View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10330_high_28 (Length: 247)
Name: NF10330_high_28
Description: NF10330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10330_high_28 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3110971 - 3111199
Alignment:
| Q |
1 |
ctgaagcgtcttatttcaattaatgaccttgactgcactgactgcaggatttcctaacagtagggaatctaggtccaccgttttgctgacaaaataagaa |
100 |
Q |
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| T |
3110971 |
ctgaagcgtcttatttcaattaatgacctcgactgcactgactgcaggatttcctaacagtagggaatctaggtccaccgttttgctgacaaaataagaa |
3111070 |
T |
|
| Q |
101 |
attctattgaaacaaaagaatgattataaatgaggaggataagtatcctattagacatattagcctaaaaatttaacttccagtaggaaaaggtcctctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
3111071 |
attctattgaaacaaaagaatgattataaatgaggaggataagtatcctattagacataatagcctaaaaatttaacttccagtaggaaaaggtcctctt |
3111170 |
T |
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| Q |
201 |
cctagtaacaccttgcttgattgcatctc |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
3111171 |
cctagtaacaccttgcttgattgcatctc |
3111199 |
T |
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