View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10341_high_9 (Length: 242)
Name: NF10341_high_9
Description: NF10341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10341_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 45523686 - 45523895
Alignment:
| Q |
19 |
cctttgtccaaattagaatcaaaatcagaaactattttcttcaaaggctcctcaatacattcaaacccattattattactaccagcaaacgtatccttac |
118 |
Q |
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| T |
45523686 |
cctttgtccaaattagaatcaaaatcagaaactattttcttcaaaggctcctcaatacattcaaacccattattattactaccagcaaacgtatccttac |
45523785 |
T |
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| Q |
119 |
acaatctccgcgaaataacaaaacaatgaaaaaatttgtggacgacccttttccttaaacgtaaaagggctattgaattcatggttagaattccaaccca |
218 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
45523786 |
acaatctccgtgaaataacaaaacaatgaaaaaatttgtggacgacccttttccttaaacctaaaagggctattgaattcatggttagaattccaaccca |
45523885 |
T |
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| Q |
219 |
tcatctctgc |
228 |
Q |
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|||||||||| |
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| T |
45523886 |
tcatctctgc |
45523895 |
T |
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