View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10337_low_8 (Length: 353)
Name: NF10337_low_8
Description: NF10337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10337_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 37 - 346
Target Start/End: Complemental strand, 37288752 - 37288448
Alignment:
| Q |
37 |
catatcatagaataagaaattttagacttgaaaacttagataccgacatacttggatatnnnnnnntaagccgtgagcatgatcaaagactttatttcat |
136 |
Q |
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| T |
37288752 |
catatcatagaataagaaattttagacttgaaaacttagatac-gacatacttggatataaaaaaataagccatgagcatgatcaaagactttatttcat |
37288654 |
T |
|
| Q |
137 |
gtattaaatatgagcttataaataaattatgatgaagccatatatatataaaccaatcaaggtgagatattccaaattgaagacaaaagctgaaacagta |
236 |
Q |
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| T |
37288653 |
gtattaaatatgagcttataaataaattatgatgaagccatatata----aaccaatcaaggtgagatattccaaagtgaagacaaaagctgaaacagta |
37288558 |
T |
|
| Q |
237 |
ttaataagtaggtgtggtagcaaagtgaagacccacatgcatattaaatttgtaatataagnnnnnnngaattaataaactgtaaaataaatacctctaa |
336 |
Q |
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| T |
37288557 |
ttaataagtaggtgtggtagcaaagtgaagacccacatgcatattaaatttgtaatataagaaaaaaagaattaataaactgtaaaataaatacctctaa |
37288458 |
T |
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| Q |
337 |
aacaagtaag |
346 |
Q |
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|||||||||| |
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| T |
37288457 |
aacaagtaag |
37288448 |
T |
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