View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10337_low_7 (Length: 357)
Name: NF10337_low_7
Description: NF10337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10337_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 30580768 - 30581106
Alignment:
| Q |
1 |
tttacacaatcatcattcatcatagaaacataagaaaaaatgcatacaaaaacagattcagaagttacaacaacaagtgtagcaacatcaacatcaccaa |
100 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30580768 |
tttacacaatcattattcatcatagaaacataagaaaaaatgcatacaaaaacagattcagaagttacaacaacaagtgtagcaacatcaacatcaccaa |
30580867 |
T |
|
| Q |
101 |
caagatcaccaccacgtcgtccactatactacgttcaaagtccatcacacgacggtgaaaaaaccgtcactacatccttccattcaacacctgttgcttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30580868 |
caagatcaccaccacgtcgtccactatactacgttcaaagtccatcacacgacggtgaaaaaaccgtcactacatccttccattcaacacctgttgcttc |
30580967 |
T |
|
| Q |
201 |
acctcatcattcttcttcttccactcatttttctgcttctaagaaggaccaacaacatcaacatagtgttaatccatggaagcatattgatgttattgaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30580968 |
acctcatcattcttcttcttccactcatttttctgcttctaagaaggaccaacaacatcaacatagtgttaatccatggaagcatattgatgttattgaa |
30581067 |
T |
|
| Q |
301 |
gaagaagggtttcttgagaaagagaggaatggtggatat |
339 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
30581068 |
gaagaagggtttcttgagaaagagaggaatggtggatat |
30581106 |
T |
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