View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10330_low_51 (Length: 220)

Name: NF10330_low_51
Description: NF10330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10330_low_51
NF10330_low_51
[»] chr4 (26 HSPs)
chr4 (17-158)||(31307077-31307216)
chr4 (17-168)||(45994503-45994652)
chr4 (14-168)||(14854586-14854738)
chr4 (17-163)||(38766075-38766219)
chr4 (17-168)||(35972324-35972473)
chr4 (16-168)||(38844178-38844328)
chr4 (28-141)||(46016154-46016267)
chr4 (17-159)||(35334109-35334249)
chr4 (17-168)||(13686582-13686732)
chr4 (17-100)||(51626317-51626401)
chr4 (17-99)||(9012317-9012400)
chr4 (14-100)||(13948600-13948687)
chr4 (28-148)||(46250578-46250698)
chr4 (15-158)||(22189397-22189538)
chr4 (17-154)||(17135092-17135226)
chr4 (18-158)||(7096087-7096225)
chr4 (17-78)||(33529325-33529387)
chr4 (16-96)||(3649056-3649137)
chr4 (102-158)||(10199198-10199254)
chr4 (124-168)||(25768768-25768812)
chr4 (18-76)||(9455565-9455624)
chr4 (124-170)||(42615793-42615839)
chr4 (125-170)||(18069340-18069385)
chr4 (63-137)||(11140469-11140540)
chr4 (33-101)||(31308342-31308410)
chr4 (14-89)||(47023459-47023535)
[»] chr7 (21 HSPs)
chr7 (17-158)||(29059796-29059935)
chr7 (17-155)||(31492097-31492233)
chr7 (26-168)||(13254122-13254261)
chr7 (40-168)||(28537371-28537496)
chr7 (17-168)||(19477261-19477409)
chr7 (17-168)||(8839292-8839441)
chr7 (18-168)||(21747052-21747199)
chr7 (35-163)||(40099302-40099427)
chr7 (56-170)||(2657887-2657998)
chr7 (18-158)||(46373664-46373802)
chr7 (28-168)||(7265336-7265473)
chr7 (20-90)||(14544999-14545070)
chr7 (124-168)||(32469911-32469955)
chr7 (17-101)||(20207542-20207627)
chr7 (61-170)||(7190415-7190521)
chr7 (14-168)||(35707828-35707979)
chr7 (125-170)||(42741929-42741974)
chr7 (106-170)||(5319210-5319274)
chr7 (18-120)||(24172236-24172338)
chr7 (60-137)||(40211965-40212039)
chr7 (16-100)||(11486754-11486839)
[»] chr8 (15 HSPs)
chr8 (17-158)||(4125035-4125174)
chr8 (17-168)||(2743914-2744063)
chr8 (17-158)||(12958096-12958235)
chr8 (14-150)||(15682928-15683062)
chr8 (17-158)||(13468756-13468895)
chr8 (17-158)||(30935995-30936134)
chr8 (26-163)||(19715747-19715881)
chr8 (16-159)||(30056011-30056152)
chr8 (14-168)||(36994508-36994660)
chr8 (17-95)||(7839264-7839343)
chr8 (102-170)||(44705651-44705719)
chr8 (18-89)||(8034142-8034213)
chr8 (32-158)||(35206991-35207114)
chr8 (125-168)||(39086799-39086842)
chr8 (34-140)||(44638992-44639095)
[»] chr2 (22 HSPs)
chr2 (34-168)||(12133259-12133390)
chr2 (17-163)||(5394383-5394526)
chr2 (25-158)||(31579249-31579379)
chr2 (17-168)||(42745127-42745276)
chr2 (17-163)||(18105373-18105517)
chr2 (52-158)||(44732620-44732723)
chr2 (26-168)||(9438157-9438296)
chr2 (43-171)||(7157476-7157601)
chr2 (17-168)||(17981479-17981627)
chr2 (17-171)||(7020371-7020521)
chr2 (63-158)||(37568785-37568877)
chr2 (31-96)||(38743788-38743853)
chr2 (34-163)||(993740-993865)
chr2 (17-70)||(25423820-25423874)
chr2 (18-89)||(14121894-14121966)
chr2 (26-158)||(33756968-33757097)
chr2 (29-161)||(39401093-39401222)
chr2 (82-168)||(28365930-28366013)
chr2 (30-163)||(17627545-17627675)
chr2 (60-140)||(24359573-24359650)
chr2 (30-99)||(17658509-17658578)
chr2 (17-96)||(44752205-44752285)
[»] chr5 (13 HSPs)
chr5 (14-158)||(10591918-10592060)
chr5 (17-159)||(31113324-31113464)
chr5 (18-163)||(18909313-18909453)
chr5 (17-101)||(5123509-5123594)
chr5 (17-168)||(30784997-30785146)
chr5 (14-158)||(2798323-2798464)
chr5 (14-158)||(2804490-2804631)
chr5 (56-168)||(28023494-28023603)
chr5 (17-158)||(22188009-22188146)
chr5 (26-79)||(36212963-36213016)
chr5 (61-161)||(12682623-12682720)
chr5 (38-79)||(26558016-26558057)
chr5 (41-89)||(12487303-12487351)
[»] scaffold0182 (1 HSPs)
scaffold0182 (17-148)||(26332-26461)
[»] chr3 (17 HSPs)
chr3 (17-168)||(30995976-30996125)
chr3 (30-158)||(48204336-48204461)
chr3 (17-168)||(25224680-25224829)
chr3 (17-168)||(27763704-27763851)
chr3 (17-160)||(40294601-40294742)
chr3 (17-100)||(20861294-20861378)
chr3 (17-170)||(38331107-38331258)
chr3 (25-147)||(48210980-48211099)
chr3 (15-115)||(43621320-43621420)
chr3 (18-163)||(15283061-15283200)
chr3 (42-168)||(38088616-38088739)
chr3 (102-163)||(42514590-42514651)
chr3 (18-100)||(55123143-55123226)
chr3 (17-89)||(39950269-39950342)
chr3 (43-140)||(9651059-9651153)
chr3 (34-79)||(1642673-1642718)
chr3 (105-170)||(46604657-46604722)
[»] chr1 (23 HSPs)
chr1 (17-168)||(22022101-22022250)
chr1 (26-168)||(9781010-9781144)
chr1 (17-168)||(16756063-16756212)
chr1 (17-152)||(12035546-12035680)
chr1 (14-101)||(36806656-36806744)
chr1 (71-168)||(17600564-17600658)
chr1 (66-167)||(29124727-29124825)
chr1 (17-168)||(28724654-28724802)
chr1 (60-158)||(40019232-40019327)
chr1 (102-170)||(52912600-52912668)
chr1 (26-170)||(10840996-10841138)
chr1 (17-86)||(42297453-42297523)
chr1 (14-75)||(44913180-44913242)
chr1 (59-163)||(45806222-45806323)
chr1 (40-163)||(35692471-35692591)
chr1 (14-97)||(18428150-18428233)
chr1 (60-160)||(36982344-36982441)
chr1 (28-89)||(36522259-36522320)
chr1 (27-75)||(15642526-15642574)
chr1 (35-87)||(33059756-33059808)
chr1 (111-158)||(14500361-14500408)
chr1 (17-58)||(49071665-49071707)
chr1 (27-161)||(32534071-32534201)
[»] chr6 (18 HSPs)
chr6 (17-168)||(21910186-21910334)
chr6 (17-158)||(12411139-12411278)
chr6 (27-158)||(31412114-31412241)
chr6 (17-115)||(12836908-12837004)
chr6 (26-163)||(423641-423775)
chr6 (25-170)||(15614593-15614735)
chr6 (17-141)||(28099251-28099373)
chr6 (102-168)||(21029077-21029143)
chr6 (15-170)||(31107502-31107655)
chr6 (60-100)||(31489561-31489601)
chr6 (18-158)||(25084025-25084163)
chr6 (35-163)||(278378-278502)
chr6 (27-170)||(28933117-28933257)
chr6 (33-89)||(34828661-34828717)
chr6 (105-163)||(8507140-8507198)
chr6 (25-78)||(1534320-1534373)
chr6 (125-170)||(27432173-27432218)
chr6 (15-86)||(29986808-29986880)
[»] scaffold0009 (1 HSPs)
scaffold0009 (71-159)||(32330-32415)
[»] scaffold0020 (1 HSPs)
scaffold0020 (82-168)||(167836-167917)
[»] scaffold0061 (1 HSPs)
scaffold0061 (125-170)||(36207-36252)
[»] scaffold0017 (1 HSPs)
scaffold0017 (125-170)||(162527-162572)
[»] scaffold0003 (1 HSPs)
scaffold0003 (125-170)||(55145-55190)


Alignment Details
Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 31307077 - 31307216
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||| ||||||||   ||||||||||||||    
T  31307077 gagactaatccctcgagcattgtgggacccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggc---tggattcgaaccca 31307173  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
     ||||||  ||||||||||||||||||||||||||||||||||    
T  31307174 ggaccttggttaagctagaagagacccgttccatctcatctaa 31307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 45994652 - 45994503
Alignment:
Q  17 gagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    |||||||||| ||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||| ||||| ||||||||   |||||||||| |||    
T  45994652 gagactaatctctcgagcattgtgagacccaaatgggcgtcaggctctccctaagagttttaacgttgttgcatgcccaaggc---tggattcgaatcca 45994556  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||||||  ||||||||||||||||| ||||||||||||||||||||| ||||    
T  45994555 ggaccttggttaagctagaagagacctgttccatctcatctaaacgctcttgg 45994503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 14854738 - 14854586
Alignment:
Q  14 gcagagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaac 112  Q
    |||||||||||||| ||||| ||||| ||||||||||| |||||| ||||||||||| |||||||||| |||||||| ||||||||   |||||||||||    
T  14854738 gcagagactaatccctcgagaattgttggacccaaatgggcggcaagctctccctaagagttttaacgatgctgcatgcccaaggc---tggattcgaac 14854642  T
Q  113 ccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    |||  |||||  ||||||||||||||| |||||||||||||||||| |||| ||||    
T  14854641 ccagaaccttggttaagctagaagagaaccgttccatctcatctaagcgctcttgg 14854586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 38766219 - 38766075
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| |||||||||| |||||||||| |||||||| ||||||||   ||||||| ||||||    
T  38766219 gagactaatccctcgagcattgtgagacccaaatgggcggcagactctccctaagagttttaacgctgctgcatgcccaaggc---tggattcaaaccca 38766123  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgct 163  Q
     ||||||  |||||||||||||||| ||||||||||||||||| ||||    
T  38766122 ggaccttggttaagctagaagagactcgttccatctcatctaagcgct 38766075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 35972473 - 35972324
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| |||| ||| |||||||||||||| ||||||  |||||||||| |||||||||| ||||| || |||| |||||   ||||||||||||    
T  35972473 gagactaatccctcgaacatagtgggacccaaatgggcggcaaactctccctaatagttttaacgctgctgtatgcccatggctg---gattcgaaccca 35972377  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||||||  |||||||||||||| ||||||||||||||||||| |||| ||||    
T  35972376 agaccttggttaagctagaagaggcccgttccatctcatctaagcgctcttgg 35972324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 38844178 - 38844328
Alignment:
Q  16 agagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccc 114  Q
    ||||||||||| |||||||||||||||   |||||| ||||||| |||| ||||| |||||||||| || ||||| ||||| ||||   ||||||||| |    
T  38844178 agagactaatctctcgagcattgtgggggtcaaatgggcggcagactcttcctaagagttttaacgctgttgcatgcccaaagctg---gattcgaactc 38844274  T
Q  115 atgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    ||||||||  |||||||||||||||| ||||||||||||| ||| | |||||||    
T  38844275 atgaccttggttaagctagaagagactcgttccatctcatttaagcacttttgg 38844328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 46016267 - 46016154
Alignment:
Q  28 tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgacct---taa 124  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||| ||||||||||   |||||||||||| |||||   |      
T  46016267 tcgagcattgtgggacccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctg---gattcgaacccaggacctacttgg 46016171  T
Q  125 ttaagctagaagagacc 141  Q
    |||||||||||||||||    
T  46016170 ttaagctagaagagacc 46016154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 35334109 - 35334249
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| | ||||| |||| |||||||||  |||||||| |||||||||||   || |||||| |    
T  35334109 gagactaatccctcgagtattgtgggacccaaatgggcggcggactctctctaagagttttaactctgctgcatgcccaaggctga---atacgaaccaa 35334205  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaa 159  Q
      |||||  ||||||||||||||||  |||||||||||||||||    
T  35334206 gaaccttggttaagctagaagagacttgttccatctcatctaaa 35334249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 13686732 - 13686582
Alignment:
Q  17 gagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaa-agttttaacgttgctgcatacccaaggctgatggattcgaaccc 114  Q
    |||||||||| ||||||| ||||| ||||||||||  |||||  |||||||| || |||||||||| |||||||  |||||||   ||||||||||||||    
T  13686732 gagactaatctctcgagccttgtgagacccaaatggacggcaaactctcccttaagagttttaacgctgctgcacgcccaagg---atggattcgaaccc 13686636  T
Q  115 atgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    | ||||||  |||||| ||||||||||| | ||||||||||||| |||| ||||    
T  13686635 aggaccttggttaagcaagaagagacccatgccatctcatctaagcgctcttgg 13686582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 51626317 - 51626401
Alignment:
Q  17 gagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctg 100  Q
    |||||||||| |||||||| |||||||||||||||  |||||| ||||||||||||||||||||  |||||||| ||||||||||    
T  51626317 gagactaatctctcgagcactgtgggacccaaatggacggcagactctccctaaaagttttaacactgctgcatgcccaaggctg 51626401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 9012400 - 9012317
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggct 99  Q
    ||||||||||| |||||||||||||||||||| || |||||| ||||||||||| ||||| |||  |||||||| |||||||||    
T  9012400 gagactaatccctcgagcattgtgggacccaagtgggcggcaagctctccctaagagtttgaacactgctgcatgcccaaggct 9012317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 13948600 - 13948687
Alignment:
Q  14 gcagagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctg 100  Q
    |||||||||||||| |||||||||||| ||  ||||||  ||| || |||||||||| |||||||||  |||||||||||||||||||    
T  13948600 gcagagactaatccctcgagcattgtgagattcaaatggacggtagactctccctaagagttttaacactgctgcatacccaaggctg 13948687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 46250578 - 46250698
Alignment:
Q  28 tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgac---cttaa 124  Q
    |||||||| |||||||||||||| |||||||||| ||| ||| |||||||||  |||||||| |||||| |   |||||||||||| | |||   |||      
T  46250578 tcgagcatcgtgggacccaaatgggcggcaggctttccataagagttttaacactgctgcatgcccaagac---tggattcgaacctaggacctacttgg 46250674  T
Q  125 ttaagctagaagagacccgttcca 148  Q
    |||||||||||||| |||||||||    
T  46250675 ttaagctagaagagccccgttcca 46250698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 22189397 - 22189538
Alignment:
Q  15 cagagactaat-cctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacc 113  Q
    ||||||||||| |||||||| |||||||||||| ||  ||||||  |||| ||||| |||||||| |||||||||| | ||||   | |||||||||||     
T  22189397 cagagactaattcctcgagccttgtgggacccatataggcggcaatctctacctaagagttttaatgttgctgcatgcacaag---gttggattcgaact 22189493  T
Q  114 catgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    |  ||||||  |||||||||||||||| | |  ||||||||||||    
T  22189494 ctggaccttggttaagctagaagagactcatgtcatctcatctaa 22189538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 17135226 - 17135092
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| |||||  || |||||| |||||| ||||||  |||||||||| |||||||||| |||||||| | ||||||||   |||||||||  |    
T  17135226 gagactaatccctcgagtcttctgggactcaaatgcgcggcaaactctccctaagagttttaacgctgctgcatgcacaaggctg---gattcgaact-a 17135131  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcat 154  Q
     ||| || ||||||||||||||||| |||  ||||||||    
T  17135130 ggactttgattaagctagaagagacacgtgtcatctcat 17135092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 7096225 - 7096087
Alignment:
Q  18 agactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccat 116  Q
    ||||||||| || |||||||||  |||| ||||| |||| | ||||||||||| ||||||||| ||||||||||| |||| |   || |||| ||||||     
T  7096225 agactaatctcttgagcattgtaagacctaaatgggcggtaagctctccctaagagttttaactttgctgcatactcaagac---tgtattcaaacccaa 7096129  T
Q  117 gaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
     |||||  ||||||||||||| ||| ||  ||||||||||||    
T  7096128 aaccttggttaagctagaagaaacctgtgtcatctcatctaa 7096087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 33529387 - 33529325
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaa 78  Q
    ||||||||||| || || ||||||||||||||||| |||||| ||||||||||| ||||||||    
T  33529387 gagactaatccctccagtattgtgggacccaaatgggcggcaagctctccctaagagttttaa 33529325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 3649056 - 3649137
Alignment:
Q  16 agagactaatcct-cgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaag 96  Q
    ||||||||||||| ||||  ||||| || |||||||||||| |  |||||||||| ||||||||||||| ||||| ||||||    
T  3649056 agagactaatccttcgagtcttgtgcgatccaaatgagcggaaaactctccctaagagttttaacgttgttgcatgcccaag 3649137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 10199198 - 10199254
Alignment:
Q  102 tggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    ||||||||||| || ||||||  ||||| || |||||||||||||||||||||||||    
T  10199198 tggattcgaacacaagaccttggttaagttataagagacccgttccatctcatctaa 10199254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 25768768 - 25768812
Alignment:
Q  124 attaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||||    
T  25768768 attaaactagaagagacccgttccatctcatctaagcgctcttgg 25768812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 9455565 - 9455624
Alignment:
Q  18 agactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagtttt 76  Q
    ||||||||| ||||||||||||||||| |||||||| |||| ||||| ||||| ||||||    
T  9455565 agactaatctctcgagcattgtgggactcaaatgagtggcaagctcttcctaagagtttt 9455624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 42615839 - 42615793
Alignment:
Q  124 attaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    ||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  42615839 attaagctagaagagactcgtgtcatctcatctaaacgctcttggat 42615793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 18069340 - 18069385
Alignment:
Q  125 ttaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    |||||||||||||||| |||  ||||||||||||||||| ||||||    
T  18069340 ttaagctagaagagactcgtgtcatctcatctaaacgctcttggat 18069385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 11140540 - 11140469
Alignment:
Q  63 tccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaaga 137  Q
    ||||||| |||||||| | |||||||| ||||||||||   |||||||| ||| ||||||  |||||||||||||    
T  11140540 tccctaagagttttaaagctgctgcatgcccaaggctg---gattcgaaaccaggaccttggttaagctagaaga 11140469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 31308410 - 31308342
Alignment:
Q  33 cattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctga 101  Q
    |||||||||||| ||||   |||||| |||| ||||| ||||||||||||  ||||||||||| |||||    
T  31308410 cattgtgggacctaaatagacggcagactcttcctaagagttttaacgttattgcatacccaatgctga 31308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 47023535 - 47023459
Alignment:
Q  14 gcagagactaatcct-cgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcat 89  Q
    ||||||||||||||| ||||  ||||||||||||||||  || ||  |||||||||| ||||||||| ||| |||||    
T  47023535 gcagagactaatccttcgagtcttgtgggacccaaatggacgacaaactctccctaagagttttaactttgttgcat 47023459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 29059935 - 29059796
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||| ||||||||   ||||||||||||||    
T  29059935 gagactaatccctcaagcattgtgggacccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggc---tggattcgaaccca 29059839  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
     ||||||  ||||||||||||||||||||||||||||||||||    
T  29059838 ggaccttggttaagctagaagagacccgttccatctcatctaa 29059796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 31492233 - 31492097
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||||||||  |||||||| ||||||||   ||||||||||||||    
T  31492233 gagactaatccctcgagcattgtgggacctaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggc---tggattcgaaccca 31492137  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatc 155  Q
     ||||||  |||||||||||||||||||||||||||||||    
T  31492136 ggaccttggttaagctagaagagacccgttccatctcatc 31492097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 13254122 - 13254261
Alignment:
Q  26 cctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaat 125  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||| |||||||| || |||||   ||||||||||| || ||||||  |    
T  13254122 cctcgagcattgtgggacctaaatgggcggcaggctctccctaagagtttcaacgctgctgcatgcctaaggc---tggattcgaactcaggaccttggt 13254218  T
Q  126 taagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  13254219 taagctagaagagacccgttccatctcatctaagcgctcttgg 13254261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 28537496 - 28537371
Alignment:
Q  40 ggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagaga 139  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||   ||||||||||||||  ||||| |||||| |||||||||    
T  28537496 ggacccaaatgggcggcaggctctccctaagagttttaacgttgttgcatgcccaaggc---tggattcgaacccaaaaccttgattaagttagaagaga 28537400  T
Q  140 cccgttccatctcatctaaacgcttttgg 168  Q
    ||||||||||||||||||| |||| ||||    
T  28537399 cccgttccatctcatctaagcgctcttgg 28537371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 19477261 - 19477409
Alignment:
Q  17 gagactaatcctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccat 116  Q
    |||||||||||   ||||||||||||||||||||  ||||| ||||||||||| |||||||||  || ||||| ||||||||||   ||||| ||||||     
T  19477261 gagactaatccctcagcattgtgggacccaaatggccggcaagctctccctaagagttttaacactgttgcatgcccaaggctg---gattcaaacccag 19477357  T
Q  117 gaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     |||||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  19477358 aaccttggttaagctagaagagacccgttccatctcatctaaacgctcttgg 19477409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 8839292 - 8839441
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||| ||||||||| | ||||  |||||||  ||||||||| |||||||||| |||||||| ||||||||||   ||||||||||||    
T  8839292 gagactaatccctcgagtattgtgggatctaaataggcggcagattctccctaagagttttaacgctgctgcatgcccaaggctg---gattcgaaccca 8839388  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||||||  ||||||||||||||||||||| |||||||||||| |||| ||||    
T  8839389 ggaccttggttaagctagaagagacccgtttcatctcatctaagcgctcttgg 8839441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 21747052 - 21747199
Alignment:
Q  18 agactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccat 116  Q
    |||||||||| ||||| ||||||||||||||||| | || ||||||||||||| |||||||||| ||| |||| || || ||||   ||||||| ||||     
T  21747052 agactaatccctcgaggattgtgggacccaaatgggtggtaggctctccctaagagttttaacgctgcagcatgcctaaagctg---gattcga-cccag 21747147  T
Q  117 gaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    ||||||  ||||| ||||||||||||||||||||||||||||||||| ||||    
T  21747148 gaccttggttaagttagaagagacccgttccatctcatctaaacgctcttgg 21747199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 40099302 - 40099427
Alignment:
Q  35 ttgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctaga 134  Q
    ||||||||| |||||| |||||| ||||||||||| |||||||| | ||||||||| |||| ||||   ||||||||  || || |||| ||||||||||    
T  40099302 ttgtgggactcaaatgggcggcaagctctccctaagagttttaatgctgctgcatatccaaagctg---gattcgaattcaggatcttagttaagctaga 40099398  T
Q  135 agagacccgttccatctcatctaaacgct 163  Q
    |||||||||||||||||||||||| ||||    
T  40099399 agagacccgttccatctcatctaagcgct 40099427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 2657887 - 2657998
Alignment:
Q  56 caggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatc 155  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||||    ||| |||| || | |||| |||||| |||||||||| ||||||||||||||    
T  2657887 caggctctccttaagagttttaacgttgctgcatgcccaaggctgt---atttgaactcagggccttgattaagttagaagagactcgttccatctcatc 2657983  T
Q  156 taaacgcttttggat 170  Q
    ||| |||| ||||||    
T  2657984 taagcgctcttggat 2657998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 46373802 - 46373664
Alignment:
Q  18 agactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccat 116  Q
    ||||||||| ||||||||||||| |||||||||  |||||| ||||||||||  |||||||||| || || || |||||| |   ||||||||||||||     
T  46373802 agactaatctctcgagcattgtgtgacccaaataggcggcaagctctccctacgagttttaacgatgttgtatgcccaagac---tggattcgaacccag 46373706  T
Q  117 gaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    || |||  |||||||||||||||||||   ||||||||||||    
T  46373705 gatcttgcttaagctagaagagacccgcgtcatctcatctaa 46373664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 168
Target Start/End: Original strand, 7265336 - 7265473
Alignment:
Q  28 tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaatta 127  Q
    ||||| |||||||||||||||||||| |||  |||||||||| ||||||||| | ||||||| |||||| |   | ||| ||||||||  || ||  |||    
T  7265336 tcgagtattgtgggacccaaatgagcagcaaactctccctaagagttttaacatcgctgcatgcccaagac---tagatccgaacccaaaactttggtta 7265432  T
Q  128 agctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    |||||||||||||||||  |||||||| |||||||| ||||    
T  7265433 agctagaagagacccgtgtcatctcatataaacgctcttgg 7265473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 14545070 - 14544999
Alignment:
Q  20 actaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcata 90  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||    
T  14545070 actaatccatcgagcattgtgggacccaaatggacggcaggctctccctaagagttttaacactgctgcata 14544999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 32469955 - 32469911
Alignment:
Q  124 attaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  32469955 attaagctagaagagactcgttccatctcatctaaacgcttttgg 32469911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 20207627 - 20207542
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctga 101  Q
    ||||||||||| ||||||||||| ||| ||||||| |||||| ||||||| ||| ||||||||||||| | ||| || ||||||||    
T  20207627 gagactaatccctcgagcattgtaggatccaaatgcgcggcaagctctccttaagagttttaacgttgttacatgcctaaggctga 20207542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 7190415 - 7190521
Alignment:
Q  61 tctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaac 160  Q
    |||||||||||||||||||   ||||||| ||||| |||||   |||| ||| ||| |||||  |||||||||||||||    |||||||||||||||||    
T  7190415 tctccctaaaagttttaacacggctgcatgcccaatgctga---attcaaactcataaccttggttaagctagaagagatttattccatctcatctaaac 7190511  T
Q  161 gcttttggat 170  Q
    ||| ||||||    
T  7190512 gctcttggat 7190521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 35707979 - 35707828
Alignment:
Q  14 gcagagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaac 112  Q
    |||||||||||||| ||||||||||| ||| | ||||| | |||| | ||||||||| | ||||||||||| |||||  ||||    | ||||||||||     
T  35707979 gcagagactaatccctcgagcattgtaggatctaaatgggaggcaagttctccctaagaattttaacgttgttgcatgtccaa---agttggattcgaa- 35707884  T
Q  113 ccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    |||  |||||  |||| |||||||||||| |||| |||| ||||||||||| ||||    
T  35707883 ccagaaccttggttaaactagaagagacctgttcaatctaatctaaacgctcttgg 35707828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 42741929 - 42741974
Alignment:
Q  125 ttaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  42741929 ttaagatagaagagacctgttccatctcatctaaacgctcttggat 42741974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 5319274 - 5319210
Alignment:
Q  106 ttcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    |||||||||| |||||||||||| |||||||| |  |||   |||||||||||||||||||||||    
T  5319274 ttcgaacccaggaccttaattaaactagaagataatcgtataatctcatctaaacgcttttggat 5319210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 24172338 - 24172236
Alignment:
Q  18 agactaatcct-cgagcattgtgggacccaaatgagcggcaggctctcccta--aaagttttaacgttgctgcatacccaaggctgatggattcgaaccc 114  Q
    ||||||||||| |||||||||||||| |||| || |||||| |||||| |||  | ||||||||||||| ||||| ||||||   | |||||||||||||    
T  24172338 agactaatccttcgagcattgtgggatccaagtgggcggcaagctctcactaagagagttttaacgttgttgcatgcccaag---gttggattcgaaccc 24172242  T
Q  115 atgacc 120  Q
    | ||||    
T  24172241 aggacc 24172236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 40212039 - 40211965
Alignment:
Q  60 ctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaaga 137  Q
    |||| ||||| ||||||||||||| ||||| |||||| |||   |||| |||||||||||||| ||||||||| ||||    
T  40212039 ctcttcctaagagttttaacgttgttgcatgcccaagactg---gatttgaacccatgaccttgattaagctaaaaga 40211965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 11486754 - 11486839
Alignment:
Q  16 agagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctg 100  Q
    ||||||||||| || ||||||||||| ||||||||| |||||| ||||| | ||| |||||||||   | ||||| ||||||||||    
T  11486754 agagactaatctcttgagcattgtggaacccaaatgggcggcaagctcttcttaagagttttaacacagatgcatgcccaaggctg 11486839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 4125035 - 4125174
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||| ||||||||   | ||||||||||||    
T  4125035 gagactaatccctcgagcattgtgggacccaaatgggcggcaggctctccctaagagttttaacagtgctgcatgcccaaggc---ttgattcgaaccca 4125131  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
     ||| ||  ||||||||||||||||||||||||||||||||||    
T  4125132 ggacattggttaagctagaagagacccgttccatctcatctaa 4125174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 2744063 - 2743914
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| |||||||||||||||||||||||  || || ||||||||||| |||||||||  |||||||| ||||||||||   ||||||||||||    
T  2744063 gagactaatccctcgagcattgtgggacccaaatggacgacatgctctccctaagagttttaacactgctgcatgcccaaggctg---gattcgaaccca 2743967  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||||||  ||||||||||||||||||||||||||||||||||| ||| ||||    
T  2743966 ggaccttggttaagctagaagagacccgttccatctcatctaaatgctcttgg 2743914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 12958096 - 12958235
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||||| |||||||| |||||   || ||||||| ||||||    
T  12958096 gagactaatccctcgagcattgtgggacccaaatgggcgacaggctctccctaagagttttaacgctgctgcatgcccaa---tgctggattcaaaccca 12958192  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    |||||||  ||||||||||||||||  ||||||||||||||||    
T  12958193 tgaccttggttaagctagaagagactagttccatctcatctaa 12958235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 15683062 - 15682928
Alignment:
Q  14 gcagagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaac 112  Q
    ||||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||| |||||||||| |||||||| ||||||||   |||||||||||    
T  15683062 gcagagattaatccctcgagcattgtgggacctaaatgggcggcaggctctccctaagagttttaacgctgctgcatgcccaaggc---tggattcgaac 15682966  T
Q  113 ccatgaccttaattaagctagaagagacccgttccatc 150  Q
     || |||||| ||||||||||||||||| |||||||||    
T  15682965 tcaggaccttgattaagctagaagagactcgttccatc 15682928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 13468756 - 13468895
Alignment:
Q  17 gagactaatcct-cgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    |||||||||||| ||||||||||||||| |||||| ||||||| ||||| |||| |||||||||| |||| ||| ||||||||   ||||||||||||||    
T  13468756 gagactaatccttcgagcattgtgggactcaaatgggcggcagactctctctaagagttttaacgctgctacatgcccaaggc---tggattcgaaccca 13468852  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
     ||||||  ||||||||||||||||||||||||||| ||||||    
T  13468853 ggaccttggttaagctagaagagacccgttccatctaatctaa 13468895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 30936134 - 30935995
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| |||| |||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| |  |||||   ||||||||||| ||    
T  30936134 gagactaatccctcgaacattgtcggacccaaatgggcggcaggctctccctaagagttttaacgttgctgcatgcttaaggc---tggattcgaactca 30936038  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
     ||||||  ||||| ||||||||||||||||||||||||||||    
T  30936037 ggaccttggttaagttagaagagacccgttccatctcatctaa 30935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 19715747 - 19715881
Alignment:
Q  26 cctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaat 125  Q
    ||||||||||||||||||||||||| |||||| ||||||||| | |||||||||| |||||||| ||||||||   |||||||||||||| ||||||  |    
T  19715747 cctcgagcattgtgggacccaaatgggcggcaagctctccctgagagttttaacgctgctgcatgcccaaggc---tggattcgaacccaggaccttggt 19715843  T
Q  126 taagctagaagagacccgttccatctcatctaaacgct 163  Q
    |||||||||| ||||  |||||||||||||||| ||||    
T  19715844 taagctagaaaagacatgttccatctcatctaagcgct 19715881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 30056011 - 30056152
Alignment:
Q  16 agagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccc 114  Q
    |||||||||||| ||||||||||||| |||||||||  ||||||||||||||||| |||||||| | |||||||| || |||||   |||||| ||||||    
T  30056011 agagactaatccctcgagcattgtggaacccaaatggacggcaggctctccctaagagttttaatgctgctgcatgcctaaggc---tggatttgaaccc 30056107  T
Q  115 atgaccttaattaagctagaagagacccgttccatctcatctaaa 159  Q
    ||||||||  ||||||||||||||||  |||||||||||||||||    
T  30056108 atgaccttcgttaagctagaagagacatgttccatctcatctaaa 30056152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 36994508 - 36994660
Alignment:
Q  14 gcagagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaac 112  Q
    |||||||||||||| |||||| |||||||||||||||| || |||  |||||| ||| |||||||||| ||||||||  |||||||   |||||||||||    
T  36994508 gcagagactaatccctcgagccttgtgggacccaaatgggcagcaaactctccttaagagttttaacgctgctgcatgtccaaggc---tggattcgaac 36994604  T
Q  113 ccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    ||| ||||||  |||| |||||||||||  || |||||| |||||| |||| ||||    
T  36994605 ccaggaccttggttaaactagaagagacatgtgccatcttatctaagcgctcttgg 36994660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 7839264 - 7839343
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaa 95  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||||||| | |||||||| |||||    
T  7839264 gagactaatccctcgagcattgtgggacccaaatgggcggcatgctctccctaagagttttaaagctgctgcatgcccaa 7839343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 44705719 - 44705651
Alignment:
Q  102 tggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    |||||||||||||| ||||||  |||| |||||||||||| |||||||| |||||||||||| ||||||    
T  44705719 tggattcgaacccaagaccttggttaaactagaagagacctgttccatcccatctaaacgctcttggat 44705651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 8034142 - 8034213
Alignment:
Q  18 agactaatcctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcat 89  Q
    |||| |||| ||||| |||||||||||||||||  | ||| ||||||||||| ||||||||||||| |||||    
T  8034142 agaccaatcttcgagtattgtgggacccaaatggactgcaagctctccctaagagttttaacgttgttgcat 8034213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 35207114 - 35206991
Alignment:
Q  32 gcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagct 131  Q
    |||||||||||||||||||  || || ||| ||| ||| |||||||||| ||||||||  |||||| | |   |||||||||||  | |||  ||||| |    
T  35207114 gcattgtgggacccaaatggacgacatgctttccttaagagttttaacgctgctgcatgtccaaggttaa---attcgaacccagaatcttggttaagtt 35207018  T
Q  132 agaagagacccgttccatctcatctaa 158  Q
    |||||||||| ||| ||||||||||||    
T  35207017 agaagagacctgtttcatctcatctaa 35206991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 39086842 - 39086799
Alignment:
Q  125 ttaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||    
T  39086842 ttaagctagaagaggcccgttccatctcatctaagcgctcttgg 39086799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 44639095 - 44638992
Alignment:
Q  34 attgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctag 133  Q
    |||||||| | |||||| ||||||  |||||||||| ||||||||||||| ||||| | ||||   | ||||||| ||  || |||||| |||||| |||    
T  44639095 attgtggggctcaaatgtgcggcaaactctccctaagagttttaacgttgttgcatgctcaag---gttggattcaaattcaggaccttgattaagttag 44638999  T
Q  134 aagagac 140  Q
    |||||||    
T  44638998 aagagac 44638992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 12133259 - 12133390
Alignment:
Q  34 attgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctag 133  Q
    ||||| |||||||||||  ||||||||||||||||| |||||||||||||||||||  |||||||||   ||||||||||||||||||| ||||||||||    
T  12133259 attgtaggacccaaatggacggcaggctctccctaagagttttaacgttgctgcatgtccaaggctg---gattcgaacccatgaccttgattaagctag 12133355  T
Q  134 aagagacccgttccatctcatctaaacgcttttgg 168  Q
    ||||||| ||||||||||||||||| |||| ||||    
T  12133356 aagagactcgttccatctcatctaagcgctcttgg 12133390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 5394526 - 5394383
Alignment:
Q  17 gagactaatcct-cgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||| ||||||||   ||||||||||||||    
T  5394526 gagactaatcccacgagcattgtgggacccaaatgggcggcaggctctccctaagagttttaac-atgctgcatgcccaaggc---tggattcgaaccca 5394431  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgct 163  Q
     ||||||  |||||||||||||||| ||||||||||||||||| ||||    
T  5394430 ggaccttggttaagctagaagagactcgttccatctcatctaagcgct 5394383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 31579249 - 31579379
Alignment:
Q  25 tcctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaa 124  Q
    |||||||||||||||||||  ||||| ||||||| ||||||||||||||||||||  || ||||| ||||||||||   |||||||||||| |||||| |    
T  31579249 tcctcgagcattgtgggacttaaatgggcggcagactctccctaaaagttttaacactgttgcatgcccaaggctg---gattcgaacccaagaccttga 31579345  T
Q  125 ttaagctagaagagacccgttccatctcatctaa 158  Q
    ||||||||||||||||||||| ||||||||||||    
T  31579346 ttaagctagaagagacccgttacatctcatctaa 31579379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 42745127 - 42745276
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| |||| |||||||| ||||||||  || |||| |||||||||| ||||||||| ||||||||| ||||||||||   ||||||||||||    
T  42745127 gagactaatccctcgaccattgtggaacccaaataggcagcagactctccctaagagttttaacattgctgcatgcccaaggctg---gattcgaaccca 42745223  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||||||  |||||||| ||||||||||||||||||||||||| |||| ||||    
T  42745224 agaccttggttaagctataagagacccgttccatctcatctaagcgctcttgg 42745276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 18105373 - 18105517
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||| |||||| ||| |||||| |||||||||||||| ||| | ||||||||||| ||||| ||||||||   ||||||||||||||    
T  18105373 gagactaatccctcgagtattgtgagactcaaatgggcggcaggctctccataagaattttaacgttgttgcatgcccaaggc---tggattcgaaccca 18105469  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgct 163  Q
     ||||||  |||||||||||||||| ||||||||||||| ||| ||||    
T  18105470 ggaccttggttaagctagaagagactcgttccatctcatataagcgct 18105517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 44732620 - 44732723
Alignment:
Q  52 gcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatct 151  Q
    |||||||||||||||||| |||||||||  |||||||| ||||||||||   |||||||||||| ||||||  |||||||| ||||||||||||||||||    
T  44732620 gcggcaggctctccctaagagttttaacactgctgcatgcccaaggctg---gattcgaacccaggaccttggttaagctataagagacccgttccatct 44732716  T
Q  152 catctaa 158  Q
    |||||||    
T  44732717 catctaa 44732723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 9438157 - 9438296
Alignment:
Q  26 cctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaat 125  Q
    |||| ||||||||||||| |||||| |||||||| ||| ||||| |||||||||  |||||||| ||||||||   |||||||||||| | ||| ||  |    
T  9438157 cctcaagcattgtgggacacaaatgggcggcaggttcttcctaagagttttaaccctgctgcatgcccaaggc---tggattcgaaccaaagactttggt 9438253  T
Q  126 taagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    ||||||| ||||||  |||||||||||||||||||||| ||||    
T  9438254 taagctaaaagagattcgttccatctcatctaaacgctcttgg 9438296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 171
Target Start/End: Complemental strand, 7157601 - 7157476
Alignment:
Q  43 cccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagaccc 142  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||| ||||||||   | |||||||||| | || |||  ||||| |||||||||| |    
T  7157601 cccaaataggcggcaggctctccctaagagttttaacgttgctgcatgcccaaggc---tagattcgaacctaggatcttggttaagttagaagagactc 7157505  T
Q  143 gttccatctcatctaaacgcttttggatt 171  Q
    |||| ||| ||||||| |||| |||||||    
T  7157504 gttctatcccatctaagcgctattggatt 7157476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 17981627 - 17981479
Alignment:
Q  17 gagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    |||||||||| |||||||||||||||||||||||  |||||| ||||||||||| |||||||| |||| ||||| |||||| |   ||||||  ||  ||    
T  17981627 gagactaatctctcgagcattgtgggacccaaatt-gcggcaagctctccctaagagttttaatgttgttgcatgcccaagac---tggatttaaattca 17981532  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||| ||  |||||||||||||||| ||||||||||||||||| |||| ||||    
T  17981531 ggactttggttaagctagaagagactcgttccatctcatctaagcgctattgg 17981479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 7020371 - 7020521
Alignment:
Q  17 gagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    |||||||||| |||||||||||| ||||||||||| |||||| | ||||||||| | ||||||| ||||||||| || ||      || |||||||  ||    
T  7020371 gagactaatcactcgagcattgtaggacccaaatgggcggcaagttctccctaaga-ttttaacattgctgcatgcctaaat----tgaattcgaattca 7020465  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttggatt 171  Q
     ||||||  |||||||||||||||||||| | |||||||||||||||| |||||||    
T  7020466 agaccttggttaagctagaagagacccgtgcaatctcatctaaacgctcttggatt 7020521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 37568785 - 37568877
Alignment:
Q  63 tccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    ||||||| |||||||||  |||||||| || |||||||   |||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||    
T  37568785 tccctaagagttttaacactgctgcatgcctaaggctg---gattcgaacccaggaccttggttaagctagaagaaacccgttccatctcatctaa 37568877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 38743853 - 38743788
Alignment:
Q  31 agcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaag 96  Q
    ||||||||| || |||||||||||||| |||||||| |||||||||||||||||||||| ||||||    
T  38743853 agcattgtgagatccaaatgagcggcaagctctccccaaaagttttaacgttgctgcatgcccaag 38743788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 993865 - 993740
Alignment:
Q  34 attgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctag 133  Q
    ||||| ||||||||||| |||||| | ||||||||| ||||||| || |||||||| ||||||| |||   ||||||||||| ||||||  ||||||||     
T  993865 attgtaggacccaaatgggcggcaagttctccctaagagtttta-cgctgctgcatgcccaaggttga---attcgaacccaggaccttggttaagctat 993770  T
Q  134 aagagacccgttccatctcatctaaacgct 163  Q
    ||||||| |||  |||||||||||| ||||    
T  993769 aagagacacgtgtcatctcatctaagcgct 993740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 25423874 - 25423820
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaa 70  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||    
T  25423874 gagactaatccctcgagcattgtgggacccaaatgggcggcaggttctccctaaa 25423820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 14121894 - 14121966
Alignment:
Q  18 agactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcat 89  Q
    |||||||||| |||||||||||||||| |||||| |||||| | |||| |||| | |||||||||||||||||    
T  14121894 agactaatccctcgagcattgtgggactcaaatgggcggcaagttctctctaagaattttaacgttgctgcat 14121966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 33757097 - 33756968
Alignment:
Q  26 cctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaat 125  Q
    |||| ||||||||| ||  |||||||||| || ||||| ||||| |||||||||| |  || || | |||||||||   ||||||||  |  ||||| ||    
T  33757097 cctcaagcattgtgcgattcaaatgagcgacaagctcttcctaagagttttaacgctattgtatgctcaaggctga---attcgaactaagaaccttgat 33757001  T
Q  126 taagctagaagagacccgttccatctcatctaa 158  Q
    |||||||||||||||||||  ||||||||||||    
T  33757000 taagctagaagagacccgtgtcatctcatctaa 33756968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 39401093 - 39401222
Alignment:
Q  29 cgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaa 128  Q
    |||||||||||||||| |||||  || |  |||||||||||||||||||| | | |||||| |||||||||||   ||||||| ||| || |||  ||||    
T  39401093 cgagcattgtgggacctaaatggacgacgagctctccctaaaagttttaatgatactgcatgcccaaggctga---attcgaatccaagatcttggttaa 39401189  T
Q  129 gctagaagagacccgttccatctcatctaaacg 161  Q
    | || || |||| |||  |||||||||||||||    
T  39401190 gttaaaaaagactcgtgtcatctcatctaaacg 39401222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 28366013 - 28365930
Alignment:
Q  82 tgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    |||||||| ||||||||||    |||||||| || ||||||  ||||| |||||||||| ||||||||||||||||| |||| ||||    
T  28366013 tgctgcatgcccaaggctgc---attcgaactcacgaccttggttaagttagaagagacgcgttccatctcatctaagcgctcttgg 28365930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 17627675 - 17627545
Alignment:
Q  30 gagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaag 129  Q
    |||| ||||||||| |||||| || |||  || ||||||| | ||||||||||| ||||| ||||||||   ||||||||||| || ||||||  ||||     
T  17627675 gagccttgtgggactcaaatgggcagcaaactttccctaagaattttaacgttgttgcatgcccaaggc---tggattcgaactcaggaccttggttaaa 17627579  T
Q  130 ctagaagagacccgttccatctcatctaaacgct 163  Q
     |||||||||| |||  |||||| ||||| ||||    
T  17627578 ttagaagagacgcgtgtcatctcgtctaagcgct 17627545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 24359650 - 24359573
Alignment:
Q  60 ctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagac 140  Q
    ||||||||||||||||||| ||||||||||   ||||||   ||||||| |||| | |||||| |||||| ||||||||||    
T  24359650 ctctccctaaaagttttaatgttgctgcattatcaaggc---tggattcaaacctaggaccttgattaagttagaagagac 24359573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 17658578 - 17658509
Alignment:
Q  30 gagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggct 99  Q
    |||| ||||||||| |||||| || |||  |||||||||| | ||||||||||| ||||| |||||||||    
T  17658578 gagccttgtgggactcaaatgggcagcaaactctccctaagaattttaacgttgttgcatgcccaaggct 17658509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 44752205 - 44752285
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaag 96  Q
    ||||||||||| ||||| ||||| | ||||||||  | |||| |||||||| || ||||||||||||| ||||| ||||||    
T  44752205 gagactaatccctcgagtattgtagaacccaaattggtggcaagctctcccaaagagttttaacgttgttgcatgcccaag 44752285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 10592060 - 10591918
Alignment:
Q  14 gcagagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaac 112  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||| |||||||||  |||||||| ||||||||   |||||||||||    
T  10592060 gcagagactaatccctcgagcattgtgggactcaaatgggcggcagactctccctaagagttttaacactgctgcatgcccaaggc---tggattcgaac 10591964  T
Q  113 ccatgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    ||| ||||||  |||| |||||||||||||||||||||||||||||    
T  10591963 ccaggaccttggttaatctagaagagacccgttccatctcatctaa 10591918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 31113464 - 31113324
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||| ||||||||| ||||||| |||| ||||||||||||| |||||||||  |||||||| |||||||||||   ||||||||| |    
T  31113464 gagactaatccctcgagtattgtgggatccaaatgggcggtaggctctccctaagagttttaacactgctgcatgcccaaggctga---attcgaaccta 31113368  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaa 159  Q
      ||||||||||||||| || ||||||||| |||||||||||||    
T  31113367 gaaccttaattaagctaaaaaagacccgtttcatctcatctaaa 31113324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 18909313 - 18909453
Alignment:
Q  18 agactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccat 116  Q
    |||||||||| |||||||||||||||  |||||||||||||   ||||||||| |||||||||  |||||||||||||||||   |||||||||||| |     
T  18909313 agactaatccctcgagcattgtgggattcaaatgagcggcaaattctccctaagagttttaacactgctgcatacccaaggc---tggattcgaacctag 18909409  T
Q  117 gaccttaattaagctagaagagacccgttccatctcatctaaacgct 163  Q
    |||||| ||||||||||||   |||||||| ||||||||||| ||||    
T  18909410 gaccttgattaagctagaa---acccgttctatctcatctaagcgct 18909453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 5123509 - 5123594
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctga 101  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||| |||||||||||    
T  5123509 gagactaatccctcgagcattgtgggacccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctga 5123594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 30784997 - 30785146
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| | || ||||||| |||| |||||   |||||  ||||||||| |||||||||||||||||||  |||| ||||   ||||||||||||    
T  30784997 gagactaatcccttgaacattgtgagacctaaatggatggcagattctccctaagagttttaacgttgctgcatgtccaaagctg---gattcgaaccca 30785093  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||| || ||||||||||||||||| |||||||||||||||||| ||| ||||    
T  30785094 agacattgattaagctagaagagactcgttccatctcatctaaatgctcttgg 30785146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 2798323 - 2798464
Alignment:
Q  14 gcagagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaac 112  Q
    ||||||| ||||| || ||||||||| | | ||||||| |||| | |||||||||||||||||||||| |||||||| | ||||   | |||||||||||    
T  2798323 gcagagattaatctctagagcattgtagaaaccaaatgggcggtaagctctccctaaaagttttaacgctgctgcatgctcaag---gttggattcgaac 2798419  T
Q  113 ccatgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    |||  |||||  ||||||||||||| | ||||| ||||||||||||    
T  2798420 ccagaaccttggttaagctagaaga-aaccgtttcatctcatctaa 2798464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 2804490 - 2804631
Alignment:
Q  14 gcagagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaac 112  Q
    ||||||| ||||| || ||||||||| | | ||||||| |||| | |||||||||||||||||||||| |||||||| | ||||   | |||||||||||    
T  2804490 gcagagattaatctctagagcattgtagaaaccaaatgggcggtaagctctccctaaaagttttaacgctgctgcatgctcaag---gttggattcgaac 2804586  T
Q  113 ccatgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    |||  |||||  ||||||||||||| | ||||| ||||||||||||    
T  2804587 ccaaaaccttggttaagctagaaga-aaccgtttcatctcatctaa 2804631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 28023494 - 28023603
Alignment:
Q  56 caggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatc 155  Q
    ||||||||||||||||||||||||  | ||  || || |||||||   ||||||||| || ||| ||  ||||||||||||||| |||||||||||||||    
T  28023494 caggctctccctaaaagttttaacactactatatgcctaaggctg---gattcgaactcaggacattggttaagctagaagagatccgttccatctcatc 28023590  T
Q  156 taaacgcttttgg 168  Q
    ||| |||| ||||    
T  28023591 taagcgctcttgg 28023603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 22188009 - 22188146
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| || || ||||||||||||||||  ||||||| ||||||  || |||||||||| || || || ||||||||||   ||||| ||||||    
T  22188009 gagactaatccctctagtattgtgggacccaaataggcggcagactctcc--aagagttttaacgctgttgtatgcccaaggctg---gattcaaaccca 22188103  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
      |||||  ||||| |||||||||  ||||| |||||||||||    
T  22188104 ataccttggttaagttagaagagattcgttcaatctcatctaa 22188146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 36213016 - 36212963
Alignment:
Q  26 cctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaac 79  Q
    ||||||||||||||||||| ||||| ||||||  |||||||||| |||||||||    
T  36213016 cctcgagcattgtgggacctaaatgggcggcaaactctccctaagagttttaac 36212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 12682720 - 12682623
Alignment:
Q  61 tctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaac 160  Q
    |||||| || ||||||||||||| ||||| | ||||||||   ||||||||| ||  || ||  |||||||||||||||| |||| |||||||| |||||    
T  12682720 tctcccgaagagttttaacgttgttgcatgctcaaggctg---gattcgaactcagaacattgcttaagctagaagagactcgtttcatctcatttaaac 12682624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 26558016 - 26558057
Alignment:
Q  38 tgggacccaaatgagcggcaggctctccctaaaagttttaac 79  Q
    |||||| ||||||||||||| ||||| |||||||||||||||    
T  26558016 tgggactcaaatgagcggcaagctctacctaaaagttttaac 26558057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 12487303 - 12487351
Alignment:
Q  41 gacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcat 89  Q
    |||||||||| |||||| |||||||||||||||||| ||| || |||||    
T  12487303 gacccaaatgggcggcaagctctccctaaaagttttgacgatgttgcat 12487351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 26461 - 26332
Alignment:
Q  17 gagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    |||||||||| ||||| |||||||||||||||||| |||||||||||||||||| |||||||||  |||||||| ||||||||   ||||||||||||||    
T  26461 gagactaatctctcgaacattgtgggacccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggc---tggattcgaaccca 26365  T
Q  116 tgaccttaattaagctagaagagacccgttcca 148  Q
     ||||||  ||||||||||||||||||||||||    
T  26364 ggaccttggttaagctagaagagacccgttcca 26332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 30995976 - 30996125
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||| |||||||||| |||||||||| || ||||| ||||||   |  |||||||||||||    
T  30995976 gagactaatccctcgagcattgtgggacccagatgggcggcagactctccctaagagttttaacgctgttgcatgcccaag---gtcggattcgaaccca 30996072  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||||||  ||||| |||||||||||||||||||||||||||| |||| ||||    
T  30996073 ggaccttggttaagatagaagagacccgttccatctcatctaagcgctcttgg 30996125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 48204336 - 48204461
Alignment:
Q  30 gagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaag 129  Q
    ||||||||||| |||||||||  || || |||||||||||  |||||||||||||||||| ||||||||||   |||||||||||| ||||||  |||||    
T  48204336 gagcattgtggaacccaaatggacgacaagctctccctaagggttttaacgttgctgcatgcccaaggctg---gattcgaacccaagaccttggttaag 48204432  T
Q  130 ctagaagagacccgttccatctcatctaa 158  Q
    ||||||||||| |||||||||||||||||    
T  48204433 ctagaagagactcgttccatctcatctaa 48204461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 25224829 - 25224680
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| | ||||||||||||||| ||||| |||||| | ||||| ||| |||||||||| |||||||| |||||  ||    ||||||||||||    
T  25224829 gagactaatcccttgagcattgtgggacctaaatgggcggcaagttctccttaagagttttaacgctgctgcattcccaaaactt---gattcgaaccca 25224733  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||||||  ||||||||||||||||||||| |||||||||||| |||| ||||    
T  25224732 ggaccttggttaagctagaagagacccgtttcatctcatctaagcgctcttgg 25224680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 27763851 - 27763704
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| |||||||||||||||| ||||||  |||||| |||||||||| |||||||||  || || || ||||||||   ||||||||||||||    
T  27763851 gagactaatccctcgagcattgtgggactcaaatggacggcagactctccctaagagttttaacactgttgtatgcccaaggc---tggattcgaaccca 27763755  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||||||  |||||||||  ||||||||||| ||||||||||| |||| ||||    
T  27763754 ggaccttggttaagctag--gagacccgttctatctcatctaagcgctcttgg 27763704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 40294742 - 40294601
Alignment:
Q  17 gagactaatcct-cgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    |||||||||||| |||| |||||||||  ||||||||||||| ||| ||||||| ||||||||| ||| |||||| |||||||   ||||||||||| ||    
T  40294742 gagactaatccttcgagtattgtgggattcaaatgagcggcaagctttccctaagagttttaacattgttgcatatccaaggc---tggattcgaactca 40294646  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaac 160  Q
     |||||| |||||| |||| ||||| |||  ||||||||||||||    
T  40294645 ggaccttgattaaggtagaggagactcgtgtcatctcatctaaac 40294601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 20861378 - 20861294
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctg 100  Q
    ||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||| ||||    
T  20861378 gagactaatccctcgagcattatggaacccaaatgggcggcaggctctccctaagagttttaacgctgctgcatgcccaatgctg 20861294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 38331258 - 38331107
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| || | |||||||||||||||||| |||||| |||||| |||| |||||||||| |||||||| | |||    | ||||||| ||| ||    
T  38331258 gagactaatccctcaaacattgtgggacccaaatgggcggcaagctctctctaagagttttaacgctgctgcatgctcaa---agttggattcaaactca 38331162  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
     ||| ||  ||||| ||||||||||||| |||||||||||||| |||| ||||||    
T  38331161 ggacattggttaagttagaagagacccgatccatctcatctaagcgctcttggat 38331107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 48210980 - 48211099
Alignment:
Q  25 tcctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaa 124  Q
    |||||||| ||||||||||| ||||   ||||| ||||||| ||| ||||||||||||||||||| | ||||||   |||||||||||| |  ||||| |    
T  48210980 tcctcgagtattgtgggacctaaatagacggcaagctctccataagagttttaacgttgctgcatgctcaaggc---tggattcgaaccaaaaaccttga 48211076  T
Q  125 ttaagctagaagagacccgttcc 147  Q
    ||||| |||||||||||||||||    
T  48211077 ttaagttagaagagacccgttcc 48211099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 43621320 - 43621420
Alignment:
Q  15 cagagactaatcc-tcgagcatt-gtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaac 112  Q
    ||||||||||||| ||||||||| ||| |||  ||||| | |||| ||||||||||||||||||||||||||||||||||||| | |  |||||||||||    
T  43621320 cagagactaatccctcgagcatttgtgagacttaaatgggaggcaagctctccctaaaagttttaacgttgctgcatacccaaagtt--tggattcgaac 43621417  T
Q  113 cca 115  Q
    |||    
T  43621418 cca 43621420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 15283200 - 15283061
Alignment:
Q  18 agactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccat 116  Q
    ||||||||| |||||||||||||||||||||||| ||||||  || ||| ||| |||||||| | |||||||| |||| | |   |||||||||||||      
T  15283200 agactaatctctcgagcattgtgggacccaaatgggcggcaatctttccataagagttttaa-gatgctgcatgcccatgac---tggattcgaaccc-- 15283107  T
Q  117 gaccttaattaagctagaagagacccgttccatctcatctaaacgct 163  Q
     |||||| ||||| |||||||||| |||  |||||||||||||||||    
T  15283106 -accttagttaagttagaagagactcgtatcatctcatctaaacgct 15283061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 38088739 - 38088616
Alignment:
Q  42 acccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacc 141  Q
    ||||||||  |||||| | ||||||||| |||||||||| | |||||| ||||| ||||   ||||||||||    |||||  |||||||||||||||||    
T  38088739 acccaaataggcggcaagttctccctaagagttttaacgctactgcatgcccaaagctg---gattcgaacctggaaccttggttaagctagaagagacc 38088643  T
Q  142 cgttccatctcatctaaacgcttttgg 168  Q
    |||| |||||||||||| |||| ||||    
T  38088642 cgtttcatctcatctaagcgctcttgg 38088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 42514651 - 42514590
Alignment:
Q  102 tggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgct 163  Q
    |||||||||||||| ||| ||| |||||||||||||||| |||| |||||||||||| ||||    
T  42514651 tggattcgaacccaagactttagttaagctagaagagacacgtttcatctcatctaagcgct 42514590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 55123226 - 55123143
Alignment:
Q  18 agactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctg 100  Q
    |||||||||| |||||||||||| |||||||||| |  ||| ||||||||||| | |||||||| ||||||||  |||||||||    
T  55123226 agactaatccctcgagcattgtgagacccaaatgggtagcaagctctccctaagaattttaacgctgctgcatttccaaggctg 55123143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 39950342 - 39950269
Alignment:
Q  17 gagactaatcct-cgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcat 89  Q
    |||||||||||| |||||||||| ||| |||||||| || |||  ||||||||||| |||||||| ||||||||    
T  39950342 gagactaatccttcgagcattgtcggatccaaatgaacgacagattctccctaaaaattttaacgctgctgcat 39950269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 9651153 - 9651059
Alignment:
Q  43 cccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagac 140  Q
    ||||||||||| ||| |||||||||||   ||||||||||| |||||  ||||||||||   ||||||||||| |||| | |||||  ||||||||||    
T  9651153 cccaaatgagcagcaagctctccctaactattttaacgttgttgcatgtccaaggctga---attcgaacccaagaccatgattaaattagaagagac 9651059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 1642718 - 1642673
Alignment:
Q  34 attgtgggacccaaatgagcggcaggctctccctaaaagttttaac 79  Q
    |||||||||||||||||  ||| || ||||||||||||||||||||    
T  1642718 attgtgggacccaaatggacggtagactctccctaaaagttttaac 1642673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 46604657 - 46604722
Alignment:
Q  105 attcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    |||||||||||  |||||  ||||| || ||||||| ||||||||||||||||| |||| ||||||    
T  46604657 attcgaacccagaaccttggttaagttataagagactcgttccatctcatctaagcgctcttggat 46604722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 22022250 - 22022101
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||  ||||||||||||||||| | |||| | ||||||||| |||||||| | |||||||| ||||||||||   ||||||||||||    
T  22022250 gagactaatccctcgaatattgtgggacccaaatgggtggcaagttctccctaagagttttaatgctgctgcatgcccaaggctg---gattcgaaccca 22022154  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
      |||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  22022153 caaccttagttaagctagaagagacctgttccatctcatctaaacgctcttgg 22022101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 9781010 - 9781144
Alignment:
Q  26 cctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaat 125  Q
    ||||||||||||||||||||||||| ||||| | |||||||||| |||||||||| |||||||| ||||||||   ||||||||||| || |||||||||    
T  9781010 cctcgagcattgtgggacccaaatgggcggccgactctccctaagagttttaacgctgctgcatgcccaaggc---tggattcgaactcaagaccttaat 9781106  T
Q  126 taagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    |||     |||||| |||||| |||||||||||||||| ||||    
T  9781107 taa-----aagagatccgttctatctcatctaaacgctcttgg 9781144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 16756212 - 16756063
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| |||||||||||||||||||||||  || || ||||||||||| |||||||||| | |||||| ||||| |||||   |||| ||||||    
T  16756212 gagactaatccctcgagcattgtgggacccaaatgcacgacatgctctccctaagagttttaacgcttctgcatgcccaatgctga---attcaaaccca 16756116  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
      |||||  ||||||||||||||| |||||||||||||||||| |||| ||||    
T  16756115 gaaccttggttaagctagaagagatccgttccatctcatctaagcgctcttgg 16756063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 12035680 - 12035546
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaag-ttttaacgttgctgcatacccaaggctgatggattcgaaccc 114  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||| || |||||||  || ||||| || |||||   ||||||||||||     
T  12035680 gagactaatccctcgagcattgtgggacccaaatgggcggcagactctccctaagagtttttaacaatgttgcatgccaaaggc---tggattcgaacca 12035584  T
Q  115 atgaccttaattaagctagaagagacccgttccatctc 152  Q
    | ||| ||  |||| ||||||||||||| |||||||||    
T  12035583 aagactttggttaaactagaagagaccctttccatctc 12035546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 36806744 - 36806656
Alignment:
Q  14 gcagagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctga 101  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||| | |||||||| |||||||||| | ||| || |||||||||||    
T  36806744 gcagagactaatccctcgagcattgtggaacccaaatgggcggcagacactccctaagagttttaacgctactgtatgcccaaggctga 36806656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 17600564 - 17600658
Alignment:
Q  71 agttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    |||||||||| || ||||| | |||||||||   |||| |||||| ||||||  ||||||||||||||||||||  ||||||||||||||||||||||    
T  17600564 agttttaacgatgttgcatgctcaaggctga---attctaacccaagaccttggttaagctagaagagacccgtgtcatctcatctaaacgcttttgg 17600658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 29124825 - 29124727
Alignment:
Q  66 ctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttt 165  Q
    |||| |||||||||| |||||||| ||||| ||||   ||||||||| ||||||| |  |||||||||||||||| |||| ||||||||||||||| |||    
T  29124825 ctaagagttttaacgctgctgcatgcccaatgctg---gattcgaactcatgaccctggttaagctagaagagactcgtttcatctcatctaaacgtttt 29124729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 28724802 - 28724654
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| |||| |||||| |||| ||||||  |||||| |||| ||||| |||||||||  || |||||   |||||||||   ||||||| |||    
T  28724802 gagactaatccctcgaacattgtaggactcaaatggacggcagactcttcctaagagttttaacactgttgcatgttcaaggctga---attcgaatcca 28724706  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
     ||| ||| |||||||||||||||| ||||||||||||||||| |||| ||||    
T  28724705 ggacttta-ttaagctagaagagactcgttccatctcatctaagcgctcttgg 28724654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 40019327 - 40019232
Alignment:
Q  60 ctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    ||||||| || |||||||||||||||||||| ||||||||||   |||||||||||  ||||| |||||| |||||||||| |||  ||| ||||||||    
T  40019327 ctctccccaagagttttaacgttgctgcatatccaaggctga---attcgaacccaaaaccttgattaagttagaagagactcgtatcatttcatctaa 40019232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 52912668 - 52912600
Alignment:
Q  102 tggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    |||||||||||||| || |||  ||||||||  |||||||||||||||||||| |||||||||||||||    
T  52912668 tggattcgaacccaagatcttggttaagctaatagagacccgttccatctcatttaaacgcttttggat 52912600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 10841138 - 10840996
Alignment:
Q  26 cctcgagcattgtgggaccc-aaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaa 124  Q
    |||| ||||||||||||||| ||||| | |||| | ||||||||| | ||||||||||| | ||| |||||||||||   ||| |||||||  | |||      
T  10841138 cctcaagcattgtgggaccctaaatgggaggcaagttctccctaagaattttaacgttgttacatgcccaaggctga---atttgaacccaaaatcttgg 10841042  T
Q  125 ttaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    ||||| ||||||||||| ||| |||||||||||| |||| ||||||    
T  10841041 ttaagatagaagagacctgtttcatctcatctaagcgctcttggat 10840996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 42297453 - 42297523
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctg 86  Q
    ||||||||||| |||||||||||| ||||||||||  |||||| |||||||||| |||||||||| |||||    
T  42297453 gagactaatccctcgagcattgtgagacccaaatggacggcagactctccctaagagttttaacgctgctg 42297523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 44913242 - 44913180
Alignment:
Q  14 gcagagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttt 75  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||| ||||||||||| |||||    
T  44913242 gcagagactaatctctcgagcattgtgggacccagatgggcggcaagctctccctaagagttt 44913180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 45806323 - 45806222
Alignment:
Q  59 gctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    ||||||||||| ||||||||   |||||||| |||||| ||||   |||||||| || ||||||  ||||| |||||||||||||||| |||||||||||    
T  45806323 gctctccctaagagttttaaaactgctgcatgcccaagactga---attcgaactcaggaccttggttaagatagaagagacccgttctatctcatctaa 45806227  T
Q  159 acgct 163  Q
     ||||    
T  45806226 gcgct 45806222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 35692591 - 35692471
Alignment:
Q  40 ggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagaga 139  Q
    ||||| ||||||||||||  |||||||||| ||||||||||| | ||||| |||||   || ||||||||||| || ||| ||  |||| |||||| |||    
T  35692591 ggacctaaatgagcggcaaactctccctaagagttttaacgtcgttgcatgcccaa---tgttggattcgaactcaagacattggttaaactagaaaaga 35692495  T
Q  140 cccgttccatctcatctaaacgct 163  Q
    ||| | ||||||||||||| ||||    
T  35692494 cccatgccatctcatctaagcgct 35692471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 18428150 - 18428233
Alignment:
Q  14 gcagagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaagg 97  Q
    |||||||||||||| |||||||||||||| || |||||  | |||| ||||||||||||||||||||  |||||||| |||||||    
T  18428150 gcagagactaatccctcgagcattgtggggcc-aaatggacagcagactctccctaaaagttttaacactgctgcatgcccaagg 18428233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 36982441 - 36982344
Alignment:
Q  60 ctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaa 159  Q
    |||||||||| ||||||||||||| |||||  | ||||||||   ||||||||||  ||||||  |||| |||||||||||| ||  |||||||||||||    
T  36982441 ctctccctaagagttttaacgttgttgcatgtctaaggctga---attcgaacccgagaccttggttaaactagaagagacctgtgtcatctcatctaaa 36982345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 36522259 - 36522320
Alignment:
Q  28 tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcat 89  Q
    |||||||||||||||| ||||||  |||||  |||||||||| ||||||||| |||||||||    
T  36522259 tcgagcattgtgggactcaaatggacggcaaactctccctaagagttttaaccttgctgcat 36522320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 15642574 - 15642526
Alignment:
Q  27 ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttt 75  Q
    |||||||||||||||||||||||| ||||||  |||||||||| |||||    
T  15642574 ctcgagcattgtgggacccaaatgggcggcaaactctccctaagagttt 15642526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 33059756 - 33059808
Alignment:
Q  35 ttgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgc 87  Q
    |||||||||||||||| ||||||  |||||| ||| |||||||||||||||||    
T  33059756 ttgtgggacccaaatgggcggcaaactctccttaagagttttaacgttgctgc 33059808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 14500361 - 14500408
Alignment:
Q  111 acccatgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||||    
T  14500361 acccaggaccttggttaagctagaagagacccgttccatcgcatctaa 14500408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 49071707 - 49071665
Alignment:
Q  17 gagactaatc-ctcgagcattgtgggacccaaatgagcggcag 58  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  49071707 gagactaatctctcgagcattgtgggacccaaatgaacggcag 49071665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 32534201 - 32534071
Alignment:
Q  27 ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaatt 126  Q
    ||||||||||||| |||| || || |||| | |||||| |||| ||||||||||||| ||||| | ||| |||||   ||| ||| |||  |||||  ||    
T  32534201 ctcgagcattgtgagacctaa-tgggcggtaagctctctctaagagttttaacgttgttgcatgctcaaagctga---atttgaatccaaaaccttggtt 32534106  T
Q  127 aagctagaagagacccgttccatctcatctaaacg 161  Q
    ||||||||||| ||||||  ||| |||||||||||    
T  32534105 aagctagaagaaacccgtgtcatatcatctaaacg 32534071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 2e-29; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 21910334 - 21910186
Alignment:
Q  17 gagactaatcctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccat 116  Q
    |||||||||||  ||| ||||||||||| ||||||||||||| ||||| |||| |||||||||| || ||||| ||||||||   ||||||||||||||     
T  21910334 gagactaatccctgagtattgtgggacctaaatgagcggcagactctctctaagagttttaacgatgttgcatgcccaaggc---tggattcgaacccag 21910238  T
Q  117 gaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    || |||  ||||||||||||||||  ||| ||||||||||||||||| ||||    
T  21910237 gatcttggttaagctagaagagacttgtttcatctcatctaaacgctcttgg 21910186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 12411278 - 12411139
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| || |||||||||||||  ||||| ||||||| |||| ||||| |||||||||| |||||||| ||||||||   ||||||||||| ||    
T  12411278 gagactaatccctcaagcattgtgggacttaaatgggcggcagactcttcctaagagttttaacgctgctgcatgcccaaggc---tggattcgaactca 12411182  T
Q  116 tgaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
     ||||||  ||||| ||||||||||| ||||||||||||||||    
T  12411181 ggaccttggttaagttagaagagacctgttccatctcatctaa 12411139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 31412241 - 31412114
Alignment:
Q  27 ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaatt 126  Q
    |||||||||||||| ||||||||| ||||||| |||||||||| |||||||||  |||||||  ||||| |||||   ||||| | ||||||||||| ||    
T  31412241 ctcgagcattgtggaacccaaatgggcggcagactctccctaagagttttaacactgctgcacgcccaaagctga---attcg-atccatgaccttagtt 31412146  T
Q  127 aagctagaagagacccgttccatctcatctaa 158  Q
    || |||  ||||||||||||||||||||||||    
T  31412145 aaactatgagagacccgttccatctcatctaa 31412114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 12836908 - 12837004
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| || |||||||||||||||||||| |||||  ||||||||||| |||||||||| |||||||| || |||||   ||||||||||||||    
T  12836908 gagactaatccctcaagcattgtgggacccaaatgggcggcgagctctccctaagagttttaacgctgctgcatgcctaaggc---tggattcgaaccca 12837004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 423775 - 423641
Alignment:
Q  26 cctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaat 125  Q
    |||||||||||||||||| ||||||  ||||||  | || |||| |||||||||| ||| |||| ||||||||   ||||||| ||||||  |||||  |    
T  423775 cctcgagcattgtgggactcaaatggacggcagtttatctctaagagttttaacgctgcagcatgcccaaggc---tggattcaaacccaaaaccttggt 423679  T
Q  126 taagctagaagagacccgttccatctcatctaaacgct 163  Q
    ||| |||||||||| | |||||||||||||||| ||||    
T  423678 taaactagaagagatctgttccatctcatctaagcgct 423641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 15614593 - 15614735
Alignment:
Q  25 tcctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaa 124  Q
    |||| |||||||||||||| |||||  | || | | ||| || |||||||||||||||||| |||  ||||| ||||   ||||||||||||||| ||      
T  15614593 tcctagagcattgtgggactcaaataggtggtaagttcttccgaaaagttttaacgttgctacatgtccaagactga---attcgaacccatgacattgg 15614689  T
Q  125 ttaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    ||||| |||||||||| ||||||||||||| ||| |||| ||||||    
T  15614690 ttaagttagaagagactcgttccatctcatataagcgctcttggat 15614735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 28099373 - 28099251
Alignment:
Q  17 gagactaatcc-tcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaaccca 115  Q
    ||||||||||| ||||||||| ||| || ||||||  || ||   |||||||||||||||||||  |||||||| ||||||||||   ||||||||||||    
T  28099373 gagactaatccctcgagcattatggaactcaaatggacgacaaattctccctaaaagttttaacactgctgcatgcccaaggctg---gattcgaaccca 28099277  T
Q  116 tgaccttaattaagctagaagagacc 141  Q
     ||||||| ||||| |||||||||||    
T  28099276 ggaccttagttaaggtagaagagacc 28099251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 21029077 - 21029143
Alignment:
Q  102 tggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    |||||||||||||| ||||||  |||||||||||||||||||| ||||||||| |||||| ||||||    
T  21029077 tggattcgaacccaagaccttggttaagctagaagagacccgtgccatctcatataaacgattttgg 21029143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 31107502 - 31107655
Alignment:
Q  15 cagagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacc 113  Q
    |||||||||||| |||||  |||||||||  ||||||  ||| | |||||||| || |||||||||| || |||||  |||| ||||   |||||||||     
T  31107502 cagagactaatctctcgaatattgtgggaatcaaatggacggtaagctctcccaaagagttttaacgctgttgcatgtccaatgctg---gattcgaact 31107598  T
Q  114 catgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    ||  |||||| ||||| |||||||||||| || ||||||||||||||||| ||||||    
T  31107599 cagaaccttagttaagttagaagagacccatttcatctcatctaaacgctattggat 31107655  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 31489601 - 31489561
Alignment:
Q  60 ctctccctaaaagttttaacgttgctgcatacccaaggctg 100  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  31489601 ctctccctaaaagttttaacgttgctgcatacccaaagctg 31489561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 25084163 - 25084025
Alignment:
Q  18 agactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccat 116  Q
    ||||||||| |||||||||||||| ||  |||||   | || ||||||||||| ||||||||| |||||||||  ||||| ||||   |||||||| ||     
T  25084163 agactaatctctcgagcattgtggaacttaaatggatgacaagctctccctaagagttttaacattgctgcatgtccaagactga---attcgaactcaa 25084067  T
Q  117 gaccttaattaagctagaagagacccgttccatctcatctaa 158  Q
    ||| || |||||||||||||||||  ||  ||||||||||||    
T  25084066 gactttgattaagctagaagagacttgtgtcatctcatctaa 25084025  T

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Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 278502 - 278378
Alignment:
Q  35 ttgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctaga 134  Q
    |||||||||| |||||  |||||  |||||| ||| |||||||| || | ||||| ||||| ||||   ||||| ||| || ||||||| ||||||||||    
T  278502 ttgtgggacctaaatggacggcaaactctccataagagttttaatgt-gttgcatgcccaaagctg---gattcaaactcaagaccttagttaagctaga 278407  T
Q  135 agagacccgttccatctcatctaaacgct 163  Q
    |||||| |||  |||||||||||||||||    
T  278406 agagactcgtgtcatctcatctaaacgct 278378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 28933257 - 28933117
Alignment:
Q  27 ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaatt 126  Q
    |||||||||||||| ||||||||| ||||||  ||||| |||| | |||||||| || |||||  | ||||||||   |||| ||  || ||| ||| ||    
T  28933257 ctcgagcattgtggaacccaaatgggcggcaaactctctctaagaattttaacgatgttgcatgtctaaggctga---attcaaaatcaggactttagtt 28933161  T
Q  127 aagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    ||| || ||||||| | ||| |||||||||||||||| ||||||    
T  28933160 aagataaaagagactcattctatctcatctaaacgctcttggat 28933117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 34828661 - 34828717
Alignment:
Q  33 cattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctgcat 89  Q
    |||||||| || ||||||| |||||  |||||||||||||||||||||||| |||||    
T  34828661 cattgtggaactcaaatgaacggcaaactctccctaaaagttttaacgttgttgcat 34828717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 8507140 - 8507198
Alignment:
Q  105 attcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgct 163  Q
    |||||||||||  |||||||||||||||||||| | | ||  |||||||||||||||||    
T  8507140 attcgaacccaaaaccttaattaagctagaagaaatcggtgtcatctcatctaaacgct 8507198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 1534373 - 1534320
Alignment:
Q  25 tcctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaa 78  Q
    ||||||||||||||| ||| |||||| ||| || ||||||||||| ||||||||    
T  1534373 tcctcgagcattgtgcgactcaaatgggcgacaagctctccctaagagttttaa 1534320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 27432218 - 27432173
Alignment:
Q  125 ttaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    |||||||||||||||| |||  ||||||||||||||||| ||||||    
T  27432218 ttaagctagaagagactcgtgtcatctcatctaaacgctcttggat 27432173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 29986880 - 29986808
Alignment:
Q  15 cagagactaatc-ctcgagcattgtgggacccaaatgagcggcaggctctccctaaaagttttaacgttgctg 86  Q
    |||||| ||||| ||||||  ||||||||| |||||||||||||  ||||||  || ||||||||||||||||    
T  29986880 cagagattaatctctcgagttttgtgggactcaaatgagcggcaaactctcctaaagagttttaacgttgctg 29986808  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 32330 - 32415
Alignment:
Q  71 agttttaacgttgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaa 159  Q
    |||||||||| |||||||||||||||     ||||||||||||||  |||||  | ||||||||||||||||||||||||| |||||||    
T  32330 agttttaacgctgctgcatacccaag---attggattcgaacccagaaccttggtgaagctagaagagacccgttccatcttatctaaa 32415  T

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Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 167917 - 167836
Alignment:
Q  82 tgctgcatacccaaggctgatggattcgaacccatgaccttaattaagctagaagagacccgttccatctcatctaaacgcttttgg 168  Q
    |||||||| ||||||||||   |||| ||||||  |||||| |||||||||||||||||||||| |||||||||||| |||| ||||    
T  167917 tgctgcatgcccaaggctg---gatttgaaccc--gaccttgattaagctagaagagacccgtttcatctcatctaagcgctcttgg 167836  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 36252 - 36207
Alignment:
Q  125 ttaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    |||||||||||||||| |||  ||||||||||||||||| ||||||    
T  36252 ttaagctagaagagactcgtgtcatctcatctaaacgctcttggat 36207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 162527 - 162572
Alignment:
Q  125 ttaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    |||||||||||||||| |||  ||||||||||||||||| ||||||    
T  162527 ttaagctagaagagactcgtgtcatctcatctaaacgctcttggat 162572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 55145 - 55190
Alignment:
Q  125 ttaagctagaagagacccgttccatctcatctaaacgcttttggat 170  Q
    |||||||||||||||| |||  ||||||||||||||||| ||||||    
T  55145 ttaagctagaagagactcgtgtcatctcatctaaacgctcttggat 55190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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