View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10337_high_4 (Length: 308)
Name: NF10337_high_4
Description: NF10337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10337_high_4 |
 | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0038 (3 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 281; Significance: 1e-157; HSPs: 44)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 31285242 - 31285534
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285242 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtacacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
31285341 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285342 |
caatctataattttattggtgatcaatttgacggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
31285441 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285442 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
31285534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 26623954 - 26624246
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| ||||||||||| | | || || | |||||||| ||||| ||| | |||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
26623954 |
caacaagtgaaatcacttcttgataatggatctgatgatggggtccatatggttggaatgtatgggattggaggcttgggcaaatcaacacttgcaagag |
26624053 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||||||||| ||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26624054 |
caatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaa |
26624153 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26624154 |
gctcctttttaaaacaactggattggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaagat |
26624246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 26729931 - 26730223
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| ||||||||||| | | || || | |||||||| ||||| ||| | |||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
26729931 |
caacaagtgaaatcacttcttgataatggatctgatgatggggtccatatggttggaatgtatgggattggaggcttgggcaaatcaacacttgcaagag |
26730030 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||||||||| ||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26730031 |
caatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaa |
26730130 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26730131 |
gctcctttttaaaacaactggattggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaagat |
26730223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 40 - 293
Target Start/End: Complemental strand, 27698046 - 27697793
Alignment:
| Q |
40 |
ggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattat |
139 |
Q |
| |
|
|||||||| ||||| ||| ||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| || |||| |
|
|
| T |
27698046 |
ggggtccatatggttggaatttttgggattggaggcttgggaaaatcaacacttgcaagagcaatctataatttggttgctgatcaatttgaaggtttat |
27697947 |
T |
|
| Q |
140 |
gttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttaga |
239 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||||||||| ||||| |
|
|
| T |
27697946 |
gttttcttcataatgtgagaatgaattcagctaaaaataacttggaacatctccaagagaagctcctttttaaaacaactggatcggaaattaatttaga |
27697847 |
T |
|
| Q |
240 |
ccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27697846 |
ccatgttagtgacggaattccaatcattaaggaaaggctatgtagaaagaagat |
27697793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 26803133 - 26803421
Alignment:
| Q |
5 |
aagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaat |
104 |
Q |
| |
|
||||||||| |||||||||| ||| | || || | |||||||| ||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
26803133 |
aagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaat |
26803232 |
T |
|
| Q |
105 |
ctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctc |
204 |
Q |
| |
|
|||||||||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26803233 |
ctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagctt |
26803332 |
T |
|
| Q |
205 |
cttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||| | ||||||| ||||||| |||| |||||||| |||||| ||||||| |||||||| || |||||||| || |||||||| ||||| |
|
|
| T |
26803333 |
cttctaaaaacaactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagat |
26803421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 27679633 - 27679925
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| ||| | | || | |||||||| ||||| ||| ||||||| || ||||| ||||| |||||||||||||||||| |
|
|
| T |
27679633 |
caacaagtgaaatcgcttcttgatgagggatccgatgatggggtccatatggttggaatttatggcattggaggtttggggaaatcaacacttgcaagac |
27679732 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
||||||||||||| ||| |||||||| || || | |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
27679733 |
aaatctataattttgttgcagatcaattcgaaggttcatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaatatctccaagagaa |
27679832 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| |
|
|
| T |
27679833 |
gctccttttaaaaacaacaggtttggaaattaagttagaccatgttagtgagggaattccagtcataaaggaaagattatgtagaaagaagat |
27679925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 27705903 - 27705611
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| ||||||||| ||| | || || | |||||||| ||||| ||| ||| ||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
27705903 |
caacaagtgaaatcacttcttgatgagggacctgatgatggggtccatatggttggaatttttggcattggaggcttgggtaaatcaacacttgcaagag |
27705804 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
27705803 |
caatttataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaatgacttgaaacatctccaagagaa |
27705704 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||| ||| | ||||||| ||||| | |||| |||||||| |||||| ||||||| |||||| |||| ||||||||||| |||||||||||||| |
|
|
| T |
27705703 |
gcttcttctaaaaacaactggatcgaaaataaagttagatcatgtttgtgaggggattccattcataaaggaaaggctgtgtagaaagaagat |
27705611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 2 - 293
Target Start/End: Original strand, 26647163 - 26647454
Alignment:
| Q |
2 |
aacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagc |
101 |
Q |
| |
|
||||||||||||||||||||||||| ||| || || |||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| | ||| |
|
|
| T |
26647163 |
aacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggactttatggtactggaggtttgggtaaatcaacacttgccaaagc |
26647262 |
T |
|
| Q |
102 |
aatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaag |
201 |
Q |
| |
|
|| ||||||||| ||| |||||||||||| || |||| ||||||||| |||| ||||||||||||||| | |||||||||||||||||||| || || |
|
|
| T |
26647263 |
gatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatctccagaaggag |
26647362 |
T |
|
| Q |
202 |
ctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||| |||||| || | || | |||||||| | ||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26647363 |
ctcctttcaaaaacagttaaagtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
26647454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 2 - 293
Target Start/End: Original strand, 26753131 - 26753422
Alignment:
| Q |
2 |
aacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagc |
101 |
Q |
| |
|
||||||||||||||||||||||||| ||| || || |||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| | ||| |
|
|
| T |
26753131 |
aacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggactttatggtactggaggtttgggtaaatcaacacttgccaaagc |
26753230 |
T |
|
| Q |
102 |
aatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaag |
201 |
Q |
| |
|
|| ||||||||| ||| |||||||||||| || |||| ||||||||| |||| ||||||||||||||| | |||||||||||||||||||| || || |
|
|
| T |
26753231 |
gatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatctccagaaggag |
26753330 |
T |
|
| Q |
202 |
ctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||| |||||| || | || | |||||||| | ||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26753331 |
ctcctttcaaaaacagttaaagtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
26753422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 26656648 - 26656940
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||| | | ||| | |||||||||||||||||| | |||||| ||||||||||||||||||| | || |
|
|
| T |
26656648 |
caacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggactttatggtactggaggcatgggtaaatcaacacttgccaaag |
26656747 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| | | |||||||||||| || ||||||||||||| |||| ||||||||||||||| | ||||| |||||||||||||| ||| | |
|
|
| T |
26656748 |
caatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatctccaggagga |
26656847 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| ||||| || || || | |||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||||||||| |
|
|
| T |
26656848 |
gctcctttcaaaaactgttagagtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagat |
26656940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 26762619 - 26762911
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||| | | ||| | |||||||||||||||||| | |||||| ||||||||||||||||||| | || |
|
|
| T |
26762619 |
caacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggactttatggtactggaggcatgggtaaatcaacacttgccaaag |
26762718 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| | | |||||||||||| || ||||||||||||| |||| ||||||||||||||| | ||||| |||||||||||||| ||| | |
|
|
| T |
26762719 |
caatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatctccaggagga |
26762818 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| ||||| || || || | |||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||||||||| |
|
|
| T |
26762819 |
gctcctttcaaaaactgttagagtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagat |
26762911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 27337594 - 27337302
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| || || |||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||| || |
|
|
| T |
27337594 |
caacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggactttatggtactagaggcttgggaaaatcaacacttgcaaaag |
27337495 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| |||||||| ||| |||||||||||| ||| |||| ||||||||| |||| ||||||||||||||| || ||||||||||||||||| || | |
|
|
| T |
27337494 |
caatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatctccagaagga |
27337395 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| |||||| || | || | ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
27337394 |
gctcctttcaaaaacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagat |
27337302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 27398334 - 27398042
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| || || |||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||| || |
|
|
| T |
27398334 |
caacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggactttatggtactagaggcttgggaaaatcaacacttgcaaaag |
27398235 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| |||||||| ||| |||||||||||| ||| |||| ||||||||| |||| ||||||||||||||| || ||||||||||||||||| || | |
|
|
| T |
27398234 |
caatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatctccagaagga |
27398135 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| |||||| || | || | ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
27398134 |
gctcctttcaaaaacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagat |
27398042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 26884753 - 26885045
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||| | ||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||| | |||||||||||||||||||||||||||| || |
|
|
| T |
26884753 |
caacaattaaaattgcttcttgataaggaatctaacgaaggggtacacatggtaggaatttatggtactggaggcttgggtaaatcaacacttgcaaaag |
26884852 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||| | ||| |||||||||||| | |||||||||| ||| | || || ||||||||| || | |||||||||||||||||||| ||| | |
|
|
| T |
26884853 |
caatttataattatgttgctgatcaatttgaatgtgtatgttttctgcataaagtcagggagaattcaactcataataacttgaaacatctccaggagga |
26884952 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| ||||||||| ||| | |||||||||| |||||||||||||||||||| |||| |||||||| ||| |||||||||||| |
|
|
| T |
26884953 |
actccttttaaaaacaattaaattaaacattaagttaggagatgttagtgagggaattccactcataaaggaaagactacatagaaagaagat |
26885045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 42 - 293
Target Start/End: Complemental strand, 27530759 - 27530508
Alignment:
| Q |
42 |
ggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgt |
141 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| | ||||||||||||||||||| |||||| |||||||| ||| |||||||||||| | |||||| |
|
|
| T |
27530759 |
ggtccacatggtaggactttatggtactggaggcataggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaagttttatgt |
27530660 |
T |
|
| Q |
142 |
tttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagacc |
241 |
Q |
| |
|
||||| | ||||||||| |||||| || | ||||||||||||||||||||||||| |||||||| |||||| || ||||||| |||||||||| |
|
|
| T |
27530659 |
tttctagaaaatgtgagagtgaattcgacttcagataacttgaaacatctccaagagaaactccttttaaaaacagttagattggacattaagttaggag |
27530560 |
T |
|
| Q |
242 |
atgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27530559 |
gtgttagtcagggaattccaatcattaagcaaaggctatgtagaaagaagat |
27530508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 27427111 - 27426819
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| ||| | || || | |||||||| ||||| ||| |||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
27427111 |
caacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggctcaggtaaatcaacacttgcaagag |
27427012 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||||||||||||| ||| |||||||||||| || |||||||||||| | | || ||||||||||||||| ||||| |||||||| | |||| |||| |
|
|
| T |
27427011 |
caatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttccaggagat |
27426912 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| || ||| || | || |||||||||||| |||| ||||||||||| ||||||| ||||||||| | |||||||||||||| |
|
|
| T |
27426911 |
gctcctttcaaagacacttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagat |
27426819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 293
Target Start/End: Original strand, 26862264 - 26862555
Alignment:
| Q |
2 |
aacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagc |
101 |
Q |
| |
|
|||||||||||||||||||||||| |||| || || ||||||| |||||||||||||||||||| | |||||| |||| |||||||||||||||| ||| |
|
|
| T |
26862264 |
aacaagtgaaattgcttcttgatatggaatctgatgaaggggtacacatggtaggactttatggtactggaggcatggggaaatcaacacttgcaaaagc |
26862363 |
T |
|
| Q |
102 |
aatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaag |
201 |
Q |
| |
|
||| ||||||||| ||| ||||||||||| || |||||||||||||| | || |||||||||||| || | |||| ||||||||||||||| || || |
|
|
| T |
26862364 |
aatttataattttgttgccgatcaatttgaaggtgtatgttttcttcataaagttagagagaattcaactcataatagcttgaaacatctccagaaggag |
26862463 |
T |
|
| Q |
202 |
ctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|| ||||| |||||| || |||| | |||||||||| ||| |||||||||||||||| | || |||||||| ||| ||||| |||||| |
|
|
| T |
26862464 |
cttcttttaaaaacagttaaattgaacattaagttaggagatgctagtgagggaattccacttataaaggaaagactaaatagaatgaagat |
26862555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 293
Target Start/End: Original strand, 25483783 - 25484034
Alignment:
| Q |
42 |
ggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgt |
141 |
Q |
| |
|
||||| |||||||||||||| ||| | |||||| ||||||||||||||||||||| |||| | | ||||||||||| |||||||||||| || ||||| |
|
|
| T |
25483783 |
ggtccgcatggtaggactttttggtactggaggcatgggtaaatcaacacttgcaaaagcagtttttaattttcttgctgatcaatttgaaggtgtatgt |
25483882 |
T |
|
| Q |
142 |
tttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagacc |
241 |
Q |
| |
|
||||||||| |||| |||||||||||| | | |||||| |||||||||||||| ||| |||||||| |||| | || ||| || ||||||||| |
|
|
| T |
25483883 |
tttcttcataatgtcagagagaattcaagtcataataacctgaaacatctccaaaagatgctcctttcaaaaatagttaaatttgacggtaagttagaag |
25483982 |
T |
|
| Q |
242 |
atgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||| |||| |||||||||||| |
|
|
| T |
25483983 |
atgttagtgagggaataccaatcataaaggaaagactatctagaaagaagat |
25484034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 43 - 258
Target Start/End: Complemental strand, 27604161 - 27603946
Alignment:
| Q |
43 |
gtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgtt |
142 |
Q |
| |
|
||||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||| ||||||||| ||| |||||||||||| | | ||||| |
|
|
| T |
27604161 |
gtccacatggtaggactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgtt |
27604062 |
T |
|
| Q |
143 |
ttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagacca |
242 |
Q |
| |
|
||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||| |||||| || | | ||||||||||||| |
|
|
| T |
27604061 |
ttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaacacttcaacttgaaattaagttaggagg |
27603962 |
T |
|
| Q |
243 |
tgttagtgagggaatt |
258 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
27603961 |
tgttagtgagggaatt |
27603946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 293
Target Start/End: Original strand, 25539267 - 25539518
Alignment:
| Q |
42 |
ggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgt |
141 |
Q |
| |
|
||||| |||||||||||||||||| | |||||| ||||||||||||||||||||| |||| | | ||||||| ||| |||||||||||| | ||||| |
|
|
| T |
25539267 |
ggtccgcatggtaggactttatggtactggaggcatgggtaaatcaacacttgcaaaagcagtttttaattttgttgctgatcaatttgaagttgtatgt |
25539366 |
T |
|
| Q |
142 |
tttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagacc |
241 |
Q |
| |
|
||||||||| |||| |||||||||||| | | ||||||||||||||||||||| |||||||||||| |||| | || ||| || ||||||||| |
|
|
| T |
25539367 |
tttcttcataatgtcagagagaattcaagtcataataacttgaaacatctccaaaagaagctcctttcaaaaatagttaaatttgacggtaagttagaag |
25539466 |
T |
|
| Q |
242 |
atgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||| |||| || ||||||||| |
|
|
| T |
25539467 |
atgttagtgagggaataacaatcataaaggaaagactatctaaaaagaagat |
25539518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 293
Target Start/End: Original strand, 26143592 - 26143843
Alignment:
| Q |
42 |
ggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgt |
141 |
Q |
| |
|
||||| |||||||||||||| ||| | |||||| ||||||||||||||||||||| |||| | ||||||||| ||| |||||||||||| || ||||| |
|
|
| T |
26143592 |
ggtccgcatggtaggactttttggtactggaggcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgt |
26143691 |
T |
|
| Q |
142 |
tttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagacc |
241 |
Q |
| |
|
||||||||| |||| |||||||||||| | | |||||| ||||||||||||| || | |||||||| | |||| || |||| | |||||||| |
|
|
| T |
26143692 |
tttcttcataatgtcagagagaattcaagtcataataacctgaaacatctccaggaagatctccttttaagaacagttaaattgaaccataagttaggag |
26143791 |
T |
|
| Q |
242 |
atgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||| |||||||||||| |
|
|
| T |
26143792 |
atgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagat |
26143843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 28786921 - 28787180
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| | | | || || | || |||| |||||||||||||||||| | ||||||||||||||||||||||||| || || |
|
|
| T |
28786921 |
caacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaag |
28787020 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| || |||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| |
|
|
| T |
28787021 |
caatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggt |
28787120 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattcc |
260 |
Q |
| |
|
||||||||| |||||| || | || |||||||||||| |||||||||||||||||| |
|
|
| T |
28787121 |
gctccttttaaaaacacttcaactgaaaattaagttaggaggtgttagtgagggaattcc |
28787180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 43 - 291
Target Start/End: Complemental strand, 27610577 - 27610329
Alignment:
| Q |
43 |
gtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgtt |
142 |
Q |
| |
|
||||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||| ||||||||| ||| |||||||||||| | | ||||| |
|
|
| T |
27610577 |
gtccacatggtaggactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgtt |
27610478 |
T |
|
| Q |
143 |
ttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagacca |
242 |
Q |
| |
|
||||| | ||||||||||||||||| || |||||| ||||||||||| || ||| |||||||||| |||||| || | | ||||||||||| | |
|
|
| T |
27610477 |
ttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcaggaggagctccttttaaaaacacttcaacttgaaattaagtttggagg |
27610378 |
T |
|
| Q |
243 |
tgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaag |
291 |
Q |
| |
|
|||||||||||||||||| || |||||||||||| |||||||||| |
|
|
| T |
27610377 |
tgttagtgagggaattccttatataaaggaaaggctacatagaaagaag |
27610329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 293
Target Start/End: Original strand, 25580446 - 25580697
Alignment:
| Q |
42 |
ggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgt |
141 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| ||||||||||||||||||||| |||| | ||||||||| ||| |||||||||||| || ||||| |
|
|
| T |
25580446 |
ggtccacatggtaggactttatggtactggaggcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgt |
25580545 |
T |
|
| Q |
142 |
tttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagacc |
241 |
Q |
| |
|
||||||||| |||| ||||||| |||| | |||||||||||||||||||| | | |||||||| | || | || ||| | ||||||||| |
|
|
| T |
25580546 |
tttcttcataatgtcagagagatttcaattcttaataacttgaaacatctccattattatctccttttaataatagttaaattttactttaagttagtag |
25580645 |
T |
|
| Q |
242 |
atgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||| |||||||||||| |
|
|
| T |
25580646 |
atgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagat |
25580697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 27717998 - 27717708
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| | | || || | || ||||||||||||||||||||||| | ||||| |||||||||||||||||||||| || |
|
|
| T |
27717998 |
caacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggtactggaggattgggtaaatcaacacttgcaaaag |
27717899 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||| | | |||||||||| | ||||||||||||||||| || |||||| ||||||||||| || || | |
|
|
| T |
27717898 |
caatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcagaagga |
27717799 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaag |
291 |
Q |
| |
|
||||||||| |||||| || | | ||||||||||| | |||||||||||||||||| || |||||||||||| |||||||||| |
|
|
| T |
27717798 |
gctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaag |
27717708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 28793042 - 28793334
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| | | | || || | || |||| |||||||||||||||||| | ||||||||||||||||||||||||| || || |
|
|
| T |
28793042 |
caacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaag |
28793141 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| || |||||||||||| | | |||||||||| | |||||||||||| ||||||| ||||| |||||||||||||| ||| |
|
|
| T |
28793142 |
caatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagagttcagcttcaaatagattgaaacatctccaggaggt |
28793241 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||| |||||| || | || |||||||||||| |||||||||||||||||| || |||||||||||| || ||||||||| |
|
|
| T |
28793242 |
gctccttttaaaaacacttcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagat |
28793334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 27592520 - 27592228
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| | | | || || | |||||||| ||||| ||| |||||||||| ||||||||||| |||||||||||||| | || |
|
|
| T |
27592520 |
caacaagtgaaatcgcttcttgatgaaggatctgatcatggggtccatatggttggaatttatgggattggaggcttgggaaaatcaacacttgcgaaag |
27592421 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||| ||| ||| |||||||||||| | | |||||||||| | |||||| ||||| ||||||| ||||||||||||| ||||||| || | |
|
|
| T |
27592420 |
caatttataactttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgaaagagagttcagcttcaaataacttgaaaaatctccagcagga |
27592321 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||| |||||| || | | ||||||||||||| |||||| || |||||||| | || |||||||||||| | |||||||||| |
|
|
| T |
27592320 |
gctccttttaaaaacacttcaacttgaaattaagttaggaagtgttagcgaaggaattcctaaaataaaggaaaggctacatggaaagaagat |
27592228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 27677119 - 27676827
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||| |||||| |||||||||| | | | || || | |||||||| ||||| ||| |||||||||| ||||||||||| |||||||||||||| | || |
|
|
| T |
27677119 |
caacaaatgaaatcgcttcttgatgaaggatctgatcatggggtccatatggttggaatttatgggattggaggcttgggaaaatcaacacttgcgaaag |
27677020 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||| | | |||||||||| | |||||| ||||| ||||||| ||||||||||||| ||||||| || | |
|
|
| T |
27677019 |
caatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgaaagagagttcagcttcaaataacttgaaaaatctccagcagga |
27676920 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||| |||||| || | | ||||||||||||| |||||| || |||||||| | || |||||||||||| | |||||||||| |
|
|
| T |
27676919 |
gctccttttaaaaacacttcaacttgaaattaagttaggaagtgttagcgaaggaattcctaaaataaaggaaaggctacatggaaagaagat |
27676827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 293
Target Start/End: Original strand, 26056606 - 26056897
Alignment:
| Q |
2 |
aacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagc |
101 |
Q |
| |
|
|||||||||||||||||||||| | || || | || | ||||| |||||||||| ||| ||| | |||||| ||||||||||||||||||||| ||| |
|
|
| T |
26056606 |
aacaagtgaaattgcttcttgacatgggctctgagaatgaggtccgcatggtaggaatttttggtaccggaggcatgggtaaatcaacacttgcaaaagc |
26056705 |
T |
|
| Q |
102 |
aatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaag |
201 |
Q |
| |
|
| | | ||||| | ||| |||||||||||| || |||||||||||||| |||| |||||||||||| || || ||||||||||||||||| ||||| |
|
|
| T |
26056706 |
agtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaag |
26056805 |
T |
|
| Q |
202 |
ctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||| |||| | || ||| || | ||||||| |||||||||||||||| ||||| || |||||||| |||| |||||||||||| |
|
|
| T |
26056806 |
ctcctttcaaaaatagttaaatttgacggtcagttagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagat |
26056897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 293
Target Start/End: Original strand, 26076576 - 26076867
Alignment:
| Q |
2 |
aacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagc |
101 |
Q |
| |
|
|||||||||||||||||||||| | || || | || | ||||| |||||||||| ||| ||| | |||||| ||||||||||||||||||||| ||| |
|
|
| T |
26076576 |
aacaagtgaaattgcttcttgacatgggctctgagaatgaggtccgcatggtaggaatttttggtaccggaggcatgggtaaatcaacacttgcaaaagc |
26076675 |
T |
|
| Q |
102 |
aatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaag |
201 |
Q |
| |
|
| | | ||||| | ||| |||||||||||| || |||||||||||||| |||| |||||||||||| || || ||||||||||||||||| ||||| |
|
|
| T |
26076676 |
agtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaag |
26076775 |
T |
|
| Q |
202 |
ctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||| |||| | || ||| || | || |||| |||||||||||||||| ||||| || |||||||| |||| |||||||||||| |
|
|
| T |
26076776 |
ctcctttcaaaaatagttaaatttgacggtcagatagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagat |
26076867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 260
Target Start/End: Original strand, 28781832 - 28782043
Alignment:
| Q |
49 |
atggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttc |
148 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||||||| || |||| | ||||| || ||| |||||||||||| | | |||||||||| |
|
|
| T |
28781832 |
atggtaggactttatggtactggaggcttgggtaaatcaacacttgtaaaagcagtttataacttaattgctgatcaatttgaatgctcatgttttcttg |
28781931 |
T |
|
| Q |
149 |
atgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttag |
248 |
Q |
| |
|
| |||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||| ||| || || | || |||||||||||| |||||| |
|
|
| T |
28781932 |
aaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaagcacttcaactgaaaattaagttaggaggtgttag |
28782031 |
T |
|
| Q |
249 |
tgagggaattcc |
260 |
Q |
| |
|
|||||||||||| |
|
|
| T |
28782032 |
tgagggaattcc |
28782043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 44 - 293
Target Start/End: Complemental strand, 25492775 - 25492526
Alignment:
| Q |
44 |
tccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttt |
143 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| ||||||||||||||||||| | |||||||||| || ||| |||||||||||| || |||||||| |
|
|
| T |
25492775 |
tccacatggtaggactttatggtactggaggcttaggtaaatcaacacttgcaaaatcaatctataacttcattgctgatcaatttgaaggtttatgttt |
25492676 |
T |
|
| Q |
144 |
tcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccat |
243 |
Q |
| |
|
||| |||||||||||||||||| || || ||||||||| ||||||| || || ||||||| ||||| || |||| || ||||||||| | |
|
|
| T |
25492675 |
tctaggagatgtgagagagaattcaactccaagaaacttgaaagatctccaggaaaaactcctttcgaaaatggttagattagacattaagttaagaagt |
25492576 |
T |
|
| Q |
244 |
gttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||||||||| ||||||| || || | ||||||||| ||||||| |
|
|
| T |
25492575 |
gttagtgagggaattgcaatcataaaacaaggactatgtagagagaagat |
25492526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 26824502 - 26824739
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| ||||||||||| ||| || || | | |||||| |||||||||||||| || || ||||| || ||||||||||||||||||| || |
|
|
| T |
26824502 |
caacaagtgaaatctcttcttgataacgaatctgatgatgtggtccatatggtaggactttacggtattggaggtttaggtaaatcaacacttgcaaaag |
26824601 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
||| | ||||| | ||| |||| ||||||| | || ||||||||| | | |||||||||||||||||||| || |||| || ||||||||||| | |
|
|
| T |
26824602 |
caacttttaattctattgctgataaatttgaagttttttgttttcttgagaacgtgagagagaattcagctaagcatggcttggaaaatctccaagagca |
26824701 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttag |
238 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||| |
|
|
| T |
26824702 |
actccttttaaaaacaattggagaagaaattaagttag |
26824739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 27215135 - 27215349
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||| |||||||||||||| |||| | |||| ||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||| || |
|
|
| T |
27215135 |
caacaagtaaaattgcttcttgacaagggatctaaggaagaggtccacatggtaggacttcatggagctggaggcatgggtaaatcaacacttgcaaaag |
27215234 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| | |||||| ||| |||||| ||||| || | || |||||| | ||||||| |||||||||| || ||||||||||||||| || || || || |
|
|
| T |
27215235 |
caatttttaatttcattgctgatcagtttgaaggttcatattttctagaagatgtgaaagagaattcaactttaaataacttgaaacacctgcaggaaaa |
27215334 |
T |
|
| Q |
201 |
gctccttttgaaaac |
215 |
Q |
| |
|
| ||||| ||||||| |
|
|
| T |
27215335 |
gatccttatgaaaac |
27215349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 293
Target Start/End: Original strand, 25511645 - 25511867
Alignment:
| Q |
71 |
gaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagc |
170 |
Q |
| |
|
||||| ||||||||||||||||||||| |||| | | ||||| | ||| |||||||||||| | |||||||||||||| |||| |||||||||||| | |
|
|
| T |
25511645 |
gaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaac |
25511744 |
T |
|
| Q |
171 |
taaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaag |
270 |
Q |
| |
|
| || ||||||||||||||||| |||||||||||| |||| | || ||| || | || |||| |||||||||||||||| ||||| || ||| |
|
|
| T |
25511745 |
tcttaagaacttgaaacatctccagaagaagctcctttcaaaaatagttaaatttgacggtcagatagaagatgttagtgagggaataccaattataaag |
25511844 |
T |
|
| Q |
271 |
gaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||| |||| |||||||||||| |
|
|
| T |
25511845 |
gaaagactatctagaaagaagat |
25511867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 59 - 279
Target Start/End: Original strand, 28140276 - 28140496
Alignment:
| Q |
59 |
tttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgag |
158 |
Q |
| |
|
|||||||||| ||||| | ||||||| ||||||||||| |||||| ||||||||| ||| ||||||||||| | || |||||||||||| ||||||| |
|
|
| T |
28140276 |
tttatgggatgggagggtcgggtaaaacaacacttgcacaagcaatttataattttattgccgatcaatttgaatgtttgtgttttcttcataatgtgag |
28140375 |
T |
|
| Q |
159 |
agagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaatt |
258 |
Q |
| |
|
||| | |||||||||| || ||| || |||||||||| || ||||||| |||||| |||| ||| ||||||| | ||||| ||||| ||||| |
|
|
| T |
28140376 |
agaaatttcagctaaacatggcttagaagatctccaagaaaaactcctttctaaaacagttggtttgagcgttaagtttggacatgtaagtgaaggaata |
28140475 |
T |
|
| Q |
259 |
ccaatcattaaggaaaggcta |
279 |
Q |
| |
|
||||| || |||||||||||| |
|
|
| T |
28140476 |
ccaataataaaggaaaggcta |
28140496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 59 - 279
Target Start/End: Original strand, 29826727 - 29826947
Alignment:
| Q |
59 |
tttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgag |
158 |
Q |
| |
|
||||||| || || || ||||||||| |||||||||| ||||||| |||||| | |||||||| ||||||| | || |||||||||||||| |||| |
|
|
| T |
29826727 |
tttatggaattggcggattgggtaaaacaacacttgctcgagcaatttataatatgattggtgataaatttgaatgcttgtgttttcttcatgacttgag |
29826826 |
T |
|
| Q |
159 |
agagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaatt |
258 |
Q |
| |
|
||| | |||||||||| || ||| ||||||||||| ||||||| |||| |||||| ||| |||||| | |||| ||| |||||| || |||||| |
|
|
| T |
29826827 |
agaaagttcagctaaacatggcttagaacatctccaacagaagcttctttccaaaacagttgaattggacactaagctaggagatgttaacgaaggaatt |
29826926 |
T |
|
| Q |
259 |
ccaatcattaaggaaaggcta |
279 |
Q |
| |
|
||||| || ||| |||||||| |
|
|
| T |
29826927 |
ccaataataaagcaaaggcta |
29826947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 263
Target Start/End: Complemental strand, 29843428 - 29843224
Alignment:
| Q |
59 |
tttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgag |
158 |
Q |
| |
|
||||||| || || || ||||||||| |||||||||| ||||||| |||||||| ||| |||| ||||||| | || ||||||||||| || | ||| |
|
|
| T |
29843428 |
tttatggaattggtggattgggtaaaacaacacttgctcgagcaatttataatttgattgctgataaatttgaatgtttgtgttttcttcacgacgggag |
29843329 |
T |
|
| Q |
159 |
agagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaatt |
258 |
Q |
| |
|
||| | |||||||||| || ||| | ||||||||||||||||| |||| |||||| ||| ||||| |||||| ||| |||||| ||| |||||| |
|
|
| T |
29843328 |
agaaagttcagctaaacatggcttagagcatctccaagagaagcttctttccaaaacagttgatttggacattaagctaggagatgttaatgaaggaatt |
29843229 |
T |
|
| Q |
259 |
ccaat |
263 |
Q |
| |
|
||||| |
|
|
| T |
29843228 |
ccaat |
29843224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 26937790 - 26937866
Alignment:
| Q |
79 |
ggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgt |
155 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||| |||||||||||||||| | || |||||||||||| |||| |
|
|
| T |
26937790 |
ggtaaatcaacacttgcacgagcaatttataatttgattggtgatcaatttgaaagtttgtgttttcttcataatgt |
26937866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 28227720 - 28227808
Alignment:
| Q |
86 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
174 |
Q |
| |
|
||||||||||||| ||| | ||||||||| | | |||||||||||||| || ||||||||||| ||||| || || |||||||||||| |
|
|
| T |
28227720 |
caacacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagctaaa |
28227808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 266
Target Start/End: Original strand, 26724320 - 26724516
Alignment:
| Q |
70 |
ggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcag |
169 |
Q |
| |
|
||||| ||||||||| | |||||| | ||||| | ||| |||| ||| |||||||||||| || || ||||| ||||| |||||||||| |||||| |
|
|
| T |
26724320 |
ggaggattgggtaaaacgacacttactcgagcagtttatgatttgattgctgatcaatttgaagggttgtgtttccttcacaatgtgagagaaaattcaa |
26724419 |
T |
|
| Q |
170 |
ctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcat |
266 |
Q |
| |
|
|||| || ||| || ||||||||||||||||||| | ||| ||| ||||||||| ||||||| | |||||||||| || ||| ||||||| |
|
|
| T |
26724420 |
ttaaatatggcttagaatatctccaagagaagctcctctccaaattaatcggattggaatttaagttcggagatgttagtgaagggatttcaatcat |
26724516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 28243563 - 28243651
Alignment:
| Q |
86 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
174 |
Q |
| |
|
||||||||||||||||| | ||||||| | | ||||||||||||| | |||||||||||||| ||||| || || |||||| ||||| |
|
|
| T |
28243563 |
caacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgtaagggaaaattcaactaaa |
28243651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 28186163 - 28186249
Alignment:
| Q |
88 |
acacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
174 |
Q |
| |
|
||||||||||||||| | ||||||| || | |||||||||||||| || ||||||||||| ||||| || | |||||||||||| |
|
|
| T |
28186163 |
acacttgcaagagcagtttataattccctagctgatcaatttgatgatttgtgttttcttcacgatgtaaggggaaattcagctaaa |
28186249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 28235333 - 28235421
Alignment:
| Q |
86 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
174 |
Q |
| |
|
||||||||||||||||| | ||||||| | | ||||||||||||||| || ||||||||||| || || || || |||||| ||||| |
|
|
| T |
28235333 |
caacacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttcttcacgacgtaagggaaaattcatctaaa |
28235421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 267839 - 267547
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | | || || | |||||||| ||||| ||| |||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
267839 |
caacaagtgaaattgcttcttgataatggatctgatgatggggtccatatggttggaatttatgggattggaggcttgggtaaatcaacccttgcaagag |
267740 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| |
|
|
| T |
267739 |
caatctataattttattgctgatcaatttgaaggattatgttttcttcatgatgtgagagaaaattcagctataagtaacttgaaacatctccaagagaa |
267640 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
267639 |
gctccttttaaaaacaactggattggaaattaagttagaccatgttagtgagggcattccaatcattaaggaaaggctatgtagaaagaagat |
267547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 28127174 - 28126882
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||| |||||||| ||||||| | | || | | |||||||||||||||||||||||| || |||||||||||||||||||||||||||| || |
|
|
| T |
28127174 |
caacaagtgaatttgcttctcgataagggatatgatgatgaggtccacatggtaggactttatggtattggaggcttgggtaaatcaacacttgcaaaag |
28127075 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| |||||||| ||| |||||||||||| || ||||||||||| | ||||||||||||| |||| || | |||| ||||||||||||||||| || |
|
|
| T |
28127074 |
caatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagatttcaactccatataatttgaaacatctccaagaaaa |
28126975 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||||| || |||||||||| ||||||||||| |
|
|
| T |
28126974 |
gctccttttgaaaacagttggattggacattaagttaggaggtgttagtgagggaattgcaatcataaaacaaaggctatgcagaaagaagat |
28126882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 28163874 - 28163597
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||| | | || | | ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || |
|
|
| T |
28163874 |
caacaagtgaaattgcttctcgataagggatatgatgatgaggtccacatggtaggactttatgatactggaggcttgggtaaatcaacacttgcaaaag |
28163775 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| |||||||| ||| |||||||||||| || ||||||||||| | |||||||||||||||||| || | ||||||||||||||||| || | |
|
|
| T |
28163774 |
caatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaaga |
28163675 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggcta |
279 |
Q |
| |
|
|||| ||||| ||||| || ||| ||| |||||||||| |||||||||||||||| ||||||| || |||||||| |
|
|
| T |
28163674 |
gctctttttg-aaacagttagatcggacattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggcta |
28163597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 279
Target Start/End: Original strand, 26136640 - 26136849
Alignment:
| Q |
70 |
ggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcag |
169 |
Q |
| |
|
||||| || |||||| |||||||| | ||||| | |||||||| ||| ||||||||||| ||||| || || ||||| ||||| |||| ||||||| |
|
|
| T |
26136640 |
ggaggattaggtaaaacaacacttactcgagcagtttataatttgattgcggatcaatttgaaggattgtgcttccttcacaatgtgcgagaaaattcag |
26136739 |
T |
|
| Q |
170 |
ctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaa |
269 |
Q |
| |
|
|||| || ||| || ||||||||||| ||||||| | ||| |||| |||||||| |||||||||| ||||||||| | |||||||||||||| || |
|
|
| T |
26136740 |
ttaaatatggcttagaatatctccaagagcagctcctctccaaatcaatcggattggagattaagttaggacatgttagtaaaggaattccaatcataaa |
26136839 |
T |
|
| Q |
270 |
ggaaaggcta |
279 |
Q |
| |
|
||||||||| |
|
|
| T |
26136840 |
agaaaggcta |
26136849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 29273337 - 29273048
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||| |||| |||||||||||| | | || || | ||| |||| ||||| ||| |||||||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
29273337 |
caacaagtcaaatcgcttcttgataatggatctgatgatgggatccatatggttggaatttatgggattggtggcttgggtaaatcaacccttgcaagag |
29273238 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29273237 |
caatctataatttttttgctgatcaatttgaagatttatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
29273138 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaa |
290 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||||| || ||||| |||||| |||||||||| |
|
|
| T |
29273137 |
actccttttaaaaacaactggattggaaattaagttagatcatgttagtgaggggattccaattataaaggagaggctaagtagaaagaa |
29273048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 60252 - 60544
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| ||| | || || | |||||||| ||||| ||| |||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
60252 |
caacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggctcaggtaaatcaacacttgcaagag |
60351 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||||||||||||| ||| |||||||||||| || |||||||||||| | | || ||||||||||||||| ||||| |||||||| | |||| |||| |
|
|
| T |
60352 |
caatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttccaggagat |
60451 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| || ||| || | || |||||||||||| |||| ||||||||||| ||||||| ||||||||| | |||||||||||||| |
|
|
| T |
60452 |
gctcctttcaaagacacttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagat |
60544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 109; Significance: 8e-55; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 18074444 - 18074736
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| ||| | || || | |||||||| ||||| ||| |||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
18074444 |
caacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggctcaggtaaatcaacacttgcaagag |
18074543 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||||||||||||| ||| |||||||||||| || |||||||||||| | | || ||||||||||||||| ||||| |||||||| | |||| |||| |
|
|
| T |
18074544 |
caatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttccaggagat |
18074643 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| || ||| || | || |||||||||||| |||| ||||||||||| ||||||| ||||||||| | |||||||||||||| |
|
|
| T |
18074644 |
gctcctttcaaagacacttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagat |
18074736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 18679055 - 18678763
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| | | || || | || |||| |||||||||||||||||| || |||||| ||||||||| ||||||||||| || |
|
|
| T |
18679055 |
caacaagtgaaatcgcttcttgatgaatgatcttatgatggagtccgcatggtaggactttatggcattggaggcatgggtaaattaacacttgcaaaag |
18678956 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||| | | |||||||||| | |||||||||||||||||||| |||| | |||||||||||||| ||| | |
|
|
| T |
18678955 |
caatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggagga |
18678856 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| |||||| || | || |||||||||||| |||||||||||||||||| || |||||||||||| || ||||||||| |
|
|
| T |
18678855 |
actccttttaaaaacactttcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagat |
18678763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 18698895 - 18698636
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
|||||||||||| |||||||||||| | | || || | || |||| |||| ||||||||||||| || |||||| ||||||||||||||||||| | || |
|
|
| T |
18698895 |
caacaagtgaaagcgcttcttgataaaggatctgatgatggagtccgcatgttaggactttatggcattggaggcatgggtaaatcaacacttgcgaaag |
18698796 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||| | | |||||||||| | |||||||||||||||||||| |||| | |||||||||||||| ||| | |
|
|
| T |
18698795 |
caatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggagga |
18698696 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattcc |
260 |
Q |
| |
|
|||||||| |||||| | | | || |||||||||||| |||||||||||||||||| |
|
|
| T |
18698695 |
actccttttaaaaacactagcactgaaaattaagttaggaggtgttagtgagggaattcc |
18698636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 18730999 - 18730707
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||||| | | || || || |||| |||| ||||||||||||| || |||||| |||| |||||||||||||| | || |
|
|
| T |
18730999 |
caacaagtgaaatcgcttcttgataaaggatcttatggtggagtccgcatgataggactttatggtattggaggcatgggaaaatcaacacttgctaaag |
18730900 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
||| ||||||||| ||| |||||||||||| | | |||||||||| | |||||||||||||||||||| |||| | |||||||||||||| ||| | |
|
|
| T |
18730899 |
taatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggagga |
18730800 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| |||||| | | | || |||||||||||| |||||||||||||||||| || |||||||||||| || ||||||||| |
|
|
| T |
18730799 |
actccttttaaaaacactagcactgaaaattaagttaggaggtgttagtgagggaattccctatataaaggaaaggctacatacaaagaagat |
18730707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 18723580 - 18723365
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||||| | | ||||| || |||| |||| ||||||||||||| || |||||| |||| |||||||||||||||| || |
|
|
| T |
18723580 |
caacaagtgaaatcgcttcttgataaaggatctaatggtggagtccgcatgataggactttatggtattggaggcatgggaaaatcaacacttgcaaaag |
18723481 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
||| ||||||||| ||| |||||||||||| | | |||||||||| | | |||||||||||||||||| |||| | |||||||||||||| ||| | |
|
|
| T |
18723480 |
gaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaacgtgagagagaattcagcttcaaatcaattgaaacatctccaggagga |
18723381 |
T |
|
| Q |
201 |
gctccttttgaaaaca |
216 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
18723380 |
actccttttaaaaaca |
18723365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 18654972 - 18654680
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||||| | | || || || |||| |||| ||||||||||||| || |||||| |||| |||||||||||||||| | |
|
|
| T |
18654972 |
caacaagtgaaatcgcttcttgataaaggatctgatggtggagtccgcatgataggactttatggtattggaggcatgggaaaatcaacacttgcaaaat |
18654873 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| |||||| | ||| |||||||||||| | | |||||||||| | |||||||||| |||||| || |||| | |||||||||||||| ||| | |
|
|
| T |
18654872 |
caattaataattgtattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagaaaattcatcttcaaatcaattgaaacatctccaggagga |
18654773 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagat |
293 |
Q |
| |
|
|||||||| |||||| || | || |||||||||||| |||||||||||||||||| || |||||||||||| || ||||||||| |
|
|
| T |
18654772 |
actccttttaaaaacactttcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagat |
18654680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 5090247 - 5090171
Alignment:
| Q |
203 |
tccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggcta |
279 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||| | || | |||||||||||||||||||| ||| |||||||| |
|
|
| T |
5090247 |
tcctttttaaaacaattggattggaaattaggtttggagatatcagtgagggaattccaatcataaagaaaaggcta |
5090171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 258
Target Start/End: Complemental strand, 4167 - 3954
Alignment:
| Q |
45 |
ccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgtttt |
144 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||||||||||| || |||||| ||||||||| ||| |||| ||||||| | | ||||||| |
|
|
| T |
4167 |
ccacatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttattgctgatgaatttgaatgctcatgtttt |
4068 |
T |
|
| Q |
145 |
cttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatg |
244 |
Q |
| |
|
||| | |||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||| |||||| || | | ||||||||||||| || |
|
|
| T |
4067 |
cttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaacacttcaacttgaaattaagttaggaggtg |
3968 |
T |
|
| Q |
245 |
ttagtgagggaatt |
258 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3967 |
ttagtgagggaatt |
3954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13174 - 12959
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||| ||||||| |||||||||| | | | || || | || ||||||||||||||||||||||| | ||||||||||||||||||||||||| || || |
|
|
| T |
13174 |
caacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaag |
13075 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| || |||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| | |
|
|
| T |
13074 |
caatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggagga |
12975 |
T |
|
| Q |
201 |
gctccttttgaaaaca |
216 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
12974 |
actccttttaaaaaca |
12959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 3038 - 2748
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||||||||||| |||||||||| | | || || | || ||||||||||||||||||||||| | ||||| |||||||||||||||||||||| || |
|
|
| T |
3038 |
caacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggtactggaggattgggtaaatcaacacttgcaaaag |
2939 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| ||||||||||| || | | |
|
|
| T |
2938 |
caatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatcttcagttgga |
2839 |
T |
|
| Q |
201 |
gctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaag |
291 |
Q |
| |
|
||||||||| |||||| || | | ||||||||||| | |||||||||||||||||| || |||||||||||| |||||||||| |
|
|
| T |
2838 |
gctccttttaaaaacacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaag |
2748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 8170 - 8385
Alignment:
| Q |
1 |
caacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagag |
100 |
Q |
| |
|
||||| ||||||| |||||||||| | | | || || | || ||||||||||||||||||||||| | ||||||||||||||||||||||||| || || |
|
|
| T |
8170 |
caacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaag |
8269 |
T |
|
| Q |
101 |
caatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaa |
200 |
Q |
| |
|
|||| ||||||||| || |||||||||||| | | |||||||||| | |||||||||||||||||||| |||||| |||||||||||||| ||| | |
|
|
| T |
8270 |
caatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggagga |
8369 |
T |
|
| Q |
201 |
gctccttttgaaaaca |
216 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
8370 |
actccttttaaaaaca |
8385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 16691628 - 16691812
Alignment:
| Q |
79 |
ggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaata |
178 |
Q |
| |
|
|||||| |||||||||| ||||||| |||||||| ||| |||||||||||| | || |||||||||||||| |||||||| |||||| ||||| || |
|
|
| T |
16691628 |
ggtaaaacaacacttgctcgagcaatttataatttgattgctgatcaatttgaatgtttgtgttttcttcatgacgtgagagaaaattcatctaaacatg |
16691727 |
T |
|
| Q |
179 |
acttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaat |
263 |
Q |
| |
|
||| ||||||| ||||| | |||||||| ||||| |||||||| || |||||||||| ||||||||||| ||||||||||| |
|
|
| T |
16691728 |
gcttagaacatcttcaagaaaggctcctttccaaaaccattggattagacattaagttaggacatgttagtgaaggaattccaat |
16691812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 28218 - 28306
Alignment:
| Q |
86 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
174 |
Q |
| |
|
||||||||||||| ||| | ||||||||| | | |||||||||||||| || ||||||||||| ||||| || || |||||||||||| |
|
|
| T |
28218 |
caacacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagctaaa |
28306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 43725 - 43813
Alignment:
| Q |
86 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
174 |
Q |
| |
|
||||||||||||||||| | ||||||| | | ||||||||||||| | |||||||||||||| ||||| || || |||||| ||||| |
|
|
| T |
43725 |
caacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgtaagggaaaattcaactaaa |
43813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 35495 - 35583
Alignment:
| Q |
86 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
174 |
Q |
| |
|
||||||||||||||||| | ||||||| | | ||||||||||||||| || ||||||||||| || || || || |||||| ||||| |
|
|
| T |
35495 |
caacacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttcttcacgacgtaagggaaaattcatctaaa |
35583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 279
Target Start/End: Original strand, 3280418 - 3280620
Alignment:
| Q |
77 |
tgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaa |
176 |
Q |
| |
|
||||||| |||| |||||||||||| | |||||||| ||| | |||||||||| | ||||||||||||| |||||||||| |||||||| ||| | |
|
|
| T |
3280418 |
tgggtaagacaactcttgcaagagcagtttataatttcattgctaatcaatttgaatgtgtatgttttcttcacaatgtgagagaaaattcagcaaaaca |
3280517 |
T |
|
| Q |
177 |
taacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaagg |
276 |
Q |
| |
|
| | | ||||||||| || | | |||| ||||| |||||||||| |||||||||| || ||||||||||||||||||||| ||| ||||| |
|
|
| T |
3280518 |
tggtctagagcatctccaaaaggattttctttccaaaactgttggattggacattaagttaggagatagtagtgagggaattccaatcataaagcaaagg |
3280617 |
T |
|
| Q |
277 |
cta |
279 |
Q |
| |
|
||| |
|
|
| T |
3280618 |
cta |
3280620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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