View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10330_high_2 (Length: 616)
Name: NF10330_high_2
Description: NF10330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10330_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 590; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 590; E-Value: 0
Query Start/End: Original strand, 1 - 606
Target Start/End: Original strand, 37602680 - 37603285
Alignment:
| Q |
1 |
ccttcaaccatgcacgtccacatgaaagctgagttaaaagcaacatccatttcctttcaaaatccaacacttttcaacacacaccaaaacactcctcctc |
100 |
Q |
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| T |
37602680 |
ccttcaaccatgcacgtccacatgaaagctgagttaaaagcaacatccatttcctttcaaaatccaacacttttcaacacacaccaaaacactcctcctc |
37602779 |
T |
|
| Q |
101 |
ttcctgaaccagaagaactcaaaggttgtcttggaagcttagatggagcatgtattgaaaagctcttacttcattgtgcaagtgctttggaaagcaatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37602780 |
ttcctgaaccagaagaactcaaaggttgtcttggaagcttagatggagcatgtattgaaaagctcttacttcattgtgcaagtgctttggaaagcaatga |
37602879 |
T |
|
| Q |
201 |
tataaccttagctcaacaagttatgtgggtcttaaacaacgttgcttcaccattaggtgacacaaaccaaagactcacttcatggtttctgagagcatta |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |
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| T |
37602880 |
tataaccttagctcaacaagttatgtgggtcttaaacaacgttgcttcaccattaggtgacactaaccaaagactcacttcctggtttctaagagcatta |
37602979 |
T |
|
| Q |
301 |
atctctagagcttcaaggatttgtcctacttcaatgaatttcaaaggaagtaactacacaattcaaagaaggttgatgtccgttaccgaactcgccgggt |
400 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
37602980 |
atctctagagcttcaaggatttgtcctacttcaatgaatttcaaaggaagtaactacacaattcaaagaagattgatgtccgttaccgaactcgccgggt |
37603079 |
T |
|
| Q |
401 |
atgttgatttaattccttggcataggtttggtttttgtgcttccaacaatgaaattttcaagtcaattaagggattcaaaagggtacatattttagattt |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37603080 |
atgttgatttaattccttggcataggtttggtttttgtgcttccaacaatgaaattttcaagtcaattaagggattcaaaagggtacatattttagattt |
37603179 |
T |
|
| Q |
501 |
tagcataacaccttgtatgcaatggcctacttttatagattctttggctaaattaccagaaggccctccttcacttagaatcacagttccatcttttagg |
600 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37603180 |
tagcataacaccttgtatgcaatggcctacttttatagattctttggctaaattaccagaaggccctccttcacttagaatcacagttccatcttttagg |
37603279 |
T |
|
| Q |
601 |
cctatg |
606 |
Q |
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|||||| |
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| T |
37603280 |
cctatg |
37603285 |
T |
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