View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10330_low_40 (Length: 242)
Name: NF10330_low_40
Description: NF10330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10330_low_40 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 21 - 232
Target Start/End: Complemental strand, 43392581 - 43392370
Alignment:
| Q |
21 |
cagacacccacattttgcctatactttgaccgtacagttgttgatgacatgaatttatgaacatccgtcaatgttagggttgtatagagtttcaattgaa |
120 |
Q |
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| T |
43392581 |
cagacacacacattttgcctatactttgaccgtacaattgttgatgacatgaatttatgaacatccgtcaatgttagggttgtatagagtttcaattgaa |
43392482 |
T |
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| Q |
121 |
gagaactgttgccaacacactctctttcaaccattttctctattgttggttgaaattatggcatagaaaaactattatagaatatgcatgtatttatatg |
220 |
Q |
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| T |
43392481 |
gagaactgttgccaacacactctctttcaaccattttctctattgttggttgaaattatggcatagaaaaactattatagaatatgcatgtatttatatg |
43392382 |
T |
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| Q |
221 |
tcacaggttctg |
232 |
Q |
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|||||||||||| |
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| T |
43392381 |
tcacaggttctg |
43392370 |
T |
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