View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10337_low_1 (Length: 491)
Name: NF10337_low_1
Description: NF10337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10337_low_1 |
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Alignment Details
Target: chr3 (Bit Score: 421; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 15 - 443
Target Start/End: Complemental strand, 7333673 - 7333245
Alignment:
| Q |
15 |
cataggccagctatttggaaagtgtatgtctggaaaaagaaggtggcacgaatattctctaggtggttaaaggagagagtatgtaatgaggtgataggga |
114 |
Q |
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| T |
7333673 |
cataggccagctatttggaaagtttatgtctggaaaaagaaggtggcacgaatattctctaggtggttaaaggagagagtatgtaatgaggtgataggga |
7333574 |
T |
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| Q |
115 |
gtggagacttatctcgggtaggagtcatagactctggtatttccctttgttaattcttttgttgctgtcagagcttttagctcatacttccatcaataaa |
214 |
Q |
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| T |
7333573 |
gtggagacttatctcgggtaggagtcatagactctggtatttccctttgttaattcttttgttgctgtcagagcttttagctcatacttccatcaataaa |
7333474 |
T |
|
| Q |
215 |
atctctattctactgatacttaagttttcggtttctatcattttctagatatataagaaaaaacaaaattcattttaaagttcggttgtaaaacacgaaa |
314 |
Q |
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| T |
7333473 |
atctctattctactgatacttaagttttcggtttctatcattttctagatatataagaaaaaacaaaattcattttaaagttcggttgtaaaacacgaaa |
7333374 |
T |
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| Q |
315 |
catggtgcatcaatcagaattggtccgaattgggttgattctcaactggtttgatttgatagagttcaacttgcaaaccagtttggttttccatgctgaa |
414 |
Q |
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| T |
7333373 |
catggtgcatcaatcagaatcggtccgaattgggttgattctcaactggtttgatttgatagagttcaacttgcaaaccagtttggttttccatgctgaa |
7333274 |
T |
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| Q |
415 |
ctgaaccaaaaccacagttaccgagtaaa |
443 |
Q |
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| T |
7333273 |
ctgaaccaaaaccacagttaccgagtaaa |
7333245 |
T |
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