View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10330_low_21 (Length: 328)
Name: NF10330_low_21
Description: NF10330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10330_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 19 - 323
Target Start/End: Original strand, 50751668 - 50751972
Alignment:
| Q |
19 |
cagtgatgatgcgcagttgaataagcctaagaaggtggtgaagaagaataaaaatgataataaatgaaggtttggttttgccattttggaagctcaaggt |
118 |
Q |
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| T |
50751668 |
cagtgatgatgcgcagttgaataagcctaagaaggtggtgaagaagaataaaaatgataataaatgaaggtttggttttgccattttggaagctcaaggt |
50751767 |
T |
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| Q |
119 |
gagagagagcatagagtcatagttgtgaaggagtttttgtaacttagaaaggaccttgttgatgaaaagtgtttgatcaaggcatgacttacggtgttgt |
218 |
Q |
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| T |
50751768 |
gagagagagcatagagtcatagttgtgaaggagtttttgtaactttgaaaggacattgttgatgaaaagtgtttgatcaaggcatgacttacggtgttgt |
50751867 |
T |
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| Q |
219 |
ggaccatgcaaatttgttacttttactaattgctattgattgattgatctttgtaccaatcacatttttcttcttcttttttacaaaaattatcttcttc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50751868 |
ggaccatgcaaatttgttacttttactaattgctattgattgattgatctttgtaccaatcacatttttcttcttcttttttacaaaaattatcttcttc |
50751967 |
T |
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| Q |
319 |
tctct |
323 |
Q |
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||||| |
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| T |
50751968 |
tctct |
50751972 |
T |
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