View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10331_low_9 (Length: 203)

Name: NF10331_low_9
Description: NF10331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10331_low_9
NF10331_low_9
[»] chr8 (29 HSPs)
chr8 (1-203)||(13430551-13430753)
chr8 (1-203)||(21301048-21301249)
chr8 (1-194)||(33560157-33560349)
chr8 (5-203)||(1745190-1745387)
chr8 (1-203)||(21288429-21288630)
chr8 (1-203)||(43639809-43640010)
chr8 (1-202)||(6407752-6407951)
chr8 (5-203)||(14989375-14989572)
chr8 (1-203)||(36105221-36105431)
chr8 (1-203)||(40845303-40845512)
chr8 (1-203)||(15336003-15336213)
chr8 (1-203)||(15425068-15425278)
chr8 (1-203)||(15516372-15516582)
chr8 (5-203)||(18151580-18151767)
chr8 (1-203)||(22673804-22674014)
chr8 (1-203)||(24551300-24551510)
chr8 (1-203)||(22663142-22663352)
chr8 (1-203)||(17797448-17797658)
chr8 (1-203)||(23185141-23185351)
chr8 (88-202)||(3598262-3598375)
chr8 (152-203)||(43774053-43774104)
chr8 (122-195)||(21541101-21541175)
chr8 (1-178)||(45538379-45538564)
chr8 (1-58)||(9320594-9320652)
chr8 (1-55)||(16189010-16189064)
chr8 (1-55)||(16207332-16207386)
chr8 (1-55)||(18121180-18121234)
chr8 (1-58)||(24833124-24833182)
chr8 (149-198)||(23271056-23271105)
[»] chr5 (27 HSPs)
chr5 (1-203)||(35931911-35932113)
chr5 (8-203)||(35986138-35986331)
chr5 (1-202)||(10848803-10849003)
chr5 (1-203)||(28464246-28464446)
chr5 (1-203)||(3245339-3245548)
chr5 (1-194)||(9088999-9089190)
chr5 (1-203)||(21660242-21660443)
chr5 (5-190)||(25930075-25930259)
chr5 (1-203)||(11993918-11994128)
chr5 (1-203)||(15516999-15517209)
chr5 (1-203)||(26759179-26759389)
chr5 (118-203)||(30115773-30115857)
chr5 (1-203)||(4887052-4887262)
chr5 (1-203)||(29138305-29138513)
chr5 (1-203)||(30743010-30743220)
chr5 (148-203)||(23478539-23478594)
chr5 (57-203)||(42243776-42243921)
chr5 (1-73)||(23391637-23391710)
chr5 (1-55)||(26765528-26765582)
chr5 (5-55)||(30115890-30115940)
chr5 (1-54)||(28139637-28139690)
chr5 (140-203)||(5430061-5430124)
chr5 (1-59)||(33933297-33933356)
chr5 (1-55)||(7745746-7745800)
chr5 (1-55)||(32160796-32160850)
chr5 (122-203)||(32160926-32161007)
chr5 (138-203)||(33022839-33022904)
[»] chr1 (28 HSPs)
chr1 (1-203)||(21204768-21204970)
chr1 (1-203)||(21984629-21984830)
chr1 (1-203)||(21120909-21121111)
chr1 (1-203)||(21135005-21135207)
chr1 (1-203)||(46089022-46089223)
chr1 (1-203)||(42284661-42284861)
chr1 (1-198)||(37642281-37642477)
chr1 (1-202)||(10251019-10251218)
chr1 (1-203)||(21702847-21703056)
chr1 (1-202)||(48570070-48570278)
chr1 (1-194)||(30572230-30572430)
chr1 (1-202)||(25448402-25448613)
chr1 (1-203)||(44821382-44821592)
chr1 (1-135)||(23024821-23024953)
chr1 (135-198)||(21544188-21544251)
chr1 (1-135)||(19215645-19215778)
chr1 (148-203)||(19170187-19170242)
chr1 (138-203)||(22427194-22427259)
chr1 (1-203)||(35040199-35040409)
chr1 (122-203)||(2327276-2327356)
chr1 (138-203)||(22464645-22464710)
chr1 (1-55)||(22600175-22600229)
chr1 (1-55)||(29215830-29215884)
chr1 (1-55)||(36134223-36134277)
chr1 (122-195)||(7744935-7745007)
chr1 (122-203)||(17371188-17371269)
chr1 (1-54)||(39200986-39201039)
chr1 (147-203)||(26701964-26702020)
[»] chr6 (29 HSPs)
chr6 (1-203)||(19065932-19066133)
chr6 (5-203)||(26589638-26589837)
chr6 (1-203)||(22076312-22076522)
chr6 (1-172)||(12349027-12349205)
chr6 (1-203)||(21618278-21618488)
chr6 (1-198)||(16336161-16336366)
chr6 (1-203)||(33351834-33352041)
chr6 (1-135)||(17316507-17316640)
chr6 (1-202)||(19832938-19833148)
chr6 (135-203)||(22386962-22387030)
chr6 (88-203)||(16877343-16877457)
chr6 (1-67)||(19482786-19482852)
chr6 (1-96)||(12423295-12423399)
chr6 (135-203)||(17608228-17608296)
chr6 (1-203)||(15954737-15954947)
chr6 (138-203)||(21235292-21235357)
chr6 (3-55)||(20487979-20488031)
chr6 (148-203)||(21128399-21128454)
chr6 (1-55)||(22802175-22802229)
chr6 (1-74)||(19086192-19086264)
chr6 (1-53)||(16877247-16877299)
chr6 (1-41)||(17381555-17381595)
chr6 (122-203)||(20635866-20635951)
chr6 (148-203)||(18435747-18435802)
chr6 (148-203)||(20730609-20730664)
chr6 (1-55)||(21625135-21625189)
chr6 (1-55)||(32544299-32544353)
chr6 (138-203)||(16265055-16265120)
chr6 (138-203)||(22802320-22802385)
[»] chr3 (32 HSPs)
chr3 (1-203)||(40851001-40851202)
chr3 (1-203)||(21636595-21636796)
chr3 (1-202)||(21605580-21605780)
chr3 (1-203)||(46796293-46796493)
chr3 (1-202)||(1727942-1728141)
chr3 (1-202)||(21640900-21641108)
chr3 (5-203)||(30054142-30054339)
chr3 (1-203)||(49666331-49666531)
chr3 (1-203)||(14955460-14955670)
chr3 (1-203)||(2785097-2785308)
chr3 (1-135)||(9700029-9700162)
chr3 (122-198)||(15833550-15833626)
chr3 (1-199)||(24775452-24775660)
chr3 (1-172)||(22140797-22140976)
chr3 (135-198)||(10529503-10529566)
chr3 (1-194)||(20627356-20627557)
chr3 (1-178)||(53056668-53056853)
chr3 (60-172)||(5213677-5213788)
chr3 (148-203)||(2561378-2561433)
chr3 (1-55)||(11223596-11223650)
chr3 (1-55)||(29855442-29855496)
chr3 (1-55)||(45858821-45858875)
chr3 (140-203)||(11869248-11869311)
chr3 (1-55)||(11909096-11909150)
chr3 (122-184)||(13954205-13954267)
chr3 (1-55)||(14969360-14969414)
chr3 (1-58)||(33583262-33583320)
chr3 (1-55)||(47207739-47207793)
chr3 (1-58)||(50300256-50300314)
chr3 (123-203)||(46349760-46349839)
chr3 (139-195)||(47207886-47207942)
chr3 (135-195)||(51341179-51341239)
[»] chr4 (29 HSPs)
chr4 (1-203)||(22190874-22191076)
chr4 (9-202)||(40860703-40860895)
chr4 (1-203)||(17398557-17398757)
chr4 (1-198)||(15475030-15475226)
chr4 (1-198)||(9751427-9751623)
chr4 (1-203)||(39419617-39419817)
chr4 (1-197)||(38513906-38514102)
chr4 (1-203)||(6517513-6517723)
chr4 (1-203)||(10692879-10693089)
chr4 (1-203)||(10906645-10906855)
chr4 (1-172)||(3105324-3105502)
chr4 (102-203)||(14571162-14571262)
chr4 (1-135)||(20977485-20977618)
chr4 (1-135)||(27188588-27188721)
chr4 (1-203)||(413030-413240)
chr4 (1-98)||(16940044-16940150)
chr4 (81-203)||(17247360-17247481)
chr4 (1-135)||(3499600-3499735)
chr4 (1-194)||(54679958-54680157)
chr4 (138-202)||(3793296-3793360)
chr4 (1-55)||(25651133-25651187)
chr4 (1-55)||(37435564-37435618)
chr4 (47-135)||(17700748-17700835)
chr4 (57-189)||(55731872-55732003)
chr4 (4-55)||(3483752-3483803)
chr4 (148-203)||(19884886-19884941)
chr4 (1-55)||(19884730-19884784)
chr4 (1-51)||(29121398-29121448)
chr4 (138-194)||(13575996-13576052)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-203)||(34680-34881)
scaffold0056 (1-203)||(25541-25742)
[»] chr7 (31 HSPs)
chr7 (1-203)||(19339177-19339378)
chr7 (5-203)||(21381355-21381552)
chr7 (4-203)||(48062747-48062945)
chr7 (1-203)||(27871748-27871950)
chr7 (1-203)||(14425477-14425677)
chr7 (1-163)||(24794681-24794843)
chr7 (8-203)||(32264644-32264839)
chr7 (1-203)||(48805806-48806007)
chr7 (5-203)||(4411889-4412086)
chr7 (47-203)||(4429005-4429162)
chr7 (1-126)||(1293060-1293184)
chr7 (1-203)||(8182960-8183169)
chr7 (1-194)||(2265446-2265647)
chr7 (8-163)||(15704457-15704620)
chr7 (1-203)||(4821504-4821713)
chr7 (123-203)||(48236820-48236899)
chr7 (1-164)||(14426577-14426748)
chr7 (123-203)||(28622274-28622353)
chr7 (1-55)||(19711087-19711141)
chr7 (1-55)||(33605715-33605769)
chr7 (1-172)||(30944272-30944451)
chr7 (1-203)||(16542938-16543148)
chr7 (1-203)||(16622514-16622724)
chr7 (1-58)||(12174411-12174469)
chr7 (1-55)||(16111958-16112012)
chr7 (1-55)||(23280032-23280086)
chr7 (1-55)||(29935432-29935486)
chr7 (1-55)||(35952762-35952816)
chr7 (138-195)||(33605861-33605918)
chr7 (138-194)||(9709729-9709785)
chr7 (1-49)||(48236982-48237030)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-203)||(1632-1832)
scaffold1359 (1-164)||(561-732)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-203)||(697-898)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-203)||(7415-7616)
[»] chr2 (26 HSPs)
chr2 (1-202)||(40332115-40332315)
chr2 (1-202)||(28550791-28550990)
chr2 (1-203)||(31967915-31968115)
chr2 (1-202)||(22785528-22785727)
chr2 (1-199)||(1586908-1587105)
chr2 (1-172)||(22776191-22776360)
chr2 (1-172)||(22781569-22781738)
chr2 (1-172)||(23392570-23392740)
chr2 (1-172)||(44840462-44840630)
chr2 (1-203)||(3277058-3277259)
chr2 (1-126)||(14581543-14581667)
chr2 (1-203)||(34321798-34322008)
chr2 (88-203)||(31327827-31327942)
chr2 (88-203)||(31334548-31334663)
chr2 (60-203)||(33074322-33074464)
chr2 (5-203)||(35743864-35744068)
chr2 (1-203)||(45087044-45087256)
chr2 (1-164)||(22802488-22802659)
chr2 (1-55)||(28711716-28711770)
chr2 (1-199)||(20151900-20152107)
chr2 (140-203)||(30557181-30557244)
chr2 (1-55)||(28701247-28701301)
chr2 (2-58)||(6392662-6392719)
chr2 (138-203)||(6573984-6574049)
chr2 (1-53)||(19540444-19540496)
chr2 (3-55)||(22317623-22317675)
[»] scaffold0069 (1 HSPs)
scaffold0069 (9-194)||(5209-5393)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-163)||(87516-87677)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-203)||(17642-17842)
[»] scaffold0151 (1 HSPs)
scaffold0151 (45-202)||(11448-11604)
[»] scaffold0473 (1 HSPs)
scaffold0473 (45-203)||(2579-2735)
[»] scaffold0527 (2 HSPs)
scaffold0527 (1-203)||(7966-8175)
scaffold0527 (106-203)||(16-112)
[»] scaffold0217 (2 HSPs)
scaffold0217 (1-203)||(9594-9803)
scaffold0217 (1-203)||(21998-22208)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-203)||(3338-3548)
[»] scaffold0414 (1 HSPs)
scaffold0414 (1-203)||(7023-7233)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-203)||(60837-61047)
[»] scaffold0011 (3 HSPs)
scaffold0011 (57-203)||(65296-65440)
scaffold0011 (57-203)||(144341-144485)
scaffold0011 (1-55)||(164969-165023)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-203)||(9189-9398)
[»] scaffold0247 (2 HSPs)
scaffold0247 (80-202)||(23431-23551)
scaffold0247 (1-43)||(25434-25476)
[»] scaffold0005 (1 HSPs)
scaffold0005 (102-203)||(246114-246214)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-203)||(215364-215574)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-160)||(211434-211599)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-203)||(6607-6817)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-203)||(78233-78443)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-98)||(2702-2807)
[»] scaffold0570 (1 HSPs)
scaffold0570 (135-198)||(1550-1613)
[»] scaffold0177 (1 HSPs)
scaffold0177 (135-198)||(20265-20328)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-73)||(758-831)
[»] scaffold0003 (1 HSPs)
scaffold0003 (138-203)||(89922-89987)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-203)||(5466-5679)
[»] scaffold0050 (1 HSPs)
scaffold0050 (148-203)||(35406-35461)
[»] scaffold0422 (1 HSPs)
scaffold0422 (135-203)||(11921-11989)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-203)||(99075-99282)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-55)||(368-422)
[»] scaffold0207 (2 HSPs)
scaffold0207 (21-203)||(10774-10954)
scaffold0207 (45-203)||(20699-20855)
[»] scaffold0132 (2 HSPs)
scaffold0132 (134-195)||(37959-38020)
scaffold0132 (1-55)||(38108-38162)
[»] scaffold1331 (1 HSPs)
scaffold1331 (1-171)||(1598-1776)
[»] scaffold0022 (2 HSPs)
scaffold0022 (148-203)||(39616-39671)
scaffold0022 (148-203)||(137676-137731)
[»] scaffold0771 (1 HSPs)
scaffold0771 (122-184)||(6293-6355)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-55)||(1820-1874)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-55)||(103606-103660)


Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 13430753 - 13430551
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13430753 acacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcgtttcaaaatagccgttgtcatacttttctaatcttctgcaattt 13430654  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13430653 ctaggcgagttagagtccttgaaacagcttttgaaaactttaagttccatctcctgatgaactgtagcttctggtgatacacagcttctgatgaacttgc 13430554  T
Q  201 ttc 203  Q
    |||    
T  13430553 ttc 13430551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21301048 - 21301249
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||| ||||||||||||||||| |||||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  21301048 acactttgtacaaacgtactatgtcaacgctctttgaggagtaagcatccaatgcatttcaaaatagccgttgccatacttttccaatcttctgcaatct 21301147  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||||||||| |||||||| |||||| ||||||| ||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  21301148 ttaggcgagttagagtcattgaaacagcttttg-aaactttgagttcaatttcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgc 21301246  T
Q  201 ttc 203  Q
    |||    
T  21301247 ttc 21301249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 33560349 - 33560157
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||  ||||||||||| ||||||| |||||||||||| ||| ||||| ||||||| |||||    
T  33560349 acacttcgtacaaacgtattatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagccgttgccacactcttccagtcttctgtaattt 33560250  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatga 194  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||||| |||||||| ||||||||||||    
T  33560249 ctaggcgagttagagtccttgaaacaacttttgaaaac-ttgagttccatctcttgatgaactgcagcttctggtgatacatagcttctgatga 33560157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 1745190 - 1745387
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctag 104  Q
    |||||||| ||||||||||| ||||| |||||||| ||  ||||||||||| ||||||| |||||||||||| ||| ||| | ||||||| |||||||||    
T  1745190 ttcgtacagacgtactatgtcaacgcactttgaagtattagcatccaatgcatttcaaactagccgttgccacactcttctagtcttctgtaatttctag 1745289  T
Q  105 gcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  1745290 gcgagtaagagtccttgaaacaacttttgaaaac-ttgagttccatctcttgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttc 1745387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21288429 - 21288630
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||| ||||||| |||||||||||| || || ||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |    
T  21288429 acacttcgtacaaacgaactatgtcaacgctctttgaggagtaagcatccaatacatttcaaaatagccgttgccatacttttccagtcttctgcaatct 21288528  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     ||||||||||||||||  |||||||| ||||| || |||| ||||| || ||||||||||||| ||||| | |||||||||||||||||||||||||||    
T  21288529 ttaggcgagttagagtcaatgaaacaaattttg-aatctttgagttcaatttcctgatgaactgcagcttgtggtgatacacagcttctgatgaacttgc 21288627  T
Q  201 ttc 203  Q
    |||    
T  21288628 ttc 21288630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 43639809 - 43640010
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    ||||||||| ||||||||  |||| ||||||||||||| |||| |||| |||||| ||||||||||| ||||| |||||||||||| |||| ||||||||    
T  43639809 acacttcgtgcaaacgtaacatgtcaacgctctttgaaaaataagcattcaatgcctttcaaaatagtcgttgtcatacttttccagtcttttgcaattt 43639908  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||| || |||||||||||||||||| || ||||||||| |||||| |||||||||| | ||||| |||||||||||||||||||||  ||||    
T  43639909 ttaggcgagtttgaatccttgaaacaacttttg-aagctttaagttgcatctcatgatgaactgcatcttctggtgatacacagcttctgatgattttgc 43640007  T
Q  201 ttc 203  Q
    |||    
T  43640008 ttc 43640010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 6407752 - 6407951
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||  ||||||||||| || ||||||||||||||  ||||||||||| ||||||||||| |    
T  6407752 acacttcgtagaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatacttttccagtcttctgcaatct 6407851  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     ||| |||||| || ||||| ||||| |||||| || ||||||||| ||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||    
T  6407852 -tagacgagtttgaatcctttaaacagcttttg-aagctttaagttgcatctcctgatgaactgcagcttctggtgattcacaacttctgatgaacttgc 6407949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 14989572 - 14989375
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctag 104  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||| |||||||||  ||||||||||||||||| ||||| |  ||    
T  14989572 ttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttccaaattagccgttgttatacttttccaatcttcagcaatcttcag 14989473  T
Q  105 gcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
     |||||| || ||||| ||||  |||||| || ||||||||| |||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  14989472 acgagtttgaatcctttaaacggcttttg-aagctttaagttgcatctcctgatgaattgcagcttctggtgattcacagcttctgatgaacttgcttc 14989375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 36105221 - 36105431
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    |||||| ||||||||||||||| | ||||||||||||||||||  |||||||||| ||          ||||||||||||||  ||||||||||||||||    
T  36105221 acactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaaatagccgttgttatacttttccaatctt 36105320  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||| ||||||||  ||||||||| |||||||||||||||| |||||||| |||||   ||||||||||    
T  36105321 ctgcaatctttagacgagtttgaatccgttaaacagcttttgaag-ctttaagttgcatctcctgatgaactatagcttctggtgattttcagcttctga 36105419  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  36105420 taaacttgcttc 36105431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 40845512 - 40845303
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaa---------aatagccgttgccatacttttccaatctt 91  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||||||||| || |||         ||||| |||||| ||||||||||| ||||    
T  40845512 acacttcgtacaatcgtactatgtcaacgctctttgaagaataagcatccaatgccttccaatccttccaaaatagtcgttgctatacttttccagtctt 40845413  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||||| ||||||||||||||  ||||||| | |||||||||||||||| |||||||| ||||  |  |||||||||    
T  40845412 ctgcaatctttagacgagtttgaatcctt-aaacaacttttgaag-ctttaagctgcatctcctgatgaactatagcttctggtgagtcttagcttctga 40845315  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  40845314 taaacttgcttc 40845303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15336213 - 15336003
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||| ||         ||||||||| ||||||   |||||  || ||||    
T  15336213 acacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttctcagtctt 15336114  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||||||||||||  ||||||||| ||||||||||||||||  ||||||| ||||| | ||||||||||    
T  15336113 ctgcaatctttagacgagtttgattccattaaacaacttttgaag-ctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctga 15336015  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  15336014 taaacttgcttc 15336003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15425278 - 15425068
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||| ||         ||||||||| ||||||   |||||  || ||||    
T  15425278 acacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttctcagtctt 15425179  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||||||||||||  ||||||||| ||||||||||||||||  ||||||| ||||| | ||||||||||    
T  15425178 ctgcaatctttagacgagtttgattccattaaacaacttttgaag-ctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctga 15425080  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  15425079 taaacttgcttc 15425068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15516582 - 15516372
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||| ||         ||||||||| ||||||   |||||  || ||||    
T  15516582 acacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttctcagtctt 15516483  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||||||||||||  ||||||||| ||||||||||||||||  ||||||| ||||| | ||||||||||    
T  15516482 ctgcaatctttagacgagtttgattccattaaacaacttttgaag-ctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctga 15516384  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  15516383 taaacttgcttc 15516372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 18151767 - 18151580
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctag 104  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||| || |||| ||| |||||  ||||||||||| ||||||||||| |  ||    
T  18151767 ttcgtacaaacgtactatgtcaatgctctttgaagaataagcatccaatgccttccaaattagtcgttgttatacttttccagtcttctgcaatcttcag 18151668  T
Q  105 gcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
     |||||| || ||          |||||| || ||||||||| ||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  18151667 acgagtttgaatc----------cttttg-aagctttaagttgcatcttctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttc 18151580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22673804 - 22674014
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||         | || ||||||||  ||||| ||||||||| | ||||    
T  22673804 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatccttccaaaatagatgttgctatacttttctagtctt 22673903  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| || || |||||| || ||| | |||||||||||| || ||||||||| ||||||| ||||||||  | ||||| |||||   ||||||||||    
T  22673904 ctgcaatctccagacgagtttgaatccgttaaacaacttttg-aagctttaagttgcatctccggatgaactacaacttctggtgatcttcagcttctga 22674002  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  22674003 taaacttgcttc 22674014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 24551300 - 24551510
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||         | ||||||||||| ||||||   ||||||||| ||||    
T  24551300 acacttcgtacaaacgtactatgttaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcgttgcttcacttttccagtctt 24551399  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||| | || ||| | |||||||||||| || | ||||||| |||| | |||||||||| ||||||| |||||     ||||||||    
T  24551400 ctgcaatctttagacgaggttgaatccattaaacaacttttg-aagccttaagttgcatcccatgatgaactgcagcttctggtgatttttggcttctga 24551498  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  24551499 taaacttgcttc 24551510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22663142 - 22663352
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||         | || ||||||||  ||||| ||| ||||||| ||||    
T  22663142 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatctttccaaaatagttgttgctatatttttccagtctt 22663241  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| |  || |||||| || ||| | ||||| |||||| || ||||||||| |||||||| |||||||  | ||||| |||||   |||||||| |    
T  22663242 ctgcaatcttcagacgagtttgaatccgttaaacagcttttg-aagctttaagttgcatctcctaatgaactacaacttctagtgatcttcagcttctaa 22663340  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  22663341 taaacttgcttc 22663352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 17797448 - 17797658
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | ||||||||||| ||         ||||| ||||||||||   ||||||||| ||||    
T  17797448 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaattcctttcaaactagccgttgcatcacttttccagtctt 17797547  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||| |||   ||| |||| | || ||| |  ||||||||||||   ||||||||| ||||||||||||| ||| ||||||| |||||   ||||||||||    
T  17797548 ctgtaatggttagacgagattgaatccattgaacaacttttgagg-ctttaagttgcatctcctgatgagctgcagcttctggtgattttcagcttctga 17797646  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  17797647 tgaacttgcttc 17797658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 23185351 - 23185141
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||  ||||| ||| |||||||||||||||||| ||||||||||| ||         ||||| ||| ||||||   ||||||||| ||||    
T  23185351 acacttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtctt 23185252  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    |||||||   ||| |||| |  | ||| |  |||||| ||||||  ||||| ||| ||||||||||||||||| ||||||| |||||   ||||||||||    
T  23185251 ctgcaatgcttagacgagattaaatccattgaacaacctttgaag-ctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctga 23185153  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  23185152 tgaacttgcttc 23185141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 3598375 - 3598262
Alignment:
Q  88 tcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagctt 187  Q
    ||||||||||| | ||| |||||| || ||  | ||||||||||||||  ||||||||| ||||||||||||||||  | ||||| ||||| | ||||||    
T  3598375 tcttctgcaatctttagacgagtttgaatctgttaaacaacttttgaag-ctttaagttgcatctcctgatgaactacaacttctggtgattctcagctt 3598277  T
Q  188 ctgatgaacttgctt 202  Q
    |||||||||||||||    
T  3598276 ctgatgaacttgctt 3598262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 43774053 - 43774104
Alignment:
Q  152 tcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||  ||||||| |||||||| |||||||||||||||||||||    
T  43774053 tcctgatgaactacagcttctggtgatacatagcttctgatgaacttgcttc 43774104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 21541101 - 21541175
Alignment:
Q  122 aaacaacttttgaaaact-ttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaa 195  Q
    |||||||| || |||||| ||| ||| |||||||||||||||| ||| |||| |||||| |||||||||||||||    
T  21541101 aaacaactatttaaaactcttaggttgcatctcctgatgaactatagtttctggtgatatacagcttctgatgaa 21541175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 45538564 - 45538379
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||  | ||| |||||||||||||||| | ||||||||||         | |||||||||||  |||||   ||||||||| ||||    
T  45538564 acacttcgtacaaacgtgatttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaaatagttgttgcttcacttttccagtctt 45538465  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgat 178  Q
    ||||||| | ||| |||| | || ||| | |||||||||||| || | ||||||| |||| | |||||||||| ||||||| |||||    
T  45538464 ctgcaatctttagacgaggttgaatccattaaacaacttttg-aagccttaagttgcatcccatgatgaactgcagcttctggtgat 45538379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9320594 - 9320652
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctcttt-gaagaatatgcatccaatgcgtt 58  Q
    ||||||||||||||  |||| ||| |||||||||| |||||||| ||||||||||||||    
T  9320594 acacttcgtacaaatatactttgtcaacgctcttttgaagaataagcatccaatgcgtt 9320652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16189010 - 16189064
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| ||||||||| |||||||| |||||||||||    
T  16189010 acacttcgtacaattgtactttgtcaacgctcttagaagaataagcatccaatgc 16189064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16207332 - 16207386
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  16207332 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 16207386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18121234 - 18121180
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| |||||| ||||||||||||| | |||||||||||    
T  18121234 acacttcgtacaattgtactttgttaatgctctttgaagaacaagcatccaatgc 18121180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24833182 - 24833124
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctc-tttgaagaatatgcatccaatgcgtt 58  Q
    ||||||||||||||||||| |||| ||||||| ||||| ||| | ||||||||||||||    
T  24833182 acacttcgtacaaacgtaccatgtcaacgctcttttgaggaacaagcatccaatgcgtt 24833124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 23271105 - 23271056
Alignment:
Q  149 atctcctgatgaactgtagcttcttgtgatacacagcttctgatgaactt 198  Q
    |||| ||||| ||||||||||||| ||||| || ||||||||||||||||    
T  23271105 atcttctgatcaactgtagcttctggtgattcatagcttctgatgaactt 23271056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 7e-85; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 35932113 - 35931911
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  35932113 acacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcgtttcaaaatagtcgttgccatacttttccagtcttctgcaattt 35932014  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||| ||||||||||||| ||    
T  35932013 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccacctcttgatgaactgtaccttctggtgatacacaacttctgatgaactagc 35931914  T
Q  201 ttc 203  Q
    |||    
T  35931913 ttc 35931911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 35986331 - 35986138
Alignment:
Q  8 gtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcg 107  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  35986331 gtacagacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagtcgttgccacacttttccagtcttctgcaattt-taggcg 35986233  T
Q  108 agttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  35986232 agttagagtccttgaaacatcttttg-aaactttaagttcaatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttc 35986138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 10848803 - 10849003
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||| ||||||||||| ||||| |||||||||||||||||| ||||| ||||| |||||||||||| | ||||||||||||||| | |||||||||||    
T  10848803 acactttgtacaaacgtattatgtcaacgctctttgaagaataagcatctaatgcctttcaaaatagctgatgccatacttttccagttttctgcaattt 10848902  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||| || |||||||||||||||||| || ||||||||| |||||| |||||||||| ||||||| |||||||||||||| ||||||||||||    
T  10848903 ttaggcgagtttgaatccttgaaacaacttttg-aagctttaagttgcatctcatgatgaactgcagcttctggtgatacacagcttatgatgaacttgc 10849001  T
Q  201 tt 202  Q
    ||    
T  10849002 tt 10849003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 28464446 - 28464246
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||  | ||||||||||| |    
T  28464446 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgttatacttttttagtcttctgcaatct 28464347  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     ||| |||||| || ||||||||||| |||||| || |||||||||  |||||||||||||||| ||||||| ||||| ||||||||||||| |||||||    
T  28464346 -tagacgagtttgaatccttgaaacagcttttg-aagctttaagttgtatctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgc 28464249  T
Q  201 ttc 203  Q
    |||    
T  28464248 ttc 28464246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 3245548 - 3245339
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaa---------aatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||         |||||||||||| ||||||||||| ||||    
T  3245548 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcctttcaattctttcaaaatagccgttgctatacttttccagtctt 3245449  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || |||||||||||  ||||| || ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  3245448 ctgcaatct-tagacgagtttgaatccttgaaacag-ttttggaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctga 3245351  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  3245350 tgaacttgcttc 3245339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 9088999 - 9089190
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||||| || |||||||| |||||  ||||||||||| |||||| ||| |     
T  9088999 acacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttccaaaatagtcgttgtaatacttttccagtcttcttcaa-tc 9089097  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatga 194  Q
     ||| |||||| || ||||| ||||| |||||| |||||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  9089098 atagacgagtttgattcctttaaacagcttttg-aaactttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 9089190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21660242 - 21660443
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    ||||||||||||||| |||||||| |||| ||||||| || || ||||||||||| ||| |||||||  ||||||||||||||||  ||||||||||| |    
T  21660242 acacttcgtacaaacatactatgtcaacgatctttgaggactaagcatccaatgcatttgaaaatagttgttgccatacttttccggtcttctgcaatct 21660341  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     ||| ||||||||||||||||||||| |||||| ||||||| ||||| || |||  |||||||||||||||| |||||||| | |||||||||| || ||    
T  21660342 ttagacgagttagagtccttgaaacagcttttg-aaactttgagttcaatttccaaatgaactgtagcttctggtgatacataacttctgatgacctagc 21660440  T
Q  201 ttc 203  Q
    |||    
T  21660441 ttc 21660443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 25930259 - 25930075
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctag 104  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||  ||| |||||||||  ||||||||||| |||| |||||| | |||    
T  25930259 ttcgtacaaacgtactatgtcaacgctctttgaaaaataagcatccaatgccttctaaattagccgttgttatacttttccagtcttatgcaatctttag 25930160  T
Q  105 gcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctg 190  Q
     |||||| || ||||| |||||||||||| || ||||||||| |||||||||||||| || ||||||| ||||| |||||||||||    
T  25930159 acgagtttgaatcctttaaacaacttttg-aagctttaagttgcatctcctgatgaattgcagcttctggtgattcacagcttctg 25930075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11993918 - 11994128
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||| ||||||| ||| |||||||||||||||| | ||||||||||| ||         ||||| ||||||||||   ||| ||||| ||||    
T  11993918 acacttcgtacatacgtactttgtcaacgctctttgaagaacaagcatccaatgctttcaaatcccttcaaattagccgttgcttcactattccagtctt 11994017  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    |||||||   ||| |||||| || ||| |  |||| ||||||||| ||||||||| ||||||||||||||||  ||||||| ||||| ||||||||||||    
T  11994018 ctgcaatccttagacgagtttgaatccgttgaacatcttttgaaa-ctttaagttgcatctcctgatgaactacagcttctggtgattcacagcttctga 11994116  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  11994117 taaacttgcttc 11994128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15516999 - 15517209
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||| ||||||||  ||| |||||||||||||| ||||||||||| ||          ||||||||||||||| ||||||||||| ||||    
T  15516999 acacttcgtacaaaagtactatgccaacactctttgaagaataagcatccaatgccttcaaatccttccaaaatagccgttgctatacttttccagtctt 15517098  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| |  ||||||||||| || ||||||||| ||||| ||||||||||  | ||||| ||||| | || |||||||    
T  15517099 ctgcaatctttagacgagtttgaatccgttgaacaacttttg-aagctttaagttgcatcttctgatgaactacaacttctggtgattctcaacttctga 15517197  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  15517198 taaacttgcttc 15517209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 26759179 - 26759389
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    ||||||||||||||| |||||| | | |||||||||||||||| ||||||||||| ||          |||||||| |||||  ||||||||||| ||||    
T  26759179 acacttcgtacaaacttactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgttatacttttccagtctt 26759278  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||||||| || || ||| | |||||||||||| || ||||||||| ||||||||||||||||  | ||||| ||||| | ||||||||||    
T  26759279 ctgcaatctttaggcgaatttgaatccgttaaacaacttttg-aagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctga 26759377  T
Q  192 tgaacttgcttc 203  Q
    | || |||||||    
T  26759378 taaatttgcttc 26759389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 30115857 - 30115773
Alignment:
Q  118 cttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  30115857 cttgaaacaacttttgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttc 30115773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 4887052 - 4887262
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||| ||||||| ||| |||||||||||||||| | ||||||||||| ||         ||||||||| |||||| ||||||||||| ||||    
T  4887052 acacttcgtacacacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcgttgctatacttttccagtctt 4887151  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
     |||||| |  || | ||||  | ||| |  |||||||||||||  ||||||||| ||| || |||||||||| ||||||| ||||| | |||||||| |    
T  4887152 ttgcaatcttaagacaagtttaaatccattgaacaacttttgaag-ctttaagttgcatatcttgatgaactgcagcttctggtgattctcagcttctaa 4887250  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  4887251 tgaacttgcttc 4887262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 29138513 - 29138305
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||         | || ||||||||  ||||| |||| |||||| ||||    
T  29138513 acacttcgtacaaacgtactatgacaacgctctttgaagaataagcatccaatgccttctaatccttccaaaatagttgttgctatac-tttccagtctt 29138415  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| ||| || || ||  | ||||| |||||| |||||||||||| ||||||||||||||||  | ||||| ||||| | ||||||||||    
T  29138414 ctgcaatct-tagacgattttgaatctgttaaacagcttttg-aaactttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctga 29138317  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  29138316 taaacttgcttc 29138305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 30743010 - 30743220
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| ||||||||||||||||||  |||||||||         | ||||||||||  ||||||  | | |||||| ||||    
T  30743010 acacttcgtacaaacgtactttgtcaacgctctttgaagaataaacatccaatgccttcaaatcctttcaaaataatcgttgctttgcctttccagtctt 30743109  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | |||||||||||| || ||||||||| ||||||||||||||||| | ||||| || || | |||||| |||    
T  30743110 ctgcaatctttagacgagtttgaatccattaaacaacttttg-aagctttaagttgcatctcctgatgaactgcaacttctcgtaattctcagcttatga 30743208  T
Q  192 tgaacttgcttc 203  Q
    | || |||||||    
T  30743209 taaatttgcttc 30743220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 23478539 - 23478594
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  23478539 catcttctgatgaactgtagcttctggtgatatacagcttctgatgaacttgcttc 23478594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 42243776 - 42243921
Alignment:
Q  57 tttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctg 156  Q
    |||||||||||  |||||   ||||||||| ||||||||||||| ||| |||||| || ||| | ||||| |||||| || ||||||||| |||||||||    
T  42243776 tttcaaaatagttgttgcttcacttttccagtcttctgcaatttttagacgagtttgaatccgttaaacagcttttg-aagctttaagttgcatctcctg 42243874  T
Q  157 atgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||  ||||||| ||||| | ||| || |||| || |||||||    
T  42243875 atgaactacagcttctggtgattctcagtttttgataaatttgcttc 42243921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23391710 - 23391637
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc-gtttcaaaatagccgttg 73  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||| |||||||||||  |||||||||||||||||    
T  23391710 acacttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgctttttcaaaatagccgttg 23391637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26765528 - 26765582
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||||||||||| | | |||||||||||||||| |||||||||||    
T  26765528 acacttcgtacaaacgtactatttcagcgctctttgaagaataagcatccaatgc 26765582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 30115940 - 30115890
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  30115940 ttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgc 30115890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28139637 - 28139690
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg 54  Q
    ||||||||||||||| |||||||| |||||||| ||||||||| ||||||||||    
T  28139637 acacttcgtacaaacatactatgtcaacgctctatgaagaataagcatccaatg 28139690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 5430061 - 5430124
Alignment:
Q  140 ttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||| ||||||||||||||||| ||||||| |||||    | |||||||||||||||||||    
T  5430061 ttaagttgcatctcctgatgaactgcagcttctggtgatttttaccttctgatgaacttgcttc 5430124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33933297 - 33933356
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctc-tttgaagaatatgcatccaatgcgttt 59  Q
    |||||||||||||||||||||| | ||||||| ||||| ||| | |||||||||||||||    
T  33933297 acacttcgtacaaacgtactatatcaacgctcttttgaggaacaagcatccaatgcgttt 33933356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7745800 - 7745746
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  7745800 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 7745746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32160796 - 32160850
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||| |||| || ||| |||||||||||||| ||| |||||||||||    
T  32160796 acacttcgtacatacgttctttgtcaacgctctttgaaggataagcatccaatgc 32160850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 32160926 - 32161007
Alignment:
Q  122 aaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||| ||  |||||||| ||| ||||| ||||||||||  || |||| |||||| ||||||||||||  |||||||||    
T  32160926 aaacaactatttgaaactttaggttgcatcttctgatgaactacagtttctggtgatatacagcttctgatagacttgcttc 32161007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 33022839 - 33022904
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||| ||||||||||||||||| |  |||| |||||   ||||||||||||||||||||||    
T  33022839 ctttatgttgcatctcctgatgaactgcaaattctggtgattttcagcttctgatgaacttgcttc 33022904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 7e-85; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21204970 - 21204768
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  21204970 acacttcgtacaaacgtactatgtcaacgctctttgaagaattaacatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaattt 21204871  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||||    
T  21204870 ctaggcgagttagagtccttgaaacaacttttaaaaactttaagttccatctcttgatgaactgcagcttctggtgatacacaacttctgatgaacttgc 21204771  T
Q  201 ttc 203  Q
    |||    
T  21204770 ttc 21204768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21984629 - 21984830
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||| | ||||||||| |    
T  21984629 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagctgtttccatacttttccagtgttctgcaatat 21984728  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21984729 ctaggcgagttagagtccttgaaacaacttttg-acactttaagttccctctcctgatgaactgtagcttctggtgatacacagcttctgatgaacttgc 21984827  T
Q  201 ttc 203  Q
    |||    
T  21984828 ttc 21984830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21121111 - 21120909
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||||| |||||||||| ||||||| |||||||| ||||    
T  21121111 acacgtcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcagaatagtcgttgccatatttttccagtcttctgcgattt 21121012  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||    
T  21121011 ctaggtgagttagagtccttgaaacagcttttgaaaactttaagttccatctcctgatgaactgcagcttctggtgatacacagcttctgatgaatttgc 21120912  T
Q  201 ttc 203  Q
    |||    
T  21120911 ttc 21120909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21135207 - 21135005
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||| ||||||||| ||||||| ||||||| |||||    
T  21135207 acacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcatttcagaatagctgttgccatatttttccagtcttctgtaattt 21135108  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||||||||||||    
T  21135107 ctaggtgagttagattccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgcaacttctggtgatacacaacttctgatgaacttgc 21135008  T
Q  201 ttc 203  Q
    |||    
T  21135007 ttc 21135005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 46089022 - 46089223
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  46089022 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatacttttccagtcttctgcaattt 46089121  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||| || ||||||||||| |||||| || ||||||||| |||||| |||||||||| ||||||| |||||||||| ||| ||||||||||||    
T  46089122 ttaggcgagtttgaatccttgaaacagcttttg-aagctttaagttgcatctcatgatgaactgcagcttctggtgatacacaacttatgatgaacttgc 46089220  T
Q  201 ttc 203  Q
    |||    
T  46089221 ttc 46089223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 42284661 - 42284861
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||||||| || ||||| | ||||||| ||||||||||| |    
T  42284661 acacttcgtacaaacgtactatgtcaacgctctttgaagaaaaagcatccaatgcatttcaaaatagtcg-tgccacaattttccagtcttctgcaatct 42284759  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     ||||||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  42284760 ttaggcgagttagagtccttgaaacagcttttgaaaa-tttaagttcaatcttctgatgaactgcagcttctggtgatacacagcttctgatgaacttgc 42284858  T
Q  201 ttc 203  Q
    |||    
T  42284859 ttc 42284861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 37642281 - 37642477
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||  ||||||||||| ||||||| |||| ||||||| ||| ||||| ||||||| |||||    
T  37642281 acacttcgtataaacgtactatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagctgttgccacactcttccagtcttctgtaattt 37642380  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaactt 198  Q
    |||||||||||||||||||||||||| |||||| ||||||| ||||| || ||||||||||||| ||||||| |||||| | ||||||||||||||||    
T  37642381 ctaggcgagttagagtccttgaaacagcttttg-aaactttgagttcaatttcctgatgaactgcagcttctggtgatatatagcttctgatgaactt 37642477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 10251019 - 10251218
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||||||||| || |||| |||||||||  ||||||||||| ||||||||||| |    
T  10251019 acacttcgtacaaacgtactatgtcaaaactctttgaagaataagcatccaatgccttccaaattagccgttgttatacttttccagtcttctgcaatct 10251118  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     ||| |||||| || ||||| |||||||||||| || ||||||||| ||||||||||||||||| ||||||| ||||| || ||||||||||||||||||    
T  10251119 -tagacgagtttgaatcctttaaacaacttttg-aagctttaagttgcatctcctgatgaactgcagcttctggtgattcatagcttctgatgaacttgc 10251216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21702847 - 21703056
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcg---------tttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||          |||||||||||||||||| ||||||||| | ||||    
T  21702847 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattcaatgcccttcaatcctttcaaaatagccgttgctatacttttcaagtctt 21702946  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || |||||||||||| |||||||  ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  21702947 ctgcaatct-tagacgagtttgaatccttgaaacaaattttgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctga 21703044  T
Q  192 tgaacttgcttc 203  Q
    || |||||||||    
T  21703045 tgtacttgcttc 21703056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 48570278 - 48570070
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||         |||||||| |||||  ||||||||| | ||||    
T  48570278 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttttaatccttccaaaatagtcgttgttatacttttctagtctt 48570179  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||| |||||| |||||||||||| |||||||||||||| |  ||||||| ||||| | ||||||||||    
T  48570178 ctgcaatct-tagacgagtttgaatccgttaaacagcttttg-aaactttaagttgcatctcctgatgaattacagcttctggtgattctcagcttctga 48570081  T
Q  192 tgaacttgctt 202  Q
    | || ||||||    
T  48570080 taaaattgctt 48570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 30572230 - 30572430
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttc---------aaaatagccgttgccatacttttccaatctt 91  Q
    ||||||||||||| |||||||||| |||||||||  |||||||  |||||||||| ||||         |||||||||||||| ||||||||||| ||||    
T  30572230 acacttcgtacaatcgtactatgtcaacgctcttctaagaataaacatccaatgcttttcaatcctttcaaaatagccgttgctatacttttccagtctt 30572329  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| || || |||||| || ||||||||||| || ||| || |||||||||  |||||||||||||||| | ||||| ||||| |||| |||||||    
T  30572330 ctgcaatctc-agacgagtttgaatccttgaaacagctattg-aagctttaagttgtatctcctgatgaactgcaacttctggtgattcacaacttctga 30572427  T
Q  192 tga 194  Q
    |||    
T  30572428 tga 30572430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 25448613 - 25448402
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||         | ||||||||||| || |||   ||||||||| ||||    
T  25448613 acacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgctgcttcacttttccagtctt 25448514  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaact--gtagcttcttgtgatacacagcttct 189  Q
    ||||||| | ||| |||||| || ||| | ||||| |||||| || ||||||||| ||||| ||||||||||  | ||||||| ||||| | ||||||||    
T  25448513 ctgcaatctttagacgagtttgaatccgttaaacagcttttg-aagctttaagttgcatcttctgatgaactgcgcagcttctagtgattctcagcttct 25448415  T
Q  190 gatgaacttgctt 202  Q
    ||| |||||||||    
T  25448414 gataaacttgctt 25448402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 44821592 - 44821382
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||| ||| || ||          |||||||| |||||| |||||||| || ||||    
T  44821592 acacttcgtacaaacgtactatgtcaacactctttgaagaataagcatacaaagccttcaaatccttccaaaatagtcgttgctatactttttcagtctt 44821493  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    || |||    ||| |||||| || ||||| ||||||||||||||  ||||||||| ||||||||||||||||  ||||| | ||||| | ||||||||||    
T  44821492 ctacaaaccttagacgagtttgaatcctttaaacaacttttgaag-ctttaagttgcatctcctgatgaactacagcttatggtgattctcagcttctga 44821394  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  44821393 taaacttgcttc 44821382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23024821 - 23024953
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||| ||||||||||| ||||||||||| |||||| | ||||| | | |||||||||||||    
T  23024821 acacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgcta-actttccaagtcttctgcaattt 23024919  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaa 135  Q
    || |||||| |  | ||||||||||| ||||||||    
T  23024920 ct-ggcgagattaaatccttgaaacagcttttgaa 23024953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 21544188 - 21544251
Alignment:
Q  135 aaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaactt 198  Q
    |||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  21544188 aaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactt 21544251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19215645 - 19215778
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    ||||||||||||| |  ||||||| ||||||| |||| ||||| ||||| ||||| |||||||||||||||||  | ||||| | | |||||||||||||    
T  19215645 acacttcgtacaatcacactatgtcaacgctccttgaggaataagcatcaaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattt 19215743  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaa 135  Q
       |||||| | || ||||||||||| ||||||||    
T  19215744 tctggcgagcttgaatccttgaaacagcttttgaa 19215778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 19170242 - 19170187
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||||||||||||||||||| |||||| | |||||||||||||||||||||    
T  19170242 catcttctgatgaactgtagcttctggtgatataaagcttctgatgaacttgcttc 19170187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 22427259 - 22427194
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||| ||||||||||||||||| ||||||| |||||   ||||||||||||||||||||||    
T  22427259 ctttatgttgcatctcctgatgaactggagcttctggtgattttcagcttctgatgaacttgcttc 22427194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 35040199 - 35040409
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| |||||||||||||||  | ||||||||||         | ||||||||||| ||||||  |||||||| | ||||    
T  35040199 acacttcgtacaaacgtactttgtcaacgctctttgaagatcaagcatccaatgctttcaaatcctttcaaaatagtcgttgctttacttttctagtctt 35040298  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||| | |  ||| | |||||||||||| || | ||||||| |||| | ||||||| || ||||||| |||||     ||||||||    
T  35040299 ctgcaatctttagacgaggttggatccattaaacaacttttg-aagccttaagttgcatcccatgatgaattgcagcttctggtgatttttggcttctga 35040397  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  35040398 taaacttgcttc 35040409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 2327356 - 2327276
Alignment:
Q  122 aaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||  ||||||||| ||||||||||||||||| ||||||| |||||     ||||||||| ||||||||||    
T  2327356 aaacaacttttgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgatttttggcttctgataaacttgcttc 2327276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 22464710 - 22464645
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||| ||||||||||||||||||||| ||| |||||   |||||||| |||||||||||||    
T  22464710 ctttatgttacatctcctgatgaactgtagcatctggtgattttcagcttcttatgaacttgcttc 22464645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22600229 - 22600175
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  22600229 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 22600175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29215830 - 29215884
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||||| |||||||||||||| | |||||||||||    
T  29215830 acacttcgtacaattgtactttgttatcgctctttgaagaacaagcatccaatgc 29215884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36134223 - 36134277
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  36134223 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 36134277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 7745007 - 7744935
Alignment:
Q  122 aaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaa 195  Q
    ||||||||||||||| || || ||| ||||| ||||||||||| ||||||| |||||| |  ||||||||||||    
T  7745007 aaacaacttttgaaa-ctgtaggttgcatcttctgatgaactgcagcttctggtgatatatggcttctgatgaa 7744935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 17371188 - 17371269
Alignment:
Q  122 aaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||| ||  |||||| | ||| |||||  |||||||||||||||||| ||||||  |||||||||||  |||||||||    
T  17371188 aaacaactatttgaaacttcaggttgcatcttttgatgaactgtagcttctggtgatatgcagcttctgatagacttgcttc 17371269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39201039 - 39200986
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg 54  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | ||||||||||    
T  39201039 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatg 39200986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 26702020 - 26701964
Alignment:
Q  147 ccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||| |||||||||| |||||||| |||||   ||| ||||||||||||||||||    
T  26702020 ccatcttctgatgaactttagcttctggtgatcttcagtttctgatgaacttgcttc 26701964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 4e-80; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19066133 - 19065932
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  19066133 acacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaattt 19066034  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    |||||||||||||||||||||||||| |||||| || ||||||| ||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  19066033 ctaggcgagttagagtccttgaaacagcttttg-aagctttaagatccatctcctgatgaactgcagcttctggtgatatacagcttctgatgaacttgc 19065935  T
Q  201 ttc 203  Q
    |||    
T  19065934 ttc 19065932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 26589638 - 26589837
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctctttgaagaatat--gcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttct 102  Q
    |||||||| ||||||||||| ||||||||||||| |  ||  ||||||||||| ||||||| |||| ||||||| ||| ||| | ||||||| |||||||    
T  26589638 ttcgtacagacgtactatgtcaacgctctttgaaaatcattagcatccaatgcatttcaaactagctgttgccacactcttctagtcttctgtaatttct 26589737  T
Q  103 aggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgctt 202  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||| ||||||| |||||||| |||||| |||||||||||||    
T  26589738 aggcgagttagagtcattgaaacaacttttgaaaac-ttgagttccatctcttgatgaactgcagcttctggtgatacatagcttcagatgaacttgctt 26589836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22076522 - 22076312
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaa---------aatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||||| ||||| || |||         ||||| |||||| ||||||||| | ||||    
T  22076522 acacttcgtacaaatgtactatgtcaacgctctttgaagaataagcatcaaatgctttccaatccttccaaaatagtcgttgctatacttttcgagtctt 22076423  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| ||||||  | ||||| ||||| ||||| ||| ||||||||| ||||||||||||||||  | ||||| ||||| ||||||||||||    
T  22076422 ctgcaatctttagacgagtttaaatcctttaaacagctttt-aaagctttaagttgcatctcctgatgaactacatcttctggtgattcacagcttctga 22076324  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  22076323 tgaacttgcttc 22076312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12349027 - 12349205
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttc---------aaaatagccgttgccatacttttccaatctt 91  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||         ||||||| |||||| ||||||||||| ||||    
T  12349027 acactttgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaatcctttcaaaatagtcgttgctatacttttccagtctt 12349126  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttct 172  Q
    ||||||| | ||| |||||| || ||||||||||| |||||| || || |||||| ||||||||||||||||| |||||||    
T  12349127 ctgcaatct-tagacgagtttgaatccttgaaacagcttttg-aagctctaagttgcatctcctgatgaactgcagcttct 12349205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21618278 - 21618488
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||          |||||||| ||||||  |||||||||| ||||    
T  21618278 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctttacttttccagtctt 21618377  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    || |||| | |||  ||||| || ||| | ||||||||||||||  ||||||||| ||||| ||||||||||  ||||||| ||||| | ||||||||||    
T  21618378 ctacaatctttagaagagtttgaatccgttaaacaacttttgaag-ctttaagttgcatcttctgatgaactacagcttctggtgattctcagcttctga 21618476  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  21618477 taaacttgcttc 21618488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 16336161 - 16336366
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    ||||||||||||| |||||||||| |||||||||||||||||| |||| |||||| ||          |||||||| |||||| ||||||||||| ||||    
T  16336161 acacttcgtacaatcgtactatgtcaacgctctttgaagaataagcattcaatgccttctaatccttccaaaatagtcgttgctatacttttccagtctt 16336260  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||||| |||||||||||| || ||| ||||| ||||||||||||| ||  | ||||| ||||| | ||||||||||    
T  16336261 ctgcaatgtttagacgagtttgaatcctttaaacaacttttg-aagcttcaagttgcatctcctgatgatctacaacttctggtgattctcagcttctga 16336359  T
Q  192 tgaactt 198  Q
    | |||||    
T  16336360 taaactt 16336366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 33352041 - 33351834
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| ||||||||| ||||||||  |||||||||         | ||||||||||||| |||| ||||||||||| ||||    
T  33352041 acacttcgtacaaacgtactatgtcaacgctctt-gaagaataaacatccaatgtttttcaatcctttcaaaatagcc-ttgctatacttttccagtctt 33351944  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||| | | ||| |||||  || ||||||||||| |||||||   ||||||||| ||||||| |||||| || || |||| ||||| ||||||||||||    
T  33351943 ctgcactct-tagacgagtgtgaatccttgaaacagcttttgagg-ctttaagttgcatctcccgatgaaatgcagtttctggtgattcacagcttctga 33351846  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  33351845 tgaacttgcttc 33351834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 17316640 - 17316507
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||| |||||| |||| |||||||||||||| ||  | ||||| | | |||||||||||||    
T  17316640 acacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccgatgcttttcaaaatagccgctgtta-actttccaagtcttctgcaattt 17316542  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaa 135  Q
     | |||||| | || ||||||||||||||||||||    
T  17316541 tttggcgagcttgaatccttgaaacaacttttgaa 17316507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 19833148 - 19832938
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctcttt-gaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatct 90  Q
    |||||||||||||||||||||||| |||||||||| || ||| | ||||||||||||||         ||||||||| ||||||   ||||||||| |||    
T  19833148 acacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcacttttccagtct 19833049  T
Q  91 tctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctg 190  Q
    |||||||| | |||  ||||| || ||| | ||||| ||||| ||| ||||||||| ||||||||||||||||  | ||||| ||||| | |||||||||    
T  19833048 tctgcaatctttagatgagtttgaatccgttaaacagctttt-aaagctttaagttgcatctcctgatgaactacatcttctggtgattctcagcttctg 19832950  T
Q  191 atgaacttgctt 202  Q
    || | |||||||    
T  19832949 ataatcttgctt 19832938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 22386962 - 22387030
Alignment:
Q  135 aaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||| ||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  22386962 aaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttatgatgaacttgcttc 22387030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 16877343 - 16877457
Alignment:
Q  88 tcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagctt 187  Q
    ||||||||||| | ||| |||||| || ||| | ||||||||||||||  ||||||||| ||||||||||||||||  | ||| | ||||| ||||||||    
T  16877343 tcttctgcaatctttagacgagtttgaatccattaaacaacttttgaag-ctttaagttgcatctcctgatgaactacaacttttggtgattcacagctt 16877441  T
Q  188 ctgatgaacttgcttc 203  Q
    ||||||||||||||||    
T  16877442 ctgatgaacttgcttc 16877457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19482786 - 19482852
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatag 67  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||| ||||||||||| |||||||||||    
T  19482786 acacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatag 19482852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12423295 - 12423399
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||| |||||         | ||||||||||| |||||| ||||||||||| ||||    
T  12423295 acacttcgtacaaaggtactatgtcaacgctctttgaagaataagcatacaatgccttccaatcctttcaaaatagtcgttgctatacttttccagtctt 12423394  T
Q  92 ctgca 96  Q
    |||||    
T  12423395 ctgca 12423399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 17608296 - 17608228
Alignment:
Q  135 aaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||| | ||| ||||| |||||||||| |||||||| |||||| |||||||||||||||||||||||    
T  17608296 aaacttcaggttgcatcttctgatgaactatagcttctggtgatatacagcttctgatgaacttgcttc 17608228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15954737 - 15954947
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| ||||||||||||| || | |||| |||||| ||         ||||| ||| ||||||   | ||||||| ||||    
T  15954737 acacttcgtacaaacgtactttgtcaacgctctttgaataacaagcattcaatgccttcaaatcctttcaaattagtcgttgcttcatttttccagtctt 15954836  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | |||  ||||| || ||| | ||||| ||||||||  ||||||||| |||||| |||||||||  ||||||| || || | ||||||||||    
T  15954837 ctgcaatctttagaagagtttgaatccgttaaacagcttttgaag-ctttaagttgcatctcttgatgaactacagcttctggtaattctcagcttctga 15954935  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  15954936 taaacttgcttc 15954947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 21235292 - 21235357
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||| ||||||||||||||||| ||||||| |||||   ||||||||||||||||||||||    
T  21235292 ctttatgttgcatctcctgatgaactgcagcttctagtgattttcagcttctgatgaacttgcttc 21235357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 20488031 - 20487979
Alignment:
Q  3 acttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||||||| ||| |||||||||||||||| | |||||||||||    
T  20488031 acttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgc 20487979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 21128399 - 21128454
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||||||||||||||||||| |||||| | ||||||||||||||| |||||    
T  21128399 catcttctgatgaactgtagcttctggtgatataaagcttctgatgaactcgcttc 21128454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22802175 - 22802229
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| |||||||||||||||||||| | |||||||||||    
T  22802175 acacttcgtacaattgtactttgttaacgctctttgaagaacaagcatccaatgc 22802229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19086192 - 19086264
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgc 74  Q
    |||||||||||||  ||||||||| |||||||||  ||||| | ||||||||||| ||||||||||| ||||||    
T  19086192 acacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc-tttcaaaatagtcgttgc 19086264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16877247 - 16877299
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaat 53  Q
    |||||||||||||||||||| ||| |||||||||||| ||||  |||||||||    
T  16877247 acacttcgtacaaacgtactttgtcaacgctctttgaggaattagcatccaat 16877299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17381555 - 17381595
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaa 41  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  17381555 acacttcgtacaaacgtactttgtcaacgctctttgaagaa 17381595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 20635866 - 20635951
Alignment:
Q  122 aaacaacttttgaaaactttaagttccatctcctgatgaactgta----gcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||| ||  |||||||| ||| ||||| |||||| ||||||    |||||| |||||||| |||||||||||||||||||||    
T  20635866 aaacaactatttgaaactttaggttgcatcttctgatgtactgtacgtagcttctggtgatacatagcttctgatgaacttgcttc 20635951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 18435747 - 18435802
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||||  ||||||| |||||   ||||||||||||||||||||||    
T  18435747 catctcctgatgaactagagcttctagtgatcttcagcttctgatgaacttgcttc 18435802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 20730664 - 20730609
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||||| ||||||| |||||   |||||| |||||||||||||||    
T  20730664 catctcctgatgaactgcagcttctagtgattttcagcttatgatgaacttgcttc 20730609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21625135 - 21625189
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| |||||||||||||||||||| | |||| ||||||    
T  21625135 acacttcgtacaattgtactttgttaacgctctttgaagaacaagcatgcaatgc 21625189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32544299 - 32544353
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| ||||||||||||||||||  ||||||||||    
T  32544299 acacttcgtacaattgtactttgtcaacgctctttgaagaataaacatccaatgc 32544353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 16265120 - 16265055
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||| |||||| ||| |||||| ||||||| |||||   ||||||||||||||||||||||    
T  16265120 ctttatgttgcatctcttgacgaactgcagcttctggtgattttcagcttctgatgaacttgcttc 16265055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 22802320 - 22802385
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||| ||||||||||||||||  | ||||| |||||   ||||||||||||||||||||||    
T  22802320 ctttatgttgcatctcctgatgaactacaacttctggtgattttcagcttctgatgaacttgcttc 22802385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 4e-80; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 40851001 - 40851202
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  40851001 acacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccatacttttccagtcttctgcaattt 40851100  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    ||||||||||||||||||||||| || |||||| || ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  40851101 ctaggcgagttagagtccttgaaccagcttttg-aagctttaagttccatctcctgatgaactgtagcttctggtgatacacaacttctgatgaacttgc 40851199  T
Q  201 ttc 203  Q
    |||    
T  40851200 ttc 40851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21636796 - 21636595
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  21636796 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccatacttttccagtcttctgcaattt 21636697  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||| ||||||||||||||   ||||| |||||||||||||||||||||||||||    
T  21636696 ctaggcgagttagagtccttgaaacagcttttg-aagctttaagttccaactcctgatgaactgccacttctggtgatacacagcttctgatgaacttgc 21636598  T
Q  201 ttc 203  Q
    |||    
T  21636597 ttc 21636595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21605780 - 21605580
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||    
T  21605780 acacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgtcatacttttccagtcttctgcaattt 21605681  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||| |||||||||| ||||||||||||||||    
T  21605680 ctaggcgagttagagtccttgaaacaacttttg-aagctttaagttccatctcctgatgaactgcaacttctggtgatacacaacttctgatgaacttgc 21605582  T
Q  201 tt 202  Q
    ||    
T  21605581 tt 21605580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 46796493 - 46796293
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| | ||| ||||| ||||||| |||||||||  ||||||||||| ||||||||||| |    
T  46796493 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagtatctaatgcctttcaaattagccgttgtaatacttttccagtcttctgcaatct 46796394  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     ||| |||||| || ||||| |||||||||||| || ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  46796393 -tagacgagtttgaatcctttaaacaacttttg-aagctttaagttgcatctcctgatgaactgcagcttcttgtgattcacagcttctgatgaacttgc 46796296  T
Q  201 ttc 203  Q
    |||    
T  46796295 ttc 46796293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1728141 - 1727942
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||| ||||||| || | || |||| ||||| ||||||||||| |||||||||||||||||  | ||||| | | |||| ||||||||    
T  1728141 acacttcgtacaaacgcactatgtcaatgttccttgaggaataagcatccaatgcttttcaaaatagccgttgtta-actttccaagtcttttgcaattt 1728043  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
       |||||| | || ||||||||||||||||||||| || ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  1728042 tctggcgagattgaatccttgaaacaacttttgaaa-ctataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgc 1727944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21640900 - 21641108
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaa---------aatagccgttgccatacttttccaatctt 91  Q
    |||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||| ||||||         |||||||||||| ||||||||||| ||||    
T  21640900 acacttcgtaaaaacgtactatgtcaacgctctttgaaaaataagcatccaatgcttttcaatccttccaaaatagccgttgctatacttttccagtctt 21640999  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    || |||| | |||||||||| || ||||||||||| |||||||   ||||||||| ||||||||||||||||| | ||||| ||||| ||||||||||||    
T  21641000 ctacaatct-taggcgagtttgaatccttgaaacagcttttgagg-ctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctga 21641097  T
Q  192 tgaacttgctt 202  Q
    |||||||||||    
T  21641098 tgaacttgctt 21641108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 30054339 - 30054142
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctcttt-gaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttcta 103  Q
    |||||||||||||||||||| |||||||||| |  ||||| ||| ||||||| ||||||| ||| |||||| ||||||||| | ||||||||||||| ||    
T  30054339 ttcgtacaaacgtactatgtcaacgctcttttgttgaataagcacccaatgcctttcaaagtagtcgttgctatacttttcaagtcttctgcaattt-ta 30054241  T
Q  104 ggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||| || | ||||||||| ||||||||  |||| | || ||||||||||||||||| || |||| ||||| ||||||||||||||||||||||||    
T  30054240 ggcgagtttgaattcttgaaacagcttttgaag-ctttgaattgcatctcctgatgaactgaagtttctggtgattcacagcttctgatgaacttgcttc 30054142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 49666531 - 49666331
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatg-catccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatt 99  Q
    |||||||||||||||||| ||||| || ||||||||||||||||| | | |||| | ||||||||||| |||||  ||||||||||| |||||||||||     
T  49666531 acacttcgtacaaacgtaatatgtcaatgctctttgaagaatatgtctttcaatcc-tttcaaaatagtcgttgttatacttttccagtcttctgcaatc 49666433  T
Q  100 tctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttg 199  Q
    | ||| |||||| || ||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||| ||||| |||| ||| ||||||| |||    
T  49666432 t-tagacgagtttgaatccttgaaacaacttttgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattcacaacttatgatgaaattg 49666335  T
Q  200 cttc 203  Q
    ||||    
T  49666334 cttc 49666331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 14955460 - 14955670
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||         |||||||||  |||||  ||| |||||| ||||    
T  14955460 acacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatactttcaaaatagttgttgctttacctttccagtctt 14955559  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||| ||||||||  |||| |||| ||||||||||||||||| | ||||| ||||| | ||||||||||    
T  14955560 ctgcaatctttagacgagtttgaatccattaaacagcttttgaag-ctttgagttacatctcctgatgaactgcaacttctggtgattctcagcttctga 14955658  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  14955659 taaacttgcttc 14955670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 2785097 - 2785308
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctcttt-gaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatct 90  Q
    |||||||||||||||||||||||| |||||||||| || ||| | ||||||||||||||         |||||||||  |||||   ||||||||| |||    
T  2785097 acacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagttgttgcttcacttttccagtct 2785196  T
Q  91 tctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctg 190  Q
    |||||||| | ||| |||||| || ||| | ||||||||||||||  ||||||||| ||||||||||||||||  | ||||| ||||| | ||||||||     
T  2785197 tctgcaatctttagacgagtttgaatccgttaaacaacttttgaag-ctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttcta 2785295  T
Q  191 atgaacttgcttc 203  Q
    || ||||||||||    
T  2785296 ataaacttgcttc 2785308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9700162 - 9700029
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||| ||||||||||| ||||||||||| |||||  | ||||| | | |||||||||||||    
T  9700162 acacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgtta-actttccaagtcttctgcaattt 9700064  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaa 135  Q
       |||||| | || ||||||||||||||||||||    
T  9700063 tctggcgagcttgaatccttgaaacaacttttgaa 9700029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 15833550 - 15833626
Alignment:
Q  122 aaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaactt 198  Q
    |||||||| ||  |||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  15833550 aaacaactatttgaaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactt 15833626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 24775660 - 24775452
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| || ||||||||||||||| |||| |||||| ||         |||||||||  |||||   ||||||||| ||||    
T  24775660 acacttcgtacaaacgtactttgtcaaagctctttgaagaataagcattcaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtctt 24775561  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaact--gtagcttcttgtgatacacagcttct 189  Q
    ||||||| | ||| |||||| || ||| | ||||| ||||||||  ||||||||| ||||||||||||||||  | ||||||| ||||| | |||||| |    
T  24775560 ctgcaatctttagacgagtttgaatccgttaaacagcttttgaag-ctttaagttgcatctcctgatgaactgcgcagcttctggtgattctcagcttgt 24775462  T
Q  190 gatgaacttg 199  Q
    ||| ||||||    
T  24775461 gataaacttg 24775452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22140797 - 22140976
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||| ||||||||||| |||||||||||||||| | ||||||||||         |  |||||||||| |||||    |||| || | ||||    
T  22140797 acacttcgtacatacgtactatgtcaacgctctttgaagaacaagcatccaatgttttcaaaacccttcaaaatagtcgttggttcacttatctagtctt 22140896  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttct 172  Q
    |||||||   |||||||||| || ||| |  |||| |||||| |||||||||||| |||||||||||||||||||||||||    
T  22140897 ctgcaatccttaggcgagtttgaatccgttgaacagcttttg-aaactttaagttgcatctcctgatgaactgtagcttct 22140976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 10529503 - 10529566
Alignment:
Q  135 aaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaactt 198  Q
    |||||||| ||| ||||| ||||||| ||||||||||| |||||||||||||||||||||||||    
T  10529503 aaactttaggttgcatcttctgatgagctgtagcttctggtgatacacagcttctgatgaactt 10529566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 20627557 - 20627356
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| ||||||||||||  || | ||||||||||| ||         |||||||||  |||||   ||||||||| ||||    
T  20627557 acacttcgtacaaacgtactttgtcaacgctctttgataaacaagcatccaatgccttcaaatccattcaaaatagttgttgcttcacttttccagtctt 20627458  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    |||||||   ||| |||||| || ||| | ||||| ||||||||  ||||||||| ||||||||||||||||| | ||||| |||||   ||||||||||    
T  20627457 ctgcaatcattagacgagtttgaatccattaaacatcttttgaag-ctttaagttgcatctcctgatgaactgcaacttctggtgattttcagcttctga 20627359  T
Q  192 tga 194  Q
    |||    
T  20627358 tga 20627356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 53056853 - 53056668
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| |||||||||||||||| | ||||||||||         | ||||||||||| ||||||   ||||||||| ||||    
T  53056853 acacttcgtacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtctt 53056754  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgat 178  Q
    ||||||| | ||| |||  | || ||| | ||||| |||||| |||| ||||||| |||| | |||||||||| ||||||| |||||    
T  53056753 ctgcaatctttagacgatgttgaatccattaaacagcttttg-aaaccttaagttgcatcccatgatgaactgcagcttctagtgat 53056668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 5213677 - 5213788
Alignment:
Q  60 caaaatagccgttgccatacttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatg 159  Q
    ||||||||  ||||| ||||||||||| ||||||||||| | ||  |||||| || ||| | ||||| |||||| || ||||||||| ||||||||||||    
T  5213677 caaaatagttgttgctatacttttccagtcttctgcaatctttatacgagtttgaatccgttaaacagcttttg-aagctttaagttgcatctcctgatg 5213775  T
Q  160 aactgtagcttct 172  Q
    ||||  |||||||    
T  5213776 aactacagcttct 5213788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 2561378 - 2561433
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||||  ||||||| ||||| | ||||||||||||||||||||||    
T  2561378 catctcctgatgaactagagcttctggtgattctcagcttctgatgaacttgcttc 2561433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11223596 - 11223650
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    ||||||||||||||| |||| ||| |||||||||||||||| | |||||||||||    
T  11223596 acacttcgtacaaacatactttgtcaacgctctttgaagaacaagcatccaatgc 11223650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29855442 - 29855496
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||||||||| ||| |||||| ||||||||| | |||||||||||    
T  29855442 acacttcgtacaaacgtactctgtcaacgctttttgaagaacaagcatccaatgc 29855496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45858875 - 45858821
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||| ||||||| ||| |||||||||||||| ||| |||||||||||    
T  45858875 acacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgc 45858821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 11869248 - 11869311
Alignment:
Q  140 ttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||| |||| |||||||||||| ||||||| |||||   |||||||||||||| |||||||    
T  11869248 ttaagttgcatcccctgatgaactgcagcttctggtgattttcagcttctgatgaaattgcttc 11869311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11909150 - 11909096
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||| | ||||||| ||| |||||||||||||| ||| |||||||||||    
T  11909150 acacttcgtaaagacgtactttgtcaacgctctttgaaggataagcatccaatgc 11909096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 13954205 - 13954267
Alignment:
Q  122 aaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacag 184  Q
    |||||||| ||  |||||||| ||| ||||| || |||||||||||||||| |||||||||||    
T  13954205 aaacaactatttgaaactttaggttgcatcttctcatgaactgtagcttctggtgatacacag 13954267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14969360 - 14969414
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||| ||| ||||| ||| |||||| ||||||||||| |||||||||||    
T  14969360 acacttcgtaaaaatgtactttgtcaacgctatttgaagaataagcatccaatgc 14969414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33583262 - 33583320
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctc-tttgaagaatatgcatccaatgcgtt 58  Q
    |||||||||||||||||||| ||| ||||||| ||||| ||| | ||||||||||||||    
T  33583262 acacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgtt 33583320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47207739 - 47207793
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  47207739 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 47207793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 50300256 - 50300314
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctc-tttgaagaatatgcatccaatgcgtt 58  Q
    |||||||||||||||||||| ||| ||||||| ||||| ||| || |||||||||||||    
T  50300256 acacttcgtacaaacgtactttgtcaacgctcttttgaggaacatacatccaatgcgtt 50300314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 46349839 - 46349760
Alignment:
Q  123 aacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||||||||  ||| ||||| | ||||||||||||||| | ||||| |||||   |||||||| |||||||||||||    
T  46349839 aacaacttttgaagtctt-aagttgcttctcctgatgaactgcaacttctggtgattttcagcttctaatgaacttgcttc 46349760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 47207886 - 47207942
Alignment:
Q  139 tttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaa 195  Q
    |||| ||| ||||||||||||||||| ||||||| |||||   ||||||||||||||    
T  47207886 tttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaa 47207942  T

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Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 51341179 - 51341239
Alignment:
Q  135 aaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaa 195  Q
    |||||||| ||| ||||| ||||||||||  || |||| |||||| |||||||||||||||    
T  51341179 aaactttaggttgcatcttctgatgaactacagtttctagtgatatacagcttctgatgaa 51341239  T

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Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22190874 - 22191076
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||    
T  22190874 acacttcgtacaaacgtactatgtcaacgctctttgaagaatcagcatccaatgcatttcaaaatagttgttgccatacttttccagtcttctgcaattt 22190973  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    ||| || ||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  22190974 ctaagcaagttagagtccttgaaacagcttttgaaaactttaagttccacctcttgatgaactgcagcttctggtgatacacagcttctgatgaacttgc 22191073  T
Q  201 ttc 203  Q
    |||    
T  22191074 ttc 22191076  T

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Target: chr4; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 9 - 202
Target Start/End: Original strand, 40860703 - 40860895
Alignment:
Q  9 tacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcga 108  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  40860703 tacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaattagccattgccatacttttccagtcttctgcaatttctaggcga 40860802  T
Q  109 gttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgctt 202  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  40860803 gttatagtccttgaaacaacttttg-aaactttaagttccatctcctgatgaactgtagcttctggtgatacacaacttctgatgaacctgctt 40860895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17398757 - 17398557
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  17398757 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgctatacttttccagtcttctgcaattt 17398658  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||| || |||||||||||||||||| || ||||||||| ||||||||||||||| | ||||||| ||||| || ||||||||||||||||||    
T  17398657 -taggcgagtttgaatccttgaaacaacttttg-aagctttaagttgcatctcctgatgaaccgcagcttctggtgattcatagcttctgatgaacttgc 17398560  T
Q  201 ttc 203  Q
    |||    
T  17398559 ttc 17398557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 15475226 - 15475030
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||| ||||||||||||| |||||||||||| || || ||||||||||| |||||||||||||||||||||||||||| | ||||||||||| |    
T  15475226 acacttcgtataaacgtactatgtcaacgctctttgaggagtaagcatccaatgcatttcaaaatagccgttgccatacttttctactcttctgcaatct 15475127  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaactt 198  Q
     ||| ||||||| | ||||||||||| |||||| ||||||| ||||| || ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  15475126 ttagacgagttaaaatccttgaaacagcttttg-aaactttgagttcaatttcctgatgaactgtagcttctggtgatacacagcttttgatgaactt 15475030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 9751623 - 9751427
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    ||||||||| ||||| |||||||| |||||||||||||||||  ||||||||||| ||||||| |||||||||||| ||| ||||| ||||| | |||||    
T  9751623 acacttcgtgcaaacatactatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagccgttgccacactcttccagtcttccgtaattt 9751524  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaactt 198  Q
     |||||||||||||||||||||||||  |||||||||| || || |||||||| |||||||||| ||||||| |||||||| ||||||||||||||||    
T  9751523 ttaggcgagttagagtccttgaaacaggttttgaaaac-ttgagctccatctcttgatgaactgcagcttctggtgatacatagcttctgatgaactt 9751427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 39419817 - 39419617
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||  ||||| ||||| || |||| |||||||||||| ||| || || |||| || |||||    
T  39419817 acacttcgtacaaacgtactatgtcaacgct-tttgaagaattagcatcaaatgcattccaaactagccgttgccacactctttcagtcttttgtaattt 39419719  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    |||||||||||||||||||||||||| |||||| ||||||| ||||| || ||||||||||||| ||||||| |||||||||| ||||||||||||| ||    
T  39419718 ctaggcgagttagagtccttgaaacagcttttg-aaactttgagttcaatttcctgatgaactgcagcttctggtgatacacaacttctgatgaactagc 39419620  T
Q  201 ttc 203  Q
    |||    
T  39419619 ttc 39419617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 38513906 - 38514102
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaa-tt 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||   |||||||||| ||| ||| ||||||||| || ||| ||||| ||||||  || ||    
T  38513906 acacttcgtacaatcgtactatgtcaacgctctttgaagaattaacatccaatgcattttaaactagccgttgtcacactcttccagtcttctttaattt 38514005  T
Q  100 tctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaact 197  Q
    | ||||||| ||||||||||||||||| ||||||||| | || ||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||    
T  38514006 tataggcgaattagagtccttgaaacagcttttgaaagc-ttgagttccatctcttgatgaactgcagcttctagtgatacatagcttctgatgaact 38514102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6517513 - 6517723
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaa---------aatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||  |||| || |||         ||||| |||||| ||||||||||| ||||    
T  6517513 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatctcatgctttccaatccttccaaaatagtcgttgctatacttttccagtctt 6517612  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||||| ||| ||||||||||  ||||||||| ||||||||||||||||  | ||||| ||||| | ||||||||||    
T  6517613 ctgcaatctttagacgagtttgaatcctttaaataacttttgaag-ctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctga 6517711  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  6517712 tgaacttgcttc 6517723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 10692879 - 10693089
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    ||||||| |||||||||||| ||| |||||||||||||||| | ||||||||||| ||         |||||||||  |||||   ||||||||| ||||    
T  10692879 acacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtctt 10692978  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||||||||||||  ||||||||| ||||||||||||||||  ||||||| ||||| | ||||||||||    
T  10692979 ctgcaatctttagacgagtttgaatccgttaaacaacttttgaag-ctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctga 10693077  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  10693078 tgaacttgcttc 10693089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 10906645 - 10906855
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    ||||||| |||||||||||| ||| |||||||||||||||| | ||||||||||| ||         |||||||||  |||||   ||||||||| ||||    
T  10906645 acacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtctt 10906744  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||||||||||||  ||||||||| ||||||||||||||||  ||||||| ||||| | ||||||||||    
T  10906745 ctgcaatctttagacgagtttgaatccgttaaacaacttttgaag-ctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctga 10906843  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  10906844 tgaacttgcttc 10906855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 3105502 - 3105324
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaa---------aatagccgttgccatacttttccaatctt 91  Q
    ||||||||||||||| |||||||| ||||||||||||||||||  |||||||| | ||||||         |||||||||||  ||||||||||| ||||    
T  3105502 acacttcgtacaaacatactatgtcaacgctctttgaagaataaccatccaatacttttcaatcctttcaaaatagccgttggaatacttttccagtctt 3105403  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttct 172  Q
    ||||||| | ||| |||||| || ||||||||||| |||||| || ||||||||| ||||||||||||||||| |||||||    
T  3105402 ctgcaatct-tagacgagtttgaatccttgaaacagcttttg-aagctttaagttgcatctcctgatgaactgcagcttct 3105324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 14571162 - 14571262
Alignment:
Q  102 taggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgct 201  Q
    |||||||||| || ||||||||||||||||||||  ||||||||| ||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||    
T  14571162 taggcgagtttgaatccttgaaacaacttttgaag-ctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgct 14571260  T
Q  202 tc 203  Q
    ||    
T  14571261 tc 14571262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20977485 - 20977618
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||| ||||||||||| |||||||||||||||||  | ||||| | | |||||||||||||    
T  20977485 acacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattt 20977583  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaa 135  Q
       |||||| | || ||||||||||||||||||||    
T  20977584 tctggcgagcttgaatccttgaaacaacttttgaa 20977618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27188721 - 27188588
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||| ||||||||||| ||||||||||| |||||  | ||||| | | |||||||||||||    
T  27188721 acacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgtta-actttccaagtcttctgcaattt 27188623  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaa 135  Q
       |||||| | || ||||||||||||||||||||    
T  27188622 tctggcgagcttgaatccttgaaacaacttttgaa 27188588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 413030 - 413240
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |  ||| |||||| ||         ||||| ||||||||||   ||||||| | ||||    
T  413030 acacttcgtacaatcgtactttgtcaacgctctttgaagaacaaacattcaatgccttcaaatcctttcaaattagccgttgcttcacttttcgagtctt 413129  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    |||||||   ||| |||| | || ||| |  |||||||||||||  |||||||||  |||||||||||||||| ||||||| |||||   ||||||||||    
T  413130 ctgcaatgcttagacgagattgaatccattgaacaacttttgaag-ctttaagttgaatctcctgatgaactgcagcttctggtgattttcagcttctga 413228  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  413229 tgaacttgcttc 413240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16940044 - 16940150
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||| |||||         | ||||||||||| |||||| ||||||||||| ||||    
T  16940044 acacttcgtacaaacgtactatgtcaacgctccttgaagaataagcattcaatgcctttcaatcctttcaaaatagtcgttgctatacttttccagtctt 16940143  T
Q  92 ctgcaat 98  Q
    |||||||    
T  16940144 ctgcaat 16940150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 17247360 - 17247481
Alignment:
Q  81 tttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatac 180  Q
    ||||||||||||||||||   ||| |||| | || ||| |  |||||||||||||  ||||||| | ||||||||||||||||| ||||||| |||||      
T  17247360 tttccaatcttctgcaatgcttagacgagattgaatccattgaacaacttttgaag-ctttaagattcatctcctgatgaactgcagcttctggtgattt 17247458  T
Q  181 acagcttctgatgaacttgcttc 203  Q
     ||||||||||||||||||||||    
T  17247459 tcagcttctgatgaacttgcttc 17247481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 3499735 - 3499600
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaat-t 99  Q
    |||||||||||||| ||||||||| ||||||| ||||||||   ||||||||||  ||||||  ||||||||| ||||||  |||| ||||||| ||| |    
T  3499735 acacttcgtacaaatgtactatgtcaacgctcattgaagaaatagcatccaatgtatttcaatctagccgttgtcatactcctccagtcttctgtaatct 3499636  T
Q  100 tctaggcgagttagagtccttgaaacaacttttgaa 135  Q
    | | || ||| | || ||||||||||| ||||||||    
T  3499635 ttttggtgagcttgaatccttgaaacagcttttgaa 3499600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 54679958 - 54680157
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| || ||||||||||||| |  |||||||||| ||         |||||||||  |||||   ||||||||| ||||    
T  54679958 acacttcgtacaaacgtactttgtcaatgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtctt 54680057  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    |||||||   ||| |||||| ||  || | ||||| ||||||||  ||||||||| ||||||||||||||||| ||||||| |||||   ||||||||||    
T  54680058 ctgcaatcattagacgagtttga--ccattaaacagcttttgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctga 54680154  T

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Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 3793296 - 3793360
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgctt 202  Q
    ||||||||| ||||||||||||||||| ||||||| |||||   ||||||||| |||||||||||    
T  3793296 ctttaagttgcatctcctgatgaactgcagcttctagtgattttcagcttctggtgaacttgctt 3793360  T

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Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25651187 - 25651133
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||| |||||||||||||| || |||||||||||||||||| |||| ||||||    
T  25651187 acactttgtacaaacgtactacgtcaacgctctttgaagaataagcattcaatgc 25651133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37435618 - 37435564
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||||||| |||||||||||||||| | |||||||||||    
T  37435618 acacttcgtacaatagtactatgtcaacgctctttgaagaacaagcatccaatgc 37435564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 17700835 - 17700748
Alignment:
Q  47 atccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaa 135  Q
    ||||||||| |||||||||||||||||  | ||||| | | |||||||||||||   |||||| | || ||||||||||||||||||||    
T  17700835 atccaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattttctggcgagcttgaatccttgaaacaacttttgaa 17700748  T

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Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 55731872 - 55732003
Alignment:
Q  57 tttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctg 156  Q
    ||||||||||| |||||   ||| | |||| |||| |||||||  ||| |||||| || ||| | ||||||||||||||   |||||||| |||||||||    
T  55731872 tttcaaaatagtcgttgatttacctctccagtcttttgcaattgttagacgagtttgaatccattaaacaacttttgaagt-tttaagttgcatctcctg 55731970  T
Q  157 atgaactgtagcttcttgtgatacacagcttct 189  Q
    |||||||| ||||||  ||||| | ||||||||    
T  55731971 atgaactgcagcttccggtgattctcagcttct 55732003  T

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Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 3483752 - 3483803
Alignment:
Q  4 cttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    ||||||||||  ||||| ||| |||||||||||||||||| |||||||||||    
T  3483752 cttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgc 3483803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 19884886 - 19884941
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||||  ||||||| |||||   ||||||||||||||||||||||    
T  19884886 catctcctgatgaactacagcttctggtgattgtcagcttctgatgaacttgcttc 19884941  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19884730 - 19884784
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  19884730 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 19884784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29121398 - 29121448
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatcca 51  Q
    |||||||||||||||||||| ||| |||||||||| ||||| | |||||||    
T  29121398 acacttcgtacaaacgtactttgtcaacgctctttaaagaacaagcatcca 29121448  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 13576052 - 13575996
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatga 194  Q
    ||||| ||| ||||||||||||||||| ||||||| |||||   |||||||||||||    
T  13576052 ctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 13575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 34881 - 34680
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||    
T  34881 acacttcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatattcgttgccatacttttccagtcttctgcaattt 34782  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    ||||||||||| || |||||||||||||||||| |||||||||||| |||||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  34781 ctaggcgagtttgaatccttgaaacaacttttg-aaactttaagttgcatctcctgaagaactgcagcttctagtgatacacagcttctgatgaacttgc 34683  T
Q  201 ttc 203  Q
    |||    
T  34682 ttc 34680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 25742 - 25541
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||| |||| ||||||||    
T  25742 acacttcgtacaaacgtactatgtcaacgctttttgaagaataagcatccaatgcatttcaaaatatctgttgccatacttttccagtcttttgcaattt 25643  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    ||||||||||| || |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||    
T  25642 ctaggcgagtttgaatccttgaaacaacttttg-aaactttaagttgcatctcctgatgaactgcagcttctggtgatacatagcttctgatgaagttgc 25544  T
Q  201 ttc 203  Q
    |||    
T  25543 ttc 25541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19339378 - 19339177
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||| |    
T  19339378 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccacacttttccagtcttctgcaatct 19339279  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  19339278 ttaggcgagttagagtccttgaaacaggttttg-aaactttaagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgc 19339180  T
Q  201 ttc 203  Q
    |||    
T  19339179 ttc 19339177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 21381552 - 21381355
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctag 104  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||| | |||    
T  21381552 ttcgtacagacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagccgttgccacacttttccagtcttctgcaatctttag 21381453  T
Q  105 gcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  21381452 gcgagttagagtccttgaaacaacttttg-aaactataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaactagcttc 21381355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 48062945 - 48062747
Alignment:
Q  4 cttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttcta 103  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||  |||||||||    
T  48062945 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatacttttccagtcttcgacaatttcta 48062846  T
Q  104 ggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||| || | |||||||||||||||| || ||||||||| |||||| |||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  48062845 ggcgagtttgaattcttgaaacaacttttg-aagctttaagttgcatctcttgatgaactgcagcttctggtgatacacagcttctgatggacttgcttc 48062747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27871748 - 27871950
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgct-ctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatt 99  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| |||||  |||||||||||    
T  27871748 acacttcgtacaaacgtactatgtcaacgcttctttgaagaataagcatccaatgcatttcaaaatagccgttgccatactattccagacttctgcaatt 27871847  T
Q  100 tctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttg 199  Q
    |||||| || || || |||||||||||||||||| || ||||||||| ||| ||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  27871848 tctaggtgaatttgaatccttgaaacaacttttg-aagctttaagttgcatttcctgatgaactgcagcttctggtgattcacagcttctgatgaacttg 27871946  T
Q  200 cttc 203  Q
    ||||    
T  27871947 cttc 27871950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 14425477 - 14425677
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| |    
T  14425477 acacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttntccagtcttctgcaatgt 14425576  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||| || |||||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| ||||| ||| || |||||||||    
T  14425577 -taggcgagtttgaatccttgaaacaacttttg-aagctttaagttgcatctcctgatgaactntagcttctggtgaaacacancttttgntgaacttgc 14425674  T
Q  201 ttc 203  Q
    |||    
T  14425675 ttc 14425677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24794843 - 24794681
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgct-ctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatt 99  Q
    |||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  24794843 acacttcgtacaaacgtactatgtcaacgcttctttgaggaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatt 24794744  T
Q  100 tctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaact 163  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||  ||||||||||||    
T  24794743 tctaggcgagttagagtccttgaaacaacttttg-aaactttgagttccaattcctgatgaact 24794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 32264839 - 32264644
Alignment:
Q  8 gtacaaacgtactatgttaacgct-ctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggc 106  Q
    ||||||||||||||||| |||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32264839 gtacaaacgtactatgtcaacgcttctttgaagaataaacatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatttctaggc 32264740  T
Q  107 gagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| || ||||||||| |||||||| || ||||||||  ||||||||||||||||| ||||||| |||||||||| ||| |||||| ||| ||||    
T  32264739 gagtttgaatccttgaaataacttttg-aagctttaagtcgcatctcctgatgaactgcagcttctggtgatacacaacttttgatgatctttcttc 32264644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 48806007 - 48805806
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||| |||| |||||||||||| ||||||||||||||||   ||||||||||| ||||||| |||||||||||||| |  |||| |||| || |||||    
T  48806007 acactttgtacgaacgtactatgtcaacgctctttgaagaaatagcatccaatgcatttcaaactagccgttgccatattcctccagtcttatgtaattt 48805908  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||| |    
T  48805907 ctaggcgagttagagtccttgaaacagcttttgaaaac-ttgagttccatctcttgatgaactgcagcttctggtgatacatagcttctgatgaactttc 48805809  T
Q  201 ttc 203  Q
    |||    
T  48805808 ttc 48805806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 4412086 - 4411889
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctag 104  Q
    |||||||| ||| || |||| ||||||||||||  | || ||||||||||| ||||||  ||||||||| ||||||| |||| |||||||||||||||||    
T  4412086 ttcgtacagacgcacaatgtcaacgctctttgagaattaagcatccaatgcttttcaagttagccgttgtcatacttctccagtcttctgcaatttctag 4411987  T
Q  105 gcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||||||| ||||||| |||||| ||||||||||||||| |||||||    
T  4411986 gcgagttagagtccttgaaacagcttttg-aaactttaagttcaatctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttc 4411889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 47 - 203
Target Start/End: Complemental strand, 4429162 - 4429005
Alignment:
Q  47 atccaatgcgtttcaaaatagccgttgccata--cttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaag 144  Q
    ||||||||| ||||||  ||||||||||||||  ||| |||  ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  4429162 atccaatgcttttcaagttagccgttgccatatacttctcctgtcttctgcaatttttaggcgagttagagtccttgaaacagcttttgaaa-ctttaag 4429064  T
Q  145 ttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||| |||||| ||||||||| ||||||| |||||| ||||||||||||||| |||||||    
T  4429063 ttcaatctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttc 4429005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 1293060 - 1293184
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||  ||||| ||||||||||| |||| ||||||||    
T  1293060 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagttgttgctatacttttccagtcttttgcaattt 1293159  T
Q  101 ctaggcgagttagagtccttgaaaca 126  Q
     ||| |||||| || |||||||||||    
T  1293160 -tagtcgagtttgaatccttgaaaca 1293184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 8182960 - 8183169
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||| ||||| ||||| |||||||||||||||||| ||||| | ||         | |||||||||||  ||||| ||||||||||| ||||    
T  8182960 acacttcgtacagacgtattatgtcaacgctctttgaagaataagcatcaagtgtctttcaatcctttcaaaatagttgttgctatacttttccagtctt 8183059  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| ||  | || | ||||||||| ||  |||| |||| ||||||||||||||||| ||||||| ||||| |||||||| |||    
T  8183060 ctgcaatct-tagacgagtttgaaacttttatacaactttttaag-ctttgagttgcatctcctgatgaactgcagcttctggtgattcacagcttttga 8183157  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  8183158 tgaacttgcttc 8183169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 2265647 - 2265446
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||  ||| | ||          ||||||||||||||| |||||||| || ||||    
T  2265647 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattaaataccttcaaatccttccaaaatagccgttgctatactttttcagtctt 2265548  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||  | ||||| ||||| ||| ||||||||| ||||||||||||||||  | ||||| ||||| | ||||||||||    
T  2265547 ctgcaatctttagacgagtttgaatctgttaaacagctttt-aaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctga 2265449  T
Q  192 tga 194  Q
    |||    
T  2265448 tga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 15704620 - 15704457
Alignment:
Q  8 gtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatcttctgcaat 98  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| ||          |||||||| |||||| ||||||||||| |||||||||||    
T  15704620 gtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctatacttttccagtcttctgcaat 15704521  T
Q  99 ttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaact 163  Q
     | ||| |||||| || ||| | ||||| |||||| || ||||||||| ||||| ||||||||||    
T  15704520 ctttagacgagtttgaatccgttaaacagcttttg-aagctttaagtttcatcttctgatgaact 15704457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 4821504 - 4821713
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc--------gtttcaaaatagccgttgccatacttttccaatcttc 92  Q
    |||||||||||||||||||| | | |||||||||||||||| | |||||||||||         ||||||||||||||||||   ||||||| | |||||    
T  4821504 acacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaatctttcaaaatagccgttgctccacttttctagtcttc 4821603  T
Q  93 tgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgat 192  Q
    || ||| | ||| |||||| || |   | ||||| |||||| || |||||||||  |||||| ||||||||| ||||||| |||||   ||||||||||     
T  4821604 tgtaatctttagacgagtttgaatttgttaaacagcttttg-aagctttaagttgtatctccggatgaactgcagcttctggtgattttcagcttctgac 4821702  T
Q  193 gaacttgcttc 203  Q
    |||||||||||    
T  4821703 gaacttgcttc 4821713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 48236899 - 48236820
Alignment:
Q  123 aacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||||||||  ||||||||| ||||||||||||||||| ||||||| |||||   ||||||||||||||||||||||    
T  48236899 aacaacttttgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttc 48236820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14426577 - 14426748
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||| ||||||||||||| ||| |||||||||||||||| | ||||||||||         | ||||||||||| ||||||   ||||||||| ||||    
T  14426577 acacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtctt 14426676  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactg 164  Q
    ||||||| | |||  ||||| || ||| | ||||| ||| || || ||||||||| |||||||||||||||||    
T  14426677 ctgcaatctttagatgagtttgaatccattaaacagcttctg-aagctttaagttgcatctcctgatgaactg 14426748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 28622353 - 28622274
Alignment:
Q  123 aacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||||||||  ||||||||| ||||||||||||||||| ||||||| |||||    ||||| |||||||||||||||    
T  28622353 aacaacttttgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgatttttagcttatgatgaacttgcttc 28622274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19711141 - 19711087
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||||||||| ||| || ||||||||||| ||| |||||||||||    
T  19711141 acacttcgtacaaacgtactttgtcaatgctctttgaaggataagcatccaatgc 19711087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33605715 - 33605769
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    ||||||||||||| |||||| ||| |||||||||||||||| | |||||||||||    
T  33605715 acacttcgtacaatcgtactttgtcaacgctctttgaagaacaagcatccaatgc 33605769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 30944451 - 30944272
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||  ||| | ||| |||||||||||||||||| ||||||||||         | |||||||||||  |||||   ||||||||||||||    
T  30944451 acacttcgtacaattgtattttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccaatctt 30944352  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttct 172  Q
    |||||||   ||| |||| |  | ||| |  |||||| |||| || ||||||||| ||||||||||||||||| |||||||    
T  30944351 ctgcaatacttagacgagattaaatccgttgaacaacctttg-aagctttaagttgcatctcctgatgaactgcagcttct 30944272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16543148 - 16542938
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||| ||||||||||||||| ||| |  ||||||||||||| | ||||||||||| ||         ||||||||| ||||||   ||||||||| ||||    
T  16543148 acacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccagtctt 16543049  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    |||||||   ||  |||||| || ||| | ||||| ||||||||  | ||| ||| ||||||||||||||||| ||||| | |||||   ||| ||||||    
T  16543048 ctgcaatcattaaacgagtttgaatccattaaacagcttttgaag-cattatgttgcatctcctgatgaactgcagcttatggtgattttcagtttctga 16542950  T
Q  192 tgaacttgcttc 203  Q
    ||||||| ||||    
T  16542949 tgaactttcttc 16542938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 16622514 - 16622724
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||| ||||||||||||||| ||| |  ||||||||||||| | ||||||||||| ||         ||||||||| ||||||   ||||||||| ||||    
T  16622514 acacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccagtctt 16622613  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    |||||||   ||  |||||| || ||| | ||||| ||||||||  | ||| ||| ||||||||||||||||| ||||| | |||||   ||| ||||||    
T  16622614 ctgcaatcattaaacgagtttgaatccattaaacagcttttgaag-cattatgttgcatctcctgatgaactgcagcttatggtgattttcagtttctga 16622712  T
Q  192 tgaacttgcttc 203  Q
    ||||||| ||||    
T  16622713 tgaactttcttc 16622724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12174469 - 12174411
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctc-tttgaagaatatgcatccaatgcgtt 58  Q
    |||||||||||||||||||| ||| ||||||| ||||| ||| | ||||||||||||||    
T  12174469 acacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgtt 12174411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16112012 - 16111958
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  16112012 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 16111958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23280086 - 23280032
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  23280086 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 23280032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29935486 - 29935432
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||||||| |||||||||| ||||| | |||||||||||    
T  29935486 acacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatgc 29935432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35952816 - 35952762
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||||||||| ||| |||||||||||| ||| |  ||||||||||    
T  35952816 acacttcgtacaaacgtactttgtcaacgctctttgatgaacaaacatccaatgc 35952762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 33605861 - 33605918
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaa 195  Q
    ||||| ||| ||||||||||||||||| ||||||| |||||   ||||||||||||||    
T  33605861 ctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaa 33605918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 9709785 - 9709729
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatga 194  Q
    ||||| ||| ||||||||||||||||| ||||||| |||||   |||||||||||||    
T  9709785 ctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 9709729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48237030 - 48236982
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatc 49  Q
    |||||||||||||  ||||| ||| |||||||||||||||||| |||||    
T  48237030 acacttcgtacaattgtactttgtcaacgctctttgaagaataagcatc 48236982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 1832 - 1632
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |    
T  1832 acacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt 1733  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||| || |||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| |||| ||||||||| || |||||||||    
T  1732 -taggcgagtttgaatccttgaaacaacttttg-aagctttaagttgcatctcctgatgaactgtagcttctggtgaaacacagcttttggtgaacttgc 1635  T
Q  201 ttc 203  Q
    |||    
T  1634 ttc 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 732 - 561
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||| ||||||||||||| ||| |||||||||||||||| | ||||||||||| ||         ||||||||| ||||||   ||||||||| ||||    
T  732 acacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtctt 633  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactg 164  Q
    ||||||| | ||| |||||| || ||| | ||||| ||| ||||  ||||||||| |||||||||||||||||    
T  632 ctgcaatctttagacgagtttgaatccatcaaacagcttctgaag-ctttaagttgcatctcctgatgaactg 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 898 - 697
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||| | |||||||||||| ||||||||||||||| | |||||||||||||    
T  898 acacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatacatttcaaaatagctgttgccatacttttctagtcttctgcaattt 799  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     ||| ||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||| || |||| |||| ||||||||||||||||||||||    
T  798 atagacgagttagagtccttgaaacagcttttg-aaactttaagtttcatctcctgatgaactgcagtttctggtgaaacacagcttctgatgaacttgc 700  T
Q  201 ttc 203  Q
    |||    
T  699 ttc 697  T

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Target: scaffold0387 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 7415 - 7616
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||| ||||||||| |||||||||||| ||||  ||||||||||| ||||||| |||||||||||| ||| || || ||||||| |||||    
T  7415 acacttcgtacaaatgtactatgtcaacgctctttgatgaattagcatccaatgcatttcaaactagccgttgccacactctttcagtcttctgtaattt 7514  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||  ||||||| |||||||| ||||||||||||||||||    
T  7515 ctaggcgagttagagtccttgaaacaacttttgaaaac-ttgagttccatctcttgatgaactaaagcttctggtgatacatagcttctgatgaacttgc 7613  T
Q  201 ttc 203  Q
    |||    
T  7614 ttc 7616  T

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Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 40332115 - 40332315
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  40332115 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgctatacttttccagtcttctgcaattt 40332214  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||| || |||| ||||  |  ||||||| ||||  ||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  40332215 -taggcgagtttgaatcctagaaagcagctttgaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgc 40332313  T
Q  201 tt 202  Q
    ||    
T  40332314 tt 40332315  T

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Target: chr2; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 28550990 - 28550791
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||  ||| | ||||||||||| |||||||||||||    
T  28550990 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagttgtttctatacttttccagtcttctgcaattt 28550891  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||| || ||||||||||| |||||||    ||||| || ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  28550890 -taggcgagtttgaatccttgaaacagcttttgaggt-tttaaattgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgc 28550793  T

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Target: chr2; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 31968115 - 31967915
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||  ||||| ||||||||||| |||||||||||||    
T  31968115 acacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagttgttgctatacttttccagtcttctgcaattt 31968016  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     || ||||||| || |||||||||||||||||| |  ||||||||| ||||| ||||||||||| ||||||| ||||| |||| ||||| ||||||||||    
T  31968015 -tatgcgagtttgaatccttgaaacaacttttg-aggctttaagttgcatcttctgatgaactgcagcttctggtgattcacaacttcttatgaacttgc 31967918  T
Q  201 ttc 203  Q
    |||    
T  31967917 ttc 31967915  T

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Target: chr2; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 22785727 - 22785528
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||| |||| |||||| | |||||||||||    
T  22785727 acactttgtacaaaagtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgctatacatttccagttttctgcaattt 22785628  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     |||||||||| ||   ||||||| | |||||| || ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  22785627 -taggcgagtttgaaatcttgaaatagcttttg-aagctttaagttgcatctcctgatgaactgtagcttctggtgattcacagcttctgatgaacttgc 22785530  T

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Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 1587105 - 1586908
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||  |||||||| || ||||||||||| |    
T  1587105 acacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgcctttcaaaatagccgttgtaatactttttcagtcttctgcaatct 1587006  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttg 199  Q
      ||  ||||| || ||||| |||||||||||| || ||||||||||||||||||||||||||  ||||||| ||||| | ||||||||||||||||||    
T  1587005 tcagatgagtttgaatcctttaaacaacttttg-aagctttaagttccatctcctgatgaactccagcttctggtgattctcagcttctgatgaacttg 1586908  T

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Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22776360 - 22776191
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| | |||| ||||||||    
T  22776360 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgctatacttttcaagtcttttgcaattt 22776261  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttct 172  Q
     |||||||||  ||  ||||||||||||||||| || ||||||||| ||||||||||||||||  |||||||    
T  22776260 -taggcgagtctgaaaccttgaaacaacttttg-aagctttaagttgcatctcctgatgaactacagcttct 22776191  T

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Target: chr2; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22781738 - 22781569
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| | |||| ||||||||    
T  22781738 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgctatacttttcaagtcttttgcaattt 22781639  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttct 172  Q
     |||||||||  ||  ||||||||||||||||| || ||||||||| ||||||||||||||||  |||||||    
T  22781638 -taggcgagtctgaaaccttgaaacaacttttg-aagctttaagttgcatctcctgatgaactacagcttct 22781569  T

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Target: chr2; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 23392740 - 23392570
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    ||||||||||||   |||||| || ||||||||||||  |  | ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||    
T  23392740 acacttcgtacagttgtactaggtcaacgctctttgagaagaaagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgtaattt 23392641  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttct 172  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| || | |||||||||||||||||||    
T  23392640 ctaggcgagttagagtccttgaaacaacttttg-aaactttgagttcaatttactgatgaactgtagcttct 23392570  T

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Target: chr2; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 44840462 - 44840630
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| || || |||||||| |    
T  44840462 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatactttttcagtc-tctgcaatgt 44840560  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttct 172  Q
     |||||||||| || ||||||||||| |||||| || ||||||||| |||||| |||||||||| |||||||    
T  44840561 -taggcgagtttgaatccttgaaacagcttttg-aagctttaagttgcatctcttgatgaactgcagcttct 44840630  T

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Target: chr2; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 3277058 - 3277259
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||||||||| || |||| |||||||||  |||||||| || ||||||||||| |    
T  3277058 acacttcgtacaaacgtactatatcaacgctctttgaagaataagcatccaatgccttccaaattagccgttgttatactttttcagtcttctgcaatct 3277157  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
      || | |||| || | ||| |||||||||||| || |||||||||||||||||| |||||||  ||||||| ||||| | |||||||||||||||||||    
T  3277158 tcagacaagtttgaattctttaaacaacttttg-aagctttaagttccatctcctaatgaactccagcttctagtgattcccagcttctgatgaacttgc 3277256  T
Q  201 ttc 203  Q
    |||    
T  3277257 ttc 3277259  T

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Target: chr2; HSP #11
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 14581543 - 14581667
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||||    
T  14581543 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatatttttccagtcttctgcaattt 14581642  T
Q  101 ctaggcgagttagagtccttgaaaca 126  Q
     ||||||||||  | |||||||||||    
T  14581643 -taggcgagttttaatccttgaaaca 14581667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 34322008 - 34321798
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaa---------aatagccgttgccatacttttccaatctt 91  Q
    ||||||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||||         ||||| |||||| |||||||||||  |||    
T  34322008 acacttcatacaaacgtactatgtcaacgctctttgaagaataagaatccaatgcctttcaatcctttcaaaatagtcgttgctatacttttccaggctt 34321909  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||||| ||||| |||||||   ||||||||| |||||||||||||| |  ||||||| ||||| | ||||||||||    
T  34321908 ctgcaatctttagacgagtttgaatcctttaaacagcttttgagg-ctttaagttgcatctcctgatgaattacagcttctagtgattctcagcttctga 34321810  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  34321809 taaacttgcttc 34321798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 31327942 - 31327827
Alignment:
Q  88 tcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagctt 187  Q
    ||||||||||| | |||||||||| || ||| |  ||||||||||  |||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||    
T  31327942 tcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaagttgcatctcctgatgaactgcagcttctggtgattcacagctt 31327843  T
Q  188 ctgatgaacttgcttc 203  Q
    ||||| ||||||||||    
T  31327842 ctgataaacttgcttc 31327827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 31334663 - 31334548
Alignment:
Q  88 tcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagctt 187  Q
    ||||||||||| | |||||||||| || ||| |  ||||||||||  |||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||    
T  31334663 tcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaagttgcatctcctgatgaactgcagcttctggtgattcacagctt 31334564  T
Q  188 ctgatgaacttgcttc 203  Q
    ||||| ||||||||||    
T  31334563 ctgataaacttgcttc 31334548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 203
Target Start/End: Original strand, 33074322 - 33074464
Alignment:
Q  60 caaaatagccgttgccatacttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatg 159  Q
    |||||||| |||||| ||||||||||| ||||||||||| | ||| |||||| || ||||| ||||| |||||| ||  |||||||| ||||||||||||    
T  33074322 caaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaaacagcttttg-aagttttaagttgcatctcctgatg 33074420  T
Q  160 aactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||  | ||||| ||||| | ||||||||||| ||||||||||    
T  33074421 aactacaacttctagtgattctcagcttctgataaacttgcttc 33074464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 35744068 - 35743864
Alignment:
Q  5 ttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatcttctgc 95  Q
    |||||||||||||||||||| |||||||||||||||||  |||| |||||         | || |||||||| |||||| ||||||||||||| ||||||    
T  35744068 ttcgtacaaacgtactatgtcaacgctctttgaagaattagcattcaatgccttcaaatccttccaaaatagtcgttgctatacttttccaatattctgc 35743969  T
Q  96 aatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaa 195  Q
    ||| | ||| |  ||| |||||  | |||||||||||| |  ||||||||| ||||||||||||||||  ||||||| |||||   ||||||| ||| ||    
T  35743968 aatctttagac--gtttgagtctgttaaacaacttttg-acgctttaagttgcatctcctgatgaactacagcttctggtgattttcagcttccgataaa 35743872  T
Q  196 cttgcttc 203  Q
    ||||||||    
T  35743871 cttgcttc 35743864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 45087256 - 45087044
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| ||||||||||  |||||| ||||| ||||| ||         ||||||||| ||||||   ||||||||| ||||    
T  45087256 acacttcgtacaaacgtactttgtcaacgctcttttgagaataagcatctaatgcattcaaatcctttcaaaatagtcgttgcttcacttttccagtctt 45087157  T
Q  92 ctgcaatttctaggcgagttagagtcct-tgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctg 190  Q
    |||||||   ||| |||| | || |||  | |||||||||||  || ||||||||| ||||  ||||||||||||||||||| ||||||   ||||||||    
T  45087156 ctgcaatccttagacgaggttgaatcccattaaacaactttttgaagctttaagttgcatcctctgatgaactgtagcttctagtgatatttagcttctg 45087057  T
Q  191 atgaacttgcttc 203  Q
    || ||||||||||    
T  45087056 ataaacttgcttc 45087044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22802488 - 22802659
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatc---------caatgcgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| ||| |||||||||||||| |||||         |||  | ||||||||||||| ||||  ||| |||| | ||||    
T  22802488 acacttcgtacaaacgtactttgtcaactctctttgaagaataagcatcatatgccttcaaatcctttcaaaatagccattgctttacctttctagtctt 22802587  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactg 164  Q
    ||||||| | ||| |||||| || ||| | ||| | |||||| || ||||||||| |||||||||||||||||    
T  22802588 ctgcaatctttagacgagtttgaatccattaaatagcttttg-aatctttaagttgcatctcctgatgaactg 22802659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28711770 - 28711716
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||||||||| | | |||||||||||||||| | |||||||||||    
T  28711770 acacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgc 28711716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 20152107 - 20151900
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | ||||||||||         | ||||||| || |||||||   ||||||||| ||||    
T  20152107 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactaaccgttgcttcacttttccagtctt 20152008  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaa-gttccatctcctgatgaactgtagcttcttgtgatacacagcttctg 190  Q
    |||||||   ||| |||| |  | ||| |  ||||||||||| || |||||| ||| ||||||||||||| ||| ||||||| |||||   |||||||||    
T  20152007 ctgcaatgcttagacgagattaaatccattgaacaacttttg-aagctttaatgttgcatctcctgatgagctgcagcttctggtgattttcagcttctg 20151909  T
Q  191 atgaacttg 199  Q
    |||||||||    
T  20151908 atgaacttg 20151900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 30557244 - 30557181
Alignment:
Q  140 ttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||| ||||  ||||||||||| ||||||| ||||||   |||||||||||||||||||||    
T  30557244 ttaagttgcatcctctgatgaactgcagcttctggtgatatttagcttctgatgaacttgcttc 30557181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28701301 - 28701247
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    ||||||||||||||| |||| ||| ||||| |||||||||| | |||||||||||    
T  28701301 acacttcgtacaaacttactttgtcaacgccctttgaagaacaagcatccaatgc 28701247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6392662 - 6392719
Alignment:
Q  2 cacttcgtacaaacgtactatgttaacgctc-tttgaagaatatgcatccaatgcgtt 58  Q
    ||||||||||||||||||| ||| ||||||| ||||| ||| | ||||||||||||||    
T  6392662 cacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgtt 6392719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 6574049 - 6573984
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| ||| ||||| ||||||||||| | ||||| |||||   ||||||||||||||||||||||    
T  6574049 ctttatgttgcatcttctgatgaactgcaacttctagtgattttcagcttctgatgaacttgcttc 6573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19540444 - 19540496
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaat 53  Q
    |||||||||||||  ||||||||| |||||||||| ||||| | |||||||||    
T  19540444 acacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaat 19540496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 22317623 - 22317675
Alignment:
Q  3 acttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  22317623 acttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 22317675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 5393 - 5209
Alignment:
Q  9 tacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcga 108  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||| || |||||| ||||||||||| | |||||||    
T  5393 tacatacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagctgttgccacacatttccagtcttctgcaatctttaggcga 5294  T
Q  109 gttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatga 194  Q
    |||||||||||| ||||| |||||| ||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||    
T  5293 gttagagtccttaaaacagcttttg-aaactataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatga 5209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 87677 - 87516
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||| || |||||||||||||    
T  87677 acacttcgtacagacgtactatgtcaacgctctttgaagaatttgcatccaatgcatttcaaaatagtcgttgccatactttttcagtcttctgcaattt 87578  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaact 163  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||| |||||||||| ||||    
T  87577 ctaggcaagttagagtccttgaaacagcttttg-aaactttaagttcaatctcctgataaact 87516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17842 - 17642
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaattt 100  Q
    ||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||||||| |||||| ||||||||  | ||||||||||| |    
T  17842 acacttcatacaaacgtactatgtcaacgctctttgaaggataagcatccaatgcctttcaaaatagacgttgctatacttttgtagtcttctgcaatct 17743  T
Q  101 ctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgc 200  Q
     ||| |||||| || ||||||||||| |||||| || |||||||||  ||||||||||||| || ||||||| ||||| |||||||||||||||||||||    
T  17742 -tagacgagtttgaatccttgaaacagcttttg-aagctttaagttgtatctcctgatgaattgaagcttctggtgattcacagcttctgatgaacttgc 17645  T
Q  201 ttc 203  Q
    |||    
T  17644 ttc 17642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 11448 - 11604
Alignment:
Q  45 gcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaag 144  Q
    ||||||||||| ||||||| |||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| || ||    
T  11448 gcatccaatgcatttcaaactagccgttgccacactcttccagtcttctgtaatttctaggcgagttagagtccttgaaacaaattttgaaaac-ttgag 11546  T
Q  145 ttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgctt 202  Q
    ||||||||| |||||||||| ||||||| |||||||| ||||| ||||||||||||||    
T  11547 ttccatctcttgatgaactgcagcttctggtgatacatagcttatgatgaacttgctt 11604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 203
Target Start/End: Complemental strand, 2735 - 2579
Alignment:
Q  45 gcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaag 144  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||| || ||||||||||| |||||| |||||||| |    
T  2735 gcatccaatgcttttcaaaatagccgttgctatacttttccagtcttctgcaattt-taggcgagtttgaatccttgaaacagcttttg-aaactttagg 2638  T
Q  145 ttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    || ||| ||||||||||||| || |||| |||||  |||||||||||||||||||||||    
T  2637 ttgcatttcctgatgaactgcagtttctggtgatttacagcttctgatgaacttgcttc 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 7966 - 8175
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcg---------tttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||          ||||||||||| |||||| ||||||||||| ||||    
T  7966 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcgaatgcaattcaatcctttcaaaatagtcgttgctatacttttccagtctt 8065  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||||||||||| |||||| || ||||||||| ||||| ||||||||||| ||||||| ||||| ||||||  ||||    
T  8066 ctgcaatct-tagacgagtttgaatccttgaaacagcttttg-aagctttaagttacatcttctgatgaactgcagcttctggtgattcacagccactga 8163  T
Q  192 tgaacttgcttc 203  Q
    || || ||||||    
T  8164 tgtacgtgcttc 8175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 16 - 112
Alignment:
Q  106 cgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||| || ||||||||||| ||||||||  ||||||||| ||||| ||||||||||| ||||||| ||||| ||||||  |||||| || ||||||    
T  16 cgagtttgaatccttgaaacagcttttgaag-ctttaagttacatcttctgatgaactgcagcttctggtgattcacagccactgatgtacgtgcttc 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 9594 - 9803
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcg---------tttcaaaatagccgttgccatacttttccaatctt 91  Q
    ||||||||||||  |||||||||| |||||| |||| |||||| |||||||||||          ||||||||||| |||||| ||||||| ||| ||||    
T  9594 acacttcgtacagtcgtactatgtcaacgctgtttgtagaataagcatccaatgcccttcaatcctttcaaaatagtcgttgctatactttcccagtctt 9693  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| | |||| || ||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||| ||||| |||||||| |||    
T  9694 ctgcaatct-tagacaagtttgaatccttgaaacaacttttgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttatga 9791  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  9792 tgaacttgcttc 9803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22208 - 21998
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt--------tcaaa-atagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||| ||        ||||| |||| |||||| |||||| |||| ||||    
T  22208 acacttcgtacaaacgtattatgtcaacgctcattgaagaataagcatccaatgccttccaatccttcaaagatagtcgttgctatacttctccagtctt 22109  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| ||||||  | ||||| ||||||||||||||  ||||||||| ||||| || |||||||  | ||||| ||||| ||||||||||||    
T  22108 ctgcaatctttagacgagttttaatcctttaaacaacttttgaac-ctttaagttgcatcttctaatgaactacaacttctggtgattcacagcttctga 22010  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  22009 taaacttgcttc 21998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 3338 - 3548
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    |||||| ||||||||||||||| | ||||||||||||||||||  |||||||||| ||          ||||||||||||||  ||||||||||||||||    
T  3338 acactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaaatagccgttgttatacttttccaatctt 3437  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||| ||||||||  ||||||||| |||||||||||||||| |||||||| |||||   ||||||||||    
T  3438 ctgcaatctttagacgagtttgaatccgttaaacagcttttgaag-ctttaagttgcatctcctgatgaactatagcttctggtgattttcagcttctga 3536  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  3537 taaacttgcttc 3548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7233 - 7023
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaa---------aatagccgttgccatacttttccaatctt 91  Q
    ||||||||||||||||||| |||| |||| | ||||||||||| ||||||||||| || |||         ||||| |||||| ||||||||||| ||||    
T  7233 acacttcgtacaaacgtaccatgtcaacgttgtttgaagaataagcatccaatgctttccaatccttccaaaatagtcgttgctatacttttccagtctt 7134  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| |  || || ||| || ||||| ||||| ||||||||  ||||||||| ||||||||||||||||  ||||||| ||||| ||||||||||||    
T  7133 ctgcaatcttcagacgggtttgaatccttcaaacagcttttgaag-ctttaagttgcatctcctgatgaactacagcttctggtgattcacagcttctga 7035  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  7034 tgaacttgcttc 7023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 60837 - 61047
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtttcaa---------aatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||| |||||| || |||         |||||||||||| ||||||||||| ||||    
T  60837 acacttcgtacaaacgtactatgtcaacgctctttgaagaacaagcattcaatgccttccaatccttccaaaatagccgttgctatacttttccagtctt 60936  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||||| ||| ||||||  | ||||| |||||||||||| ||  |||||||| ||||||||||||||||  | ||||| ||||| | || |||||||    
T  60937 ctgcaatttttagacgagtttaaatcctttaaacaacttttg-aagttttaagttgcatctcctgatgaactacaacttctggtgattctcaacttctga 61035  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  61036 taaacttgcttc 61047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 71; Significance: 2e-32; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 65440 - 65296
Alignment:
Q  57 tttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctg 156  Q
    ||||||||||| |||| | ||||||||||| ||||||||||| | ||| |||||| || ||||||||| | ||||||||  ||||||||| |||||||||    
T  65440 tttcaaaatagtcgtttctatacttttccagtcttctgcaatct-tagacgagtttgaatccttgaaatagcttttgaag-ctttaagttgcatctcctg 65343  T
Q  157 atgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  65342 atgaactgcagcttctggtgattcacagcttctgatgaacttgcttc 65296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 144485 - 144341
Alignment:
Q  57 tttcaaaatagccgttgccatacttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctg 156  Q
    |||||||| || |||||| ||||||||||| ||||||||||| | ||| |||||| || ||||||||| | ||||||||  ||||||||| |||||||||    
T  144485 tttcaaaacagtcgttgctatacttttccagtcttctgcaatct-tagacgagtttgaatccttgaaatagcttttgaag-ctttaagttgcatctcctg 144388  T
Q  157 atgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  144387 atgaactgcagcttctggtgattcacagcttctgatgaacttgcttc 144341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 165023 - 164969
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||| ||||||| ||| |||||||||||||| ||| |||||||||||    
T  165023 acacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgc 164969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 9189 - 9398
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||         | || |||||||| |||||| ||||||||||||||||    
T  9189 acacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttctaatccttccaaaatagtcgttgctatacttttccaatctt 9288  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | | |  ||||| || ||| | ||||| |||||| || ||||||||| ||||||||||||||||  | ||||| ||||| | ||||||||||    
T  9289 ctgcaatct-ttgatgagtttgaatccgttaaacagcttttg-aagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctga 9386  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  9387 taaacttgcttc 9398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 23551 - 23431
Alignment:
Q  80 ttttccaatcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgata 179  Q
    ||||||| ||||||||||| | ||| |||||| || ||||||||||| ||||||||  ||||||||| ||||||||||||||||| ||||||| |||||     
T  23551 ttttccagtcttctgcaatct-tagacgagtttgaatccttgaaacagcttttgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgatt 23454  T
Q  180 cacagcttctgatgaacttgctt 202  Q
    |||||||||||||||||||||||    
T  23453 cacagcttctgatgaacttgctt 23431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25476 - 25434
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaata 43  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  25476 acacttcgtacaaacgtactatgtcaacactctttgaagaata 25434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 246214 - 246114
Alignment:
Q  102 taggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgct 201  Q
    |||||||||| || ||||||||||||||||||||  ||||||||| ||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||    
T  246214 taggcgagtttgaatccttgaaacaacttttgaag-ctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgct 246116  T
Q  202 tc 203  Q
    ||    
T  246115 tc 246114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 215574 - 215364
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| |||||||||||||||| | ||||||||||| ||         ||||||||||||||||   ||||||| | ||||    
T  215574 acacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagccgttgcttcacttttctagtctt 215475  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || ||| | ||||| ||||||||   |||||||| ||||||||||| ||||| ||||||| |||||   | ||||||||    
T  215474 ctgcaatctttagacgagtttgaatccattaaacagcttttgaagt-tttaagttgcatctcctgataaactgcagcttctggtgattttcggcttctga 215376  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  215375 taaacttgcttc 215364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 211434 - 211599
Alignment:
Q  3 acttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg---------cgtttcaaaatagccgttgccatacttttccaatcttct 93  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||| ||||         | || |||||||| |||||| ||||||||||| ||||||    
T  211434 acttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcattaaaatccttacaaaatagtcgttgctatacttttccagtcttct 211533  T
Q  94 gcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatga 160  Q
    ||||| | ||| |||||| || ||| | |||||||||||| || ||||||| | |||||||||||||    
T  211534 gcaatctttagacgagtttgaatccgttaaacaacttttg-aagctttaagctgcatctcctgatga 211599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 6817 - 6607
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| || ||||||||||||| | ||||||||||| ||         ||||||||| || |||   ||||||||| ||||    
T  6817 acacttcgtacaaacgtactttgtcaatgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcggtgcttcacttttccagtctt 6718  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    |||||||   ||| | |||| || ||| | ||||| ||||||||  ||||||||| ||||||||||||||||  ||||||| ||||| | ||||||||||    
T  6717 ctgcaatccttagacaagtttgaatccgttaaacagcttttgaag-ctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctga 6619  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  6618 taaacttgcttc 6607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 78443 - 78233
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||| ||| |||||||||| ||||||| ||||||||||| ||         ||||||||| ||||||   ||||||||| ||||    
T  78443 acacttcgtacaaacgtactttgtcaacgctctttaaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtctt 78344  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    ||||||| | ||| |||||| || |||   ||| | ||||||||  ||||||| | |||||| |||||||||  ||||||| ||||| | ||| ||||||    
T  78343 ctgcaatctttagacgagtttgaatccgataaatagcttttgaag-ctttaagctgcatctcatgatgaactacagcttctggtgattctcagattctga 78245  T
Q  192 tgaacttgcttc 203  Q
    ||||||||||||    
T  78244 tgaacttgcttc 78233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2807 - 2702
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatg--------cgtttcaaaatagccgttgccatacttttccaatcttc 92  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||        | || |||||||| |||||| ||||||||||| |||||    
T  2807 acacttcgtacaaacgtactatgtcaacactctttgaagaatacgcatccaatgctttccaaccttccaaaatagtcgttgcaatacttttccagtcttc 2708  T
Q  93 tgcaat 98  Q
    ||||||    
T  2707 tgcaat 2702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 1613 - 1550
Alignment:
Q  135 aaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaactt 198  Q
    |||||||| ||| ||||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  1613 aaactttaggttgcatcttctgatgaactatagcttctggtgatacacagcttctgatgaactt 1550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 20328 - 20265
Alignment:
Q  135 aaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaactt 198  Q
    |||||||| |||  |||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  20328 aaactttaggttgtatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactt 20265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 758 - 831
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc-gtttcaaaatagccgttg 73  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||| |||||||||||  |||||||||||||||||    
T  758 acacttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgctttttcaaaatagccgttg 831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 89987 - 89922
Alignment:
Q  138 ctttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||| ||||||||||||||||| ||||||| |||||   ||||||||||||||||||||||    
T  89987 ctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttc 89922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 5679 - 5466
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    ||||||| || ||| ||||| ||| |||||||||||||||||| ||||| ||||| ||         |||||||||  |||||  |||||||||| ||||    
T  5679 acacttcatataaatgtactttgtcaacgctctttgaagaataagcatcaaatgccttcaaatcctttcaaaatagttgttgctttacttttccagtctt 5580  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaa---ctgtagcttcttgtgatacacagcttc 188  Q
    ||||||| | ||| |||||| || ||| | |||||||||||| || |||||| || ||||| ||||||||   | | ||||||| ||||| | |||||||    
T  5579 ctgcaatctttagacgagtttgaatccattaaacaacttttg-aatctttaaattgcatcttctgatgaacagcagcagcttctggtgattctcagcttc 5481  T
Q  189 tgatgaacttgcttc 203  Q
    |||| ||||||||||    
T  5480 tgataaacttgcttc 5466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 35406 - 35461
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||| |||||||| |||||||||| |||||| |||||||||||||||||||||||    
T  35406 catcttctgatgaattgtagcttctagtgatatacagcttctgatgaacttgcttc 35461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 11921 - 11989
Alignment:
Q  135 aaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||| | ||| ||||| ||||||||||||||||||| |||||| ||| ||| |||||||||||||||    
T  11921 aaacttcaggttgcatcttctgatgaactgtagcttctggtgatatacaacttttgatgaacttgcttc 11989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 99282 - 99075
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgttt---------caaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||||||||||||||||| | ||||  |||||||||| ||||||||||| ||          |||||||| |||||| ||||||||||  || |    
T  99282 acacttcgtacaaacgtactatgtcagcgct--ttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccggtcat 99185  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctga 191  Q
    |||||| || ||| |||||| || ||| | ||||| ||||||||  ||||||||| ||  ||||||||||||  | ||||| |||||   ||||||||||    
T  99184 ctgcaactt-tagacgagtttgaatccgttaaacagcttttgaag-ctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctga 99087  T
Q  192 tgaacttgcttc 203  Q
    | ||||||||||    
T  99086 taaacttgcttc 99075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 422 - 368
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||| ||||||| ||| |||||||||||||| ||| |||||||||||    
T  422 acacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgc 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 10774 - 10954
Alignment:
Q  21 atgttaacgctctttgaagaatatgcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaat--ttctaggcgagttagagtcc 118  Q
    |||| |||||||||||| ||  | |||||| |||| ||||||| || |||||| || ||||| | | |||||||||||  |||| || ||| | || |||    
T  10774 atgtcaacgctctttgaggataaagcatcctatgcttttcaaactatccgttgtca-actttccaagtcttctgcaatctttct-ggtgagcttgaatcc 10871  T
Q  119 ttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    |||||||||||||||||  ||||| |||  ||||  |||| | ||| ||||||| |||||||||| |||||||||||||||||||    
T  10872 ttgaaacaacttttgaag-ctttaggttg-atcttatgataatctgcagcttctggtgatacacaacttctgatgaacttgcttc 10954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 20699 - 20855
Alignment:
Q  45 gcatccaatgcgtttcaaaatagccgttgccatacttttccaatcttctgcaat--ttctaggcgagttagagtccttgaaacaacttttgaaaacttta 142  Q
    ||||||||||| ||||||| ||||||||| || ||||| | | |||||||||||  |||| || ||| | || ||||||||||||||||||||  |||||    
T  20699 gcatccaatgcttttcaaactagccgttgtca-actttcctagtcttctgcaatctttct-ggtgagcttgaatccttgaaacaacttttgaag-cttta 20795  T
Q  143 agttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
      ||  ||||  |||| | ||| ||||||| |||||||||| |||||||||||||||||||    
T  20796 gattg-atcttatgataatctgcagcttctggtgatacacaacttctgatgaacttgcttc 20855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 38020 - 37959
Alignment:
Q  134 aaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacagcttctgatgaa 195  Q
    ||||||||| ||| |||||||||||||||| ||| |||| |||||| |||||||| ||||||    
T  38020 aaaactttaggttgcatctcctgatgaactatagtttctggtgatatacagcttccgatgaa 37959  T

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Target: scaffold0132; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38162 - 38108
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||  ||||||| ||| |||||||||||||| ||| |||||||||||    
T  38162 acacttcgtacggacgtactttgtcaacgctctttgaaggataagcatccaatgc 38108  T

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Target: scaffold1331 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 1776 - 1598
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgcgtt---------tcaaaatagccgttgccatacttttccaatctt 91  Q
    |||||||||| ||||||||| ||| |||||||||||||||| |  |||||| ||| ||         ||||||||| ||||||   ||||||| | ||||    
T  1776 acacttcgtaaaaacgtactttgtcaacgctctttgaagaacaatcatccagtgccttcaaatcctttcaaaatagtcgttgcttcacttttcaagtctt 1677  T
Q  92 ctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttc 171  Q
    ||||||| | ||  |||||| || ||| | ||||| ||||||||  |||| |||| ||||||||||||||||| ||||||    
T  1676 ctgcaatatttaaacgagtttgaatccattaaacagcttttgaag-ctttgagttgcatctcctgatgaactgcagcttc 1598  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 39616 - 39671
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||||  ||||||| |||||   ||||||||||||||||||||||    
T  39616 catctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttc 39671  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 137676 - 137731
Alignment:
Q  148 catctcctgatgaactgtagcttcttgtgatacacagcttctgatgaacttgcttc 203  Q
    ||||||||||||||||  ||||||| |||||   ||||||||||||||||||||||    
T  137676 catctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttc 137731  T

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Target: scaffold0771 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 6293 - 6355
Alignment:
Q  122 aaacaacttttgaaaactttaagttccatctcctgatgaactgtagcttcttgtgatacacag 184  Q
    |||||||| ||  |||||||| ||| ||||| || |||||||||||||||| |||||||||||    
T  6293 aaacaactatttgaaactttaggttgcatcttctcatgaactgtagcttctggtgatacacag 6355  T

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Target: scaffold0220 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1874 - 1820
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||| | ||||||| ||| |||||||||||||| ||| |||||||||||    
T  1874 acacttcgtatagacgtactttgtcaacgctctttgaaggataagcatccaatgc 1820  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 103606 - 103660
Alignment:
Q  1 acacttcgtacaaacgtactatgttaacgctctttgaagaatatgcatccaatgc 55  Q
    |||||||||||||  ||||| ||| |||||||||||||||| | |||||||||||    
T  103606 acacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 103660  T

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