View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10339_low_21 (Length: 204)

Name: NF10339_low_21
Description: NF10339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10339_low_21
NF10339_low_21
[»] chr1 (3 HSPs)
chr1 (13-204)||(12609843-12610034)
chr1 (17-204)||(15885833-15886020)
chr1 (17-204)||(12636943-12637130)
[»] chr3 (12 HSPs)
chr3 (38-204)||(23036133-23036299)
chr3 (38-204)||(23145883-23146049)
chr3 (38-204)||(23148721-23148887)
chr3 (60-204)||(23024257-23024401)
chr3 (57-204)||(22971933-22972080)
chr3 (30-204)||(23140001-23140175)
chr3 (43-204)||(23039009-23039170)
chr3 (57-204)||(22946386-22946533)
chr3 (38-145)||(23032677-23032784)
chr3 (30-204)||(23017017-23017191)
chr3 (57-204)||(22986259-22986406)
chr3 (35-107)||(22941542-22941614)
[»] scaffold0059 (1 HSPs)
scaffold0059 (42-204)||(62120-62282)
[»] chr6 (2 HSPs)
chr6 (38-204)||(21779776-21779942)
chr6 (57-204)||(12438286-12438433)
[»] scaffold0554 (1 HSPs)
scaffold0554 (35-204)||(6625-6794)
[»] chr2 (1 HSPs)
chr2 (49-123)||(2433634-2433708)
[»] chr5 (5 HSPs)
chr5 (47-123)||(7154485-7154561)
chr5 (48-199)||(31187742-31187893)
chr5 (48-199)||(31225885-31226036)
chr5 (138-204)||(41465812-41465878)
chr5 (48-123)||(31177679-31177754)


Alignment Details
Target: chr1 (Bit Score: 116; Significance: 3e-59; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 12609843 - 12610034
Alignment:
Q  13 acatcaatggaagagcgaactaaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccc 112  Q
    ||||||||| ||| || |||| |||||||||||||||||||||  | |||||||||||||||||||| || || || |||||||||||||||||| ||||    
T  12609843 acatcaatgcaagtgccaactcaacatttatcaaaccaaatgtgctacctggacatattcttcttccagcaccaaagggaatgtactcaaaattattccc 12609942  T
Q  113 tttgtaatcaaaagagctaccgatgaatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    |||||| |||| ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| |||||||||||| ||||||||||    
T  12609943 tttgtagtcaatagagctaccgatgaatctctccggataaaacttctctggttcagtccagtactttggatctcttccaatcgcccatgcat 12610034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 15886020 - 15885833
Alignment:
Q  17 caatggaagagcgaactaaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttg 116  Q
    ||||| ||| || |||| |||||||| |||||||||||||||||| || |||||||||||||| |  || ||||||||||||||||||||| |||||||     
T  15886020 caatgcaagtgccaactcaacatttaccaaaccaaatgttatgcccgggcatattcttcttccagaaccaaaaggaatgtactcaaaattattcccttta 15885921  T
Q  117 taatcaaaagagctaccgatgaatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    || |||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  15885920 tagtcaatagagctaccaatgaatctctctggataaaacctctctggttcagtccaatactttggatctcttccaatcgcccatgcat 15885833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 12636943 - 12637130
Alignment:
Q  17 caatggaagagcgaactaaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttg 116  Q
    ||||| ||| || |||| ||||||||||||||||||||| |||||||| |||||||||||||| || || ||||||||||||||||||||| | ||||||    
T  12636943 caatgcaagtgccaactcaacatttatcaaaccaaatgtgatgcctgggcatattcttcttcctgcaccaaaaggaatgtactcaaaattatttcctttg 12637042  T
Q  117 taatcaaaagagctaccgatgaatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    || |||| ||||||||| ||||||||||| |||| ||||||||| ||||||||||| ||||||| |||||| ||||||| ||||||||    
T  12637043 tagtcaatagagctaccaatgaatctctctggatgaaacctctctggttcagtccagtactttggatctctaccaattgtccatgcat 12637130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 4e-37; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 204
Target Start/End: Original strand, 23036133 - 23036299
Alignment:
Q  38 atttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatg 137  Q
    |||| |||||||||||||  | ||||| ||||||||||||||||| || ||||||||||||||||| ||| |||||||||| |||| || |||  |||||    
T  23036133 atttctcaaaccaaatgtgctccctgggcatattcttcttccggcaccaaaaggaatgtactcaaagttactccctttgtagtcaatagcgctgtcgatg 23036232  T
Q  138 aatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    |||||||| |||||||| ||||| ||||||||||| || |||| ||||||| |||||||||| ||||    
T  23036233 aatctctcgggataaaatctctctggttcagtccagtaatttggatctcttgcaattgcccaagcat 23036299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 38 - 204
Target Start/End: Original strand, 23145883 - 23146049
Alignment:
Q  38 atttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatg 137  Q
    |||| |||||||||||||  | |||||||||||||||||||| || || ||||||||||||||||| ||| ||||||| || |||| |  |||  |||||    
T  23145883 atttgtcaaaccaaatgtgctccctggacatattcttcttccagcaccaaaaggaatgtactcaaagttactccctttatagtcaatatcgctgtcgatg 23145982  T
Q  138 aatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    |||||||| |||||||||||||| ||||||||||| || |||| ||||||| ||| |||||| ||||    
T  23145983 aatctctctggataaaacctctctggttcagtccagtagtttggatctcttgcaactgcccaagcat 23146049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 38 - 204
Target Start/End: Original strand, 23148721 - 23148887
Alignment:
Q  38 atttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatg 137  Q
    |||| ||||||||||| |  | ||||| ||||||||||||||||| || |||||||||||||| || ||| ||||||| || |||| |  |||  | |||    
T  23148721 atttctcaaaccaaatatgctccctgggcatattcttcttccggcaccaaaaggaatgtactcgaagttactccctttatagtcaatatcgctttcaatg 23148820  T
Q  138 aatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    |||||||| |||||||||||||| ||||||||||| || |||||||||||| |||||||||| ||||    
T  23148821 aatctctctggataaaacctctctggttcagtccagtagtttgaatctcttgcaattgcccaagcat 23148887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 60 - 204
Target Start/End: Original strand, 23024257 - 23024401
Alignment:
Q  60 cctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatgaatctctccggataaaacctct 159  Q
    |||||||||||||||| ||| || || |||||||| |||||||| ||| ||||||| || |||| |   ||| ||||||||||||| |||||||||||||    
T  23024257 cctggacatattcttcgtcccgcaccaaaaggaatatactcaaagttactccctttatagtcaatatcactatcgatgaatctctctggataaaacctct 23024356  T
Q  160 caggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    | ||||| ||||| || |||| ||||||| |||||||||| ||||    
T  23024357 ctggttcggtccagtaatttggatctcttgcaattgcccaagcat 23024401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 22971933 - 22972080
Alignment:
Q  57 atgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatgaatctctccggataaaacc 156  Q
    ||||||||||| ||||||||||| || || || ||||||||||||||||| || |||||| |||||| ||| ||| | || ||||| || |||||||||     
T  22971933 atgcctggacaaattcttcttccagcaccaaatggaatgtactcaaaatttgttcctttgaaatcaagagaactatcaataaatctttcaggataaaact 22972032  T
Q  157 tctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    | || || ||||||||||| |||| ||| |||||||||||||| ||||    
T  22972033 tatctggatcagtccaatattttggatcccttccaattgcccaagcat 22972080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 23140001 - 23140175
Alignment:
Q  30 aactaaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagc 129  Q
    |||| ||||||| ||||||||||| |  | ||||| |||||||||| ||| || || ||||||||||||||||||| | ||||||| || |||| || |     
T  23140001 aactcaacatttctcaaaccaaatatgcttcctgggcatattcttcgtcccgcaccaaaaggaatgtactcaaaatcactccctttatagtcaatagtgt 23140100  T
Q  130 taccgatgaatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    | || ||||||||||| ||||||||  |||| ||||||||||| || |||| ||||||  | |||||||||||||    
T  23140101 ttcccatgaatctctctggataaaatttctctggttcagtccagtagtttggatctctcgcgattgcccatgcat 23140175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 204
Target Start/End: Original strand, 23039009 - 23039170
Alignment:
Q  43 tcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatgaatct 142  Q
    |||||||||||||  | ||||| ||||||||||||||||| || ||||||||||||||| ||||| | ||||| || ||||  | |||  | | ||||||    
T  23039009 tcaaaccaaatgtgctccctgggcatattcttcttccggcaccaaaaggaatgtactcataattacttcctttatagtcaatggcgctgtcaaggaatct 23039108  T
Q  143 ctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    ||| |||||||| ||||| || |||||||| || |||| ||||||| |||||||||| ||||    
T  23039109 ctctggataaaatctctccggctcagtccagtaatttggatctcttgcaattgcccaagcat 23039170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 22946386 - 22946533
Alignment:
Q  57 atgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatgaatctctccggataaaacc 156  Q
    ||||| ||||| ||||| |||||||| || || ||||||||||||||||| || |||||| |||||| ||| ||| | || ||||| || |||||||||     
T  22946386 atgcccggacaaattctccttccggcaccaaatggaatgtactcaaaatttgttcctttgaaatcaacagaactatcaataaatctttcaggataaaact 22946485  T
Q  157 tctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    | || || ||||||||||| |||| ||| |||||||||||||| ||||    
T  22946486 tatctggatcagtccaatattttggatcccttccaattgcccaagcat 22946533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 23032677 - 23032784
Alignment:
Q  38 atttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatg 137  Q
    |||| |||||||||||||  | ||||| ||||||||||||||||| || || |||||||||||||||||| | ||||| || |||| || |||  |||||    
T  23032677 atttctcaaaccaaatgtactccctgggcatattcttcttccggcaccaaagggaatgtactcaaaattacttcctttatagtcaatagcgctgtcgatg 23032776  T
Q  138 aatctctc 145  Q
    ||||||||    
T  23032777 aatctctc 23032784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 23017017 - 23017191
Alignment:
Q  30 aactaaacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagc 129  Q
    |||| ||||||| ||||||| |||||  | || || ||||||||||||||  | || ||||||||||| || || ||| ||||||| || |||| |  |     
T  23017017 aactcaacatttctcaaaccgaatgtactcccagggcatattcttcttccaccaccaaaaggaatgtattcgaagttactccctttatagtcaataccgt 23017116  T
Q  130 taccgatgaatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    |  | ||||||||||| ||||||||| |||| ||||||||||| || |||| ||||||| | |||||||| ||||    
T  23017117 tgtcaatgaatctctctggataaaacttctctggttcagtccagtagtttggatctcttgcgattgcccaagcat 23017191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 22986259 - 22986406
Alignment:
Q  57 atgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatgaatctctccggataaaacc 156  Q
    ||||| ||||| ||||| ||||| || || || |||||||||||||||||||| |||||| |||||| ||| ||| | || || ||||| |||||||||     
T  22986259 atgccaggacaaattctccttccagcaccaaatggaatgtactcaaaattagttcctttgaaatcaatagaactatcaataaacctctcaggataaaact 22986358  T
Q  157 tctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    | || || ||| ||||||| || | ||| | |||||| ||||| ||||    
T  22986359 tatcggggtcattccaatatttaggatcccgtccaatggcccaagcat 22986406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 22941614 - 22941542
Alignment:
Q  35 aacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaatta 107  Q
    |||||| | ||||||||||||||  || ||||| ||||||||||| || || || |||||| |||||||||||    
T  22941614 aacattgaccaaaccaaatgttactcccggacacattcttcttccagcaccaaatggaatgaactcaaaatta 22941542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 42 - 204
Target Start/End: Original strand, 62120 - 62282
Alignment:
Q  42 atcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatgaatc 141  Q
    |||||||||||| |  ||||||| ||||||||| |||| || || |||||||||||||| |||||| |||| ||||| |||| ||| ||||| |||||||    
T  62120 atcaaaccaaatttactgcctgggcatattctttttccagcaccaaaaggaatgtactcgaaattattcccgttgtagtcaatagaactaccaatgaatc 62219  T
Q  142 tctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    |||| |||||||||||||| ||||| ||||| ||| ||| ||||||||| |||||||||||||    
T  62220 tctctggataaaacctctctggttccgtccagtaccttggatctcttccgattgcccatgcat 62282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 2e-32; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 38 - 204
Target Start/End: Original strand, 21779776 - 21779942
Alignment:
Q  38 atttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatg 137  Q
    |||| |||||||||||||  | ||||| ||||||||||||||||| || || |||||||||||||||||| |||||||  | |||| |  |||| |||||    
T  21779776 atttctcaaaccaaatgtgctccctgggcatattcttcttccggcaccaaatggaatgtactcaaaattactccctttaaagtcaatatcgctatcgatg 21779875  T
Q  138 aatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    |||||||| ||||||||| |||| ||||||||||| || |||| ||||||| |||||||||| ||||    
T  21779876 aatctctctggataaaacatctctggttcagtccagtagtttggatctcttgcaattgcccaagcat 21779942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 12438286 - 12438433
Alignment:
Q  57 atgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatgaatctctccggataaaacc 156  Q
    ||||| ||||| ||||||||||| || || ||||| ||  |||| ||||||| ||||||||||||||  |  | | | || |||||||| |||| ||||     
T  12438286 atgccgggacacattcttcttccagcaccaaaaggtataaactcgaaattagaccctttgtaatcaattggacaatcaataaatctctcaggattaaact 12438385  T
Q  157 tctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    | ||   |||| ||||||||||||  ||||||||||||||||||||||    
T  12438386 tttctccttcattccaatactttgggtctcttccaattgcccatgcat 12438433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 6794 - 6625
Alignment:
Q  35 aacatttatcaaaccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccg 134  Q
    ||||||| ||||||||||| |  | ||||| || ||||||||||| || || |||||||||||||||||||||  |||||| || |||| || |||  |     
T  6794 aacatttctcaaaccaaatatacttcctgggcaaattcttcttccagcaccaaaaggaatgtactcaaaattaccccctttatagtcaatagtgctgtca 6695  T
Q  135 atgaatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
     |||||||||| |||||||||||||| |||||||||||  | |||| ||||||| |||||||||| ||||    
T  6694 gtgaatctctctggataaaacctctctggttcagtccagaagtttggatctcttgcaattgcccaagcat 6625  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 2433708 - 2433634
Alignment:
Q  49 caaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaa 123  Q
    ||||||| || |||||||||||||| ||||| || || ||||| |||||||||||||||| ||||||||||||||    
T  2433708 caaatgtgattcctggacatattctccttcctgcaccaaaaggtatgtactcaaaattagaccctttgtaatcaa 2433634  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 7154561 - 7154485
Alignment:
Q  47 accaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaa 123  Q
    ||||||||  ||||||||||| ||||||||||| || || |||||||| |||||||||||| | |||||| ||||||    
T  7154561 accaaatgacatgcctggacacattcttcttccagcaccaaaaggaatatactcaaaattatttcctttgaaatcaa 7154485  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 31187742 - 31187893
Alignment:
Q  48 ccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatgaatctctccg 147  Q
    |||||||  ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || |||||| ||||||  | ||||  ||  || ||||| |    
T  31187742 ccaaatgccatgcctggacacattcttcttccagcaccgaacggtatgtattcaaaatttgtgcctttgaaatcaattgtgctattgagaaacctctcag 31187841  T
Q  148 gataaaacctctcaggttcagtccaatactttgaatctcttccaattgccca 199  Q
    | | ||| ||||||| ||| | ||||||| ||  ||||||||||||||||||    
T  31187842 gtttaaaactctcagcttctgcccaatacctttcatctcttccaattgccca 31187893  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 31226036 - 31225885
Alignment:
Q  48 ccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaaaagagctaccgatgaatctctccg 147  Q
    |||||||  ||||||||||| ||||||||||| || ||||| || ||||| |||||||| || |||||| ||||||  | ||||  ||  || ||||| |    
T  31226036 ccaaatgccatgcctggacacattcttcttccagcaccgaacggtatgtattcaaaatttgtgcctttgaaatcaattgtgctattgagaaacctctcag 31225937  T
Q  148 gataaaacctctcaggttcagtccaatactttgaatctcttccaattgccca 199  Q
    | | ||| ||||||| ||| | ||||||| ||  ||||||||||||||||||    
T  31225936 gtttaaaactctcagcttctgcccaatacctttcatctcttccaattgccca 31225885  T

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Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 41465878 - 41465812
Alignment:
Q  138 aatctctccggataaaacctctcaggttcagtccaatactttgaatctcttccaattgcccatgcat 204  Q
    ||||||||||||  |||| | || |||||| |||||||||||| |||||||||||| ||||||||||    
T  41465878 aatctctccggaataaacttttccggttcactccaatactttggatctcttccaatcgcccatgcat 41465812  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 31177679 - 31177754
Alignment:
Q  48 ccaaatgttatgcctggacatattcttcttccggcgccgaaaggaatgtactcaaaattagtccctttgtaatcaa 123  Q
    |||||||  ||||||||||| ||||||||||| || ||||| || ||||||||||| || || |||||| ||||||    
T  31177679 ccaaatgccatgcctggacacattcttcttccagcaccgaacggtatgtactcaaagtttgtacctttgaaatcaa 31177754  T

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