View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10337_high_5 (Length: 291)
Name: NF10337_high_5
Description: NF10337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10337_high_5 |
 |  |
|
| [»] chr8 (5 HSPs) |
 |  |
|
| [»] scaffold0493 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 75 - 291
Target Start/End: Complemental strand, 38341934 - 38341718
Alignment:
| Q |
75 |
atattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctt |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38341934 |
atattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctt |
38341835 |
T |
 |
| Q |
175 |
aacaatacatcattttatttgcaatctttctcagaatgctaacgggagnnnnnnncctctaaagaagcataaaagatctcctattgttggtgtggaggat |
274 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38341834 |
aacaatacatcattttatttgcaatctttctcagaatgctaacgggagaaaaaaacctctaaagaagcataaaagatctcctattgttggtgtggaggat |
38341735 |
T |
 |
| Q |
275 |
aaaggtagtaaaacctc |
291 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
38341734 |
aaaggtagtaaaacctc |
38341718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 38334025 - 38333965
Alignment:
| Q |
231 |
ctctaaagaagcataaaagatctcctattgttggtgtggaggataaaggtagtaaaacctc |
291 |
Q |
| |
|
|||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| |||| |
|
|
| T |
38334025 |
ctctaaagaagcataaaatatcttctattgctggtgtggaggataaaggtggtaaatcctc |
38333965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 16515088 - 16515117
Alignment:
| Q |
20 |
agagtatgtgtataaataagagaacacaaa |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
16515088 |
agagtatgtgtataaataagagaacacaaa |
16515117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 38341972 - 38341932
Alignment:
| Q |
18 |
agagagtatgtgtataaataagagaacacaaaaggttagata |
59 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
38341972 |
agagagtatgtgtataaataggagaacac-aaaggttagata |
38341932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 45000198 - 45000131
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgtt |
144 |
Q |
| |
|
|||||| ||||||||||||||| |||||| ||| ||||| |||| |||||||||||| ||||| |||| |
|
|
| T |
45000198 |
tattgtgaaggggaaacccttg-aggagatattctctcctgttctatcctatttcttaataaaattgtt |
45000131 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 37549926 - 37550029
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctta |
175 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||||| ||| |||||||| || |
|
|
| T |
37549926 |
tattgtgaaggggaaactcttggaggagagattatctcctattctatcatatttcttaaataaagtgttctttctattccattccattcttgggttccta |
37550025 |
T |
 |
| Q |
176 |
acaa |
179 |
Q |
| |
|
|||| |
|
|
| T |
37550026 |
acaa |
37550029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 20642114 - 20642070
Alignment:
| Q |
110 |
tctcccattctttccta-tttcttagtaaaagtgttctttctatt |
153 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| ||||||||||| |
|
|
| T |
20642114 |
tctcccattctttcctattttcttaataaaagttttctttctatt |
20642070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 48507450 - 48507494
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattct |
120 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
48507450 |
tattgtgaaagggaaacccttggaggagagattctctcctattct |
48507494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 37422960 - 37422857
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctta |
175 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||| | |||||||| |||||||| || |
|
|
| T |
37422960 |
tattgtgaaggtgaaacccttggaggagagattctctcctattctatcctatttcttcataaaagtgttctttctttggaattcaatttttgggttccta |
37422861 |
T |
 |
| Q |
176 |
acaa |
179 |
Q |
| |
|
|||| |
|
|
| T |
37422860 |
acaa |
37422857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 21449765 - 21449705
Alignment:
| Q |
18 |
agagagtatgtgtataaataagagaacacaaaaggttagataaagagtatcttttgaatattgtaa |
83 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| || |||||||||||||||||||||||||| |
|
|
| T |
21449765 |
agagagtatgtgtataaataggagaaca-aaaatgt----taaagagtatcttttgaatattgtaa |
21449705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 13728636 - 13728685
Alignment:
| Q |
85 |
ggggaaacccttggaggagaga-ttatctcccattctttcctatttctta |
133 |
Q |
| |
|
|||||||||||||||||||| | || ||||| |||||||||||||||||| |
|
|
| T |
13728636 |
ggggaaacccttggaggagatatttctctcctattctttcctatttctta |
13728685 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 41873654 - 41873557
Alignment:
| Q |
82 |
aaaggggaaacccttggaggagagattatctcccattctttccta-tttcttagtaaaagtgttctttctattccattcaattgttgggttcttaaca |
178 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||| || ||||||| | | ||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
41873654 |
aaaggggaaactcttggaggagagattatctcctggtctttcttattttcttaatttagtggttctttctattccattcagctcttgggttcctaaca |
41873557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 34957970 - 34957894
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagaga-ttatctcccattctttcctatttc-ttagtaaaagtgttctttct |
150 |
Q |
| |
|
|||||| |||| | ||||||||||||||||| || ||||| ||| ||||||||||| ||| ||||||||||| |||| |
|
|
| T |
34957970 |
tattgtgaaggtgtaacccttggaggagagatttctctcctattatttcctatttctttattaaaagtgttcgttct |
34957894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 180
Target Start/End: Original strand, 16502583 - 16502688
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagaga-ttatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctt |
174 |
Q |
| |
|
|||||| |||||||||||||||||||||||| || ||||| ||||| || ||||||||| || |||||||||||||| || ||||| |||||||| | |
|
|
| T |
16502583 |
tattgtgaaggggaaacccttggaggagagatttctctcctattctatcatatttcttaatataagtgttctttctaaagaatccaattcttgggttcct |
16502682 |
T |
 |
| Q |
175 |
aacaat |
180 |
Q |
| |
|
|||||| |
|
|
| T |
16502683 |
aacaat |
16502688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 53504679 - 53504782
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctta |
175 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| || || |||| || ||||||||| ||||||| |||||||||||||||||| || ||||| || |
|
|
| T |
53504679 |
tattgtgaaggggaaacccttggaggagtgattctcccctgttctatcatatttcttaaattaagtgttttttctattccattcaattatttggttccta |
53504778 |
T |
 |
| Q |
176 |
acaa |
179 |
Q |
| |
|
|||| |
|
|
| T |
53504779 |
acaa |
53504782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 38870639 - 38870592
Alignment:
| Q |
86 |
gggaaacccttggaggagagattatctcccattctttcctatttctta |
133 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||| |||||||||||| |
|
|
| T |
38870639 |
gggaaacccttgcaggagagattatctcccactctatcctatttctta |
38870592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 40020752 - 40020673
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagatt-atctccc-attctttcctattt---cttagtaaaagtgttctttct |
150 |
Q |
| |
|
|||||| |||||||| |||||| |||||||||| ||||||| |||||||||||||| |||| |||||||||||||||| |
|
|
| T |
40020752 |
tattgtgaaggggaatcccttgaaggagagatttatctccctattctttcctattttttcttaataaaagtgttctttct |
40020673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 3479248 - 3479153
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttc |
172 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||| |||| |||| || ||||||||| |||||||||||||| || |||||||| |||||||| |
|
|
| T |
3479248 |
tattgtcaaggggaaacccttg-aggagagattctctcttattccatcatatttcttaaataaagtgttctttcttttgaattcaattcttgggttc |
3479153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 38870728 - 38870697
Alignment:
| Q |
18 |
agagagtatgtgtataaataagagaacacaaa |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
38870728 |
agagagtatgtgtataaataagagaacacaaa |
38870697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 49445074 - 49445045
Alignment:
| Q |
18 |
agagagtatgtgtataaataagagaacaca |
47 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
49445074 |
agagagtatgtgtataaataagagaacaca |
49445045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 19607304 - 19607208
Alignment:
| Q |
77 |
attgtaaaggggaaacccttggaggagagattatctcccattctttccta-tttcttagtaaaagtgttctttctattccattcaattgttgggttc |
172 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||| | |||||| || ||||||| | ||| |||||||| |||||||| ||||| ||||||| |
|
|
| T |
19607304 |
attgtgaaggggaaacccttggaggagagattctctcctactctttcttattttcttaattaaattgttctttatattccatccaattactgggttc |
19607208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 11046900 - 11046978
Alignment:
| Q |
71 |
ttgaatattgtaaaggggaaacccttggaggagaga-ttatctcccattctttccta-tttcttagtaaaagtgttctt |
147 |
Q |
| |
|
||||| ||||| |||||||||||||||||| ||||| |||||||| ||||||||||| ||||||| |||||| |||||| |
|
|
| T |
11046900 |
ttgaacattgtgaaggggaaacccttggagtagagatttatctcctattctttcctattttcttaataaaagagttctt |
11046978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 13818895 - 13818793
Alignment:
| Q |
78 |
ttgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttcttaac |
177 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| ||||||||| | || |||||||| | ||||| |||||||| | |||||||| ||||| || |||| |
|
|
| T |
13818895 |
ttgtgaaggggaaacccttgaaggagagattctctcccattttatcatatttcttcatgaaagttttctttctttcgaattcaattcttgggctcctaac |
13818796 |
T |
 |
| Q |
178 |
aat |
180 |
Q |
| |
|
||| |
|
|
| T |
13818795 |
aat |
13818793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0493 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0493
Description:
Target: scaffold0493; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 4234 - 4167
Alignment:
| Q |
66 |
atcttttgaatattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttctta |
133 |
Q |
| |
|
|||||||||||||||| || |||||||||||| |||||||||| || || ||||| || ||||||||| |
|
|
| T |
4234 |
atcttttgaatattgtgaatgggaaacccttgaaggagagattctcccctattctatcatatttctta |
4167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 45249274 - 45249228
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattcttt |
122 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
45249274 |
tattgtgaaggggaaacccttggaggatagattttctcccattcttt |
45249228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 44208595 - 44208508
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaatt |
163 |
Q |
| |
|
|||||| |||||||||| ||||||||| ||||| |||| ||||| || | ||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
44208595 |
tattgtgaaggggaaactcttggaggaaagattctctcttattctatcgtgtttcttaaataaagtattctttctatttcattcaatt |
44208508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 178
Target Start/End: Original strand, 29465695 - 29465797
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttctta |
175 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| ||| ||| || ||||||||| ||||||||||||||||||||||||||| |||| ||| || |
|
|
| T |
29465695 |
tattgtgaaggggaaacggttggaggagagattctcttttcgtctatcatatttcttaaataaagtgttctttctattccattcaattcttggattccta |
29465794 |
T |
 |
| Q |
176 |
aca |
178 |
Q |
| |
|
||| |
|
|
| T |
29465795 |
aca |
29465797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 15047156 - 15047253
Alignment:
| Q |
83 |
aaggggaaacccttggaggagaga-ttatctcccattctttcctatttcttagtaaaagtgttctttctattccattcaattgttgggttcttaacaa |
179 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| ||||||| ||| || | | |||||||||||||||| | || ||||| |||||||| |||||| |
|
|
| T |
15047156 |
aaggggaaacccttggaggagagatttctctcctattcttttctacttatcaataaaagtgttctttctttggaatccaattcttgggttcctaacaa |
15047253 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 29075674 - 29075719
Alignment:
| Q |
75 |
atattgtaaaggggaaacccttggaggagagattatctcccattct |
120 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
29075674 |
atattgtgaaggggaaaaccttggaggagagattatctccaattct |
29075719 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 31673991 - 31674063
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccat--tctttcctatttcttagtaaaagtgttct |
146 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||| ||||| || | | |||||||| ||| |||||||||||| |
|
|
| T |
31673991 |
tattgtgaaggggaaccccttggaggagagattctctcctattatatatcctattttttaataaaagtgttct |
31674063 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 21524218 - 21524262
Alignment:
| Q |
110 |
tctcccattctttccta-tttcttagtaaaagtgttctttctatt |
153 |
Q |
| |
|
||||||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
21524218 |
tctcccattctttcctattttcttaataaatgtgttctttctatt |
21524262 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 21534778 - 21534822
Alignment:
| Q |
110 |
tctcccattctttccta-tttcttagtaaaagtgttctttctatt |
153 |
Q |
| |
|
||||||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
21534778 |
tctcccattctttcctattttcttaataaatgtgttctttctatt |
21534822 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 10525324 - 10525257
Alignment:
| Q |
76 |
tattgtaaaggggaaacccttggaggagagattatctcccattctttcctatttcttagtaaaagtgtt |
144 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||| |||| ||||| ||| |||||||| ||||| |||| |
|
|
| T |
10525324 |
tattgtgaaggggaaacccttg-aggagagattttctcgtattctatccaatttcttaataaaattgtt |
10525257 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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