View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1033_low_6 (Length: 201)
Name: NF1033_low_6
Description: NF1033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1033_low_6 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 40982908 - 40983023
Alignment:
| Q |
85 |
cacagagaccagatatatcaggctttgacaagagtttggtactcttgggcatgccatgcagtttcttttgtttcggaatttgtttcttcattacagctgc |
184 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40982908 |
cacagagaccagatatatcaggctttgacaagagtttggtactcttgggcatgccatgcagtttcttttgtttcggaatttgtttcttcattacagctgc |
40983007 |
T |
|
| Q |
185 |
tcctgtcatttcatcg |
200 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
40983008 |
tcctgtcatttcatcg |
40983023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University