View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10333_low_5 (Length: 245)

Name: NF10333_low_5
Description: NF10333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10333_low_5
NF10333_low_5
[»] chr3 (33 HSPs)
chr3 (66-146)||(21783586-21783666)
chr3 (1-45)||(13948871-13948915)
chr3 (1-45)||(29118629-29118673)
chr3 (1-42)||(23458070-23458111)
chr3 (1-42)||(26463723-26463764)
chr3 (1-42)||(29118832-29118873)
chr3 (1-42)||(40758406-40758447)
chr3 (1-42)||(46475077-46475118)
chr3 (1-41)||(10307670-10307710)
chr3 (1-41)||(11910790-11910830)
chr3 (1-41)||(32306515-32306555)
chr3 (1-45)||(41422063-41422107)
chr3 (1-41)||(52032229-52032269)
chr3 (1-40)||(3469291-3469330)
chr3 (1-40)||(21185993-21186032)
chr3 (1-39)||(42343030-42343068)
chr3 (1-42)||(2796410-2796451)
chr3 (1-42)||(33689472-33689513)
chr3 (1-42)||(35643942-35643983)
chr3 (1-42)||(36417984-36418025)
chr3 (1-42)||(37778567-37778608)
chr3 (1-42)||(40033597-40033638)
chr3 (1-42)||(40788714-40788755)
chr3 (5-42)||(43384579-43384616)
chr3 (1-42)||(47551584-47551625)
chr3 (1-42)||(51994042-51994083)
chr3 (1-42)||(55052370-55052411)
chr3 (1-41)||(3469495-3469535)
chr3 (1-41)||(3596200-3596240)
chr3 (1-41)||(32306719-32306759)
chr3 (1-45)||(36417779-36417823)
chr3 (1-41)||(43998236-43998276)
chr3 (1-41)||(53757020-53757060)
[»] chr7 (31 HSPs)
chr7 (66-147)||(43123363-43123444)
chr7 (1-45)||(25628769-25628813)
chr7 (1-45)||(42618202-42618246)
chr7 (1-42)||(2640269-2640310)
chr7 (1-42)||(6571244-6571285)
chr7 (1-42)||(17886786-17886827)
chr7 (1-42)||(25628569-25628610)
chr7 (1-42)||(37657146-37657187)
chr7 (1-42)||(42731715-42731756)
chr7 (1-45)||(6253733-6253777)
chr7 (1-41)||(25453219-25453259)
chr7 (1-41)||(32934439-32934479)
chr7 (1-45)||(32934639-32934683)
chr7 (1-45)||(33828265-33828309)
chr7 (1-41)||(43266561-43266601)
chr7 (1-41)||(46205604-46205644)
chr7 (1-39)||(28469101-28469139)
chr7 (4-42)||(46204515-46204553)
chr7 (1-42)||(17102285-17102326)
chr7 (1-42)||(22081650-22081691)
chr7 (1-42)||(22827085-22827126)
chr7 (1-42)||(22871399-22871440)
chr7 (1-38)||(23058520-23058557)
chr7 (1-42)||(24389081-24389122)
chr7 (1-42)||(27992004-27992045)
chr7 (1-42)||(32068390-32068431)
chr7 (1-42)||(32688514-32688555)
chr7 (1-45)||(10600240-10600284)
chr7 (1-45)||(28890670-28890714)
chr7 (1-41)||(42618002-42618042)
chr7 (1-45)||(43266357-43266401)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-45)||(1011-1055)
[»] chr6 (18 HSPs)
chr6 (1-45)||(31407169-31407213)
chr6 (1-48)||(12065311-12065358)
chr6 (1-42)||(21627804-21627845)
chr6 (1-42)||(21836324-21836365)
chr6 (1-42)||(30726055-30726096)
chr6 (1-42)||(30804157-30804198)
chr6 (1-42)||(33517830-33517871)
chr6 (1-41)||(6517593-6517633)
chr6 (1-41)||(7160895-7160935)
chr6 (1-45)||(12080929-12080973)
chr6 (1-45)||(15913839-15913883)
chr6 (1-39)||(11435968-11436006)
chr6 (1-42)||(17734287-17734328)
chr6 (1-42)||(22502865-22502906)
chr6 (1-42)||(30337714-30337755)
chr6 (1-45)||(7905334-7905378)
chr6 (1-45)||(14196706-14196750)
chr6 (1-41)||(31406969-31407009)
[»] chr4 (37 HSPs)
chr4 (1-45)||(27891675-27891719)
chr4 (1-45)||(51692812-51692856)
chr4 (66-147)||(55866297-55866379)
chr4 (1-42)||(10408183-10408224)
chr4 (1-42)||(14802031-14802072)
chr4 (1-42)||(27069001-27069042)
chr4 (1-42)||(46661210-46661251)
chr4 (1-42)||(51859498-51859539)
chr4 (1-42)||(52573319-52573360)
chr4 (1-42)||(54858651-54858692)
chr4 (1-41)||(1178134-1178174)
chr4 (1-45)||(5818066-5818110)
chr4 (1-45)||(8438371-8438415)
chr4 (1-45)||(34765471-34765515)
chr4 (1-45)||(52909546-52909590)
chr4 (1-41)||(54858855-54858895)
chr4 (1-40)||(8439522-8439561)
chr4 (1-40)||(22718030-22718069)
chr4 (1-40)||(22987147-22987186)
chr4 (1-39)||(37976244-37976282)
chr4 (1-42)||(7452099-7452140)
chr4 (1-42)||(13058278-13058319)
chr4 (1-42)||(17356016-17356057)
chr4 (1-42)||(30642442-30642483)
chr4 (1-42)||(39701203-39701244)
chr4 (1-42)||(44967160-44967201)
chr4 (1-42)||(49879298-49879339)
chr4 (1-42)||(50418759-50418800)
chr4 (1-42)||(50503916-50503957)
chr4 (1-42)||(53129597-53129638)
chr4 (1-42)||(54086786-54086827)
chr4 (1-45)||(9400610-9400654)
chr4 (1-41)||(10407980-10408020)
chr4 (1-41)||(36008935-36008975)
chr4 (1-41)||(45463164-45463204)
chr4 (1-41)||(50504120-50504160)
chr4 (1-41)||(51859701-51859741)
[»] chr2 (21 HSPs)
chr2 (1-45)||(13692513-13692557)
chr2 (1-45)||(36755381-36755425)
chr2 (1-42)||(15604633-15604674)
chr2 (1-42)||(15848384-15848425)
chr2 (1-42)||(34448091-34448132)
chr2 (1-42)||(44713886-44713927)
chr2 (1-41)||(8342278-8342318)
chr2 (4-42)||(22051088-22051126)
chr2 (1-42)||(6658143-6658184)
chr2 (1-42)||(8710762-8710803)
chr2 (1-42)||(10713019-10713060)
chr2 (1-42)||(11163145-11163186)
chr2 (1-42)||(16099320-16099361)
chr2 (1-42)||(36382423-36382464)
chr2 (1-42)||(36480014-36480055)
chr2 (1-42)||(37895438-37895479)
chr2 (1-42)||(39423811-39423852)
chr2 (1-42)||(41588352-41588393)
chr2 (1-41)||(15604430-15604470)
chr2 (1-41)||(28226039-28226079)
chr2 (1-45)||(41587325-41587369)
[»] chr1 (43 HSPs)
chr1 (1-45)||(35152636-35152680)
chr1 (1-43)||(37929509-37929551)
chr1 (1-42)||(1841755-1841796)
chr1 (1-42)||(6367858-6367899)
chr1 (1-42)||(14879267-14879308)
chr1 (1-42)||(40210461-40210502)
chr1 (1-42)||(48779415-48779456)
chr1 (1-45)||(7821247-7821291)
chr1 (1-45)||(8898608-8898652)
chr1 (1-45)||(12905950-12905994)
chr1 (1-41)||(13914159-13914199)
chr1 (1-41)||(20760800-20760840)
chr1 (1-45)||(24009666-24009710)
chr1 (1-41)||(31051041-31051081)
chr1 (1-41)||(35040909-35040949)
chr1 (1-45)||(36694373-36694417)
chr1 (1-45)||(36710474-36710518)
chr1 (1-41)||(40714738-40714778)
chr1 (1-45)||(41099026-41099070)
chr1 (1-40)||(49955643-49955682)
chr1 (1-39)||(17661942-17661980)
chr1 (105-147)||(25065804-25065846)
chr1 (3-45)||(43759115-43759157)
chr1 (1-42)||(183312-183353)
chr1 (1-42)||(1103757-1103798)
chr1 (1-42)||(4960805-4960846)
chr1 (1-42)||(7371381-7371422)
chr1 (1-42)||(7821045-7821086)
chr1 (1-42)||(19017720-19017761)
chr1 (1-42)||(26024688-26024729)
chr1 (1-42)||(28324895-28324936)
chr1 (1-42)||(30711623-30711664)
chr1 (1-42)||(34464540-34464581)
chr1 (1-42)||(35038546-35038587)
chr1 (1-42)||(37578283-37578324)
chr1 (1-42)||(40714535-40714576)
chr1 (1-42)||(49723022-49723063)
chr1 (1-42)||(49955438-49955479)
chr1 (1-41)||(8898812-8898852)
chr1 (1-45)||(28011630-28011674)
chr1 (1-41)||(28325099-28325139)
chr1 (1-45)||(35473722-35473766)
chr1 (1-41)||(45749933-45749973)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-42)||(11231-11272)
scaffold0328 (1-42)||(11434-11475)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-42)||(12074-12115)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-42)||(222083-222124)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-42)||(37655-37696)
[»] chr8 (32 HSPs)
chr8 (1-42)||(8316744-8316785)
chr8 (1-42)||(15230225-15230266)
chr8 (1-42)||(23663636-23663677)
chr8 (1-42)||(36928772-36928813)
chr8 (1-42)||(38862859-38862900)
chr8 (1-42)||(39071938-39071979)
chr8 (1-42)||(42945205-42945246)
chr8 (1-45)||(8997980-8998024)
chr8 (1-45)||(12199041-12199085)
chr8 (1-45)||(12443469-12443513)
chr8 (1-45)||(34685551-34685595)
chr8 (1-45)||(35634390-35634434)
chr8 (1-41)||(37542520-37542560)
chr8 (1-45)||(41353864-41353908)
chr8 (1-42)||(2535846-2535887)
chr8 (1-42)||(10445629-10445670)
chr8 (1-42)||(12273009-12273050)
chr8 (1-42)||(25124654-25124695)
chr8 (1-42)||(34061624-34061665)
chr8 (1-42)||(34177266-34177307)
chr8 (1-42)||(35756878-35756919)
chr8 (1-42)||(42945408-42945449)
chr8 (1-42)||(44664599-44664640)
chr8 (1-41)||(234035-234075)
chr8 (1-41)||(710446-710486)
chr8 (1-41)||(747658-747698)
chr8 (1-41)||(871553-871593)
chr8 (1-41)||(6471985-6472025)
chr8 (1-41)||(15230022-15230062)
chr8 (1-45)||(27500379-27500423)
chr8 (1-41)||(38003546-38003586)
chr8 (1-45)||(38955965-38956009)
[»] chr5 (37 HSPs)
chr5 (1-42)||(5994185-5994226)
chr5 (1-42)||(6150716-6150757)
chr5 (1-42)||(8322700-8322741)
chr5 (1-42)||(11047733-11047774)
chr5 (1-42)||(13362318-13362359)
chr5 (1-42)||(14194514-14194555)
chr5 (1-42)||(16156946-16156987)
chr5 (1-42)||(28269513-28269554)
chr5 (1-42)||(39453595-39453636)
chr5 (1-42)||(43159110-43159151)
chr5 (1-45)||(186712-186756)
chr5 (1-45)||(5255108-5255152)
chr5 (1-45)||(17544339-17544383)
chr5 (1-41)||(20152872-20152912)
chr5 (1-45)||(38442360-38442404)
chr5 (1-48)||(11741807-11741854)
chr5 (1-40)||(33871430-33871469)
chr5 (1-39)||(35920319-35920357)
chr5 (1-42)||(3528964-3529005)
chr5 (1-42)||(6301839-6301880)
chr5 (1-42)||(8875540-8875581)
chr5 (1-42)||(11762013-11762054)
chr5 (1-42)||(13963125-13963166)
chr5 (1-42)||(17202695-17202736)
chr5 (1-42)||(19892399-19892440)
chr5 (1-42)||(20153212-20153253)
chr5 (1-42)||(20814226-20814267)
chr5 (1-42)||(21265234-21265275)
chr5 (1-42)||(27587411-27587452)
chr5 (1-42)||(27937144-27937185)
chr5 (1-42)||(32242538-32242579)
chr5 (1-42)||(33871632-33871673)
chr5 (1-42)||(38475124-38475165)
chr5 (2-42)||(5024111-5024151)
chr5 (1-45)||(17544139-17544183)
chr5 (1-41)||(21287834-21287874)
chr5 (1-41)||(22298633-22298673)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-41)||(2484-2524)
[»] scaffold0347 (1 HSPs)
scaffold0347 (101-147)||(14463-14509)
[»] scaffold0295 (1 HSPs)
scaffold0295 (1-42)||(2439-2480)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-42)||(69261-69302)


Alignment Details
Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 21783586 - 21783666
Alignment:
Q  66 ggactaaaatacccctgagctttacagacaaatgtgaaaagaccattaagcccatgtgttcatcttctcaaaatcttccct 146  Q
    |||| ||||||||| ||| ||| |||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  21783586 ggacgaaaatacccttgaacttcacagacaaatgtgaaaagaccattatacccatgtgttcatcttcttaaaatcttccct 21783666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13948871 - 13948915
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  13948871 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 13948915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29118629 - 29118673
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  29118629 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 29118673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23458070 - 23458111
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  23458070 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 23458111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26463723 - 26463764
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  26463723 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 26463764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29118873 - 29118832
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  29118873 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 29118832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40758447 - 40758406
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  40758447 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 40758406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46475118 - 46475077
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  46475118 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 46475077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10307710 - 10307670
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  10307710 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 10307670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11910790 - 11910830
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  11910790 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 11910830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32306515 - 32306555
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  32306515 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 32306555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41422063 - 41422107
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  41422063 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtca 41422107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52032229 - 52032269
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  52032229 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 52032269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3469291 - 3469330
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcac 40  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  3469291 ttaatcatttaaaatttcgtcctttgaccaacttaatcac 3469330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21186032 - 21185993
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcac 40  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  21186032 ttaatcatttaaaatttcgtcccttgacccacttaatcac 21185993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42343068 - 42343030
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatca 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  42343068 ttaatcatttaaaatttcgtcctttgaccaacttaatca 42343030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2796451 - 2796410
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||| ||||||||||||||  ||||||||||||||||||    
T  2796451 ttaatcagttaaaatttcgtcctttgaccaacttaatcactg 2796410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33689472 - 33689513
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  33689472 ttaatcatttaaaattttgtcctttgaccaacttaatcactg 33689513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35643942 - 35643983
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  |||| |||||||||||||    
T  35643942 ttaatcatttaaaatttcgtcctttgacaaacttaatcactg 35643983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36418025 - 36417984
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  |||| |||||||||||||    
T  36418025 ttaatcatttaaaatttcgtcctttgacaaacttaatcactg 36417984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37778608 - 37778567
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||| |||  ||||||||||||||||||    
T  37778608 ttaatcatttaaaatttcatcctttgaccaacttaatcactg 37778567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40033597 - 40033638
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  40033597 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 40033638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40788755 - 40788714
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||| |||||||||||||||  ||||||||||||||||||    
T  40788755 ttaatcttttaaaatttcgtcctttgaccaacttaatcactg 40788714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 43384616 - 43384579
Alignment:
Q  5 tcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  43384616 tcatttaaaatttcgtcctttgaccaacttaatcactg 43384579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47551584 - 47551625
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||| |||  ||||||||||||||||||    
T  47551584 ttaatcatttaaaatttcatcctttgaccaacttaatcactg 47551625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51994042 - 51994083
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  51994042 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 51994083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 55052370 - 55052411
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  55052370 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 55052411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3469535 - 3469495
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||| |||||  |||||||||||||||||    
T  3469535 ttaatcatttaaaattccgtcctttgaccaacttaatcact 3469495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3596200 - 3596240
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||||| |  |||||||||||||||||    
T  3596200 ttaatcatttaaaatttcgttctttgaccaacttaatcact 3596240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32306759 - 32306719
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||||||   |||||||||||||||||    
T  32306759 ttaatcatttaaaatttcgtcatttgaccaacttaatcact 32306719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36417779 - 36417823
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||| ||||||||||| ||||    
T  36417779 ttaatcatttaaaatttcgtcctttgacaaacttaatcaccgtca 36417823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43998236 - 43998276
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||||||   |||||||||||||||||    
T  43998236 ttaatcatttaaaatttcgtcatttgaccaacttaatcact 43998276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 53757060 - 53757020
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  | |||||||||||||||    
T  53757060 ttaatcatttaaaatttcgtcctttaaccaacttaatcact 53757020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 43123363 - 43123444
Alignment:
Q  66 ggactaaaatacccctgagctttacagacaaatgtgaaaagaccattaagcccatgtgttcatcttctcaaaatcttccctc 147  Q
    |||| ||||||||| | | ||| ||||||||| |||||||||||||||  |||||||||||||||||| |||||||||||||    
T  43123363 ggacgaaaatacccttcaacttcacagacaaacgtgaaaagaccattatacccatgtgttcatcttcttaaaatcttccctc 43123444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25628813 - 25628769
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  25628813 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 25628769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42618246 - 42618202
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  42618246 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 42618202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2640269 - 2640310
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  2640269 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 2640310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6571285 - 6571244
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  6571285 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 6571244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17886827 - 17886786
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  17886827 ttaatcatttaaaatttcgtcccttgacccacttaatcactg 17886786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25628569 - 25628610
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  25628569 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 25628610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37657187 - 37657146
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  37657187 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 37657146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42731756 - 42731715
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  42731756 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 42731715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6253777 - 6253733
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||    
T  6253777 ttaatcatttaaaatttagtcctttgaccaacttaatcactgtca 6253733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25453219 - 25453259
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  25453219 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 25453259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32934439 - 32934479
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  32934439 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 32934479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32934683 - 32934639
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  32934683 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtca 32934639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33828309 - 33828265
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  33828309 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtca 33828265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43266601 - 43266561
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  43266601 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 43266561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46205644 - 46205604
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  46205644 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 46205604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28469101 - 28469139
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatca 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  28469101 ttaatcatttaaaatttcgtcctttgaccaacttaatca 28469139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 46204515 - 46204553
Alignment:
Q  4 atcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  46204515 atcatttaaaatttcgtccattgaccaacttaatcactg 46204553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17102326 - 17102285
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  17102326 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 17102285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22081650 - 22081691
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||| ||||||||||||||    
T  22081650 ttaatcatttaaaatttcgtcctttgatcaacttaatcactg 22081691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22827085 - 22827126
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  22827085 ttaatcatttaaaatttcgttccttgacccacttaatcactg 22827126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22871399 - 22871440
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  22871399 ttaatcatttaaaatttcgtcctttgaccaatttaatcactg 22871440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23058520 - 23058557
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatc 38  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  23058520 ttaatcatttaaaatttcgtcctttgaccaacttaatc 23058557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24389122 - 24389081
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  24389122 ttaatcatttaaaattttgtcctttgaccaacttaatcactg 24389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27992045 - 27992004
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  27992045 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 27992004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32068431 - 32068390
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  32068431 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 32068390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32688555 - 32688514
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||    
T  32688555 ttaatcatttaaaatttcgtcccttgacccacttaataactg 32688514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10600284 - 10600240
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||| ||||||| ||||  |||||||||||||||||||||    
T  10600284 ttaatcattcaaaattttgtcctttgaccaacttaatcactgtca 10600240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28890670 - 28890714
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||||||   |||| ||||||||||||||||    
T  28890670 ttaatcatttaaaatttcgtcttttgactaacttaatcactgtca 28890714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42618002 - 42618042
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  42618002 ttaatcatttaaaatttcgtcctttgatcaacttaatcact 42618042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43266357 - 43266401
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||| ||   |||||||||||||||||||||    
T  43266357 ttaatcatttaaaatttcatcatttgaccaacttaatcactgtca 43266401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1011 - 1055
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  1011 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31407213 - 31407169
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  31407213 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 31407169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12065311 - 12065358
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtcaggt 48  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  12065311 ttaatcatttaaaatttcgacctttgaccaacttaatcactgtcaggt 12065358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21627804 - 21627845
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  21627804 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 21627845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21836365 - 21836324
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  21836365 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 21836324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30726096 - 30726055
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  30726096 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 30726055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30804198 - 30804157
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  30804198 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 30804157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33517871 - 33517830
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  33517871 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 33517830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6517593 - 6517633
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  6517593 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 6517633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7160895 - 7160935
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  7160895 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 7160935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12080973 - 12080929
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||    
T  12080973 ttaatcatttaaaatttcgtcctttgaccaacttaattactgtca 12080929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15913883 - 15913839
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||    
T  15913883 ttaataatttaaaatttcgtcctttgaccaacttaatcactgtca 15913839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11436006 - 11435968
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatca 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  11436006 ttaatcatttaaaatttcgtcccttgacccacttaatca 11435968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17734287 - 17734328
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  17734287 ttaatcatttaaaatttcgtcctttgaccaatttaatcactg 17734328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22502865 - 22502906
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||| ||||    
T  22502865 ttaatcatttaaaatttcgtcctttgaccaacttaataactg 22502906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30337755 - 30337714
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  30337755 ttaatcatttaaaatttcgtcctttgaccaatttaatcactg 30337714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7905334 - 7905378
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||||||   |||||||||||||||| ||||    
T  7905334 ttaatcatttaaaatttcgtcatttgaccaacttaatcaccgtca 7905378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14196706 - 14196750
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||| ||||   ||||||||||||||||||||    
T  14196706 ttaatcatttaaaatttggtccttggaccaacttaatcactgtca 14196750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31406969 - 31407009
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  31406969 ttaatcatttaaaatttcgtcctttgacaaacttaatcact 31407009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27891675 - 27891719
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  27891675 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 27891719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 51692856 - 51692812
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  51692856 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 51692812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 55866297 - 55866379
Alignment:
Q  66 ggactaaaatacccctgagctttacagacaaatgtgaaaagaccattaagcccatgtgttc-atcttctcaaaatcttccctc 147  Q
    |||| ||||||||| ||| ||| ||||||||| || |||||||||| |  ||||||||||| ||||||| |||||||||||||    
T  55866297 ggacgaaaatacccttgaacttcacagacaaacgtaaaaagaccatcatacccatgtgttcaatcttcttaaaatcttccctc 55866379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10408224 - 10408183
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  10408224 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 10408183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14802072 - 14802031
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  14802072 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 14802031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27069001 - 27069042
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  27069001 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 27069042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46661251 - 46661210
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  46661251 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 46661210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51859498 - 51859539
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  51859498 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 51859539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 52573319 - 52573360
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  52573319 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 52573360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 54858651 - 54858692
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  54858651 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 54858692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1178134 - 1178174
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  1178134 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 1178174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5818110 - 5818066
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||| |||  |||||||||||||||||||||    
T  5818110 ttaatcatttaaaatttcatcctttgaccaacttaatcactgtca 5818066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8438371 - 8438415
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||    
T  8438371 ttaatcatttaaaatttcgtcccttgacccacttaatcaccgtca 8438415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34765471 - 34765515
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||    
T  34765471 ttaatcatttaaaatttcgtcctttgatcaacttaatcactgtca 34765515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52909590 - 52909546
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||    
T  52909590 ttaattatttaaaatttcgtcctttgaccaacttaatcactgtca 52909546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 54858895 - 54858855
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  54858895 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 54858855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8439561 - 8439522
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcac 40  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  8439561 ttaatcatttaaaatttcgtcccttgacccacttaatcac 8439522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22718030 - 22718069
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcac 40  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  22718030 ttaatcatttaaaatttcgtcctttgaccaacttaatcac 22718069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22987186 - 22987147
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcac 40  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  22987186 ttaatcatttaaaatttcgtcctttgaccaacttaatcac 22987147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37976244 - 37976282
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatca 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  37976244 ttaatcatttaaaatttcgtcctttgaccaacttaatca 37976282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7452140 - 7452099
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  7452140 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 7452099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13058319 - 13058278
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  13058319 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 13058278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17356016 - 17356057
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  17356016 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 17356057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30642483 - 30642442
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||    
T  30642483 ttaatcatttaaaatttcgtcccttgacccacttaatgactg 30642442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39701244 - 39701203
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  39701244 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 39701203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44967160 - 44967201
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  44967160 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 44967201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49879298 - 49879339
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  49879298 ttaatcatttaaaatttcgtcctttgaccaatttaatcactg 49879339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50418759 - 50418800
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  50418759 ttaatcatttaaaatttcgtcctttgaccaatttaatcactg 50418800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50503916 - 50503957
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||| |||||  ||||||||||||||||||    
T  50503916 ttaatcatttaaaattccgtcctttgaccaacttaatcactg 50503957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 53129597 - 53129638
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||| |  ||||||||||||||||||    
T  53129597 ttaatcatttaaaatttcgttctttgaccaacttaatcactg 53129638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 54086786 - 54086827
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  54086786 ttaatcatttaaaattttgtcctttgaccaacttaatcactg 54086827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9400610 - 9400654
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||| ||||   ||||||||||||||||||||    
T  9400610 ttaatcatttaaaatttggtccttggaccaacttaatcactgtca 9400654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10407980 - 10408020
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  10407980 ttaatcatttaaaatttcgtcctttgatcaacttaatcact 10408020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36008935 - 36008975
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||| ||||  |||||||||||||||||    
T  36008935 ttaatcatttaaaatttagtcctttgaccaacttaatcact 36008975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45463164 - 45463204
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||||||   |||||||||||||||||    
T  45463164 ttaatcatttaaaatttcgtcatttgaccaacttaatcact 45463204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50504160 - 50504120
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  50504160 ttaatcatttaaaatttcgtcctttgacaaacttaatcact 50504120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51859741 - 51859701
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  51859741 ttaatcatttaaaatttcgtcctttgatcaacttaatcact 51859701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13692557 - 13692513
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  13692557 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 13692513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36755425 - 36755381
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  36755425 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 36755381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15604674 - 15604633
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15604674 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 15604633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15848425 - 15848384
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15848425 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 15848384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34448132 - 34448091
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  34448132 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 34448091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44713886 - 44713927
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  44713886 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 44713927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8342278 - 8342318
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  8342278 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 8342318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 22051088 - 22051126
Alignment:
Q  4 atcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  22051088 atcatttaaaatttcgtcctttgaccaacttaatcactg 22051126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6658184 - 6658143
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  6658184 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 6658143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8710803 - 8710762
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  8710803 ttaatcatttaaaatttcgtcctttgaccaactttatcactg 8710762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10713060 - 10713019
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||| ||||||  ||||||||||||||||||    
T  10713060 ttaatcatttaaaatgtcgtcctttgaccaacttaatcactg 10713019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11163145 - 11163186
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  11163145 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 11163186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16099361 - 16099320
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  16099361 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 16099320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36382464 - 36382423
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  || |||||||||||||||    
T  36382464 ttaatcatttaaaatttcgtcctttggccaacttaatcactg 36382423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36480055 - 36480014
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  36480055 ttaataatttaaaatttcgtcctttgaccaacttaatcactg 36480014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37895438 - 37895479
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||| |||  ||||||||||||||||||    
T  37895438 ttaatcatttaaaatttcatcctttgaccaacttaatcactg 37895479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39423852 - 39423811
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  39423852 ttaatcatttaaaattttgtcctttgaccaacttaatcactg 39423811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41588393 - 41588352
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||| |||  ||||||||||||||||||    
T  41588393 ttaatcatttaaaatttcatcctttgaccaacttaatcactg 41588352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15604430 - 15604470
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  15604430 ttaatcatttaaaatttcgtcctttgatcaacttaatcact 15604470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28226079 - 28226039
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||||| |  |||||||||||||||||    
T  28226079 ttaatcatttaaaatttcgtactttgaccaacttaatcact 28226039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41587325 - 41587369
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||| |||  | |||||||||||||||||||    
T  41587325 ttaatcatttaaaatttcatcctttaaccaacttaatcactgtca 41587369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35152680 - 35152636
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  35152680 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtca 35152636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37929509 - 37929551
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgt 43  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  37929509 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgt 37929551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1841796 - 1841755
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  1841796 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 1841755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6367899 - 6367858
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  6367899 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 6367858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14879308 - 14879267
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  14879308 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 14879267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40210461 - 40210502
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  40210461 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 40210502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 48779456 - 48779415
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  48779456 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 48779415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7821291 - 7821247
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||    
T  7821291 ttaatcatttataatttcgtcctttgaccaacttaatcactgtca 7821247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8898608 - 8898652
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||    
T  8898608 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgtca 8898652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12905994 - 12905950
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  12905994 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtca 12905950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13914159 - 13914199
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  13914159 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 13914199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20760840 - 20760800
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  20760840 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 20760800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24009666 - 24009710
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||| |||  |||||||||||||||||||||    
T  24009666 ttaatcatttaaaatttcatcctttgaccaacttaatcactgtca 24009710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31051041 - 31051081
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  31051041 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 31051081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35040949 - 35040909
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  35040949 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 35040909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36694373 - 36694417
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||    
T  36694373 ttaatcatttaaaatttcgccctttgaccaacttaatcactgtca 36694417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36710474 - 36710518
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||    
T  36710474 ttaatcatttaaaatttcgccctttgaccaacttaatcactgtca 36710518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40714778 - 40714738
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  40714778 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 40714738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41099070 - 41099026
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  41099070 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtca 41099026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 49955682 - 49955643
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcac 40  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  49955682 ttaatcatttaaaatttcgtcctttgaccaacttaatcac 49955643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17661942 - 17661980
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatca 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  17661942 ttaatcatttaaaatttcgtcctttgaccaacttaatca 17661980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 25065846 - 25065804
Alignment:
Q  105 agaccattaagcccatgtgttcatcttctcaaaatcttccctc 147  Q
    |||||||||  ||| ||||||||||||||||||||||||||||    
T  25065846 agaccattatacccctgtgttcatcttctcaaaatcttccctc 25065804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 43759157 - 43759115
Alignment:
Q  3 aatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||  |||||||||||| ||||||||    
T  43759157 aatcatttaaaatttcgtcctttgaccaacttaaccactgtca 43759115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 183312 - 183353
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  183312 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 183353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1103798 - 1103757
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||| ||||||    
T  1103798 ttaatcatttaaaatttcgtcctttgaccaacttattcactg 1103757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4960846 - 4960805
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||| ||||||||||||||    
T  4960846 ttaatcatttaaaatttcgtcctttgatcaacttaatcactg 4960805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7371381 - 7371422
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  7371381 ttaattatttaaaatttcgtcctttgaccaacttaatcactg 7371422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7821045 - 7821086
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  |||||||| |||||||||    
T  7821045 ttaatcatttaaaatttcgtcctttgaccaacgtaatcactg 7821086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19017720 - 19017761
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||| |  ||||||||||||||||||    
T  19017720 ttaatcatttaaaatttcgttcgttgaccaacttaatcactg 19017761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26024729 - 26024688
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  26024729 ttaatcatttaaaatttcgtcctttgaccaatttaatcactg 26024688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28324895 - 28324936
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  28324895 ttaatcatttaaaatttcgtcttttgaccaacttaatcactg 28324936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30711664 - 30711623
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  30711664 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 30711623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34464540 - 34464581
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  34464540 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 34464581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35038546 - 35038587
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||| ||||||||    
T  35038546 ttaatcatttaaaatttcgtcctttgaccaactcaatcactg 35038587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37578283 - 37578324
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||| |  ||||||||||||||||||    
T  37578283 ttaatcatttaaaatttcgttctttgaccaacttaatcactg 37578324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40714535 - 40714576
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  40714535 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 40714576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49723063 - 49723022
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||| |||  ||||||||||||||||||    
T  49723063 ttaatcatttaaaatttcatcctttgaccaacttaatcactg 49723022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49955438 - 49955479
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  49955438 ttaatcatttaaaattttgtcctttgaccaacttaatcactg 49955479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8898852 - 8898812
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||||||   |||||||||||||||||    
T  8898852 ttaatcatttaaaatttcgtcatttgaccaacttaatcact 8898812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28011674 - 28011630
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||| ||||   ||||||||||||||||||||    
T  28011674 ttaatcatttaaaatttggtccttggaccaacttaatcactgtca 28011630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28325139 - 28325099
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||||||   |||||||||||||||||    
T  28325139 ttaatcatttaaaatttcgtcttttgaccaacttaatcact 28325099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35473722 - 35473766
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||| |||||||||||| ||||  |||||||||||||||||||||    
T  35473722 ttaaacatttaaaattttgtcctttgaccaacttaatcactgtca 35473766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45749933 - 45749973
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  45749933 ttaatcatttaaaatttcgtcctttgacaaacttaatcact 45749973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11231 - 11272
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  11231 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 11272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11475 - 11434
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  11475 ttaatcatttaaaatttcgtcttttgaccaacttaatcactg 11434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12115 - 12074
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  12115 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 12074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 222124 - 222083
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  222124 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 222083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37655 - 37696
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  37655 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 37696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8316744 - 8316785
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  8316744 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 8316785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15230266 - 15230225
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15230266 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 15230225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23663636 - 23663677
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  23663636 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 23663677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36928813 - 36928772
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  36928813 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 36928772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38862900 - 38862859
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  38862900 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 38862859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39071979 - 39071938
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  39071979 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 39071938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42945205 - 42945246
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  42945205 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 42945246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8998024 - 8997980
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||| |||||  |||||||||||||||||||||    
T  8998024 ttaatcatttaaaattccgtcctttgaccaacttaatcactgtca 8997980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12199041 - 12199085
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||    
T  12199041 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgtca 12199085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12443469 - 12443513
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||    
T  12443469 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgtca 12443513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34685595 - 34685551
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  34685595 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtca 34685551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35634434 - 35634390
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  | |||||||||||||||||||    
T  35634434 ttaatcatttaaaatttcgtcctttaaccaacttaatcactgtca 35634390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37542560 - 37542520
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  37542560 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 37542520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41353908 - 41353864
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||    
T  41353908 ttaatcatttaaaatttcgtcctttgaccaacttaatcaccgtca 41353864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2535887 - 2535846
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||    
T  2535887 ttaatcatttaaaatttcgtcccttgacccacttaatgactg 2535846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10445670 - 10445629
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  10445670 ttaatcatttaaaatttcgtcttttgaccaacttaatcactg 10445629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12273009 - 12273050
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  12273009 ttaatcatttaaaatttcgtcctttgaccaatttaatcactg 12273050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25124654 - 25124695
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  25124654 ttaatcatttaaaatttcgtcctttgaccaacttaaccactg 25124695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34061665 - 34061624
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  34061665 ttaatcatttaaaatttcgtcctttgaccaagttaatcactg 34061624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34177307 - 34177266
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||    
T  34177307 ttaatcatttaaaatttcgtcccttgacccacttaatgactg 34177266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35756919 - 35756878
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  |||||||||||| |||||    
T  35756919 ttaatcatttaaaatttcgtcctttgaccaacttaagcactg 35756878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42945449 - 42945408
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  42945449 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 42945408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44664599 - 44664640
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  44664599 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 44664640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 234075 - 234035
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  234075 ttaatcatttaaaatttcgtcctttgatcaacttaatcact 234035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 710486 - 710446
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  710486 ttaatcatttaaaatttcgtcctttgatcaacttaatcact 710446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 747698 - 747658
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  747698 ttaatcatttaaaatttcgtcctttgatcaacttaatcact 747658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 871593 - 871553
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  871593 ttaatcatttaaaatttcgtcctttgatcaacttaatcact 871553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6472025 - 6471985
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||| ||||  |||||||||||||||||    
T  6472025 ttaatcatttaaaattttgtcctttgaccaacttaatcact 6471985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15230022 - 15230062
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  15230022 ttaatcatttaaaatttcgtcctttgatcaacttaatcact 15230062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27500423 - 27500379
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||| ||   |||||||||||||||||||||    
T  27500423 ttaatcatttaaaatttcatcatttgaccaacttaatcactgtca 27500379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38003546 - 38003586
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||||| |  |||||||||||||||||    
T  38003546 ttaatcatttaaaatttcgttctttgaccaacttaatcact 38003586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38956009 - 38955965
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||||    
T  38956009 ttaatcatttaaaatttagtcctttgatcaacttaatcactgtca 38955965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5994226 - 5994185
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  5994226 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 5994185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6150757 - 6150716
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  6150757 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 6150716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8322741 - 8322700
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  8322741 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 8322700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11047774 - 11047733
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  11047774 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 11047733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13362318 - 13362359
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  13362318 ttaatcatttaaaatttcgtcctctgaccaacttaatcactg 13362359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14194514 - 14194555
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  14194514 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 14194555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16156946 - 16156987
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  16156946 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 16156987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28269513 - 28269554
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  28269513 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 28269554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39453636 - 39453595
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  39453636 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 39453595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43159151 - 43159110
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  43159151 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 43159110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 186756 - 186712
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||    
T  186756 ttaatcatttaaaatttcgtcctttgaccaacttaatcattgtca 186712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5255108 - 5255152
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||||||||||||||||||||   |||||||||||||||||||||    
T  5255108 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtca 5255152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17544383 - 17544339
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||    
T  17544383 ttaatcatttaaaattttgtcctttgaccaacttaatcactgtca 17544339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20152872 - 20152912
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  20152872 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 20152912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38442404 - 38442360
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    |||| |||||||||||||||||  |||||||||||||||||||||    
T  38442404 ttaaccatttaaaatttcgtcctttgaccaacttaatcactgtca 38442360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11741854 - 11741807
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtcaggt 48  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  11741854 ttaatcatttaaaatttcgtcctttgacccagttaatcactgtcaggt 11741807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33871430 - 33871469
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcac 40  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  33871430 ttaatcatttaaaatttcgtcctttgaccaacttaatcac 33871469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35920319 - 35920357
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatca 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  35920319 ttaatcatttaaaatttcgtcctttgaccaacttaatca 35920357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3528964 - 3529005
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  3528964 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 3529005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6301880 - 6301839
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  6301880 ttaatcatttaaaatttcgtcctttgaccaatttaatcactg 6301839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8875540 - 8875581
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||| |  ||||||||||||||||||    
T  8875540 ttaatcatttaaaatttcgttctttgaccaacttaatcactg 8875581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11762054 - 11762013
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  11762054 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 11762013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13963166 - 13963125
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||| |  ||||||||||||||||||    
T  13963166 ttaatcatttaaaatttcgttctttgaccaacttaatcactg 13963125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17202736 - 17202695
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  17202736 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 17202695  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19892399 - 19892440
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  ||| ||||||||||||||    
T  19892399 ttaatcatttaaaatttcgtcctttgatcaacttaatcactg 19892440  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20153253 - 20153212
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||| |||  ||||||||||||||||||    
T  20153253 ttaatcatttaaaatttcatcctttgaccaacttaatcactg 20153212  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20814226 - 20814267
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  20814226 ttaatcatttaaaatttcgtcctttaaccaacttaatcactg 20814267  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21265234 - 21265275
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  21265234 ttaattatttaaaatttcgtcctttgaccaacttaatcactg 21265275  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27587452 - 27587411
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  27587452 ttaatcatttaaaatttagtcctttgaccaacttaatcactg 27587411  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27937144 - 27937185
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  27937144 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 27937185  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32242579 - 32242538
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  32242579 ttaatcatttaaaattttgtcctttgaccaacttaatcactg 32242538  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33871673 - 33871632
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  33871673 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 33871632  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38475124 - 38475165
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  38475124 ttaatcatttaaaatttcgtcatttgaccaacttaatcactg 38475165  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 5024111 - 5024151
Alignment:
Q  2 taatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  5024111 taatcatttaaaattttgtcctttgaccaacttaatcactg 5024151  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17544139 - 17544183
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactgtca 45  Q
    ||||||||||||||||| |||   |||||||||||||||||||||    
T  17544139 ttaatcatttaaaattttgtcatttgaccaacttaatcactgtca 17544183  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21287834 - 21287874
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||||||   |||||||||||||||||    
T  21287834 ttaatcatttaaaatttcgtcatttgaccaacttaatcact 21287874  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22298633 - 22298673
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    |||||||||||||||||| |||  |||||||||||||||||    
T  22298633 ttaatcatttaaaatttcatcctttgaccaacttaatcact 22298673  T

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Target: scaffold0599 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2484 - 2524
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcact 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  2484 ttaatcatttaaaatttcgtcctttgaccaacttaatcact 2524  T

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Target: scaffold0347 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 14509 - 14463
Alignment:
Q  101 gaaaagaccattaagcccatgtgttcatcttctcaaaatcttccctc 147  Q
    |||||||||||||  ||| ||||| ||||||||||||||||||||||    
T  14509 gaaaagaccattatacccctgtgtccatcttctcaaaatcttccctc 14463  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2480 - 2439
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||| ||  ||||||||||||||||||    
T  2480 ttaatcatttaaaatttcgccctttgaccaacttaatcactg 2439  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 69302 - 69261
Alignment:
Q  1 ttaatcatttaaaatttcgtcccatgaccaacttaatcactg 42  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  69302 ttaatcatttaaaatttcgtcctttaaccaacttaatcactg 69261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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