 (161-201)||(128735-128775)
[»] scaffold0628 (1 HSPs)
scaffold0628 (57-202)||(2464-2609)
[»] scaffold0627 (1 HSPs)
scaffold0627 (65-209)||(211-356)
[»] scaffold0175 (2 HSPs)
scaffold0175 (50-127)||(34509-34587)
scaffold0175 (160-209)||(13398-13447)
[»] scaffold0161 (1 HSPs)
scaffold0161 (50-127)||(2099-2177)
[»] scaffold0011 (3 HSPs)
scaffold0011 (57-209)||(52218-52372)
scaffold0011 (50-126)||(167644-167721)
scaffold0011 (160-209)||(167745-167794)
[»] scaffold0876 (1 HSPs)
scaffold0876 (50-130)||(2739-2820)
[»] scaffold0395 (2 HSPs)
scaffold0395 (88-201)||(8185-8298)
scaffold0395 (57-128)||(623-695)
[»] scaffold0130 (2 HSPs)
scaffold0130 (37-153)||(1344-1461)
scaffold0130 (57-128)||(28924-28996)
[»] scaffold0120 (3 HSPs)
scaffold0120 (56-208)||(32619-32772)
scaffold0120 (56-208)||(46233-46386)
scaffold0120 (67-130)||(16473-16537)
[»] scaffold1137 (1 HSPs)
scaffold1137 (57-251)||(1962-2158)
[»] scaffold0647 (1 HSPs)
scaffold0647 (57-128)||(5782-5854)
[»] scaffold0601 (1 HSPs)
scaffold0601 (34-151)||(7095-7213)
[»] scaffold0598 (2 HSPs)
scaffold0598 (50-131)||(717-799)
scaffold0598 (160-209)||(818-867)
[»] scaffold0456 (1 HSPs)
scaffold0456 (56-131)||(10097-10173)
[»] scaffold0100 (1 HSPs)
scaffold0100 (57-203)||(20425-20572)
[»] scaffold0305 (1 HSPs)
scaffold0305 (57-201)||(20717-20863)
[»] scaffold0123 (1 HSPs)
scaffold0123 (67-153)||(25545-25632)
[»] scaffold0718 (1 HSPs)
scaffold0718 (50-131)||(4796-4878)
[»] scaffold0427 (1 HSPs)
scaffold0427 (50-131)||(13869-13951)
[»] scaffold0358 (4 HSPs)
scaffold0358 (50-131)||(310-392)
scaffold0358 (50-131)||(5086-5168)
scaffold0358 (160-208)||(243-291)
scaffold0358 (160-208)||(5019-5067)
[»] scaffold0352 (1 HSPs)
scaffold0352 (56-129)||(17668-17742)
[»] scaffold0266 (1 HSPs)
scaffold0266 (57-130)||(18619-18693)
[»] scaffold0098 (1 HSPs)
scaffold0098 (39-128)||(29149-29239)
[»] scaffold1842 (2 HSPs)
scaffold1842 (50-126)||(714-791)
scaffold1842 (160-209)||(815-864)
[»] scaffold0351 (1 HSPs)
scaffold0351 (47-127)||(16657-16738)
[»] scaffold0261 (2 HSPs)
scaffold0261 (57-127)||(16047-16118)
scaffold0261 (39-150)||(17909-18021)
[»] scaffold1419 (1 HSPs)
scaffold1419 (165-201)||(338-374)
[»] scaffold0121 (1 HSPs)
scaffold0121 (67-130)||(8203-8267)
[»] scaffold0114 (1 HSPs)
scaffold0114 (47-132)||(15127-15213)
[»] scaffold0737 (1 HSPs)
scaffold0737 (161-232)||(1562-1633)
[»] scaffold0540 (1 HSPs)
scaffold0540 (67-209)||(684-827)
[»] scaffold0109 (1 HSPs)
scaffold0109 (34-150)||(35508-35625)
[»] scaffold0005 (1 HSPs)
scaffold0005 (87-150)||(268094-268157)
[»] scaffold0484 (1 HSPs)
scaffold0484 (50-131)||(1288-1370)
[»] scaffold0403 (1 HSPs)
scaffold0403 (50-131)||(5222-5304)
[»] scaffold0389 (1 HSPs)
scaffold0389 (50-127)||(13262-13340)
[»] scaffold0113 (1 HSPs)
scaffold0113 (50-131)||(32438-32520)
[»] scaffold0088 (1 HSPs)
scaffold0088 (50-131)||(21275-21357)
[»] scaffold0026 (2 HSPs)
scaffold0026 (57-130)||(39592-39666)
scaffold0026 (67-130)||(40242-40306)
[»] scaffold0141 (1 HSPs)
scaffold0141 (160-209)||(39783-39832)
[»] scaffold0049 (1 HSPs)
scaffold0049 (160-209)||(74980-75029)
[»] scaffold0309 (1 HSPs)
scaffold0309 (160-208)||(6917-6965)
[»] scaffold0064 (1 HSPs)
scaffold0064 (50-131)||(47360-47442)
[»] scaffold0042 (1 HSPs)
scaffold0042 (67-130)||(23973-24037)
[»] scaffold0032 (1 HSPs)
scaffold0032 (68-131)||(51953-52017)


Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 22073419 - 22073181
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 109  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  22073419 cagagagtcgacatggtttcgtagt---tttgccccttaagttggaccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattct 22073323  T
Q  110 agaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22073322 agaatgagattgaacctagaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccag 22073223  T
Q  210 ttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  22073222 ttacagaatgctttgttaggttaaatgcgatccttgtcgcac 22073181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 16219358 - 16219572
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| ||||||||||| || ||||  | ||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  16219358 ttttgacctttaagttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagttt 16219457  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||  | ||||||||||| | |||||||||||||||    
T  16219458 aagaatgaatttttgggagttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagttgtctagttacagaatgccttgttaggttaaatg 16219557  T
Q  237 cgatacttgtcgcac 251  Q
    ||||  |||||||||    
T  16219558 cgatctttgtcgcac 16219572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 16056757 - 16056604
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagagg 186  Q
    ||||||||| ||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  16056757 taataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaattacacctgaactcgccatagcgagtagagg 16056658  T
Q  187 ccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgat 240  Q
    |  ||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  16056657 ctctcgcctcgcgagttacccagttacagaatgccttgttaggttaaatgcgat 16056604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 12255409 - 12255614
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 109  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||||   ||||| | |||||||||| ||||| | | ||||||||||||| |||||||||    
T  12255409 cagagagtcaacatgatttcgtagt---tttgatccttaagttggtatttagatgattttgagtgcttgaacatgtataataatgattaggaaagattct 12255505  T
Q  110 agaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||    
T  12255506 agattgagattgaacctggaatagtttaagaatgaatttttgggagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccag 12255605  T
Q  210 ttacagaat 218  Q
    |||||||||    
T  12255606 ttacagaat 12255614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 34 - 218
Target Start/End: Original strand, 2279756 - 2279941
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    |||||||||  ||||||||||    ||||| | |||||||||||||||| |||  ||||||||||||| ||||||| |||| |||||||||||||| |||    
T  2279756 gtagttttgatccttaagttgatatttagatgattttgagtgcctgaac-atgcataataatgattaggaaagattttagattgagattgaacctgtaat 2279854  T
Q  132 agtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||| |||||    
T  2279855 agtttaagaatggatttttgggtgttacacctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttatagaat 2279941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 47832287 - 47832088
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| | |||||||| ||||||||||||    
T  47832287 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatctggaatagttt 47832188  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 235  Q
    ||||| | ||||| | ||||||||| |||||||||||||||||||||||||| |||||||||||  | |||||||||||||| ||||| |||||||||||    
T  47832187 aagaacgaatttt-gagagttacacatgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaat 47832089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 250
Target Start/End: Complemental strand, 16324485 - 16324272
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||  | |||||||||||| ||||| | | ||||||||||||| |||||||  ||  |||||||||||||||||||||||    
T  16324485 ttttgacctttaagttgaaccttgaatgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaatagttt 16324386  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    ||||| | ||||||| |||||| |   ||||||||||||||||||||||||| |||||| ||||  | |||||||||||||| | |||||||||||||||    
T  16324385 aagaacgaatttttgagagttagattggaactcgccatggcgagtagaggccctcgccttgcgaactgcccagttacagaatgccttgttaggttaaatg 16324286  T
Q  237 cgatacttgtcgca 250  Q
     ||| |||||||||    
T  16324285 tgatccttgtcgca 16324272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 47 - 240
Target Start/End: Original strand, 9389346 - 9389541
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||||| ||||| || ||||||||||| ||| |||  | |||| |||||||| ||||||| |||| |||||||||||||||||||||||||||| | |    
T  9389346 ttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaacgaa 9389445  T
Q  146 tttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgat 240  Q
    ||| || |||||||| ||||||||||||||||||||||||||  |||||||||||| ||  |||||||||||| | ||| |||||||||| |||||    
T  9389446 tttatgtgagttacagctgaactcgccatggcgagtagaggctctcgcctcgcgagctaagcagttacagaatgccttgtttaggttaaaagcgat 9389541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 58 - 251
Target Start/End: Complemental strand, 44014633 - 44014438
Alignment:
Q  58 cttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagt 156  Q
    |||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||||| |||||||  |||    
T  44014633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgttagt 44014534  T
Q  157 tacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    | |||||||||||||||||| ||||||||||  |||||||||||| || || |||||||||| | ||| ||||||||||||||||  |||||||||    
T  44014533 tgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaaccggttacagaatgccttgtttaggttaaatgcgatcattgtcgcac 44014438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 68198 - 68010
Alignment:
Q  65 gtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacc 162  Q
    ||||| ||||||||||| |||||  |||||||||||| |||||||  ||| ||||||||||||||||||| ||||||||   | || |||||||||||      
T  68198 gttttcgagtgcctgaa-tatgtctaataatgattaggaaagattggagattgagattgaacctggaataatttaagaacaaacttgtgggagttacaga 68100  T
Q  163 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    |||||||||||||||||||||||||  |||||||||||| || ||||||||||||| | ||| |||||||||||||||| ||||||||||    
T  68099 tgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaatgcgatccttgtcgcac 68010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 56 - 204
Target Start/End: Original strand, 21064822 - 21064971
Alignment:
Q  56 accttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||||||| |||| |||| |||||||| |||||  ||||||||||| ||| ||| |||||||||||||||| ||||||||| | |||||||||||||| |    
T  21064822 accttagatgtttatgagggcctgaac-atgtacaataatgattaggaaatattttagaatgagattgaacttggaatagtgtcagaatggatttttgag 21064920  T
Q  154 agttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagtta 204  Q
     |||  |||| |||||||||||||||||||||||  |||||||| ||||||    
T  21064921 tgttttaccttaactcgccatggcgagtagaggctctcgcctcgtgagtta 21064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 810790 - 810936
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||| |||||||  ||||| |||||||||||||||    || |||||| ||||||| ||     
T  810790 ccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatttagaatgaatttttgtgaa 810889  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
     |  ||||||||||||||||||||||||||||  |||||||||||||    
T  810890 ctgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 12756378 - 12756535
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga-tttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||| || |||||||||| | ||||||| |    
T  12756378 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-tttaagaatgaactttttggaa 12756476  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttaca 214  Q
    | |  |||||||||| |||||||||||||||||  |||||||||||||| |||| |||||    
T  12756477 gctg-acctgaactcaccatggcgagtagaggctctcgcctcgcgagttgcccaattaca 12756535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 18006101 - 18005963
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||  |||||||      |||||||||||||  ||||||||||||| | | || ||||||    
T  18006101 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagatt------tgagattgaacctaaaatagtttaagaacgaacttgtgggag 18006008  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcga 200  Q
    ||| |||||||||||||||||||| |||||||| |||||||||||    
T  18006007 ttatacctgaactcgccatggcgactagaggccctcgcctcgcga 18005963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 202
Target Start/End: Original strand, 15143691 - 15143844
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||||||||||| ||||||| ||||||||||||||||||||||   ||| |||||| | ||    
T  15143691 agttgtaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatgaactt 15143790  T
Q  149 ttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    ||| || |   ||||| ||||||||||||||| ||||||  |||||||||||||    
T  15143791 ttgtgattctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagt 15143844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 44116933 - 44116804
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagagg 186  Q
    ||||||||||||| ||||| | ||||||||||||||||| |||| || || |||||| |  ||||||| |   ||||||||||||||||||||| |||||    
T  44116933 taataatgattaggaaagaatgtagaatgagattgaacccggaa-agatttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagagg 44116835  T
Q  187 ccatcgcctcgcgagttacccagttacagaa 217  Q
    |  ||||||||||||| || |||||||||||    
T  44116834 ctctcgcctcgcgagtgactcagttacagaa 44116804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 17061621 - 17061783
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatag-tttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||| |||| ||| |||||  |  |||| ||    
T  17061621 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-atagattttagaataaaactttgaga 17061719  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
     |   |||||||||||| |||||||||||||||  ||||||||||||| ||| | |||||||||    
T  17061720 atctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacagaat 17061783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 208
Target Start/End: Complemental strand, 38227940 - 38227788
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||||| || || ||||||  | |||| |||    
T  38227940 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa-agatttagaatgaaactttttgga 38227842  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccca 208  Q
     |   |||||||||||||| |||||| ||||||  ||||||||||||| |||||    
T  38227841 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccca 38227788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 2529615 - 2529733
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| ||||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||  ||| || |||| |||||||| |||||  |     
T  2529615 gtagttttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattggacctgacaa 2529713  T
Q  132 agtttaagaatggatttttg 151  Q
    ||||||| ||||||||||||    
T  2529714 agtttaaaaatggatttttg 2529733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 28504955 - 28505033
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 127  Q
    ||||| |||||||| |||||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  28504955 agttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 28505033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 14045281 - 14045187
Alignment:
Q  60 tagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||| ||||||||||||||||| ||||||  |||||||||||  ||| || |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  14045281 tagatgtttttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 14045187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 14355311 - 14355217
Alignment:
Q  60 tagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||| ||||||||||||||||| ||||||  |||||||||||  ||| || |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  14355311 tagatgtttttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 14355217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 9509649 - 9509495
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  ||||||  | || |||||    
T  9509649 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 9509550  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  9509549 ttctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccag 9509495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 16385912 - 16385994
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  16385912 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 16385994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 40443844 - 40443762
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  40443844 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaat 40443762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 15754541 - 15754622
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| |||||   ||||||||||||||||||||||    
T  15754541 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 15754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 12901852 - 12901768
Alignment:
Q  70 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 12901768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 14036731 - 14036637
Alignment:
Q  60 tagaggtttttgagtgcctgaactatgtaa--taatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||| ||||||||||||||||| |||||||  ||||||||||  ||| || |||| ||||||||||||| | | ||||||| ||||||||||||||    
T  14036731 tagatgtttttgagtgcctgaa-tatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttggg 14036637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 14346761 - 14346667
Alignment:
Q  60 tagaggtttttgagtgcctgaactatgtaa--taatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||| ||||||||||||||||| |||||||  ||||||||||  ||| || |||| ||||||||||||| | | ||||||| ||||||||||||||    
T  14346761 tagatgtttttgagtgcctgaa-tatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttggg 14346667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 1867650 - 1867743
Alignment:
Q  60 tagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgg 152  Q
    |||| |||||| |||||||||| ||||||  |||||||||||  ||| || |||| ||||||||||||||| | ||||||| |||||||||||||    
T  1867650 tagatgttttttagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 1867743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 27847498 - 27847580
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | |||| |||||||| ||||| | ||| |||||||||||||||||||    
T  27847498 agttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctggaat 27847580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 3564026 - 3564099
Alignment:
Q  58 cttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    |||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  3564026 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 3564099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 26212351 - 26212302
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||||||||||  ||||||||||||| ||||||    
T  26212351 acctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccag 26212302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 35366631 - 35366540
Alignment:
Q  109 tagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||||| ||||||||| | |||||||||| ||| | |||  |||  |||||||| |||||||| |||||  ||||||||||||    
T  35366631 tagaatgagattgaacttggaatagtgtcagaatggattcttgagtgttttaccctaactcgccgtggcgagt-gaggctctcgcctcgcgag 35366540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 9177431 - 9177470
Alignment:
Q  162 ctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  9177431 ctgaactcgccatagcgagtagaggccctcgcctcgcgag 9177470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 12699292 - 12699218
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||| |||||||||||||    
T  12699292 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaa 12699218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 15008263 - 15008313
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagtt 211  Q
    ||||||||| |||| ||||||||||||  |||||||||||||| |||||||    
T  15008263 cctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagtt 15008313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 12901682 - 12901609
Alignment:
Q  163 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    |||||||||||| ||||||||||||  ||||||| ||||||  ||| ||||| ||  | |||||||||||||||    
T  12901682 tgaactcgccatagcgagtagaggctctcgcctcacgagttgtccatttacaaaacaccttgttaggttaaatg 12901609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 15008118 - 15008199
Alignment:
Q  70 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattttt 150  Q
    ||||||||||||| | | |||||||||||||| ||  || |||| ||||||||||||||| | ||||| | |||||||||||    
T  15008118 tgagtgcctgaacatgtataataatgattagacaattttttagattgagattgaacctgggaaagttttaaaatggattttt 15008199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 40443744 - 40443695
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  40443744 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 40443695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 11995712 - 11995768
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaaga 105  Q
    ||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||    
T  11995712 agttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 17017040 - 17017146
Alignment:
Q  45 ccttaagttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaat 142  Q
    |||||||||| || ||||| | ||||||||||||||| |||||  ||||||||||||  ||| || |||| |||||||||||  |  | ||||||| |||    
T  17017040 ccttaagttgaactttagatgattttgagtgcctgaa-tatgtacaataatgattaggcaagtttttagattgagattgaacaagagaaagtttaaaaat 17017138  T
Q  143 ggattttt 150  Q
    ||||||||    
T  17017139 ggattttt 17017146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 33039 - 32801
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 109  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||| || ||||| | || ||||||||||||| | ||||||||||||||| |||||||||    
T  33039 cagagagtcaacatgatttcgtagt---tttggtccttaagttgaactttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattct 32943  T
Q  110 agaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  32942 agattgagattgaacttggaatagtctaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccag 32843  T
Q  210 ttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||| | ||||| |||||||||||||  |||||||||    
T  32842 ttacagaatgccttgttgggttaaatgcgatctttgtcgcac 32801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 51545 - 51619
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| | ||| | ||| ||||||||||||||||||    
T  51545 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 51619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 8519 - 8302
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 109  Q
    ||||||||| ||||| |||||||||   |||| ||||||||||| |||||| | ||||||| ||| |||||  | |||||||||||||||||||||||||    
T  8519 cagagagtcaacatgatttcgtagt---tttgacccttaagttgaaccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattct 8423  T
Q  110 agaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||||    
T  8422 agattgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtggaggccctcgcctcgcgagttgtccag 8323  T
Q  210 ttacagaattctttgttaggt 230  Q
    ||||| ||| |||||||||||    
T  8322 ttacataatgctttgttaggt 8302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 7271 - 7075
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||||| ||||||| ||     
T  7271 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtgaa 7172  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
     |  ||||||||||||||||||||||||||||  |||||| ||||| || | ||||||||||| | ||| |||||||||||||||| ||||||||||    
T  7171 ctgaacctgaactcgccatggcgagtagaggctctcgccttgcgagctaactagttacagaatgccttgtttaggttaaatgcgattcttgtcgcac 7075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 23019910 - 23019683
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 109  Q
    ||||||||| ||||| |||||||||   |||| ||||||||||| |||||||| | |||||||||||||||| | ||| ||||||||||| ||||||| |    
T  23019910 cagagagtcaacatgatttcgtagt---tttgacccttaagttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagatttt 23019814  T
Q  110 agaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    ||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  |||     
T  23019813 agattgagattgaacctggaatattttaagaatgaatttttgggagttacacctgaactcgccatggcgagtagaggcccttgcctcgcgagttgtccaa 23019714  T
Q  210 ttacagaattctttgttaggttaaatgcgat 240  Q
    ||||| ||| ||| |||||||||||||||||    
T  23019713 ttacaaaatgcttggttaggttaaatgcgat 23019683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 231
Target Start/End: Complemental strand, 25644801 - 25644607
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgtaataa---tgattagaaaagattctagaatgagattgaacctggaatagt 134  Q
    ||||| || |||||||| |||||||| |||||||||||||||  | ||||| |||   ||||||| ||||||| |||| |||||||||||||| ||||||    
T  25644801 ttttgacctttaagttgaaccttagatgtttttgagtgcctgttc-atgta-taacgttgattaggaaagattttagattgagattgaacctgaaatagt 25644704  T
Q  135 ttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtt 231  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||| ||| |||||| |||  |||||||    
T  25644703 ttaagaatggatttttgggagttacacccgaactcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatgcttgtttaggtt 25644607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 27332926 - 27333140
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| | ||||||||| |||||| | | |||| |||||||| ||||||| ||||||||| ||||||||||||   |||    
T  27332926 ttttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattt 27333025  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
     |||||| | ||||| ||||| |||||||||||||||||||||||||||||  |||||||||||  | |||| ||||||||| |||||||||||||||||    
T  27333026 tagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgttaggttaaatg 27333125  T
Q  237 cgatacttgtcgcac 251  Q
     ||| ||||||||||    
T  27333126 tgatccttgtcgcac 27333140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 27393666 - 27393880
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| | ||||||||| |||||| | | |||| |||||||| ||||||| ||||||||| ||||||||||||   |||    
T  27393666 ttttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattt 27393765  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
     |||||| | ||||| ||||| |||||||||||||||||||||||||||||  |||||||||||  | |||| ||||||||| |||||||||||||||||    
T  27393766 tagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgttaggttaaatg 27393865  T
Q  237 cgatacttgtcgcac 251  Q
     ||| ||||||||||    
T  27393866 tgatccttgtcgcac 27393880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 201
Target Start/End: Original strand, 22080391 - 22080543
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| ||||||||||| |||||| | | |||||||||||||||||||||  ||| | |||||||||||||||||||||||||| | | ||    
T  22080391 agttgaaccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacgaactt 22080490  T
Q  149 ttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
     ||||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  22080491 atgggagttatacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 198
Target Start/End: Original strand, 25956272 - 25956424
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||||| | ||||||  ||||||||||||||||| | | |||| | |||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  25956272 ttaagttgaatcttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacctggaatagtttaagaatgga 25956371  T
Q  146 tttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgc 198  Q
    ||||| ||||||||||||| | ||||||||||||||||||||  |||||||||    
T  25956372 ttttttggagttacacctgtattcgccatggcgagtagaggctctcgcctcgc 25956424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 4667874 - 4668069
Alignment:
Q  57 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat-agtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | |||||| |||||| ||||| | |||| |||||||| ||||||||  |||||| ||||| ||||||| ||    
T  4667874 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtga 4667972  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
      |  ||||||||||||||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||||||||||||||| ||||||||||    
T  4667973 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaatgcgatccttgtcgcac 4668069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 4674721 - 4674916
Alignment:
Q  57 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat-agtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | |||||| |||||| ||||| | |||| |||||||| ||||||||  |||||| ||||| ||||||| ||    
T  4674721 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtga 4674819  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
      |  |||| |||||| ||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||||||||||||||| ||||||||||    
T  4674820 actgaaccttaactcgtcatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaatgcgatccttgtcgcac 4674916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 19652647 - 19652459
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacct 163  Q
    |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||    || |||||| ||||||| || ||  ||||    
T  19652647 gtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactttagaatgaatttttgtgaattgtacct 19652548  T
Q  164 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||||||||||||||||||  |||||||||| | || | ||||||| ||| | ||| ||||| ||||||||||  |||||||||    
T  19652547 gaactcgccatggcgagtagaggctctcgcctcgcgggctaactagttacaaaataccttgtttaggataaatgcgatctttgtcgcac 19652459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 4185484 - 4185679
Alignment:
Q  57 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat-agtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||| ||||| | | |||||| |||||  ||||| | |||| |||||||||||||||||  |||||| ||||| ||||||| ||    
T  4185484 ccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagttta-gaatgaatttttgtga 4185582  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
      |  ||||||||||||||||||||||||||||  |||||||||||| |||||| ||| ||||| | ||| ||||||||||||||| |||| |||||    
T  4185583 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttatagaatgccttgctaggttaaatgcgatccttgccgcac 4185679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 4189416 - 4189221
Alignment:
Q  57 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat-agtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | |||||| |||||| ||||| | |||| |||||||| ||||||||  |||||| ||||| ||||||| ||    
T  4189416 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtga 4189318  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
      |  |||| |||||| ||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| |||||||||||||||  |||||||||    
T  4189317 actgaacctaaactcgtcatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaatgcgatcgttgtcgcac 4189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 18457174 - 18457014
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga-tttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||| || || ||||||| | ||||||| |    
T  18457174 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttggaa 18457076  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
    | |  ||||||||| ||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  18457075 gctg-acctgaactagccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 18457014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 29808544 - 29808691
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg-aatagtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | |||||||||||||||||||| || | ||| |||||| |  |||||||    
T  29808544 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 29808643  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
     |   ||||||||||||||||||||| ||||||  |||||||||||||    
T  29808644 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 9098087 - 9098206
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaact-atgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| ||||||||| | || ||||| | || |||||||||||||  || |||||||||||||| ||| ||||||| ||| ||||||||||| | |    
T  9098087 gtagttttgacccttaagtcgaactttagatgattctgagtgcctgaacagatataataatgattagacaagtttctagattgatattgaacctgggaaa 9098186  T
Q  133 gtttaagaatggatttttgg 152  Q
    |||||| |||||||||||||    
T  9098187 gtttaaaaatggatttttgg 9098206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 28496134 - 28496280
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | |||||||||||||||||||||| ||  | ||||||  | ||||| ||    
T  28496134 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa-agacttagaatgaaacttttgaga 28496232  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
     |   ||||||||||||||||||||| ||||||  |||||||||||||    
T  28496233 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 20360632 - 20360707
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  20360632 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 29061000 - 29060847
Alignment:
Q  57 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| ||||  |||||||||||| || || | ||| ||||||||||||||||||   ||  |||||| | |||||| |    
T  29061000 ccttagatgcttttgagtgcctgaac-atgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtagaatgaacttttggaa 29060902  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| | |||||||||||  ||||||||||||| ||||||    
T  29060901 atctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccag 29060847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 19303202 - 19303355
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||| ||| || || ||||||  | |||||| |    
T  19303202 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 19303300  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| |||||| ||||||  |||||||| |||| ||||||    
T  19303301 atctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccag 19303355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 20637948 - 20638030
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  20637948 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20638030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 1561770 - 1561689
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| |||||   ||||||||||||||||||||||    
T  1561770 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 1561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 20109698 - 20109578
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    |||||||||  |||||||||| || ||||| | || ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||| | | |    
T  20109698 gtagttttgatccttaagttgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctaggaaa 20109599  T
Q  133 gtttaagaatggatttttggg 153  Q
    |||||| |||||||| |||||    
T  20109598 gtttaaaaatggattattggg 20109578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 19668728 - 19668653
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    |||||||||||||| ||||||||||||  |||||||||||| |  ||| ||||||||  | |||||||||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgagctgtccaattacagaacaccttgttaggttaaatg 19668653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 25629050 - 25629169
Alignment:
Q  90 taatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggcca 189  Q
    |||||||||| ||| ||| ||||||||||||||||||||||   ||| |||||  | ||||| || |   ||||| ||||||| ||||||| ||||||      
T  25629050 taatgattaggaaatattgtagaatgagattgaacctggaaatattttagaataaacttttgtgattatgacctgtactcgccgtggcgagcagaggctc 25629149  T
Q  190 tcgcctcgcgagttacccag 209  Q
    ||||||||||||| ||||||    
T  25629150 tcgcctcgcgagtgacccag 25629169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 31155163 - 31155254
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
    ||||| |||| |||||||||| ||||||  |||||||||||| |||||  |||||  || | ||||||||||||||||| | ||||||||||    
T  31155163 acctgtactctccatggcgagcagaggctctcgcctcgcgagctacccctttacaacatgccttgttaggttaaatgcggtccttgtcgcac 31155254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 18821484 - 18821566
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| | ||| | ||| |||||||||||||||||||    
T  18821484 agttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaat 18821566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 22779888 - 22779962
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  22779888 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22779962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 16920298 - 16920380
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | ||||||||||||||| |||||  |||||||||||||||||| | ||| || |||||| |||||||||    
T  16920298 agttgaaccttagatgcttttgagtgcctgaa-tatgtctaataatgattagaaaagaatgtaggataagattgtacctggaat 16920380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 17106086 - 17106048
Alignment:
Q  163 tgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  17106086 tgaactcgccatggcgagtagaggccctcgactcgcgag 17106048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 18409488 - 18409562
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||| ||| | | || |||||||||| ||||| | ||||||||||||||||||||||    
T  18409488 ccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaa 18409562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 11185857 - 11185808
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||| |||||||| |||| ||||||    
T  11185857 acctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccag 11185808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 16920399 - 16920448
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    ||||||||||||||||||||| ||||||  |||||| |||||| ||||||    
T  16920399 acctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccag 16920448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 18177438 - 18177471
Alignment:
Q  163 tgaactcgccatggcgagtagaggccatcgcctc 196  Q
    |||||||||||||||||||||||||| |||||||    
T  18177438 tgaactcgccatggcgagtagaggccctcgcctc 18177471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 18204433 - 18204400
Alignment:
Q  163 tgaactcgccatggcgagtagaggccatcgcctc 196  Q
    |||||||||||||||||||||||||| |||||||    
T  18204433 tgaactcgccatggcgagtagaggccctcgcctc 18204400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 18821585 - 18821626
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    ||||||||||||||||||||| ||||||  ||||||||||||    
T  18821585 acctgaactcgccatggcgagcagaggctctcgcctcgcgag 18821626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 20360726 - 20360775
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||||||||||  |||||  ||||||||||||| ||||||    
T  20360726 acctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccag 20360775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 16830223 - 16830111
Alignment:
Q  89 ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggcc 188  Q
    |||||||||||  ||  || ||||||||||||||||  ||||  |  | |||||||||| ||| | |||  |||| |||||||| ||||||||||||||     
T  16830223 ataatgattaggcaaagttttagaatgagattgaactcggaaatgagtcagaatggattcttgagcgttttaccttaactcgccgtggcgagtagaggct 16830124  T
Q  189 atcgcctcgcgag 201  Q
     ||||||||||||    
T  16830123 ctcgcctcgcgag 16830111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 19023878 - 19023814
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttg 151  Q
    |||||||||||||  ||| || |||| ||||||||||||||  | ||||||| ||||||||||||    
T  19023878 taataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttg 19023814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 19668918 - 19668812
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgg 144  Q
    |||||| | |||||||| |||| |||||| |||||| |||||  |||||||||||| ||| || || | |||||||||||||||   ||||||| ||||     
T  19668918 ttaagtcgaaccttagatgtttctgagtgtctgaac-atgtatcataatgattagacaagtttttatattgagattgaacctggggaagtttaaaaatga 19668820  T
Q  145 atttttgg 152  Q
    ||||||||    
T  19668819 atttttgg 19668812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 11011 - 10804
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    |||||||||  |||||||||| | |||||| |||||||||||||||||| | ||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  11011 gtagttttgatccttaagttgaatcttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaata 10912  T
Q  133 gtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtta 232  Q
    ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |||| || ||| | |||||||||||    
T  10911 gtttaagaatgaatttttgtgagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacctagttccaaaatgccttgttaggtta 10812  T
Q  233 aatgcgat 240  Q
    ||||||||    
T  10811 aatgcgat 10804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 26011652 - 26011875
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 109  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||| || ||||| | || |||||| || ||| | ||||||||||||||  |||||||||    
T  26011652 cagagagtcaacatgatttcgtagt---tttgatccttaagttgaactttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattct 26011748  T
Q  110 agaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||    
T  26011749 aaattgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccttcgcctcgcgagttgtctag 26011848  T
Q  210 ttacagaattctttgttaggttaaatg 236  Q
    ||||||||| |||||||||||||||||    
T  26011849 ttacagaatgctttgttaggttaaatg 26011875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 22144553 - 22144348
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 109  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||||   ||||| | |||||||||||||||| | ||||| ||||||||| |||||||||    
T  22144553 cagagagtcaacatgatttcgtagt---tttgatccttaagttggtatttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattct 22144457  T
Q  110 agaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||    
T  22144456 agattgagattgaacctggaataatttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccag 22144357  T
Q  210 ttacagaat 218  Q
    |||||||||    
T  22144356 ttacagaat 22144348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 21329137 - 21329352
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| |||||||||||||||||| | | || | ||||||||||||||||||||| ||||||||||||||||||| |||    
T  21329137 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataattt 21329236  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 235  Q
    | ||||| ||||||||||||| ||| |||||||||||| ||||||||||||  ||||||||||| ||||| ||||||||||| | ||| |||||||||||    
T  21329237 aggaatgaatttttgggagttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtttaggttaaat 21329336  T
Q  236 gcgatacttgtcgcac 251  Q
    |||||  |||||||||    
T  21329337 gcgatctttgtcgcac 21329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 34 - 251
Target Start/End: Original strand, 5888813 - 5889032
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| || |||||| | | |||||| ||||||||||||||||||| ||||  || |||||||| ||||||| |||| ||||||||||| ||||||    
T  5888813 gtagttttgacctttaagtcgaagcttagatgtttttgagtgcctgaact-tgtatgatgatgattaggaaagattgtagattgagattgaacatggaat 5888911  T
Q  132 agtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggt 230  Q
    |||||||||||| || |||| ||||| |||||||||||||||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||||||    
T  5888912 agtttaagaatgaatctttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtttaggt 5889011  T
Q  231 taaatgcgatacttgtcgcac 251  Q
    ||||||||||  |||||||||    
T  5889012 taaatgcgatctttgtcgcac 5889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 251
Target Start/End: Original strand, 21741181 - 21741400
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| || |||||| | ||||||||  |||||||||||||||||| ||||  || |||| ||| ||||||| |||| ||||||||||||||||||    
T  21741181 gtagttttgacctttaagtcgaaccttagatatttttgagtgcctgaact-tgtatgatgatgaataggaaagattatagattgagattgaacctggaat 21741279  T
Q  132 agtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggt 230  Q
    |||||||||| | |||| || ||||| |||||||||||||||||||||||||||||  |||||||| ||| || ||||||||| ||| ||||  ||||||    
T  21741280 agtttaagaacgaatttatgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgtgagctaaccagttacataatgtcttgtttaggt 21741379  T
Q  231 taaatgcgatacttgtcgcac 251  Q
    |||| |||||  |||||||||    
T  21741380 taaaagcgatctttgtcgcac 21741400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 22959194 - 22959390
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga-atagtttaagaatggatttttggga 154  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||| | | |||| ||||| ||||||| ||    
T  22959194 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagacttta-gaatgaatttttgtga 22959292  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
      |  ||||||||||||||||||||||||||||  |||||||||||| || | ||||||||||| | ||| |||||||||||||||| ||||| ||||    
T  22959293 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggttaaatgcgattcttgttgcac 22959390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 218
Target Start/End: Complemental strand, 21566004 - 21565842
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||||| ||||| | ||     
T  21566004 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttcgtgaa 21565905  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    ||  ||||||||||||||||||||| ||||||  |||||||| ||| || | |||||||||||    
T  21565904 ttgtacctgaactcgccatggcgagcagaggctctcgcctcgtgagctaactagttacagaat 21565842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 21501917 - 21502009
Alignment:
Q  158 acacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||| | ||||| |||||||||||||| |||||||||    
T  21501917 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagtt-cagaatgccttgttgggttaaatgcgatatttgtcgcac 21502009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 163
Target Start/End: Original strand, 21498659 - 21498785
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| ||||| || |||||||||||||||||| | | ||||||| ||||| | ||||| |||| ||||||||||||||||||||||     
T  21498659 ttttgacctttaagttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctggaatagttg 21498758  T
Q  137 aagaatggatttttgggagttacacct 163  Q
    ||||||  ||||||| |||||||||||    
T  21498759 aagaataaatttttgagagttacacct 21498785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 11580906 - 11581068
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatag-tttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||| ||| ||| |||||  |  |||| ||    
T  11580906 ccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgga-tagattttagaataaaactttgaga 11581004  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
     |   ||||||||||||||||||||| ||||||  ||||||||||||| ||||| |||||||||    
T  11581005 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccatttacagaat 11581068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 250
Target Start/End: Original strand, 21871225 - 21871426
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaag-aatggatt 147  Q
    ||||| |||||||| | |||||||||||||||| | | || |||||||||| ||||| | ||| |||||||||||||||||| || ||| | |||||| |    
T  21871225 agttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaa-agattatggaatggact 21871323  T
Q  148 tttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtc 247  Q
    |||| || |   ||||| ||||||||||||||||||||||   || |||||||| || |||  |||||||| | ||| ||||||||| ||||| ||||||    
T  21871324 tttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaatacagaatgccttgctaggttaaacgcgatccttgtc 21871423  T
Q  248 gca 250  Q
    |||    
T  21871424 gca 21871426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 250
Target Start/End: Original strand, 21875505 - 21875706
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaag-aatggatt 147  Q
    ||||| |||||||| | |||||||||||||||| | | || |||||||||| ||||| | ||| |||||||||||||||||| || ||| | |||||| |    
T  21875505 agttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaa-agattatggaatggact 21875603  T
Q  148 tttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtc 247  Q
    |||| || |   ||||| ||||||||||||||||||||||   || |||||||| || |||  |||||||| | ||| ||||||||| ||||| ||||||    
T  21875604 tttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaatacagaatgccttgctaggttaaacgcgatccttgtc 21875703  T
Q  248 gca 250  Q
    |||    
T  21875704 gca 21875706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 218
Target Start/End: Complemental strand, 1096934 - 1096765
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||| ||||||   ||  |||||| | ||    
T  1096934 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattgcagaatgaactt 1096835  T
Q  149 ttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |||| | |   |||||||||||||| |||||||||||||  ||||||||||||| ||||||  |||||||    
T  1096834 ttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaat 1096765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 21985808 - 21985961
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||||| || || ||||||  | |||||| |    
T  21985808 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa-agatttagaatgaaacttttggaa 21985906  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| ||| || ||||||| ||||||||||||| ||||||    
T  21985907 ttctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccag 21985961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 19669360 - 19669163
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgg-ga 154  Q
    ||||||| ||||||||||| |||||| | | ||||||||||||| |||||||   |||||||||||||| |||||    || |||||| |||||| | ||    
T  19669360 ccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactttagaatgaattttttgtga 19669261  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
     ||  ||||||||||||||||||| ||||||||  ||||||| | || || | ||||||||||| | ||| ||||| |||||| ||| ||||||||||    
T  19669260 attgtacctgaactcgccatggcgtgtagaggctctcgcctcaccagctaactagttacagaatgccttgtttaggataaatgtgattcttgtcgcac 19669163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 36154479 - 36154651
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatag-tttaagaatgg 144  Q
    ||||||||  ||||||| | |||||||||| ||||| | | ||||||||||||| ||||| | |||| |||||||||||||||| ||| ||| |||||      
T  36154479 ttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctgga-tagattttagaataa 36154577  T
Q  145 atttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |  |||| || |   ||||||||||||||||||||||||||||  ||||||||||||| ||| | |||||||||    
T  36154578 aactttgagaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaat 36154651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 23390157 - 23390309
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttt-tggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  |||||| |  || |||||    
T  23390157 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 23390256  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccc 207  Q
     |   |||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  23390257 ttctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccc 23390309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 20026501 - 20026619
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| ||||||||| |  | ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||| ||| | |    
T  20026501 gtagttttgacccttaagtcgatctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaa 20026600  T
Q  133 gtttaagaatggatttttg 151  Q
    |||||| ||||||||||||    
T  20026601 gtttaaaaatggatttttg 20026619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 22177792 - 22177901
Alignment:
Q  45 ccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaat 142  Q
    |||||||||| ||| |||| | ||||||||||||||| ||||||  |||||||||||  ||| || |||| |||| |||||||||  | ||||||| |||    
T  22177792 ccttaagttgaaccctagatgattttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagtttgaacctgagaaagtttaaaaat 22177890  T
Q  143 ggatttttggg 153  Q
    |||||||||||    
T  22177891 ggatttttggg 22177901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 21292635 - 21292717
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||| ||||| ||||| | ||| |||||||||||||||||||    
T  21292635 agttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctggaat 21292717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 24529681 - 24529527
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||| ||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||  |||  ||||||  | |||||| |    
T  24529681 ccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaggttgtagaatgaaacttttggaa 24529582  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   | |||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  24529581 ttctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 24529527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 19660491 - 19660572
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | | |||||||||| |||||||||    
T  19660491 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaa 19660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 9078402 - 9078338
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    |||||||||||||||| | | ||||||||||||| ||| | | ||||||||||||||||||||||    
T  9078402 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaa 9078338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 25744074 - 25744036
Alignment:
Q  163 tgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  25744074 tgaactcgccatggcgagtagaggctctcgcctcgcgag 25744036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 9078308 - 9078259
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  9078308 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 9078259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 21292736 - 21292785
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  21292736 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 21292785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 22075374 - 22075325
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  22075374 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 22075325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 22119847 - 22119928
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||| ||||||| ||||| | ||| ||||||||||||||||||    
T  22119847 agttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 22119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 20469654 - 20469702
Alignment:
Q  162 ctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagt 210  Q
    ||||||||||||| ||||||||||   ||||||||||||||||| ||||    
T  20469654 ctgaactcgccatagcgagtagagtggatcgcctcgcgagttactcagt 20469702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 34 - 250
Target Start/End: Original strand, 7695 - 7912
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    |||||||||  |||||||||| |||||||| ||||||||||| |||||| | ||||||||||||||| |||||| ||||| ||||||||||||| |||||    
T  7695 gtagttttgatccttaagttgaaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaata 7794  T
Q  133 gtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtta 232  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||  |||||||||||||||||  ||| |||||| | ||| |||||||    
T  7795 gtttaagaatgaatttttgggggttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccttgttccagaatgccttgctaggtta 7894  T
Q  233 aatgcgatacttgtcgca 250  Q
    ||||||||  ||||||||    
T  7895 aatgcgatctttgtcgca 7912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 251
Target Start/End: Complemental strand, 7092 - 6877
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| |||||||||||||| ||| | | |||| |||||||| ||||||| |||| | |||||||||||||||||||||    
T  7092 ttttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagttt 6993  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 235  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| || || ||||||| ||||| | ||| |||||||||||    
T  6992 aagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaat 6893  T
Q  236 gcgatacttgtcgcac 251  Q
    |||||  |||||||||    
T  6892 gcgatctttgtcgcac 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 251
Target Start/End: Complemental strand, 14472 - 14257
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| |||||||||||||| ||| | | |||| |||||||| ||||||| |||| | |||||||||||||||||||||    
T  14472 ttttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagttt 14373  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 235  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| || || ||||||| ||||| | ||| |||||||||||    
T  14372 aagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaat 14273  T
Q  236 gcgatacttgtcgcac 251  Q
    |||||  |||||||||    
T  14272 gcgatctttgtcgcac 14257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 2050839 - 2051018
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||| ||| | ||||||||||||||| |||||||||||| ||||||||||||  |||||    
T  2050839 gtagttttgacccttaagttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc--gaata 2050936  T
Q  133 gtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttaca 214  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||| ||||| ||||||||||    
T  2050937 gtttaagaatggatttttgggagttacacctgaactctccatagcgagtagaggctctcgcctcgtgagttgcccagttaca 2051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 52523345 - 52523550
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 109  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||||   ||||| | |||||||||||||||| | ||||||||| ||||| |||||||||    
T  52523345 cagagagtcaacatgatttcgtagt---tttggtccttaagttggtatttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattct 52523441  T
Q  110 agaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    ||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||| |||||    
T  52523442 agtttgatattgaacctggaacagtttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggccctcgcctgacgagttgcccag 52523541  T
Q  210 ttacagaat 218  Q
    |||||||||    
T  52523542 ttacagaat 52523550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 46 - 236
Target Start/End: Complemental strand, 324706 - 324515
Alignment:
Q  46 cttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg 143  Q
    ||||||||| || ||||| | ||||||||||||||| ||||||  ||||||||||| ||||||| ||||||||||||||||   ||||||||||||||||    
T  324706 cttaagttgaactttagatgattttgagtgcctgaa-tatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatg 324608  T
Q  144 gatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
     ||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||  | |||||||||||||||    
T  324607 aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccaagttacagaacaccttgttaggttaaatg 324515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 14234969 - 14234770
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| ||||||||  ||||||||||||||||| | | |||| |||||||| ||||||| |||| |||||||||||| | |||||||     
T  14234969 ttttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacccgaaatagtt- 14234871  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 235  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || || ||||||||||||| | ||| |||||||||||    
T  14234870 aagaatgaatttttgggagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttacagaatgccttgtttaggttaaat 14234771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 15471391 - 15471189
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| |||||||||| ||||||| | | |||| |||||||| |||||||  ||| | |||||||||||||||||||||||||| | ||||    
T  15471391 agttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctggaatagtttaagaacgaattt 15471292  T
Q  149 ttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtc 247  Q
    | | |||||||||||||||||||||||||||||||||||| |||||||| ||  | |||||||||||||| ||||| ||||||||||||||||  |||||    
T  15471291 t-gagagttacacctgaactcgccatggcgagtagaggccctcgcctcgtgaactgcccagttacagaatgctttgtttaggttaaatgcgatctttgtc 15471193  T
Q  248 gcac 251  Q
    ||||    
T  15471192 gcac 15471189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 34 - 234
Target Start/End: Original strand, 1465047 - 1465249
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| || |||||| | |||||||| ||||||||||||||||||| ||||  || |||||||  ||||||| |||| ||||||||||||||||||    
T  1465047 gtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaact-tgtatgatgatgattatgaaagattgtagattgagattgaacctggaat 1465145  T
Q  132 agtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggt 230  Q
    | |||||||| | |||| || ||||| |||||||||| ||||||||||||||||||  |||||||||||| || ||||||||||||| | ||| ||||||    
T  1465146 aatttaagaacgaatttgtgtgagttgcacctgaacttgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggt 1465245  T
Q  231 taaa 234  Q
    ||||    
T  1465246 taaa 1465249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 17247947 - 17248109
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||   ||| |||||| |  |||||||     
T  17247947 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaa 17248046  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |   ||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||    
T  17248047 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaat 17248109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 42386894 - 42386710
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| || |||||||| |||||||  |||| ||||||| ||||| |||  |||||||||||||  |||| | |||| || ||||||||||| |||    
T  42386894 gtagttttgacctttaagttgaaccttagttgtttatgagtgcatgaac-atgcataataatgattaggcaagactttagactgtgattgaacctgaaat 42386796  T
Q  132 agtttaagaatggat-ttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
    |||| ||||||| |  |||||||||||| ||||||||||||||||||||||||||||  || ||||||||||| |||| ||||||||    
T  42386795 agtt-aagaatgaaacttttgggagttatacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaa 42386710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 53070360 - 53070520
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga-tttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||| || || ||||||| | ||||||| |    
T  53070360 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttggaa 53070458  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
    | |  ||||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  53070459 gctg-acctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 53070520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 12933971 - 12934167
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||||| | ||||| ||     
T  12933971 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaattttgtgaa 12934070  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
     |  ||||||||||||||||||||| |||| |  |||||||||||||      |||||||| ||| ||| ||||||||||||||||  |||||||||    
T  12934071 ctgaacctgaactcgccatggcgagcagagactctcgcctcgcgagtacttgtgttacagacttccttgtttaggttaaatgcgatctttgtcgcac 12934167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 16097782 - 16097594
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacct 163  Q
    ||||||||||| |||||| | | ||||||| ||||| |||||||  |||||||||||||||||| ||   ||| |||||| ||||||| || ||  ||||    
T  16097782 gtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattttagaatgaatttttgtgaattggacct 16097683  T
Q  164 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||||||| ||||||||||  |||||||||||| || | ||||||| ||| ||||  ||| ||||||||||||  |||||||||    
T  16097682 gaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacaaaatgtcttgtttatgttaaatgcgatctttgtcgcac 16097594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 202
Target Start/End: Complemental strand, 32308128 - 32307983
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct-ggaatagtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| ||| ||||||||||||| |||||||  ||||||||||||||||| |||| | ||| ||||| || ||||||||    
T  32308128 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagacttt-agaat-gaattttggga 32308031  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
      |  ||||||||||||||||||||| ||||||  |||||||||||||    
T  32308030 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 605941 - 606049
Alignment:
Q  46 cttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgg 144  Q
    ||||||||| |||||||| | |||||||||||||||  | | |||||||||||||  ||  ||||||| ||||||||||||||||| ||||||| |||||    
T  605941 cttaagttgaaccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaaaagtttaaaaatgg 606040  T
Q  145 atttttggg 153  Q
    |||||||||    
T  606041 atttttggg 606049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 40213392 - 40213535
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctga 165  Q
    |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  |||||| | |||||||| |   ||||||    
T  40213392 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgggaatctaacctga 40213491  T
Q  166 actcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||| |||||| ||||||  ||||||||||||| ||||||    
T  40213492 actcgccacggcgagcagaggctctcgcctcgcgagtgacccag 40213535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 37250932 - 37251005
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaa 234  Q
    |||||||||||||| ||||||||||||  |||||||||||||| |||||||||||||  | |||||||||||||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaacaccttgttaggttaaa 37251005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 12171869 - 12171961
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||| ||||||||||||||||||  |||||||||||  || | ||||||||||| | ||| |||||||||||||||| ||||||||||    
T  12171869 acctgaactggccatggcgagtagaggctctcgcctcgcgatctaactagttacagaatgccttgtttaggttaaatgcgattcttgtcgcac 12171961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 49667754 - 49667890
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctga 165  Q
    ||||||| |||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||||| | | ||| ||  |  ||||||    
T  49667754 ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaatattgtgaactgaacctga 49667853  T
Q  166 actcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    ||||||||||||||| ||||||  |||||||||||||    
T  49667854 actcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 9513370 - 9513228
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||| ||   ||| ||||||  ||||||| ||    
T  9513370 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtga 9513271  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcg 197  Q
      || |||||||||| |||||||||| ||||||  ||||||||    
T  9513270 actaaacctgaactcaccatggcgagcagaggctctcgcctcg 9513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 9521345 - 9521203
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||| ||   ||| ||||||  ||||||| ||    
T  9521345 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtga 9521246  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcg 197  Q
      || |||||||||| |||||||||| ||||||  ||||||||    
T  9521245 actaaacctgaactcaccatggcgagcagaggctctcgcctcg 9521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 14573037 - 14572873
Alignment:
Q  68 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatt-tttgggagttacacctga 165  Q
    ||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||||| ||  | |||||| |   ||||| | |   ||||||    
T  14573037 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa-agacttagaatgaaacctttggaaatctgacctga 14572939  T
Q  166 actcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtt 231  Q
    ||||||||||||||||||||||  ||||||||||||| ||| ||  ||||| | | ||||||||||    
T  14572938 actcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtt 14572873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 23275213 - 23275106
Alignment:
Q  45 ccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaat 142  Q
    |||||||||| |||||||| | ||||||||||||||| ||||||  |||||||||||  ||| || |||| ||||||||||| ||| | ||||||| |||    
T  23275213 ccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaat 23275115  T
Q  143 ggatttttg 151  Q
    |||||||||    
T  23275114 ggatttttg 23275106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 23412814 - 23412929
Alignment:
Q  37 gttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaatagt 134  Q
    |||||| ||||||||||| |||||||| | ||||||||||||||| ||||  ||| |||||||||  ||| || |||| |||||||| |||||| | |||    
T  23412814 gttttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataaaaatgattaggcaagtttttagattgagattggacctgggaaagt 23412912  T
Q  135 ttaagaatggatttttg 151  Q
    |||| ||||||||||||    
T  23412913 ttaaaaatggatttttg 23412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 25476046 - 25476199
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||| ||||||| | | ||||||||||||  ||||| | ||||||||||| ||||||||||   ||| |||||| |  ||| |||     
T  25476046 ccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaaagattttagaatgaaacttttggaa 25476145  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |   |||||||||||||| | |||||||||||  ||||||||||||| ||||||    
T  25476146 tctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccag 25476199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 43927652 - 43927543
Alignment:
Q  45 ccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg 143  Q
    |||||||| | || ||||| | |||||||||||||||| | | |||||||||||||| ||| || |||| |||| |||||||||| | ||||||| ||||    
T  43927652 ccttaagtcgaactttagatgattttgagtgcctgaacatgtataataatgattagacaagtttttagattgagtttgaacctgggaaagtttaaaaatg 43927553  T
Q  144 gatttttggg 153  Q
    ||||||||||    
T  43927552 gatttttggg 43927543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 49389305 - 49389378
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 129  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||||||||||||||||||||    
T  49389305 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctgga 49389378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 202
Target Start/End: Original strand, 1644352 - 1644489
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg-gaatagtttaagaatggatttttgggagttacacc 162  Q
    |||||||||||||||||| | | | ||||||||||| |||||||  |||||||||||||||||| ||| | ||| ||||| || ||||| ||  |  |||    
T  1644352 gtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagacttt-agaat-gaattttgtgaactgaacc 1644449  T
Q  163 tgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    |||||||||||||||||| ||||||  |||||||||||||    
T  1644450 tgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 14501677 - 14501564
Alignment:
Q  39 tttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    |||| ||||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||  ||| || |||| |||||||| |||||| |  ||||    
T  14501677 tttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggcaaggttttagattgagattggacctgggaaggttt 14501579  T
Q  137 aagaatggatttttg 151  Q
    || ||||||||||||    
T  14501578 aaaaatggatttttg 14501564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 201
Target Start/End: Original strand, 11424424 - 11424569
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||| | | |||||||||||||||||||||| || || ||||||  | |||| | |    
T  11424424 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaa-agatttagaatgaaactttttgaa 11424522  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
     |   |||||||||||||| |||||||||||||  ||||||||||||    
T  11424523 ctctgacctgaactcgccacggcgagtagaggctctcgcctcgcgag 11424569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 14179789 - 14179708
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||| |||||    
T  14179789 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaa 14179708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 12378457 - 12378359
Alignment:
Q  56 accttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||||||| | ||||||||||||||| ||||||  |||||||||||  | | || |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  12378457 accttagatgattttgagtgcctgaa-tatgtacaataatgattaggcatgtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 12378359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 45797721 - 45797608
Alignment:
Q  39 tttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    |||| ||||||||||| || ||||| | ||||||||||||||| ||||||  |||||||||||  ||| || |||| |||||||| |||||| |  ||||    
T  45797721 tttgtcccttaagttgaactttagatgattttgagtgcctgaa-tatgtataataatgattaggtaagtttttagattgagattggacctgggaaggttt 45797623  T
Q  137 aagaatggatttttg 151  Q
    || ||||||||||||    
T  45797622 aaaaatggatttttg 45797608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 18438994 - 18438920
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | || |||||||||||||||||||    
T  18438994 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaa 18438920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 20698101 - 20698183
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | ||||||||| |||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  20698101 agttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 26687347 - 26687193
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||| ||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  ||||||  | || |||||    
T  26687347 ccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 26687248  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  26687247 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 26687193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 14973314 - 14973161
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||| |||| | ||   ||| |||| | | |||||| |     
T  14973314 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaaccagaaaagattttagaaagaacttttggaat 14973215  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |   |||||||||||||| |||||| ||||||  ||||||||| ||| ||||||    
T  14973214 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccag 14973161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 37250804 - 37250869
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgg 152  Q
    |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| |||||||||||||    
T  37250804 taataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 37250869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 16104240 - 16104168
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg 128  Q
    ||||||| |||| ||||||||||||| | | ||||||||||||| |||||||  |||||||| ||||||||||    
T  16104240 ccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgg 16104168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 14576505 - 14576568
Alignment:
Q  68 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||||||||||| | | |||| |||||||||||||| | |||||||| |||||||||||||    
T  14576505 tttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaa 14576568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 17488306 - 17488243
Alignment:
Q  68 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  17488306 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 17488243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 17499788 - 17499725
Alignment:
Q  68 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  17499788 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 17499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 22109926 - 22110033
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||||| || ||||| |||||||||||||||||| | | |||||||||||||  ||| || |||  ||||||||||||||  |  |||| | ||||||    
T  22109926 ttaagttgaactttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgtgagtgtttgaaaatgga 22110025  T
Q  146 tttttggg 153  Q
    ||||||||    
T  22110026 tttttggg 22110033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 606135 - 606173
Alignment:
Q  163 tgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  606135 tgaactcgccatggcgagtagaggtcctcgcctcgcgag 606173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 12340219 - 12340138
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||| ||||||| ||||| | ||| ||||||||||||||||||    
T  12340219 agttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 12340138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 13210096 - 13210133
Alignment:
Q  164 gaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  13210096 gaactcgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 20698202 - 20698251
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  20698202 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 20698251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 13442724 - 13442660
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    |||||||||||||||| | | ||||||||||||| ||| | | ||| ||||||||||||||||||    
T  13442724 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 13442660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 22110116 - 22110156
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||| ||||||||||||  ||||||||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 22110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 23083132 - 23083176
Alignment:
Q  165 aactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||||||||||||  ||||||||||| | ||||||    
T  23083132 aactcgccatggcgagtagaggctctcgcctcgcgaatgacccag 23083176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 34 - 250
Target Start/End: Complemental strand, 15099833 - 15099615
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| || |||||| | |||||||| ||||||||||||||||||| ||||  || |||||||| ||||||| |||| ||||||||||||||||||    
T  15099833 gtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaact-tgtatgatgatgattaggaaagattgtagattgagattgaacctggaat 15099735  T
Q  132 agtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggt 230  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||  |||||||||||| || ||||||||||||| ||||  ||||||    
T  15099734 agtttaagaatgaatttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgtcttgtttaggt 15099635  T
Q  231 taaatgcgatacttgtcgca 250  Q
    |||| |||||  ||||||||    
T  15099634 taaaagcgatctttgtcgca 15099615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 39705930 - 39706144
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| | |||||||||||||||||||||    
T  39705930 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctggaatagttt 39706029  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 235  Q
    ||||| | ||||| | |||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||| ||||| |||||||||||    
T  39706030 aagaacgaatttt-gagagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaat 39706128  T
Q  236 gcgatacttgtcgcac 251  Q
    |||||  |||||||||    
T  39706129 gcgatctttgtcgcac 39706144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 47 - 251
Target Start/End: Complemental strand, 15190787 - 15190581
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||| | |||||||| |||||||||||||||||| | | |||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  15190787 ttaagtcgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctggaatagtttaagaatgga 15190688  T
Q  146 tttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatactt 244  Q
    |||||||| |||||| ||| ||||||||||||||||||||||  |||||||||||| || ||||||||||||| | ||| |||||||||| |||||  ||    
T  15190687 tttttgggcgttacatctgtactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatcttt 15190588  T
Q  245 gtcgcac 251  Q
    |||||||    
T  15190587 gtcgcac 15190581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 52242811 - 52243016
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 109  Q
    ||||||||| ||||| |||||||||   ||||  | |||||||||   ||||| | ||| |||||||||||| | | |||||||||| || |||||||||    
T  52242811 cagagagtcaacatgatttcgtagt---tttgatctttaagttggtatttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattct 52242907  T
Q  110 agaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||    
T  52242908 agaatgagattgaacctggaatagtttaagaatgcattgttgggagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccag 52243007  T
Q  210 ttacagaat 218  Q
    |||||||||    
T  52243008 ttacagaat 52243016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 34 - 218
Target Start/End: Original strand, 15464567 - 15464752
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| |||||||||||    ||||| | ||||||||||||||| ||||||  ||||||||||| ||||||| |||| |||||||||||||| |||    
T  15464567 gtagttttgacccttaagttgatatttagatgattttgagtgcctgaa-tatgtataataatgattaggaaagattttagattgagattgaacctgaaat 15464665  T
Q  132 agtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||  |||||||||||||| ||||||||||||||    
T  15464666 agtttaagaatggatttttgggtgttacacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaat 15464752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 34 - 187
Target Start/End: Original strand, 43198226 - 43198380
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||||||| | ||||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  43198226 gtagttttgacccttaagttaaaccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatggaata 43198325  T
Q  133 gtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggc 187  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  43198326 gtttaagaattgatttttgggagttacacctgaactcaccatagcgagtagaggc 43198380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 13845009 - 13844854
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||||| |||||||| ||||||||||| |||||| | | |||| |||||||||||||||||||||   ||||| ||||||||||||||||||||||||    
T  13845009 ttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaagattctagatcaagatttaacctggaatagtttaagaatgga 13844910  T
Q  146 tttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    ||||||||||||||||||| ||| ||||||||||||||||||  ||||||||||||    
T  13844909 tttttgggagttacacctgtacttgccatggcgagtagaggctctcgcctcgcgag 13844854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 251
Target Start/End: Complemental strand, 8846834 - 8846638
Alignment:
Q  58 cttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgg-gag 155  Q
    |||||| |||||||||| ||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||||| |||||| | |||    
T  8846834 cttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttttgtgag 8846735  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcac 251  Q
    || ||||| |||||||||||||||||||||||  |||||||||||| || | ||||||||||| ||||  ||| ||||||||||||  |||||||||    
T  8846734 ttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttatgttaaatgcgatctttgtcgcac 8846638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 44928592 - 44928746
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacct 163  Q
    |||||||||||||||||| ||| ||||||||||||| ||||| | ||||||||||||||||||||||   ||| |||||| |  ||||||| |   |||     
T  44928592 gtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctgacca 44928691  T
Q  164 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    ||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||    
T  44928692 gaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaat 44928746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 15868273 - 15868391
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| ||||||||||| |||||||| | ||||||||||||||| ||||||  ||||||||||| |||| || |||| ||||||||||||||| |     
T  15868273 gtagttttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggaaagtttttagattgagattgaacctgggaa 15868371  T
Q  132 agtttaagaatggatttttg 151  Q
    ||||||| ||| ||||||||    
T  15868372 agtttaaaaatagatttttg 15868391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 12774458 - 12774263
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga-atagtttaagaatggatttttggga 154  Q
    ||||||| |||||||||||||||||| | | |||||||||||||||||||||  |||||||||||||||||||| | |  || ||||| || ||||| ||    
T  12774458 ccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgtt-agaat-gaattttgtga 12774361  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
      |  ||||||||||||||||||||| ||||||  |||||||||||||      |||||||| | | ||| |||||||||||||||| ||||||||||    
T  12774360 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagactgccttgtttaggttaaatgcgatccttgtcgcac 12774263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 21814964 - 21815124
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga-tttttggga 154  Q
    ||||||| | ||||||||| |||||| | | ||||||||||||| ||||| | |||||||| | |||||||||| || || ||||||| | ||||||| |    
T  21814964 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaatt-aagaatgaactttttggaa 21815062  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
    | |  || |||||||||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  21815063 gctg-acttgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 21815124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 21815293 - 21815453
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga-tttttggga 154  Q
    ||||||| | ||||||||| |||||| | | ||||||||||||| ||| | | |||||||| | |||||||||| || || ||||||| | ||||||| |    
T  21815293 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctggattaatt-aagaatgaactttttggaa 21815391  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
    | |  ||||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  21815392 gctg-acctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 21815453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 21818386 - 21818546
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga-tttttggga 154  Q
    ||||||| | ||||||||| |||||| | | ||||||||||||| ||||| | |||||||| | |||||||||| || || ||||||| | ||||||| |    
T  21818386 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaatt-aagaatgaactttttggaa 21818484  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
    | |  || |||||||||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  21818485 gctg-acttgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 21818546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 32851929 - 32851816
Alignment:
Q  39 tttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    |||| ||||||||||| |||||||| | ||||||||||||||| ||||||  |||||||||||| ||| || |||| |||||||| |||||| |  ||||    
T  32851929 tttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattagacaagtttttagattgagattggacctgggaaggttt 32851831  T
Q  137 aagaatggatttttg 151  Q
    || ||||||||||||    
T  32851830 aaaaatggatttttg 32851816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 13415 - 13532
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| ||||||||||| || ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | |||||    
T  13415 ttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagttt 13514  T
Q  137 -aagaatggatttttggg 153  Q
     || ||||||||||||||    
T  13515 aaaaaatggatttttggg 13532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 16597106 - 16597031
Alignment:
Q  56 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  16597106 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 3097093 - 3097017
Alignment:
Q  56 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    |||||||| ||||| |||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  3097093 accttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 3097017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 15091326 - 15091203
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggat-ttttgggagttacacctgaactcgccatggcgagtagag 185  Q
    ||||| ||||||| ||||| | ||||||||||||||||||||||   ||| |||||| |  |||||| | |   |||||||||||||| |||||| ||||    
T  15091326 taatattgattaggaaagaatgtagaatgagattgaacctggaaggattttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagag 15091227  T
Q  186 gccatcgcctcgcgagttacccag 209  Q
    ||  ||||||||||||| ||||||    
T  15091226 gctctcgcctcgcgagtgacccag 15091203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 12287825 - 12287891
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  12287825 taataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 12287891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 14039109 - 14038955
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||| | ||||| | |||||||||||||||||| |||   ||| ||||||  | |||||| |    
T  14039109 ccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacctagaaagattttagaatgaaacttttggaa 14039010  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   ||| |||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  14039009 atctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 14038955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 44102566 - 44102508
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    ||||||||||||||||||||| ||||||  ||||||||||||| ||| | |||||||||    
T  44102566 acctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaat 44102508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 53081789 - 53081854
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgg 152  Q
    ||||||||||||   ||| || |||| ||||||||||||||||| ||||||| |||||||||||||    
T  53081789 taataatgattaagcaagtttttagattgagattgaacctggaaaagtttaaaaatggatttttgg 53081854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 13616 - 13656
Alignment:
Q  162 ctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  13616 ctgaactcgccatagcgagtagaggccctcgcctcgcgagt 13656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 12903195 - 12903131
Alignment:
Q  68 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  12903195 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 12903131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 14052967 - 14053049
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | ||||||||||||||| |||||  |||||||||||| ||||| | ||| |||||||||||| ||||||    
T  14052967 agttgaaccttagatgcttttgagtgcctgaa-tatgtctaataatgattaggaaagaatgtaggatgagattgaacttggaat 14053049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 7089232 - 7089185
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccc 207  Q
    ||||||||||||||||||||| ||||||  ||||||||||||| ||||    
T  7089232 acctgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccc 7089185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 16239653 - 16239728
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagat-tctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||  | ||||||||||||||||||||||    
T  16239653 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaa 16239728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 17047838 - 17047885
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccc 207  Q
    ||||||||||||||||||||| ||||||  ||||||||||||| ||||    
T  17047838 acctgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccc 17047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 6190893 - 6190819
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| | ||| | ||| ||||||||||||||||||    
T  6190893 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 6190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 7089313 - 7089251
Alignment:
Q  70 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  7089313 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 7089251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 3096998 - 3096949
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  3096998 acctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccag 3096949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 7799052 - 7799003
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  7799052 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 7799003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 12903112 - 12903063
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||||||||||   |||||||||||| ||||||    
T  12903112 acctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccag 12903063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 15552280 - 15552199
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||| | | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||| ||||||||    
T  15552280 agttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 15552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 24029208 - 24029127
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| || ||||||||||||||| | | ||||| ||||||  ||||| | ||| ||||||||||||||||||    
T  24029208 agttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaa 24029127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 50 - 236
Target Start/End: Complemental strand, 13407 - 13220
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| |||||||||||||||||| | | |||| |||||||| |||||||  ||| | |||||||||||||||||||||||||||| ||||    
T  13407 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagtttaagaatgaattt 13308  T
Q  149 ttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    ||| ||||| |||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| | |||||||||||||||    
T  13307 ttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgttaggttaaatg 13220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 47 - 251
Target Start/End: Original strand, 15481 - 15687
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||||| |||||||| |||||||||||||| ||| | | |||| |||||||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  15481 ttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctggaatagtttaagaatgga 15580  T
Q  146 tttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatactt 244  Q
    ||||| ||| |||||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||| | ||| ||| |||||||| |||  ||    
T  15581 tttttcggaattacacatgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgtttatgttaaatgtgatcttt 15680  T
Q  245 gtcgcac 251  Q
    |||||||    
T  15681 gtcgcac 15687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 50 - 201
Target Start/End: Original strand, 43438 - 43590
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| |||||||||||||||||| | | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43438 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggattt 43537  T
Q  149 ttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||||| |||||||||| |||||||||||  ||||||||||||    
T  43538 ttgggagttacacctgtactcgccatgacgagtagaggctctcgcctcgcgag 43590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 50 - 201
Target Start/End: Original strand, 47358 - 47510
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| |||||||||||||||||| | | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47358 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggattt 47457  T
Q  149 ttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||||| ||| |||||| |||||||||||  ||||||||||||    
T  47458 ttgggagttacacctgtactagccatgacgagtagaggctctcgcctcgcgag 47510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 39834315 - 39834107
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| || |||||| | |||||||| |||||||||||||| |||| ||||  ||||||||||| ||||||| |||| ||||||||||||||||||    
T  39834315 gtagttttgacctttaagtcgaaccttagatgtttttgagtgcctaaact-tgtatgataatgattaggaaagattgtagattgagattgaacctggaat 39834217  T
Q  132 agtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggt 230  Q
    |||||||||||| || |||| ||||| |||||||||||||||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||| ||    
T  39834216 agtttaagaatgaatctttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaataccttgtttaagt 39834117  T
Q  231 taaatgcgat 240  Q
    ||||||||||    
T  39834116 taaatgcgat 39834107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 38 - 240
Target Start/End: Complemental strand, 6520847 - 6520644
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| ||||||||||| |||||| | | ||||||| ||||| |||||||  ||| | ||| |||||||| ||||||||    
T  6520847 ttttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacctgaaatagttt 6520748  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||||| |  | |||| ||||||||| |||||||||||||||||    
T  6520747 aagaatggatttttgagagttagacctgaattcgccatggcgagtagaggccctcgcctcgcaaactgcccaattacagaatgctttgttaggttaaatg 6520648  T
Q  237 cgat 240  Q
    ||||    
T  6520647 cgat 6520644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 38854893 - 38855107
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| || |||||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| | ||||| |||||||||||||||    
T  38854893 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctggaatagttt 38854992  T
Q  137 aagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 235  Q
    ||||| | ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| | ||| ||||||||||     
T  38854993 aagaacgaatttt-gagagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgcccagttacagaatgccttgcttaggttaaac 38855091  T
Q  236 gcgatacttgtcgcac 251  Q
     ||||  |||||||||    
T  38855092 acgatctttgtcgcac 38855107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 21285989 - 21285874
Alignment:
Q  125 ctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg 224  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||| |||||    
T  21285989 ctggaatagtttaagaatgaatttttgggagttacacctgaactcgctatggcgagtagaggccctcgcctcgcaagttgcccagttacagaatgctttg 21285890  T
Q  225 ttaggttaaatgcgat 240  Q
    ||||||||||||||||    
T  21285889 ttaggttaaatgcgat 21285874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 21674157 - 21673969
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacct 163  Q
    |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||||| || |||| ||||| |||||    
T  21674157 gtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatatttgtgagttgcacct 21674058  T
Q  164 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||||||||||||||||||| ||||||||||| ||  |  |||||||||| | ||| ||||| ||||||||||  |||||||||    
T  21674057 gaactcgccatggcgagtagaggccctcgcctcgcgaattgacttgttacagaatgccttgtttaggataaatgcgatctttgtcgcac 21673969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 65 - 251
Target Start/End: Original strand, 23760509 - 23760696
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacct 163  Q
    |||||||||| ||||||| | | ||||||||||||| ||| |||  | | |||||||||||||||||||||||||||| | | || ||||||||| ||||    
T  23760509 gtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctggaatagtttaagaacgaacttgtgggagttatacct 23760608  T
Q  164 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
    ||||| |||| |||||||||||||| ||||||||||| ||  | ||||||| ||| | |||||||| ||||||||||  |||||||||    
T  23760609 gaacttgccaaggcgagtagaggccctcgcctcgcgaattgactagttacaaaatgccttgttaggataaatgcgatctttgtcgcac 23760696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 19801101 - 19801234
Alignment:
Q  70 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaact 168  Q
    ||||||||||||| | | ||||||||||||| ||||| |  ||||| |||||||||||||||||||||||||| | | || ||||||||| |||||||||    
T  19801101 tgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctggaatagtttaagaacgaacttgtgggagttatacctgaact 19801200  T
Q  169 cgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    |||||||||||||||||| | |||||||||||||    
T  19801201 cgccatggcgagtagaggtcctcgcctcgcgagt 19801234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 218
Target Start/End: Complemental strand, 41598644 - 41598482
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | |||||||||||||||| | | ||||||||||||  ||||| | ||||||||||||||||||||||   ||| |||||| |  |||||||     
T  41598644 ccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaa 41598545  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |   ||||||||||||||||||||| ||||||  ||||||||||||| ||| |||||||||||    
T  41598544 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagttacagaat 41598482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 65 - 251
Target Start/End: Original strand, 26355367 - 26355555
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacct 163  Q
    |||||||||||||||||| | | ||||||||||||| | |||||  ||| |||||||||||||||||    || |||||| ||||||| || ||  ||||    
T  26355367 gtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactttagaatgaatttttgtgaattgtacct 26355466  T
Q  164 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    ||||| ||||||||||||||||||  ||||||| |||| || | ||||||||||| | ||| ||| ||||||||||||  |||||||||    
T  26355467 gaacttgccatggcgagtagaggctctcgcctcacgagctaactagttacagaatgccttgtttatgttaaatgcgatctttgtcgcac 26355555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 13507657 - 13507765
Alignment:
Q  44 cccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaa 141  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||  |||||||||||| ||| || |||| ||||| ||||||||| | ||||||| ||    
T  13507657 cccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaaaaa 13507755  T
Q  142 tggatttttg 151  Q
    ||||||||||    
T  13507756 tggatttttg 13507765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 13597189 - 13597297
Alignment:
Q  44 cccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaa 141  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||  |||||||||||| ||| || |||| ||||| ||||||||| | ||||||| ||    
T  13597189 cccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaaaaa 13597287  T
Q  142 tggatttttg 151  Q
    ||||||||||    
T  13597288 tggatttttg 13597297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 152
Target Start/End: Complemental strand, 20499143 - 20499024
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| ||||| ||||| || ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||  | |    
T  20499143 gtagttttgacccttgagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctgagaaa 20499044  T
Q  133 gtttaagaatggatttttgg 152  Q
    |||||| |||||||||||||    
T  20499043 gtttaaaaatggatttttgg 20499024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 22875494 - 22875372
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagagg 186  Q
    ||||||||||||| ||||||| ||||| ||| ||||||||||||   ||| |||||| |  ||||||| |   |||||||||||||||| |||| |||||    
T  22875494 taataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatgacgagcagagg 22875395  T
Q  187 ccatcgcctcgcgagttacccag 209  Q
    |  ||||||||||||| ||||||    
T  22875394 ctctcgcctcgcgagtgacccag 22875372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 20536675 - 20536514
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| | |||||||||||||||| | | | ||||||||||| ||||| | ||| ||||||||||||||||||   ||  |||||| |  |    
T  20536675 agttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaact 20536576  T
Q  149 t-tgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    | ||||| |   |||||||||||||| |||||||||||||  ||||||||||||| ||||||    
T  20536575 tatgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccag 20536514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 21491462 - 21491382
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 126  Q
    |||||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||    
T  21491462 ttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 21491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 231
Target Start/End: Complemental strand, 23406841 - 23406665
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttt-tggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||| ||||||||   ||  |||||| |  || |||||    
T  23406841 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattgtagaatgaaacttgtggga 23406742  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtt 231  Q
     |   |||||||||||||| |||||||||||||  ||||||||||||| ||||||  ||||| | | ||||||||||    
T  23406741 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggtt 23406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 5865931 - 5866009
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 127  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  5865931 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 5866009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 6759717 - 6759563
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||| ||||| | | ||||||||||||| ||||| | |||||||||||||||| |||||   ||| ||||||  | |||||| |    
T  6759717 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaatattttagaatgaaacttttggaa 6759618  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  6759617 atctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 6759563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 17141380 - 17141302
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 127  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  17141380 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 17141302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 45130691 - 45130767
Alignment:
Q  56 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  45130691 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 45130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 17266565 - 17266674
Alignment:
Q  45 ccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaat 142  Q
    |||||||| | || ||||| ||||||||||||||||| ||||||  |||||||||||  ||| || |||| |||||||||||||   | ||||||| |||    
T  17266565 ccttaagtcgaactttagatgtttttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacctacgaaagtttaaaaat 17266663  T
Q  143 ggatttttggg 153  Q
    |||||||||||    
T  17266664 ggatttttggg 17266674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 18878898 - 18878972
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  18878898 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 18878972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 982975 - 983084
Alignment:
Q  45 ccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg 143  Q
    |||||||||| || ||||| | ||||||||| |||||| | | || || ||||||| |||| || |||| ||||||||||||||  | ||||||| ||||    
T  982975 ccttaagttgaactttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctgagaaagtttaaaaatg 983074  T
Q  144 gatttttggg 153  Q
    ||||||||||    
T  983075 gatttttggg 983084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 17439100 - 17439187
Alignment:
Q  67 ttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||||| ||||||  |||||||||||  ||| || |||| || |||||||||||| | ||||||| ||||||||||||||    
T  17439100 ttttgagtgcctgaa-tatgtacaataatgattaggcaagtttttagattgggattgaacctgggaaagtttaaaaatggatttttggg 17439187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 21286724 - 21286656
Alignment:
Q  11 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac 82  Q
    ||||||||| ||||| |||||||||   |||| ||||||||||| |||||||| |||||| |||||||||||    
T  21286724 cagagagtcaacatgatttcgtagt---tttgacccttaagttgaaccttagatgtttttaagtgcctgaac 21286656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 21918664 - 21918745
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| | ||| |||||||||||| | | ||||||||||||||||||| | ||| | ||||||||||||||||    
T  21918664 agttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaa 21918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 24353550 - 24353463
Alignment:
Q  67 ttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||||| ||||||  |||||||||||  ||| || |||| ||||||||||||||| | ||||||  ||||||||||||||    
T  24353550 ttttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttataaatggatttttggg 24353463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 217
Target Start/End: Original strand, 21414887 - 21415049
Alignment:
Q  56 accttagaggtttttgagtgcctgaactatgtaa--taatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||||||| |||||||||||||||||  ||| |   |||||||||| ||||||| ||||||||||||||||  ||| ||| || | |||||| |  || |    
T  21414887 accttagatgtttttgagtgcctgaag-atgcacactaatgattaggaaagattgtagaatgagattgaactcggattagcttcaaaatggaatggtgag 21414985  T
Q  154 agttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
      ||  |||  ||||||||||||||||||||| |  ||||||||||||||  ||| ||||||||    
T  21414986 tattttaccctaactcgccatggcgagtagagcctctcgcctcgcgagttgtccaattacagaa 21415049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 7373209 - 7373135
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||| |||||||||||||    
T  7373209 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaa 7373135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 18818071 - 18818145
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||| | | ||| ||||||||||||||||||    
T  18818071 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 18818145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 21918766 - 21918808
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    ||||||||||||||||||||| ||||||  |||||||||||||    
T  21918766 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21918808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 22627195 - 22627125
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 126  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||    
T  22627195 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22627125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 31971711 - 31971629
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | ||||| |||||||||| | | ||||||||||||| ||||  | ||| |||||||||||||||||||    
T  31971711 agttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctggaat 31971629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 18818175 - 18818224
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  18818175 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 18818224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 21255686 - 21255605
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| | |||||||||||  ||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  21255686 agttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 21255605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 37116874 - 37116787
Alignment:
Q  67 ttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||||| ||||||  |||||||||||  ||| || |||| ||||||||||||||  | ||| ||| ||||||||||||||    
T  37116874 ttttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtataaaaatggatttttggg 37116787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 25362843 - 25362887
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  25362843 taataatgattaggaaagaatgtaggatgagattgaacctggaat 25362887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 37116704 - 37116664
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||| ||||||||||||  ||||||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 37116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 34 - 218
Target Start/End: Original strand, 23708257 - 23708441
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| ||||| |||||  | ||||| ||||||||||| |||||| |||||| |||||||||| |||| |  |||| |||||||||| | ||||||    
T  23708257 gtagttttgacccttgagttgatctttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatc-ggaata 23708355  T
Q  133 gtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||    
T  23708356 gtttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaat 23708441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 50 - 218
Target Start/End: Complemental strand, 25176309 - 25176140
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| |||||||||||||||||| | | |||| |||||||| |||| ||  ||| ||||||||||||||||||||||||||||  |||||    
T  25176309 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctggaatagtttaagaacagattt 25176210  T
Q  149 ttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    ||| |||||| ||||||||||||||||||||||||||||| |||||||||||  | | ||||||||||||    
T  25176209 ttgagagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcgcagttacagaat 25176140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 231
Target Start/End: Complemental strand, 23076910 - 23076726
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    ||||||||  ||||||| | |||||||||||||||| | | ||||||| ||||| ||||| | ||| ||||||||| |||||||| || || |||||| |    
T  23076910 ttaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaa-agatttagaatgaa 23076812  T
Q  146 tttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtt 231  Q
      ||||| | |   |||||||||||||| |||||||||||||  ||||||||||||||||||||  ||||| | | ||||||||||    
T  23076811 actttggaattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttaggtt 23076726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 231
Target Start/End: Complemental strand, 23660482 - 23660307
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||   ||| |||||| |  ||| |||     
T  23660482 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttttggaa 23660383  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtt 231  Q
    |   |||||||||||||| |||||| ||||||  |||||||| |||| ||||||  ||||| | | ||||||||||    
T  23660382 tctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgttaggtt 23660307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 298476 - 298629
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||| || || ||||||  | || |||||    
T  298476 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaa-agatttagaatgaaacttgtggga 298574  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| |||||||||||||  ||||||||||||| ||||||    
T  298575 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccag 298629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 23207634 - 23207559
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    |||||||||||||| ||||||||||||  |||||| ||||||| |||||||||||||  | |||||||||||||||    
T  23207634 cctgaactcgccatagcgagtagaggctctcgccttgcgagttgcccagttacagaacaccttgttaggttaaatg 23207559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 251
Target Start/End: Complemental strand, 28406429 - 28406243
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctga 165  Q
    |||||||||||||||| | | ||||||| ||||| |||||||  |||||||||||||||||| ||   ||| |||||  | ||||| ||  |  ||||||    
T  28406429 ttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaactgaacctga 28406330  T
Q  166 actcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||||||||||||||||  ||||||||| |||      |||||| ||| | ||| |||||||||||||||| ||||||||||    
T  28406329 actcgccatggcgagtagaggctctcgcctcgcaagtacttgtgttacataatgccttgtttaggttaaatgcgatccttgtcgcac 28406243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 23071617 - 23071695
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 127  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  23071617 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 23071695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 18786446 - 18786566
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| ||||||||||| || ||||| | ||||||||||||||||   | || || |||||||  ||| || |||| ||||||||||||||  | |    
T  18786446 gtagttttgacccttaagttgaactttagatgattttgagtgcctgaacacgtatattattgattaggcaagtttttagattgagattgaacctgagaaa 18786545  T
Q  133 gtttaagaatggatttttggg 153  Q
    |||||| ||||||||||||||    
T  18786546 gtttaaaaatggatttttggg 18786566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 22337544 - 22337422
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttac-acctgaactcgccatggcgagtagag 185  Q
    ||||||||||||| ||||| | ||| |||||||||||||||||| || || |||||| |  |||  |||||   ||||||| |||||| |||||||||||    
T  22337544 taataatgattaggaaagaatgtaggatgagattgaacctggaa-agatttagaatgaaactttttgagttctgacctgaattcgccacggcgagtagag 22337446  T
Q  186 gccatcgcctcgcgagttacccag 209  Q
    ||  ||||||||||||| ||||||    
T  22337445 gctctcgcctcgcgagtgacccag 22337422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 22133878 - 22133948
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 126  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||    
T  22133878 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 22133948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 22412733 - 22412817
Alignment:
Q  70 tgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||| |||||  |||||||||||  ||| || |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  22412733 tgagtgcctgaac-atgtatgataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 22412817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 22730894 - 22730968
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  22730894 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22730968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 22737841 - 22737911
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 126  Q
    ||||||| | |||||||||||||||| ||| ||||||||||||| ||||| | ||| ||||||||||||||    
T  22737841 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacct 22737911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 23654064 - 23654146
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||| ||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  23654064 agttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 23654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 22412900 - 22412953
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttaca 214  Q
    |||||||||||||| ||||||||||||  |||||||| ||||| ||||||||||    
T  22412900 cctgaactcgccatagcgagtagaggctctcgcctcgtgagttgcccagttaca 22412953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 23207801 - 23207717
Alignment:
Q  70 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||| | | ||||||| ||||||||||||||    
T  23207801 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttggg 23207717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 23286317 - 23286235
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | ||||||||| |||||| | | ||||||||||||| ||||| | ||| |||||||||||| ||||||    
T  23286317 agttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatggaat 23286235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 27754035 - 27753961
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||| ||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  27754035 ccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 27753961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 32451590 - 32451744
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttt-tggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| | ||| | ||| |||||||||||| |||||   ||  |||||| |  || |||||    
T  32451590 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattgtagaatgaaacttgtggga 32451689  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  32451690 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 32451744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 37787 - 37863
Alignment:
Q  56 accttagaggtttttgagtgcctgaac-tatgtaataatgatta-gaaaagattctagaatgagattgaacctggaat 131  Q
    |||||||| | |||||||||||||||| | | |||||||||||| ||||||| | ||| |||||||||||||||||||    
T  37787 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaga-tgtaggatgagattgaacctggaat 37863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 20519957 - 20520014
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |||||| ||||||| ||| ||||||||  |||||||||||||| || |||||||||||    
T  20519957 cctgaagtcgccatagcgtgtagaggctctcgcctcgcgagttgcctagttacagaat 20520014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 20309523 - 20309479
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  20309523 taataatgattaggaaagaatgtaggatgagattgaacctggaat 20309479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 20519790 - 20519874
Alignment:
Q  70 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||| ||| | |||| || ||||||||||||||    
T  20519790 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaaatggatttttggg 20519874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 31756268 - 31756232
Alignment:
Q  165 aactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||||||||||||  ||||||||||||    
T  31756268 aactcgccatggcgagtagaggctctcgcctcgcgag 31756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 97; Significance: 9e-48; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 130359 - 130171
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacct 163  Q
    |||||||||||||||||| | | || | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  130359 gtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggaattacacct 130260  T
Q  164 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
     |||||||||||||||| ||||||  |||||||||||| || | ||||||| ||| | ||| ||||| ||||||||||  |||||||||    
T  130259 aaactcgccatggcgagcagaggctctcgcctcgcgagctaactagttacaaaatgccttgtttaggataaatgcgatctttgtcgcac 130171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 60479 - 60536
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaat 60536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 60312 - 60396
Alignment:
Q  70 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||| ||| | ||||||| ||||||||||||||    
T  60312 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatggatttttggg 60396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 3392 - 3196
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| |||||||||||||||||||||||||||| | | || ||||||    
T  3392 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaacgaacttgtgggag 3293  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    ||| ||||||||||||||||||||||||||||| |||||||| || ||  | ||||||||||| | ||| ||||||||||||||||  |||||||||    
T  3292 ttatacctgaactcgccatggcgagtagaggccctcgcctcgtgaattgactagttacagaatgccttgtttaggttaaatgcgatctttgtcgcac 3196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 34 - 251
Target Start/End: Original strand, 28194086 - 28194305
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| || |||||| | ||||| || ||||||||||||||||||| ||||  || |||||||| ||||||| |||| |||||||||||||| |||    
T  28194086 gtagttttgacctttaagtcgaaccttggatgtttttgagtgcctgaact-tgtatgatgatgattaggaaagattgtagattgagattgaacctgaaat 28194184  T
Q  132 agtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggt 230  Q
    |||||||||||| || |||| ||||| ||||||||||||||||||| |||||||||  |||||||||||| |||||| ||||| ||| ||||  ||||||    
T  28194185 agtttaagaatgaatctttgtgagttgcacctgaactcgccatggcaagtagaggctctcgcctcgcgagctacccatttacaaaatgtcttgtttaggt 28194284  T
Q  231 taaatgcgatacttgtcgcac 251  Q
    || |||||||  |||||||||    
T  28194285 tacatgcgatctttgtcgcac 28194305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 22921521 - 22921724
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattt 148  Q
    ||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| |||||||||||| ||||||||||||||| | ||||    
T  22921521 agttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaaccaggaatagtttaagaacgaattt 22921620  T
Q  149 ttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtc 247  Q
    ||| |||||| || |||||||||||||||||||||||||  |||||||||||  | || ||||||||||| | ||| || |||||||||||||  |||||    
T  22921621 ttgagagttagacttgaactcgccatggcgagtagaggctctcgcctcgcgaactgcctagttacagaatgccttgtttgggttaaatgcgatctttgtc 22921720  T
Q  248 gcac 251  Q
    ||||    
T  22921721 gcac 22921724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 52927642 - 52927837
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||  |||||||  |||||||||||||||||||||   |||  ||||| ||||||   ||    
T  52927642 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattttggaatgaattttttaaag 52927741  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||| | |||||||||||||||||||  |||||||||    
T  52927742 ttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttgttaggttaaatgcgatctttgtcgcac 52927837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 251
Target Start/End: Original strand, 35981325 - 35981543
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| || |||||| | ||||| || ||||||||||||||||||| ||||  || |||||||| ||||||| |||| ||||||||||||||| ||    
T  35981325 gtagttttgacctttaagtcgaacctt-gatgtttttgagtgcctgaact-tgtatgatgatgattaggaaagattgtagattgagattgaacctgggat 35981422  T
Q  132 agtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggt 230  Q
    |||||||||| | |||| || ||||| |||||||||||||||||| ||||||||||  |||||||||||| || | ||||||||||| | ||| ||||||    
T  35981423 agtttaagaacgaatttatgtgagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggt 35981522  T
Q  231 taaatgcgatacttgtcgcac 251  Q
    |||| |||||  |||||||||    
T  35981523 taaaagcgatctttgtcgcac 35981543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 33681469 - 33681284
Alignment:
Q  57 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggga 154  Q
    ||||||| |||||||||| |||||| |||||  |||||||||||| |||||||  |||||||||||||||||||||   ||| |||||| ||||||| ||    
T  33681469 ccttagatgtttttgagttcctgaa-tatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtga 33681371  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgat 240  Q
    ||| |||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||| | | ||| ||| ||||||||||||    
T  33681370 gttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttgcttatgttaaatgcgat 33681284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 20637279 - 20637115
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagagg 186  Q
    |||| |||||||| |||||||  ||| | |||||||||||||||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||||||    
T  20637279 taatgatgattaggaaagattggagattaagattgaacctggaatagtttaagaacgaatttttgtgagttgcacctgaactcgccatggcgagtagagg 20637180  T
Q  187 ccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgca 250  Q
    |  |||||||||||| ||  |||||||||||| ||||  |||||||||| |||||  ||||||||    
T  20637179 ctctcgcctcgcgagctaatcagttacagaatgtcttgtttaggttaaaagcgatctttgtcgca 20637115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 47 - 164
Target Start/End: Complemental strand, 43697830 - 43697712
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||||| |||||||| |||||||||||||||||| | | || | ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  43697830 ttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctggaatagtttaagaatgga 43697731  T
Q  146 tttttgggagttacacctg 164  Q
    |||| ||||||||||||||    
T  43697730 ttttcgggagttacacctg 43697712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 60 - 251
Target Start/End: Complemental strand, 20248734 - 20248541
Alignment:
Q  60 tagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga-atagtttaagaatggatttttgggagtt 157  Q
    |||| |||||||||||||||||| | | ||||||||||||| ||||||   |||||||||||||||||||| | | |||| ||||| ||||||| ||  |    
T  20248734 tagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagacttta-gaatgaatttttgtgaact 20248636  T
Q  158 acacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcac 251  Q
      |||||||||||||||||||||||||||| ||||||||||||| || | |||||||||||  |||  |||||||||||||||| ||||||||||    
T  20248635 gaacctgaactcgccatggcgagtagaggctatcgcctcgcgagctaactagttacagaatgccttatttaggttaaatgcgattcttgtcgcac 20248541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 22238089 - 22237905
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    |||||||  ||||||||||||||||| | | |||||||| |||| |||||||  ||||||||||| |||||||||   |||  |||| || ||||| |||    
T  22238089 ccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattttggaat-gaattttgtgag 22237991  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgat 240  Q
    || ||| |||||||||||||||||||||||||| ||||||||||| ||  | ||||||||||| | ||| ||||||||||||||||    
T  22237990 ttgcacttgaactcgccatggcgagtagaggccctcgcctcgcgaattgactagttacagaatgccttgtttaggttaaatgcgat 22237905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 211
Target Start/End: Complemental strand, 433467 - 433312
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | ||||||||| |||||| | | || |||||||||| ||||| | ||||||||||||||||||||||   ||| |||||| |  |||||||     
T  433467 ccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaa 433368  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagtt 211  Q
    |   ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  433367 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagtt 433312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 21754495 - 21754301
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct-ggaatagtttaagaatggatttttggga 154  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||| |||||||||||| |||| | ||| ||||| || ||||| ||    
T  21754495 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagacttt-agaat-gaattttgtga 21754398  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
      |  ||||||||||||||||||||| ||||||  |||||||||||||       ||||||| | | ||||||||||||||| ||| ||||||||||    
T  21754397 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgttttacagactgccttgttaggttaaatgtgatccttgtcgcac 21754301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 209
Target Start/End: Original strand, 50209885 - 50210027
Alignment:
Q  68 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttgggagttacacctga 165  Q
    ||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||||| || || ||||||  | |||||| | |   ||||||    
T  50209885 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa-agatttagaatgaaacttttggaattctgacctga 50209983  T
Q  166 actcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||| |||||| ||||||  ||||||||||||| ||||||    
T  50209984 actcgccacggcgagcagaggctctcgcctcgcgagtgacccag 50210027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 21861132 - 21861250
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| |||||||||||  | ||||| | || ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | |    
T  21861132 gtagttttgacccttaagttgatctttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaa 21861231  T
Q  133 gtttaagaatggatttttg 151  Q
    |||||| ||||||||||||    
T  21861232 gtttaaaaatggatttttg 21861250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 26065295 - 26065238
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaat 26065238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 34510239 - 34510087
Alignment:
Q  58 cttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagt 156  Q
    |||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  |||||| | |||||| | |    
T  34510239 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttggaaat 34510140  T
Q  157 tacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
       |||||||||||||| |||||| ||||||  ||||||| ||||| ||||||    
T  34510139 ctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccag 34510087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 21895870 - 21895989
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| |||||||||||  | ||||| | || ||||||||||||| | | ||||||||||||| |||| || |||| ||||||||||||||| | |    
T  21895870 gtagttttgacccttaagttgatctttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctgggaaa 21895969  T
Q  133 gttt-aagaatggatttttg 151  Q
    |||| || ||||||||||||    
T  21895970 gtttaaaaaatggatttttg 21895989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 16759209 - 16759091
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    ||||||||| ||||||||| | |||||||| |||||||||||||| |||   | |||||||||||||  ||| || |||| ||||||||||||||  | |    
T  16759209 gtagttttgacccttaagtcgaaccttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacctgagaaa 16759110  T
Q  133 gtttaagaatggatttttg 151  Q
    ||||||  |||||||||||    
T  16759109 gtttaaagatggatttttg 16759091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 22355839 - 22355921
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  22355839 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 22355921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 22357525 - 22357607
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  22357525 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 22357607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 49261690 - 49261605
Alignment:
Q  167 ctcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||||||| |||||||  |||||||||||| || ||||||||||||| | ||| |||||||||| |||||  |||||||||    
T  49261690 ctcgccatggcgaatagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatctttgtcgcac 49261605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 21342631 - 21342513
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| ||||||||||| |||||||| | ||||||||| ||||| ||||  |||||||||||||  ||| || |||| ||||| ||||||||| |     
T  21342631 gtagttttgacccttaagttgaaccttagatgattttgagtgtctgaa-tatgtataataatgattaggcaagtttttagattgagaatgaacctgggaa 21342533  T
Q  132 agtttaagaatggatttttg 151  Q
    | ||| | ||||||||||||    
T  21342532 aattttaaaatggatttttg 21342513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 21347496 - 21347378
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| ||||||||||| |||||||| | ||||||||| ||||| ||||  |||||||||||||  ||| || |||| ||||| ||||||||| |     
T  21347496 gtagttttgacccttaagttgaaccttagatgattttgagtgtctgaa-tatgtataataatgattaggcaagtttttagattgagaatgaacctgggaa 21347398  T
Q  132 agtttaagaatggatttttg 151  Q
    | ||| | ||||||||||||    
T  21347397 aattttaaaatggatttttg 21347378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 208
Target Start/End: Complemental strand, 22532729 - 22532577
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  |||||| | |||||| |     
T  22532729 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaggattgtagaatgaacttttggaaa 22532630  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccca 208  Q
    |   || ||||||||||| || ||| ||||||  ||||||||||||| |||||    
T  22532629 tctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgaccca 22532577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 26065441 - 26065357
Alignment:
Q  70 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  26065441 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 26065357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 27250394 - 27250476
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||| |||||||||||||||    
T  27250394 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctggaat 27250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 35260852 - 35260898
Alignment:
Q  168 tcgccatggcgagtagaggccatcgcctcgcgagttacccagttaca 214  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  35260852 tcgccatagcgagtagaggccctcgcctcgcgagtttcccagttaca 35260898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 50687097 - 50687031
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  50687097 taataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 50687031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 16367881 - 16367968
Alignment:
Q  67 ttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||||| ||||||  |||||||||||  ||| || |||| ||||| ||||||||||| |||||||  |||||||||||||    
T  16367881 ttttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagaatgaacctggaaaagtttaaagatggatttttggg 16367968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 20919051 - 20918990
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 127  Q
    |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  20919051 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 20918990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 16759005 - 16758949
Alignment:
Q  162 ctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    ||||||||||||| || |||||||||| || ||||||||||| || |||||||||||    
T  16759005 ctgaactcgccatagcaagtagaggccctcacctcgcgagttgcctagttacagaat 16758949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 35260729 - 35260813
Alignment:
Q  70 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||  | ||||||| ||||||||||||||    
T  35260729 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttggg 35260813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 20846891 - 20846966
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||| | |||||||||||||||| | | |||||||||||||  |||| | ||| |||||||||||||||||||    
T  20846891 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaat 20846966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 41049619 - 41049726
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||| | |||||||| |||| ||||||||||||| | | |||||||| ||||  ||| || |||| ||||||||||||||| | ||||| | |||| |    
T  41049619 ttaagtcgaaccttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctgggaaagtttgaaaatgaa 41049718  T
Q  146 tttttggg 153  Q
    ||||||||    
T  41049719 tttttggg 41049726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 38801056 - 38801138
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| || ||||| || ||||||||||||||| | | ||||||||||||| ||||| | ||| ||| |||||||||||||||    
T  38801056 agttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctggaat 38801138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 38801157 - 38801199
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    |||||||||||||| |||||||||||||  |||||||||||||    
T  38801157 acctgaactcgccacggcgagtagaggctctcgcctcgcgagt 38801199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 21861335 - 21861372
Alignment:
Q  162 ctgaactcgccatggcgagtagaggccatcgcctcgcg 199  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  21861335 ctgaactcgccatagcgagtagaggccctcgcctcgcg 21861372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 22354338 - 22354387
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||||||||||  ||||||||| ||| ||||||    
T  22354338 acctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccag 22354387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 16093508 - 16093572
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttg 151  Q
    ||||||||||| |  ||| || |||| ||||||||||||||||| |||| || ||||||||||||    
T  16093508 taataatgatttggcaagtttttagattgagattgaacctggaaaagttaaaaaatggatttttg 16093572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 24087842 - 24087730
Alignment:
Q  89 ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggcc 188  Q
    |||||||||||  ||  || |||| |||||||||||  |||||||  | |||||||||| ||| | |||  |||  |||||||| ||||||||||||||     
T  24087842 ataatgattaggcaaagttttagactgagattgaactcggaatagagtcagaatggattcttgagtgttttaccctaactcgccgtggcgagtagaggct 24087743  T
Q  189 atcgcctcgcgag 201  Q
     ||||||||||||    
T  24087742 ctcgcctcgcgag 24087730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 249
Target Start/End: Original strand, 5760 - 5976
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    |||| |||| || |||||||| | |||||| |||||||||| ||||||| | | ||||||||||||| ||| ||| |||| |||||||||||| | ||||    
T  5760 gtagatttgacctttaagttgaatcttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaaccagtaata 5859  T
Q  133 gtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggtt 231  Q
    ||||||| ||||||||| | || || |||||||||||||| | ||||||||||||| ||||||||||| ||||||||||||| ||| | ||| |||||||    
T  5860 gtttaaggatggatttt-gtgatttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtttaggtt 5958  T
Q  232 aaatgcgatacttgtcgc 249  Q
    |||||||||  |||||||    
T  5959 aaatgcgatctttgtcgc 5976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 34 - 249
Target Start/End: Original strand, 666 - 888
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattga------acct 126  Q
    |||| |||| || |||||||| | |||||| |||||||||||||||||| | | ||||||||||||| ||||||| |||| |||||||||      ||||    
T  666 gtagatttgacctttaagttgaatcttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattgagattgaacct 765  T
Q  127 ggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-t 225  Q
    | ||||||||||| ||||||||| | ||||| |||||||||||||| | ||||||||||||| ||||||||||| ||||||||||||| ||| | ||| |    
T  766 gtaatagtttaaggatggatttt-gtgagttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtt 864  T
Q  226 taggttaaatgcgatacttgtcgc 249  Q
    |||||||||||||||  |||||||    
T  865 taggttaaatgcgatctttgtcgc 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 19726 - 19530
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| || ||||  |||||||||||||||||||||   ||| |||||| ||||||  | |    
T  19726 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattttagaatgaatttttatgtg 19627  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcac 251  Q
    || |||||||||||||||||||||| ||||||  ||||||||||| | ||||||||||||||| ||||  ||| |||||||||||| ||||||||||    
T  19626 ttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccagttacagaatgtcttgcttatgttaaatgcgatccttgtcgcac 19530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 590 - 405
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    |||||||  ||||||||||||| ||| | | ||||||||||||| |||||||  ||||||||||||||| |||||   ||| |||||| ||||||| |||    
T  590 ccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattttagaatgaatttttgtgag 491  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgat 240  Q
    || |||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||| ||||  ||| ||||||||||||    
T  490 ttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgtcttgcttatgttaaatgcgat 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 65 - 251
Target Start/End: Original strand, 2313 - 2500
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacct 163  Q
    |||||||||||||||||| | | ||||||||||||| |||||||  ||| |||||||||||||||| ||||| ||||| | | || ||||||||| ||||    
T  2313 gtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggattagtt-aagaacgtacttgtgggagttatacct 2411  T
Q  164 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||||||||||||||||||||| ||||||||| ||  | ||||||||||| | ||| ||||| ||||||||||  |||||||||    
T  2412 gaactcgccatggcgagtagaggccattgcctcgcgaattgactagttacagaatgccttgtttaggataaatgcgatctttgtcgcac 2500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 9536 - 9341
Alignment:
Q  57 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat-agtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | |||||| |||||| ||||| | |||| |||||||| ||||||||  |||||| ||||| ||||||| ||    
T  9536 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtga 9438  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
      |  ||||||||||||||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||||||||||||||| ||||||||||    
T  9437 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaatgcgatccttgtcgcac 9341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 227942 - 227849
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttac 159  Q
    |||||||||||| ||| | | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagttac 227849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 225769 - 225705
Alignment:
Q  154 agttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    ||||||||||||| |||||||  | |||||||||| | ||||||||||||||  |||||||||||    
T  225769 agttacacctgaaatcgccataacaagtagaggcccttgcctcgcgagttacatagttacagaat 225705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 45450 - 45647
Alignment:
Q  57 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctgg-aatagtttaagaatggatttttgg- 152  Q
    ||||||| ||||||||||||||||| |||||  |||||||||||| |||||||   |||||||||||||||||| || | |||| ||||| |||||| |     
T  45450 ccttagatgtttttgagtgcctgaa-tatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagacttta-gaatgaattttttgt 45547  T
Q  153 gagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcac 251  Q
    || ||  ||||||||||||||||||||||||||||  |||||||||||| || | ||||||||||| ||||  ||||| ||||||||||  |||||||||    
T  45548 gaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttaggataaatgcgatctttgtcgcac 45647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 251
Target Start/End: Complemental strand, 6987 - 6800
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttt-tgggagttacacctg 164  Q
    ||||||||||||| || | | ||||||| ||||| |||||||  ||| |||||||||||||||||||||||||||| | |  || ||||||||| |||||    
T  6987 ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaatagtttaagaacgaaacttgtgggagttatacctg 6888  T
Q  165 aactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
    ||||||||||||||||| |||||| || |||||||| ||  | ||||||| ||| | ||| ||||| ||||||||||  |||||||||    
T  6887 aactcgccatggcgagtggaggccctcccctcgcgaattgactagttacaaaatgccttgtttaggataaatgcgatctttgtcgcac 6800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 8824 - 8784
Alignment:
Q  162 ctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  8824 ctgaactcgccatagcgagtagaggccctcgcctcgcgagt 8784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 12478 - 12329
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    |||||||||  ||||||||||    ||||| | ||||||||| |||||| | | ||||||||||||| ||||||| |||| |||||||||||||||||||    
T  12478 gtagttttgatccttaagttgatatttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaata 12379  T
Q  133 gtttaagaatggatttttgggagttacacctgaactcgccatggcgagtag 183  Q
    | |||||||||||||||| ||||||||| ||||| | ||||| ||||||||    
T  12378 g-ttaagaatggattttttggagttacaactgaatttgccatagcgagtag 12329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 161145 - 160949
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga-atagtttaagaatggatttttggga 154  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||| | | ||| |||||| ||||||| ||    
T  161145 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagacttt-agaatgaatttttgtga 161047  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcac 251  Q
      |  ||||||| ||||||||||||||||||||  || |||| |||| || | ||||||||||| |||| |||||| |||||| |||  |||||||||    
T  161046 actgaacctgaagtcgccatggcgagtagaggctctcacctcacgaggtaactagttacagaatgtcttggttaggataaatgtgatctttgtcgcac 160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 218
Target Start/End: Original strand, 1748 - 1900
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctga 165  Q
    |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||   ||| |||||| |  ||||| | |   ||||||    
T  1748 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttggaaatctgacctga 1847  T
Q  166 actcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    | ||||||||||||| ||||||  ||||||||||||| |||||||||||||||    
T  1848 attcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaat 1900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 4968 - 4814
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg-aatagtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | |||||||||||||||||||| || | ||| |||||| |  |||||||    
T  4968 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 4869  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   ||||||||||||||||||||| ||||||  |||| |||||||| ||||||    
T  4868 atctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccag 4814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 12550 - 12396
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg-aatagtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | |||||||||||||||||||| || | ||| |||||| |  |||||||    
T  12550 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 12451  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   ||||||||||||||||||||| ||||||  |||| |||||||| ||||||    
T  12450 atctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccag 12396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 22502 - 22348
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg-aatagtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | |||||||||||||||||||| || | ||| |||||| |  |||||||    
T  22502 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 22403  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   ||||||||||||||||||||| ||||||  |||| |||||||| ||||||    
T  22402 atctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccag 22348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 202
Target Start/End: Complemental strand, 133113 - 132967
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||    || |||||| | ||||| ||     
T  133113 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaattttgtgaa 133014  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
     |  ||||||||||||||||||||| ||||||  |||||||||||||    
T  133013 ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 240
Target Start/End: Original strand, 39864 - 40018
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagagg 186  Q
    |||||||| |||| |||||||  ||| ||| ||| |||||||||||||||||||| | | || ||||||||| ||||||||| |||||||| ||||||||    
T  39864 taataatggttaggaaagattggagattgacattcaacctggaatagtttaagaacgaacttgtgggagttatacctgaacttgccatggcaagtagagg 39963  T
Q  187 ccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgat 240  Q
    |  |||||||||||| || | ||||||| |||  |||  ||||||||||||||||    
T  39964 ctctcgcctcgcgagctaactagttacaaaatgccttatttaggttaaatgcgat 40018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 101854 - 101781
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 129  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||||||||||||||||||||    
T  101854 ccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctgga 101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 12388 - 12228
Alignment:
Q  57 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggga 154  Q
    ||||||| | ||||||||| ||||| |||||  |||||||||||| ||||| | ||||||||||||||||||||| || || ||||||| | |||| |||    
T  12388 ccttagatgcttttgagtgtctgaa-tatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttgga 12291  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
         ||||||||||||||||||||||||||||  || ||||||||||| |||| ||||||||    
T  12290 aactgacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaa 12228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 10283 - 10385
Alignment:
Q  138 agaatggatttttgggagttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgc 237  Q
    |||||| ||||||| |||||||||||||||||||||  ||||||||||||  ||||||||||||||  || |||||| | | | ||||||||||||||||    
T  10283 agaatgaatttttgtgagttacacctgaactcgccaaagcgagtagaggctctcgcctcgcgagttgtcctgttacatactgccttgttaggttaaatgc 10382  T
Q  238 gat 240  Q
    |||    
T  10383 gat 10385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 10228 - 10289
Alignment:
Q  56 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatga 116  Q
    |||||||| |||||||||||||||||| | | ||||||||||||| ||||||| ||||||||    
T  10228 accttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagattttagaatga 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 202
Target Start/End: Complemental strand, 32543 - 32397
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||    || |||||| | ||||| ||     
T  32543 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaattttgtgaa 32444  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
     |  ||||||||||||||||||||| ||||||  || ||||||||||    
T  32443 ctgaacctgaactcgccatggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 27281 - 27400
Alignment:
Q  35 tagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatag 133  Q
    |||||||| ||||||||||| || ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||  ||||||||||||||| | |     
T  27281 tagttttgacccttaagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgggaaat 27380  T
Q  134 tttaagaatggatttttggg 153  Q
    ||||||||||||||||||||    
T  27381 tttaagaatggatttttggg 27400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 27485 - 27526
Alignment:
Q  162 ctgaactcgccatggcgagtagaggccatcgcctcgcgagtt 203  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  27485 ctgaactcgccatagcgagtagaggccctcgcctcgcgagtt 27526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 3937 - 3855
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| |  ||||||||||||||| |||  || |||||||||| ||||| | ||| |||||||||||||||||||    
T  3937 agttgaaccttagatgactttgagtgcctgaac-atgactagtaatgattaggaaagaatgtaggatgagattgaacctggaat 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 8001 - 7919
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| |  ||||||||||||||| |||  || |||||||||| ||||| | ||| |||||||||||||||||||    
T  8001 agttgaaccttagatgactttgagtgcctgaac-atgactagtaatgattaggaaagaatgtaggatgagattgaacctggaat 7919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 218
Target Start/End: Complemental strand, 17240 - 17078
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatag-tttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||| |||| ||| |||||  |  |||| ||    
T  17240 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-atagattttagaataaaactttgaga 17142  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
     |   ||||||||||||||||||||| ||||||  ||||||||||||| ||| | |||||||||    
T  17141 atatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaat 17078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 7841 - 7931
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcac 251  Q
    |||||||||||||| ||||||| ||||  |||||||||||||| |||||||||| ||| | |||||||| ||||||||||  |||||||||    
T  7841 cctgaactcgccatagcgagtaaaggctctcgcctcgcgagttgcccagttacaaaatgccttgttagggtaaatgcgatctttgtcgcac 7931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 28935 - 29011
Alignment:
Q  51 gttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 126  Q
    |||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||    
T  28935 gttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 29011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 24169 - 24279
Alignment:
Q  45 ccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaat- 142  Q
    |||||||||| | |||||| | |||||||||||||||  ||| |||||||||||||  ||| || |||| ||||||||||||||||||||||||| |||     
T  24169 ccttaagttgaagcttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaatagtttaaaaatg 24268  T
Q  143 ggatttttggg 153  Q
    |||||||||||    
T  24269 ggatttttggg 24279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 20087 - 20247
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga-tttttggga 154  Q
    ||||||| | |||||||| ||||||| | | ||||||||| ||| ||||| | ||||||||||||||||||||| || || ||||||| | ||||||| |    
T  20087 ccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttggaa 20185  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
    | |  ||||||||||||||||||||||||||||  ||||||||| |||| || | ||||||||    
T  20186 gctg-acctgaactcgccatggcgagtagaggctctcgcctcgcaagttgcctaattacagaa 20247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 28470 - 28666
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct-ggaatagtttaagaatggatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||  ||| | ||| |||||| | ||||| ||    
T  28470 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagacttt-agaatgaaattttgtga 28568  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
      |  ||||||||||||||||||||| ||||||  |||||||||||||      |||||||||| | ||| ||||||||||||||||  |||||||||    
T  28569 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttgtttaggttaaatgcgatctttgtcgcac 28666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 25726 - 25879
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||| ||   ||  |||||| |||||||| |     
T  25726 ccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaatttttggaaa 25825  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |   |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  25826 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 25879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 45; Significance: 1e-16; HSPs: 6)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 63021 - 62913
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| |||||||||||| ||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||||| ||||||| |||    
T  63021 ccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatattttagaatgaatttttgtgag 62922  T
Q  156 ttacacctg 164  Q
    || ||||||    
T  62921 ttgcacctg 62913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 136132 - 136207
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    |||||||||||||| ||||||||||||  ||||||||||||||  ||| ||| ||||  | |||||||||||||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgtccatttatagaacaccttgttaggttaaatg 136207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 144840 - 144915
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    |||||||||||||| ||||||||||||  ||||||||||||||  ||| ||| ||||  | |||||||||||||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgtccatttatagaacaccttgttaggttaaatg 144915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 135942 - 136049
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||| | ||||||||||  | ||||||| ||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| |||| |    
T  135942 ttaagtcgaaccttagaggactctgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaa 136041  T
Q  146 tttttggg 153  Q
    ||||||||    
T  136042 tttttggg 136049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 144650 - 144757
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||| | ||||||||||  | ||||||| ||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| |||| |    
T  144650 ttaagtcgaaccttagaggactctgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaa 144749  T
Q  146 tttttggg 153  Q
    ||||||||    
T  144750 tttttggg 144757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 124940 - 124891
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  124940 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 124891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 2311 - 2159
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttt-tggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  |||||| |  || |||||    
T  2311 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 2212  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccc 207  Q
     |   |||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  2211 ttctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccc 2159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 119200 - 119280
Alignment:
Q  45 ccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaac 124  Q
    |||||||||| || ||||| | ||||||||||||||| ||||||  |||||||||||| ||| || |||| |||||||||||    
T  119200 ccttaagttgaacattagatgattttgagtgcctgaa-tatgtataataatgattagacaagtttttagattgagattgaac 119280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 6053 - 5966
Alignment:
Q  57 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg 143  Q
    ||||||| ||||||||||||||||||   | ||||||||||||| |||||||  ||| ||||||||||| ||||||||||||||||||    
T  6053 ccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaacttggaatagtttaagaatg 5966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 16876 - 17029
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||||| || || ||||||  | |||||| |    
T  16876 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa-agatttagaatgaaacttttggaa 16974  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| || ||| ||||||  ||||||||||||| ||||||    
T  16975 ttctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccag 17029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 79016 - 79096
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 129  Q
    ||||| |||||||| | |||||||||| ||||| | | ||||||||||||| || || | |||||||||||||||||||||    
T  79016 agttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 79107 - 79151
Alignment:
Q  173 atggcgagtagaggccatcgcctcgcgagttacccagttacagaa 217  Q
    |||||||||||||||  |||||||||||||| |||| ||||||||    
T  79107 atggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 79151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 15276 - 15422
Alignment:
Q  57 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaatag-tttaagaatggatttttggg 153  Q
    ||||||| | ||||||||||||||| |||||  |||||||||||| ||||| | ||||||||||||||| |||| |||| ||| |||||| |  ||||||    
T  15276 ccttagatgcttttgagtgcctgaa-tatgtttaataatgattaggaaagaatgtagaatgagattgaatctgg-atagattttagaatgaaactttggg 15373  T
Q  154 agttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    | |   ||||||||||||||| ||||| ||||||  |||||||||||||    
T  15374 aatctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagt 15422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 13124 - 13007
Alignment:
Q  37 gttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtt 135  Q
    |||||| ||||||||||| || ||||| | |||||||||||||| | | | || ||||||||||  ||| || |||| ||||||||||||||  | ||||    
T  13124 gttttgacccttaagttgaactttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacctgagaaagtt 13025  T
Q  136 taagaatggatttttggg 153  Q
    ||| ||||||||||||||    
T  13024 taaaaatggatttttggg 13007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 802 - 649
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | |||||||||||||||||| |||    || |||||| |  ||| |||     
T  802 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctagaaagaatttagaatgaaacttttggaa 703  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |   | |||||||||||  |||||||||||||  ||||||||||||| ||||||    
T  702 tctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccag 649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 3920 - 3777
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaat-ggatttttgggagttacacctg 164  Q
    ||||||||| |||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||  ||  |||||   | || ||||| |   |||||    
T  3920 ttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgattgtagaatcaaacttgtgggattctgacctg 3821  T
Q  165 aactcgccatggcgagtagaggccatcgcctcgcgagttaccca 208  Q
    ||||||||| |||||| ||||||  ||||||||||||| |||||    
T  3820 aactcgccacggcgagcagaggctctcgcctcgcgagtgaccca 3777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 14119 - 14004
Alignment:
Q  37 gttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaatagt 134  Q
    |||||| ||||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||  ||| || |||| |||||||| |||||| |  ||    
T  14119 gttttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggtaagtttttagattgagattggacctggtaatgt 14021  T
Q  135 ttaagaatggatttttg 151  Q
    |||| ||||||||||||    
T  14020 ttaaaaatggatttttg 14004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 11178 - 11260
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| ||||||||   |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  11178 agttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 11260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 208
Target Start/End: Original strand, 16260 - 16413
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||   |||  |||||  |  ||||| |    
T  16260 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaaagattttcgaatgaaacgtttggaa 16359  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccca 208  Q
     |   ||||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  16360 atctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccca 16413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 39219 - 39067
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||||| || ||  ||||| |  ||  |||     
T  39219 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa-agattttgaatgaaacttgtggat 39121  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |   |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  39120 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 39067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 53113 - 53230
Alignment:
Q  38 ttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    ||||| ||||||||||| || ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | |||||    
T  53113 ttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagttt 53212  T
Q  137 -aagaatggatttttggg 153  Q
     || ||||||||||||||    
T  53213 aaaaaatggatttttggg 53230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 53314 - 53354
Alignment:
Q  162 ctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  53314 ctgaactcgccatagcgagtagaggccctcgcctcgcgagt 53354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 7948 - 8029
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||| ||||||| ||||| | ||| ||||||||||||||||||    
T  7948 agttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 8029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 15866 - 15921
Alignment:
Q  163 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 218  Q
    |||||||||||| ||||||| ||||| |||||||||||||| ||||||||||||||    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaat 15921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 13636 - 13570
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||||||||||||  ||| || |||| ||||||||||||||| | ||||||||||||||||||||||    
T  13636 taataatgattaggcaagtttttagattgagattgaacctgggaaagtttaagaatggatttttggg 13570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 3231 - 3133
Alignment:
Q  56 accttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||||||| | ||||||||||||||| ||||||  |||||||||||  ||| || |||| ||||||||||| ||| | ||||||| ||||||||||||||    
T  3231 accttagatgattttgagtgcctgaa-tatgtacaataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttggg 3133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 19649 - 19724
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    |||||||||||||| | ||||||||||  |||||||| ||||| |||||||||||||  | |||||||||||||||    
T  19649 cctgaactcgccatagggagtagaggctctcgcctcgtgagttgcccagttacagaacaccttgttaggttaaatg 19724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 40268 - 40198
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggt 230  Q
    |||||||||||||| |||||||||||||  ||||||||||||| ||||||  ||||| | | |||||||||    
T  40268 acctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggt 40198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 103234 - 103341
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatgga 145  Q
    |||||| | |||||||||| || ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| |||| |    
T  103234 ttaagtcgaaccttagaggattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaa 103333  T
Q  146 tttttggg 153  Q
    ||||||||    
T  103334 tttttggg 103341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 103403 - 103478
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 236  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||  ||| ||||||||  | |||||||||||||||    
T  103403 cctgaactcgccatagcgagtagaggctctcgcctcacgagttgtccatttacagaacaccttgttaggttaaatg 103478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 80788 - 80701
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| ||||||||||||||    
T  80788 ttttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 80701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 128735 - 128775
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||| ||||||||||||  ||||||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 128775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 2464 - 2609
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | |||||||| ||||||| | | ||||||||||||| |||||||  |||||||| ||||||||| ||   ||| |||||| | |||  | |     
T  2464 ccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaatttgtgaac 2563  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagt 202  Q
    | | ||||||||||||||||||||||||||||  |||||||||||||    
T  2564 tga-acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 356 - 211
Alignment:
Q  65 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagtt-acacc 162  Q
    |||||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||| || || |||||| |  |||  |||||   |||    
T  356 gtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-agatttagaatgaaactttttgagttctgacc 258  T
Q  163 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||  ||||||||||||  ||||| ||||||| ||||||    
T  257 tgaactcgccacagcgagtagaggctctcgccacgcgagtgacccag 211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 34587 - 34509
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 127  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  34587 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 34509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 13447 - 13398
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  13447 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 13398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 2099 - 2177
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 127  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  2099 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 52372 - 52218
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatg-gatttttggga 154  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  ||||||  | || |||||    
T  52372 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 52273  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
     |   |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  52272 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 52218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 167644 - 167721
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 126  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||    
T  167644 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 167721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 167745 - 167794
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  167745 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 167794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 2739 - 2820
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  2739 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 2820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 8185 - 8298
Alignment:
Q  88 aataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggc 187  Q
    ||||||||||||  ||| || |||||||||||||||| ||||||||| | |||||||||| ||| | |||  |||  || ||||| ||||||||||||||    
T  8185 aataatgattaggcaaggttttagaatgagattgaacttggaatagtgtcagaatggattcttgagtgttttaccctaaatcgccgtggcgagtagaggc 8284  T
Q  188 catcgcctcgcgag 201  Q
      || |||||||||    
T  8285 tctcacctcgcgag 8298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 623 - 695
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||||| ||||| ||||||||||||||    
T  623 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctgg 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 1344 - 1461
Alignment:
Q  37 gttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtt 135  Q
    |||||| |||| |||||| || | ||| | |||||||||||||||| | | || ||||||||||| ||| || |||| ||||||||||||||  | ||||    
T  1344 gttttgaccctaaagttgaacttcagatgattttgagtgcctgaacatgtatattaatgattagacaagtttttagattgagattgaacctgagaaagtt 1443  T
Q  136 taagaatggatttttggg 153  Q
    ||| ||||||||||||||    
T  1444 taaaaatggatttttggg 1461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 28996 - 28924
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg 128  Q
    ||||||| | |||||||| ||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||    
T  28996 ccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 208
Target Start/End: Original strand, 32619 - 32772
Alignment:
Q  56 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggga 154  Q
    |||||||| | ||||||||| |||||| | | ||||||||||||| || || |  |||||||||||||||||| ||   ||| |||||| ||||||| ||    
T  32619 accttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaatttttgtga 32718  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccca 208  Q
    ||| ||||  |||||||||  ||||| ||||||   |||||||||||| |||||    
T  32719 gttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgaccca 32772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 208
Target Start/End: Complemental strand, 46386 - 46233
Alignment:
Q  56 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggga 154  Q
    |||||||| | ||||||||| |||||| | | ||||||||||||| || || |  |||||||||||||||||| ||   ||| |||||| ||||||| ||    
T  46386 accttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaatttttgtga 46287  T
Q  155 gttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccca 208  Q
    ||| ||||  |||||||||  ||||| ||||||   |||||||||||| |||||    
T  46286 gttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgaccca 46233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 16537 - 16473
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    |||||||||||||||| | | ||||||||||||| ||||| | ||| | ||||||||||||||||    
T  16537 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaa 16473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 1962 - 2158
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| ||||||||||  |||||| | | ||||||||||||| |||||||  ||||||||||||||| |  ||    || |||||| | ||||| ||     
T  1962 ccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaagactttagaatgaaattttgtgaa 2061  T
Q  156 ttacacctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcac 251  Q
     |  |||||||||||||||||| || ||||||  |||||||||||||      |||||||||| | ||| |||||||||||||||| ||||||||||    
T  2062 ctgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttgtttaggttaaatgcgatccttgtcgcac 2158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 5782 - 5854
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||||| ||| ||||||||||||||||    
T  5782 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgg 5854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 7213 - 7095
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    |||||||||  |||||||||| |  ||||| | ||||||||| ||||| ||||||  |||||||||||  ||| || |||| ||||||||||||||| |     
T  7213 gtagttttgaaccttaagttgaattttagatgattttgagtgactgaa-tatgtataataatgattaggcaagtttttagattgagattgaacctgggaa 7115  T
Q  132 agtttaagaatggatttttg 151  Q
    ||||||| ||||||||||||    
T  7114 agtttaaaaatggatttttg 7095  T

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Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 717 - 799
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | ||||||||||||||| |||||  |||||||||||| ||||| | ||| |||||||||||||||||||    
T  717 agttgaaccttagatgcttttgagtgcctgaa-tatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 818 - 867
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  818 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccag 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 10097 - 10173
Alignment:
Q  56 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  10097 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 10173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 20572 - 20425
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggag 155  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||| ||||||||||||||| || || |||||| |  ||| ||||    
T  20572 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaa-agatttagaatgaaacttttggag 20474  T
Q  156 tt-acacctgaactcgccatggcgagtagaggccatcgcctcgcgagtt 203  Q
    ||   |||||| ||||||| | |||| ||||||  ||||||||||||||    
T  20473 ttctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagtt 20425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 201
Target Start/End: Complemental strand, 20863 - 20717
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttta-agaatg-gatttttggg 153  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||| || ||| ||||||  | || ||||    
T  20863 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-agattatagaatgaaacttgtggg 20765  T
Q  154 agttacacctgaactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    | |   |||||||||||||| |||||| ||||||  ||||||||||||    
T  20764 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 20717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 25632 - 25545
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttggg 153  Q
    |||||||||||||||  | | |||||||||||||  ||| || |||| ||||||||||| ||||| ||||||| ||||||||||||||    
T  25632 ttttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaacttggaaaagtttaaaaatggatttttggg 25545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 4796 - 4878
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  4796 agttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 13951 - 13869
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||  | ||| |||||||||||||||||||    
T  13951 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctggaat 13869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 392 - 310
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||| |||||||    
T  392 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaat 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 5168 - 5086
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||| |||||||    
T  5168 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaat 5086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 291 - 243
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccca 208  Q
    ||||||||||||||||||||| ||||||  ||||||||| ||| |||||    
T  291 acctgaactcgccatggcgagcagaggctctcgcctcgcaagtgaccca 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 5067 - 5019
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccca 208  Q
    ||||||||||||||||||||| ||||||  ||||||||| ||| |||||    
T  5067 acctgaactcgccatggcgagcagaggctctcgcctcgcaagtgaccca 5019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 17668 - 17742
Alignment:
Q  56 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 129  Q
    |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||    
T  17668 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 17742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 18619 - 18693
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  18619 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 18693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 29239 - 29149
Alignment:
Q  39 tttgccccttaagttggaccttagaggtttttgagtgcctgaa-ctatgtaataatgattagaaaagattctagaatgagattgaacctgg 128  Q
    |||| ||||||||||| |||||||| | |||||||||||||||  ||| |||||||||||||  ||| || |||| |||||||| ||||||    
T  29239 tttgtcccttaagttgaaccttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattgagattggacctgg 29149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 714 - 791
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 126  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||    
T  714 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 815 - 864
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  815 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 16738 - 16657
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 127  Q
    |||||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| | |||||||||||||    
T  16738 ttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctg 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 16118 - 16047
Alignment:
Q  57 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctg 127  Q
    ||||||| | ||||||||||||||| |||||  |||||||||||| ||||| | |||||||||||||||||||    
T  16118 ccttagatgcttttgagtgcctgaa-tatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 16047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 17909 - 18021
Alignment:
Q  39 tttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagttt 136  Q
    |||| ||||||||||| ||||||||   |||||||||| |||| ||||||  |||||||||||  ||| || |||| |||||||| |||||| |  ||||    
T  17909 tttgtcccttaagttgaaccttagataattttgagtgcatgaa-tatgtataataatgattaggcaagtttttagattgagattggacctgggaaggttt 18007  T
Q  137 aagaatggattttt 150  Q
    || |||||||||||    
T  18008 aaaaatggattttt 18021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 374 - 338
Alignment:
Q  165 aactcgccatggcgagtagaggccatcgcctcgcgag 201  Q
    |||||||||||||||||||||||| ||||||||||||    
T  374 aactcgccatggcgagtagaggccctcgcctcgcgag 338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 8203 - 8267
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  8203 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 8267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 15127 - 15213
Alignment:
Q  47 ttaagttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaata 132  Q
    |||||||| ||| |||| | |||||||||||| || |||||  |||||||||||| ||||| | ||| ||||||||||||||||||||    
T  15127 ttaagttgaaccgtagatgcttttgagtgccttaa-tatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaata 15213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 1562 - 1633
Alignment:
Q  161 cctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtta 232  Q
    |||||||||||||| ||||||||||||  |||||||| ||| | |||| ||||||||  | |||||||||||    
T  1562 cctgaactcgccatagcgagtagaggctctcgcctcgtgagatgcccaattacagaacaccttgttaggtta 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 684 - 827
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggatttttgggagttacacctga 165  Q
    |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||| ||| ||   ||  |||||| | |||||| | |   ||||||    
T  684 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaatctgaaaagattgtagaatgaacttttggaaatctgacctga 783  T
Q  166 actcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||| || |||  |||||  ||||||||||||| ||||||    
T  784 actcgccacggtgagcggaggctctcgcctcgcgagtgacccag 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 35508 - 35625
Alignment:
Q  34 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||| ||||||||||| |||||| | | ||||||||||||||| ||||  |||||||||||||  ||| || |||| |||||| | |||||  |     
T  35508 gtagttttgtcccttaagttgaaccttaaatgattttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagatcggacctgagaa 35606  T
Q  132 agtttaagaatggattttt 150  Q
    ||||||| | |||||||||    
T  35607 agtttaaaagtggattttt 35625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 268157 - 268094
Alignment:
Q  87 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaatggattttt 150  Q
    |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| |||||||||||    
T  268157 taataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggattttt 268094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 1370 - 1288
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaactatg-taataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| |  |||||||||||||||  |  ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  1370 agttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaat 1288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 5304 - 5222
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||| ||||  | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  5304 agttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 13262 - 13340
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 127  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||| ||||    
T  13262 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcctg 13340  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 32520 - 32438
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||| ||| ||||| | | | |||||||||||||||||||    
T  32520 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctggaat 32438  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 21357 - 21275
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| |||||| ||||||||||| | | ||||||||||||  ||||| | ||| ||||||||| |||||||||    
T  21357 agttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctggaat 21275  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 39592 - 39666
Alignment:
Q  57 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    ||||||| | |||||||| ||||||| | | || |||||||||| ||||| | ||||||||||||||||||||||    
T  39592 ccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaa 39666  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 40306 - 40242
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    |||||||||||||||| | | ||||||||||||| ||||| |  || ||||||||||||||||||    
T  40306 ttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaa 40242  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 39832 - 39783
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  39832 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 39783  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 74980 - 75029
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 209  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  74980 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 75029  T

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Target: scaffold0309 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 6965 - 6917
Alignment:
Q  160 acctgaactcgccatggcgagtagaggccatcgcctcgcgagttaccca 208  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| |||||    
T  6965 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccca 6917  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 47442 - 47360
Alignment:
Q  50 agttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||| |||||||| | ||||||||| ||||| |||||  |||||||||||| || || | ||| |||||||||||||||||||    
T  47442 agttgaaccttagatgcttttgagtgtctgaa-tatgtctaataatgattaggaatgaatgtaggatgagattgaacctggaat 47360  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 23973 - 24037
Alignment:
Q  67 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 130  Q
    |||||||||||||||| | | ||||||||||||| ||| | | ||| ||||||||||||||||||    
T  23973 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 24037  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 52017 - 51953
Alignment:
Q  68 tttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat 131  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||| | |||||||||||||||||    
T  52017 tttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctggaat 51953  T

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