View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10335_low_5 (Length: 250)
Name: NF10335_low_5
Description: NF10335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10335_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1968340 - 1968575
Alignment:
| Q |
1 |
tgcttagagagcatgaacggttaatgcaggatgtttttcgtagtgtcaaaaaggctaatccttaaggaannnnnnngagtgttcctcagatgtgaaacta |
100 |
Q |
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| T |
1968340 |
tgcttagagagcatgaacggttaatgcaggatgtttttcgtagtgtcaaaaaggctaatccttaaggaatttttttgagtgttcctcagatgtgaaacta |
1968439 |
T |
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| Q |
101 |
tattttgacatgtattctgctgcctgataaagcaaaagaaactcaaagtttcaaatgacaagaatttgatatgtagcatagaatatggttaacaattatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1968440 |
tattttgacatgtattctgctgcctgataaagcaaaagaaactcaaagtttcaaatgacaagaatttgatatgtagcatagaatatggttaacaattatt |
1968539 |
T |
|
| Q |
201 |
gatgcaaaaagtgtatcatgatctatcattgcggtt |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
1968540 |
gatgcaaaaagtgtatcatgatctatcattgcggtt |
1968575 |
T |
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