View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10341_low_11 (Length: 329)

Name: NF10341_low_11
Description: NF10341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10341_low_11
NF10341_low_11
[»] chr1 (59 HSPs)
chr1 (5-176)||(9253543-9253713)
chr1 (176-329)||(49102787-49102940)
chr1 (176-329)||(6538100-6538255)
chr1 (182-329)||(25561137-25561286)
chr1 (223-329)||(50097727-50097835)
chr1 (236-329)||(43530171-43530266)
chr1 (226-329)||(10618936-10619041)
chr1 (18-166)||(9321325-9321478)
chr1 (182-329)||(36886982-36887132)
chr1 (257-329)||(52073352-52073426)
chr1 (179-325)||(17556909-17557058)
chr1 (186-329)||(5883426-5883572)
chr1 (18-133)||(9351642-9351756)
chr1 (182-329)||(43036141-43036291)
chr1 (179-329)||(41432577-41432730)
chr1 (235-329)||(24436804-24436900)
chr1 (235-329)||(34738428-34738524)
chr1 (180-325)||(50084244-50084391)
chr1 (256-329)||(17416611-17416686)
chr1 (182-274)||(45752073-45752165)
chr1 (253-329)||(1278582-1278660)
chr1 (253-325)||(51303065-51303139)
chr1 (178-329)||(35619330-35619482)
chr1 (270-329)||(40136131-40136192)
chr1 (255-329)||(30543255-30543331)
chr1 (235-329)||(36325828-36325924)
chr1 (235-329)||(12625698-12625791)
chr1 (239-329)||(36385452-36385543)
chr1 (182-329)||(50587146-50587295)
chr1 (224-286)||(19258935-19258997)
chr1 (258-329)||(33579366-33579439)
chr1 (240-329)||(32123575-32123664)
chr1 (248-329)||(9861203-9861285)
chr1 (241-329)||(28848677-28848767)
chr1 (253-325)||(38958079-38958153)
chr1 (244-286)||(13044468-13044510)
chr1 (260-323)||(26345744-26345809)
chr1 (246-325)||(34551971-34552052)
chr1 (266-325)||(35604172-35604232)
chr1 (296-329)||(28217478-28217511)
chr1 (295-327)||(34141643-34141675)
chr1 (236-325)||(36269860-36269950)
chr1 (238-294)||(50598867-50598923)
chr1 (255-319)||(718466-718532)
chr1 (261-329)||(42161951-42162021)
chr1 (180-294)||(47742695-47742810)
chr1 (253-329)||(50476641-50476719)
chr1 (269-329)||(50915851-50915913)
chr1 (175-213)||(1278344-1278382)
chr1 (295-325)||(33643752-33643782)
chr1 (245-328)||(36269308-36269393)
chr1 (184-305)||(69868-69992)
chr1 (244-328)||(5970318-5970408)
chr1 (255-329)||(34749907-34749983)
chr1 (180-213)||(39125262-39125295)
chr1 (261-329)||(2175447-2175518)
chr1 (270-321)||(7915637-7915689)
chr1 (236-313)||(39125315-39125392)
chr1 (264-329)||(51246475-51246542)
[»] chr3 (51 HSPs)
chr3 (178-329)||(53888600-53888753)
chr3 (180-318)||(3333988-3334128)
chr3 (178-329)||(35283200-35283354)
chr3 (182-329)||(32720908-32721050)
chr3 (185-286)||(54089666-54089768)
chr3 (186-329)||(46891499-46891645)
chr3 (235-329)||(1132807-1132903)
chr3 (182-329)||(27681916-27682066)
chr3 (238-329)||(2927957-2928050)
chr3 (235-329)||(30697484-30697578)
chr3 (178-319)||(9773534-9773676)
chr3 (227-329)||(48444618-48444721)
chr3 (213-329)||(36637913-36638031)
chr3 (177-329)||(40674220-40674375)
chr3 (178-329)||(3537319-3537473)
chr3 (197-319)||(9768300-9768424)
chr3 (235-318)||(50201692-50201777)
chr3 (255-329)||(4247230-4247306)
chr3 (235-329)||(32858943-32859038)
chr3 (255-328)||(18257600-18257675)
chr3 (180-272)||(40118717-40118809)
chr3 (237-329)||(50345483-50345578)
chr3 (182-328)||(29623350-29623497)
chr3 (255-329)||(13638539-13638616)
chr3 (266-329)||(31651348-31651413)
chr3 (235-329)||(54748424-54748525)
chr3 (243-329)||(517512-517600)
chr3 (235-325)||(3457470-3457564)
chr3 (181-329)||(5939598-5939749)
chr3 (260-329)||(49304321-49304391)
chr3 (236-304)||(53620359-53620429)
chr3 (255-329)||(54089346-54089423)
chr3 (246-329)||(38401802-38401887)
chr3 (255-329)||(15499191-15499267)
chr3 (235-329)||(30996189-30996285)
chr3 (243-329)||(34729218-34729305)
chr3 (255-329)||(42134582-42134658)
chr3 (243-325)||(51686623-51686707)
chr3 (253-329)||(42157707-42157786)
chr3 (222-294)||(42261609-42261681)
chr3 (294-325)||(7965133-7965164)
chr3 (266-325)||(11500219-11500281)
chr3 (261-329)||(17642702-17642772)
chr3 (181-329)||(33281540-33281683)
chr3 (180-227)||(46017098-46017145)
chr3 (295-329)||(19148280-19148314)
chr3 (255-326)||(23568179-23568252)
chr3 (235-325)||(54126377-54126469)
chr3 (264-329)||(30131787-30131854)
chr3 (253-329)||(32708838-32708913)
chr3 (178-218)||(33944454-33944494)
[»] chr2 (50 HSPs)
chr2 (182-317)||(15803297-15803435)
chr2 (208-329)||(11522026-11522148)
chr2 (179-321)||(31584582-31584727)
chr2 (235-329)||(36030906-36031002)
chr2 (235-329)||(12941669-12941765)
chr2 (255-329)||(30523390-30523466)
chr2 (235-328)||(16625677-16625771)
chr2 (179-315)||(27987793-27987931)
chr2 (179-315)||(28074326-28074464)
chr2 (255-327)||(30265251-30265325)
chr2 (184-329)||(36870356-36870499)
chr2 (256-329)||(4666248-4666323)
chr2 (235-327)||(5322000-5322095)
chr2 (237-325)||(16465032-16465123)
chr2 (255-327)||(33206901-33206976)
chr2 (253-329)||(32761176-32761254)
chr2 (262-329)||(9087597-9087666)
chr2 (253-327)||(41503269-41503346)
chr2 (236-329)||(5002659-5002755)
chr2 (255-325)||(26618497-26618569)
chr2 (255-327)||(32950991-32951066)
chr2 (235-328)||(38325218-38325316)
chr2 (235-323)||(39819958-39820049)
chr2 (195-329)||(1270533-1270671)
chr2 (253-329)||(3254728-3254806)
chr2 (295-329)||(3022808-3022842)
chr2 (179-329)||(13018293-13018446)
chr2 (255-329)||(14385193-14385269)
chr2 (254-329)||(29880877-29880954)
chr2 (295-329)||(39913386-39913420)
chr2 (295-329)||(42946658-42946692)
chr2 (243-324)||(7367695-7367779)
chr2 (253-329)||(39670072-39670147)
chr2 (265-329)||(13767531-13767597)
chr2 (297-329)||(17514933-17514965)
chr2 (236-325)||(26599128-26599219)
chr2 (260-329)||(44656647-44656718)
chr2 (253-328)||(16518979-16519056)
chr2 (260-329)||(26427645-26427718)
chr2 (179-218)||(31083025-31083064)
chr2 (261-329)||(31550160-31550230)
chr2 (245-329)||(34757719-34757805)
chr2 (295-329)||(9087399-9087433)
chr2 (255-321)||(10820660-10820729)
chr2 (243-329)||(39205130-39205218)
chr2 (301-329)||(1408978-1409006)
chr2 (260-329)||(4003521-4003592)
chr2 (269-329)||(6584724-6584787)
chr2 (182-230)||(14008147-14008195)
chr2 (284-329)||(38216438-38216485)
[»] chr4 (55 HSPs)
chr4 (182-329)||(40422891-40423041)
chr4 (206-329)||(28880104-28880229)
chr4 (180-321)||(31418776-31418916)
chr4 (210-329)||(18397026-18397148)
chr4 (210-329)||(18399714-18399836)
chr4 (186-329)||(55813453-55813595)
chr4 (235-329)||(6836513-6836608)
chr4 (179-329)||(48620402-48620546)
chr4 (185-325)||(13984796-13984937)
chr4 (182-304)||(42650772-42650895)
chr4 (235-329)||(42759524-42759619)
chr4 (246-329)||(46669827-46669913)
chr4 (257-329)||(49936615-49936689)
chr4 (222-329)||(21443135-21443244)
chr4 (197-328)||(46176772-46176904)
chr4 (243-329)||(30307482-30307569)
chr4 (253-329)||(45022427-45022505)
chr4 (227-324)||(9119112-9119210)
chr4 (256-329)||(34713066-34713137)
chr4 (185-277)||(6121430-6121523)
chr4 (255-329)||(15451229-15451305)
chr4 (255-329)||(24662639-24662715)
chr4 (256-329)||(18318888-18318963)
chr4 (245-329)||(24802673-24802759)
chr4 (235-285)||(27143379-27143429)
chr4 (229-325)||(42954725-42954823)
chr4 (255-325)||(8828102-8828174)
chr4 (235-325)||(9021051-9021143)
chr4 (253-319)||(25843959-25844026)
chr4 (185-329)||(41495461-41495608)
chr4 (228-329)||(47063795-47063898)
chr4 (262-329)||(4441921-4441991)
chr4 (261-329)||(32648902-32648972)
chr4 (182-329)||(38136652-38136802)
chr4 (255-329)||(27485154-27485231)
chr4 (295-329)||(53013700-53013734)
chr4 (253-294)||(38644636-38644677)
chr4 (250-286)||(3075651-3075687)
chr4 (254-326)||(39089739-39089814)
chr4 (235-283)||(52430418-52430466)
chr4 (244-329)||(54205982-54206069)
chr4 (246-329)||(368170-368256)
chr4 (261-329)||(904310-904380)
chr4 (294-329)||(32579288-32579323)
chr4 (253-329)||(37662756-37662834)
chr4 (261-329)||(41844548-41844618)
chr4 (295-329)||(516168-516202)
chr4 (295-329)||(27143291-27143325)
chr4 (266-329)||(31428914-31428978)
chr4 (185-251)||(40424316-40424382)
chr4 (295-329)||(47047416-47047450)
chr4 (255-294)||(34236429-34236469)
chr4 (182-230)||(35959382-35959430)
chr4 (178-218)||(41363985-41364025)
chr4 (295-327)||(54240624-54240656)
[»] chr7 (46 HSPs)
chr7 (181-329)||(22556522-22556672)
chr7 (226-329)||(33187710-33187815)
chr7 (236-329)||(4787875-4787971)
chr7 (235-329)||(38138044-38138140)
chr7 (182-329)||(6746400-6746547)
chr7 (182-329)||(23465818-23465968)
chr7 (237-329)||(31055465-31055560)
chr7 (259-329)||(374432-374504)
chr7 (235-329)||(14676343-14676439)
chr7 (180-328)||(42112774-42112926)
chr7 (230-327)||(44487202-44487301)
chr7 (260-329)||(45510455-45510526)
chr7 (182-329)||(38505162-38505312)
chr7 (184-329)||(36907396-36907544)
chr7 (179-286)||(41471601-41471709)
chr7 (235-294)||(40985271-40985330)
chr7 (266-329)||(24923297-24923362)
chr7 (186-329)||(21687546-21687693)
chr7 (255-329)||(43230088-43230164)
chr7 (237-327)||(46611757-46611849)
chr7 (264-325)||(41714110-41714173)
chr7 (235-286)||(23552335-23552386)
chr7 (277-329)||(31770252-31770306)
chr7 (185-284)||(32228928-32229031)
chr7 (295-329)||(38987506-38987540)
chr7 (235-329)||(43348111-43348207)
chr7 (235-329)||(45066836-45066931)
chr7 (275-326)||(35489904-35489956)
chr7 (253-329)||(17818399-17818477)
chr7 (261-329)||(28437440-28437510)
chr7 (223-286)||(30081531-30081594)
chr7 (261-329)||(33810110-33810180)
chr7 (178-286)||(35682744-35682854)
chr7 (253-325)||(38991363-38991437)
chr7 (294-329)||(42593060-42593095)
chr7 (261-325)||(46509382-46509448)
chr7 (178-324)||(48775922-48776063)
chr7 (226-272)||(1278094-1278140)
chr7 (246-325)||(30081089-30081170)
chr7 (238-328)||(425634-425728)
chr7 (255-329)||(32650283-32650359)
chr7 (255-329)||(36845333-36845409)
chr7 (237-286)||(38679864-38679913)
chr7 (255-329)||(42266899-42266975)
chr7 (211-274)||(23128123-23128187)
chr7 (266-329)||(37334840-37334901)
[»] chr8 (43 HSPs)
chr8 (179-329)||(1839635-1839788)
chr8 (178-329)||(10878599-10878750)
chr8 (190-327)||(9054337-9054477)
chr8 (235-329)||(32158878-32158974)
chr8 (186-329)||(8948738-8948882)
chr8 (254-329)||(13258599-13258676)
chr8 (243-329)||(27085461-27085550)
chr8 (235-324)||(35376511-35376601)
chr8 (182-329)||(29584287-29584437)
chr8 (255-325)||(3394078-3394150)
chr8 (255-325)||(37388396-37388468)
chr8 (253-328)||(39194045-39194123)
chr8 (255-329)||(40984968-40985042)
chr8 (235-325)||(42589730-42589823)
chr8 (182-329)||(10589917-10590062)
chr8 (267-329)||(13537455-13537519)
chr8 (267-329)||(13627003-13627067)
chr8 (179-328)||(31150016-31150167)
chr8 (253-329)||(16424251-16424329)
chr8 (229-304)||(28416043-28416118)
chr8 (183-284)||(23963167-23963272)
chr8 (255-329)||(35616673-35616749)
chr8 (255-329)||(35856422-35856498)
chr8 (253-326)||(5158927-5159002)
chr8 (256-329)||(11742634-11742709)
chr8 (226-286)||(31305639-31305699)
chr8 (253-321)||(39418172-39418242)
chr8 (235-329)||(32266-32365)
chr8 (255-324)||(5941181-5941253)
chr8 (184-264)||(13406754-13406835)
chr8 (245-329)||(13369799-13369888)
chr8 (266-329)||(32502946-32503010)
chr8 (180-294)||(11226218-11226333)
chr8 (235-329)||(26042346-26042438)
chr8 (270-325)||(6038098-6038155)
chr8 (295-329)||(7079928-7079962)
chr8 (295-329)||(35353940-35353974)
chr8 (234-329)||(41540372-41540468)
chr8 (179-228)||(1840027-1840076)
chr8 (255-329)||(15108156-15108232)
chr8 (235-325)||(38404458-38404550)
chr8 (235-294)||(4266656-4266713)
chr8 (192-276)||(5935330-5935414)
[»] chr5 (49 HSPs)
chr5 (182-329)||(1934925-1935075)
chr5 (181-329)||(3936397-3936548)
chr5 (178-316)||(15917518-15917659)
chr5 (182-329)||(4841526-4841677)
chr5 (178-329)||(9684605-9684759)
chr5 (185-329)||(39011944-39012088)
chr5 (255-329)||(31632947-31633023)
chr5 (181-329)||(3081150-3081300)
chr5 (235-329)||(9096424-9096519)
chr5 (255-329)||(19389720-19389796)
chr5 (253-329)||(3924746-3924824)
chr5 (235-327)||(35704727-35704821)
chr5 (235-329)||(32824761-32824858)
chr5 (235-329)||(12063854-12063954)
chr5 (255-329)||(17668026-17668102)
chr5 (177-325)||(19337041-19337189)
chr5 (255-329)||(28523731-28523807)
chr5 (268-328)||(1175851-1175913)
chr5 (181-286)||(21916121-21916228)
chr5 (262-325)||(27350905-27350970)
chr5 (242-329)||(35704925-35705014)
chr5 (246-329)||(37909104-37909188)
chr5 (255-329)||(35042317-35042393)
chr5 (244-329)||(15399928-15400015)
chr5 (253-329)||(22114818-22114897)
chr5 (246-329)||(8944158-8944244)
chr5 (255-329)||(344147-344225)
chr5 (245-325)||(6373255-6373338)
chr5 (267-323)||(5696486-5696544)
chr5 (261-329)||(26149716-26149786)
chr5 (179-245)||(35708610-35708677)
chr5 (261-329)||(35868943-35869013)
chr5 (253-328)||(1176394-1176471)
chr5 (295-329)||(5088804-5088838)
chr5 (295-329)||(6491297-6491331)
chr5 (295-329)||(7147508-7147542)
chr5 (294-324)||(14157136-14157166)
chr5 (295-329)||(26018854-26018888)
chr5 (295-325)||(28154807-28154837)
chr5 (295-325)||(29709627-29709657)
chr5 (295-329)||(29799750-29799784)
chr5 (184-225)||(6373368-6373409)
chr5 (190-251)||(7782583-7782644)
chr5 (267-324)||(31535219-31535276)
chr5 (255-329)||(33682485-33682561)
chr5 (253-328)||(4342964-4343040)
chr5 (256-329)||(6632761-6632836)
chr5 (256-329)||(12097016-12097091)
chr5 (259-324)||(15060093-15060160)
[»] chr6 (28 HSPs)
chr6 (182-329)||(33677136-33677285)
chr6 (185-329)||(33184279-33184426)
chr6 (186-329)||(8439219-8439363)
chr6 (235-325)||(597007-597099)
chr6 (183-321)||(25073078-25073220)
chr6 (234-329)||(2523505-2523600)
chr6 (235-285)||(2502196-2502246)
chr6 (255-329)||(16329492-16329568)
chr6 (255-329)||(26683430-26683505)
chr6 (255-329)||(33939016-33939091)
chr6 (255-329)||(20381762-20381834)
chr6 (295-329)||(4465039-4465073)
chr6 (255-329)||(13120313-13120390)
chr6 (236-329)||(6695408-6695504)
chr6 (267-325)||(32222119-32222179)
chr6 (255-325)||(32549696-32549768)
chr6 (268-329)||(22817246-22817309)
chr6 (253-329)||(33590219-33590297)
chr6 (295-329)||(2502300-2502334)
chr6 (182-278)||(4465077-4465175)
chr6 (295-329)||(6855764-6855798)
chr6 (274-329)||(26289664-26289721)
chr6 (190-251)||(8559185-8559246)
chr6 (243-329)||(9104826-9104913)
chr6 (179-216)||(28551722-28551759)
chr6 (10-51)||(31865188-31865229)
chr6 (182-230)||(5825547-5825595)
chr6 (260-329)||(24734993-24735064)
[»] scaffold0632 (1 HSPs)
scaffold0632 (182-329)||(1894-2045)
[»] scaffold1763 (1 HSPs)
scaffold1763 (255-329)||(496-572)
[»] scaffold0245 (2 HSPs)
scaffold0245 (253-329)||(4259-4337)
scaffold0245 (175-213)||(4021-4059)
[»] scaffold0229 (2 HSPs)
scaffold0229 (253-329)||(4590-4668)
scaffold0229 (175-213)||(4352-4390)
[»] scaffold0006 (1 HSPs)
scaffold0006 (178-329)||(59668-59829)
[»] scaffold0119 (2 HSPs)
scaffold0119 (243-329)||(30566-30655)
scaffold0119 (243-329)||(37234-37323)
[»] scaffold0373 (1 HSPs)
scaffold0373 (235-280)||(8979-9024)
[»] scaffold0717 (1 HSPs)
scaffold0717 (261-329)||(1691-1761)
[»] scaffold0350 (1 HSPs)
scaffold0350 (270-325)||(1428-1485)
[»] scaffold0927 (1 HSPs)
scaffold0927 (253-328)||(2798-2877)
[»] scaffold0024 (1 HSPs)
scaffold0024 (255-329)||(44869-44945)


Alignment Details
Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 9253713 - 9253543
Alignment:
Q  5 tatccctcactgttctctggctctgcgtatcagcattgcaatcactatagcaaacgagggtgggaattataaaacctggaagaaacgatgattttcacca 104  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||| || | || |||||||||  ||| |||||||| |||| |    
T  9253713 tatctctcgctgttctctggctctgcgtatcagcattgaaatcactatagcaaaggagggtagggaata-aaaacctggcggaaccgatgattgtcacaa 9253615  T
Q  105 cccaaaagaattataggtaaaggaggaagtgagttcggtagtggtgtgcgagagaacagctatgattagagc 176  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||| ||| |||||    
T  9253614 cccaatagaattataggtaacggaggaagtaagttcggtagtggtttgcgagagaacggctacgatcagagc 9253543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 176 - 329
Target Start/End: Original strand, 49102787 - 49102940
Alignment:
Q  176 cgacttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttga 274  Q
    ||||| |||||||||||||||||||||| || ||||||||||| | ||||||||| | | |||||||||| |||||| ||||||||||||||||||||||    
T  49102787 cgactaaggctttgtttgggagtttggaggggaggggaaggaagggctttggggggagagaaatatagggaaaaattgagaaatctttcacattttttga 49102886  T
Q  275 aagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||| |||||  |||||||||| |||||||| |||||||||||||||    
T  49102887 aagagtatttttttagagtgataaattaat-tttatgatgaatatatttttaatt 49102940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 176 - 329
Target Start/End: Complemental strand, 6538255 - 6538100
Alignment:
Q  176 cgacttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaa 275  Q
    ||||||||| ||||||||| |||||| | || | ||||||||| |||||||  ||| ||||||| ||||||||||| |||||||||||| ||||||||||    
T  6538255 cgacttaggttttgtttggaagtttgaaggggaagggaaggaaagactttgaaggagataaatacaggggaaaattgagaaatctttcatattttttgaa 6538156  T
Q  276 agagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| ||||||   |||||| ||||||||| ||||||||||||||||||    
T  6538155 agagtatttttttagagagtgataaatcaatgtttataattaatatatttttaatt 6538100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 25561137 - 25561286
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagta 281  Q
    |||||||||||| ||||||| |  ||| ||||| ||| | |||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||||    
T  25561137 aggctttgtttgcgagtttgtagcgaaagggaatgaaaggctttgggggagagaaatatagaggaaaattgagaaatctttcacattttttgaaagagta 25561236  T
Q  282 tttttgta--gagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| ||  |||  |||| |||||| |||||||||||||||||||||||    
T  25561237 tttttttagcgagtgataagttaatgcttatgattaatatatttttaatt 25561286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 223 - 329
Target Start/End: Complemental strand, 50097835 - 50097727
Alignment:
Q  223 tttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatata 320  Q
    ||||||| ||| ||||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||||    
T  50097835 tttggggaacaaaaatataaggaaaaattgagaaatctttcacattttttgaaagagtatttttttagagagtgataaattattgtttatgattaatata 50097736  T
Q  321 tttttaatt 329  Q
    |||||||||    
T  50097735 tttttaatt 50097727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 43530171 - 43530266
Alignment:
Q  236 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||   ||||||||||| |||||||||||||||||||||||    
T  43530171 aatataggggaaaattgagaaatctttcacattttttaaaagagtgtttttttagagagtgataaattaatgcttatgattaatatatttttaatt 43530266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 329
Target Start/End: Complemental strand, 10619041 - 10618936
Alignment:
Q  226 gggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatattt 323  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| |||||| || ||||| ||||||   |||||| |||| |||||||||||||||||    
T  10619041 gggggacataaatatatgggaaaattgagaaatctttcacattttctgaaagggtctttttttagagagtgataaatgaatgcttatgattaatatattt 10618942  T
Q  324 ttaatt 329  Q
    ||||||    
T  10618941 ttaatt 10618936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 9321325 - 9321478
Alignment:
Q  18 tctctggctctgcgtatcagcattgcaatcactatagcaaacgagggtgggaattataaaacctggaagaaacgatgattttcaccacccaaaagaatta 117  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||| || | || |||||||||  ||| |||||||| ||||| ||||| | |||||    
T  9321325 tctctggctctgcgtatcagcattccaatcactgtagcaaaggagggtcgggaata-aaaacctggcggaaccgatgattgtcaccgcccaacataatta 9321423  T
Q  118 taggtaaaggaggaa------gtgagttcggtagtggtgtgcgagagaacagcta 166  Q
     ||| ||||||||||      || ||||||||||||||||| |||||||| ||||    
T  9321424 caggcaaaggaggaagaggatgttagttcggtagtggtgtgtgagagaacggcta 9321478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 36887132 - 36886982
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||| ||||    |||||   ||||||||  |||||||||||| ||||||| |||| ||    
T  36887132 aggctttgtttgcgagtttggagggaaggggaaggaaagactttgaggggtggaaaatacgagggaaaatgaagaaatctttcaaattttttaaaagtgt 36887033  T
Q  281 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    | |||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  36887032 agttttttagagaatgataaattaatgcatatgattactatatttttaatt 36886982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 52073352 - 52073426
Alignment:
Q  257 atctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||| |||| |||||||  ||||||||| |||||||||||||||||||||||||    
T  52073352 atctttcacattttttgaaagagtaattttttagagaatgataaattaacgtttatgattaatatatttttaatt 52073426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 17557058 - 17556909
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    ||||| |||| |||||||||||||| || ||||||||||| | ||||| | ||| | |||||||||| |||||  |||||||||||||||||||| ||||    
T  17557058 cttagactttctttgggagtttggaggggaggggaaggaaaggctttgcgaggatagaaatatagggaaaaatagagaaatctttcacatttttttaaag 17556959  T
Q  278 agtatttttgtagaga--aataaattaatgtttatgattaatatattttt 325  Q
    ||| ||||  ||||||   |||||||||||   |||||||||||||||||    
T  17556958 agtgttttcttagagagtgataaattaatgcggatgattaatatattttt 17556909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 5883426 - 5883572
Alignment:
Q  186 tttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 284  Q
    |||||||| ||||||||| ||||||| || |||||  |||| ||||  | |||||||||  |||||| |||||| ||||| ||||||||||||||| |||    
T  5883426 tttgtttgagagtttggagggaagggaaaagaatggttttgaggggtgaaaaatataggaaaaaattgagaaatttttcatattttttgaaagagtcttt 5883525  T
Q  285 ttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    |  ||||||   ||||||||||  |||||||||||||||||||||||    
T  5883526 tgttagagagtgataaattaatacttatgattaatatatttttaatt 5883572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 9351642 - 9351756
Alignment:
Q  18 tctctggctctgcgtatcagcattgcaatcactatagcaaacgagggtgggaattataaaacctggaagaaacgatgattttcaccacccaaaagaatta 117  Q
    ||||| |||||||||||||||||| |||||||| ||||||| ||||||||| | || |||||||||  ||| |||||||| ||||| ||||| | |||||    
T  9351642 tctctagctctgcgtatcagcattccaatcactgtagcaaaggagggtggggaata-aaaacctggcggaaccgatgattgtcaccgcccaacataatta 9351740  T
Q  118 taggtaaaggaggaag 133  Q
     ||| |||||||||||    
T  9351741 caggcaaaggaggaag 9351756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 43036141 - 43036291
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||||||||||||| || ||||||||||| | ||||| ||||  | ||||| | ||||||||| | |||||||| ||||||| |  ||||||    
T  43036141 aggctttgtttgggagtttggaggggaggggaaggaagggctttgtggggtgagaaatagaagggaaaattgaaaaatcttttacattttcttgaagagt 43036240  T
Q  281 atttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||  |||||   |||||||||   |||||||||||||||||||||||    
T  43036241 attttttcagagagtgataaattaagacttatgattaatatatttttaatt 43036291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 329
Target Start/End: Original strand, 41432577 - 41432730
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    ||||||||||||||||||||||||| || | ||||| ||| | |||||| |||    ||||| |||||||| |    ||||||||||| ||||||| |||    
T  41432577 cttaggctttgtttgggagtttggaggggaagggaaagaaaggctttggagggttggaaatacaggggaaattggtaaaatctttcacgttttttgcaag 41432676  T
Q  278 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| |||| |||||||  ||||||||||  |||||||||||||||||||||||    
T  41432677 agtaattttttagagaataataaattaatacttatgattaatatatttttaatt 41432730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 24436804 - 24436900
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| ||||||||||| |||||| |||||  ||||||| ||||| |||||| ||||||   |||||||||||||| ||||||||||||||||||||    
T  24436804 aaatacaggggaaaattgagaaatttttcatgttttttggaagagaatttttttagagagtgataaattaatgtttttgattaatatatttttaatt 24436900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 34738524 - 34738428
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||  |||| ||||||| |||||| |||| ||||||||  |||||||  ||||||||||  |||||||||||||||||||||||    
T  34738524 aaatataggggaaaatcaagaattctttcaaatttttagaaaaagtattttgttagagaattataaattaatagttatgattaatatatttttaatt 34738428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 325
Target Start/End: Complemental strand, 50084391 - 50084244
Alignment:
Q  180 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaaga 278  Q
    |||||||||||| | ||||||||| ||||| ||||| || || |||| ||||  | |||||||||  |||||| |||||| |||||||||||||||||||    
T  50084391 ttaggctttgttcgagagtttggagggaagaggaagaaa-gattttgtgggaagagaaatataggaaaaaattgagaaatttttcacattttttgaaaga 50084293  T
Q  279 gtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    || ||||  || |||   ||||||||||||||||||||| |||||||||    
T  50084292 gtgttttcttaaagagtgataaattaatgtttatgattattatattttt 50084244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 17416611 - 17416686
Alignment:
Q  256 aatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||| ||||||| |||| ||||||   |||||||||||||||||||||||||||||||||||    
T  17416611 aatctttcacagtttttgtaagagtaattttttagagattgataaattaatgtttatgattaatatatttttaatt 17416686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 45752073 - 45752165
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttga 274  Q
    |||||||||||| ||||||||| || ||| ||||||| |  || |||||||| ||||||||  ||||||| ||||||||||||||||||||||    
T  45752073 aggctttgtttgagagtttggaggggaggagaaggaagggtttcgggggacaaaaatatagaagaaaattgagaaatctttcacattttttga 45752165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 1278660 - 1278582
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||||| |||||||| |||| | |||||  ||||||||||| |||||||||||||||||||||||    
T  1278660 agaaatctatcacattttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaatt 1278582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 51303065 - 51303139
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||||||||||| ||||||| | ||| |||||||  ||||||||||| |||||||||||||||||||    
T  51303065 agaaatctttcacattttttcaaagagtgtatttttagagaatgataaattaatgcttatgattaatatattttt 51303139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 329
Target Start/End: Original strand, 35619330 - 35619482
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    ||||||| ||||||||| |||||||| ||  | |||| | | || ||||| ||| | ||||||||| ||||||| | |||||||||| ||||||| |||     
T  35619330 acttaggttttgtttggaagtttggagggg-gaggaatgtaagattttggaggagagaaatataggagaaaattgaaaaatctttcatatttttttaaat 35619428  T
Q  278 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||   |||||   |||||||||||||||||||||||||| ||||||||    
T  35619429 agtattttatgagagagtgataaattaatgtttatgattaatatacttttaatt 35619482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 40136131 - 40136192
Alignment:
Q  270 tttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  40136131 tttgagagagtatttttgtagagaatgataaattaatgtttatgattaatagatttttaatt 40136192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 30543255 - 30543331
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||||||||| || |||| |||||||  ||||||||||  |||||||||||||||||||||||    
T  30543255 aaatcttttacattttttgaaagaataattttttagagaatgataaattaatacttatgattaatatatttttaatt 30543331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 36325924 - 36325828
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| || |||||||  |||||||||||| ||||||||||||||| ||||| ||||||  ||| ||| | ||||||||||||||||| ||||||||    
T  36325924 aaatacagaggaaaatggagaaatctttcagattttttgaaagagtgtttttctagagaacaatgaataattgtttatgattaatataattttaatt 36325828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 12625698 - 12625791
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcaca-ttttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| ||||||||| ||||||| |||||| |||||| ||||| ||||||| |||||  ||||||  |||||||||||||||||||||| ||||    
T  12625698 aaatatatgggaaaattaagaaatccttcacatttttttaaaagaatatttttttagagtgataaat--atgtttatgattaatatattttaaatt 12625791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 36385543 - 36385452
Alignment:
Q  239 ataggggaaaattcagaaatctttcacattttttgaaagagtatt-tttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| |||||| |||||||||||||||||||||||| ||| || |||  ||||  ||||||||||  |||||||||||| ||||||||||    
T  36385543 atagggaaaaattgagaaatctttcacattttttgaaatagttttatttaaagagtgataaattaatacttatgattaatacatttttaatt 36385452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 50587295 - 50587146
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    ||||||||||||||||||||||||| |||||||||   | |||||  |||    ||||| ||||||||||  ||||||||| |||||||||| |||||||    
T  50587295 aggctttgtttgggagtttggaagggaggggaagggggg-ctttgaagggtgggaaatagaggggaaaatggagaaatcttacacattttttaaaagagt 50587197  T
Q  281 atttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||  ||||||   |||||||||||  ||||||||||| | ||||||||    
T  50587196 attttgttagagattgataaattaatggctatgattaatacacttttaatt 50587146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 19258935 - 19258997
Alignment:
Q  224 ttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattttt 286  Q
    |||||||| | ||||||||| | ||||| |||||||||||||||||||||||||| |||||||    
T  19258935 ttgggggagagaaatataggaggaaattgagaaatctttcacattttttgaaagaatattttt 19258997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 33579439 - 33579366
Alignment:
Q  258 tctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| ||| |||||||||||||| |||| |||||||  ||||||||||| |||||| ||||||||||||||||    
T  33579439 tcttttacaatttttgaaagagtaattttttagagaatgataaattaatgcttatgactaatatatttttaatt 33579366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 32123664 - 32123575
Alignment:
Q  240 taggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||  ||||||||||||| |||||||||  ||| |||||||| ||||  |||||| ||||||||| ||||||||||| ||||||    
T  32123664 taggggaaaatagagaaatctttcacgttttttgaa--agtgtttttgtaaagaatgataaatgaatgtttatcattaatatattgttaatt 32123575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 9861203 - 9861285
Alignment:
Q  248 aattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| |||||||||||||| ||||||||| ||||||||| ||||||   |||||||||  ||||||||| ||||||||||||||    
T  9861203 aattgagaaatctttcacagtttttgaaaaagtatttttctagagagtgataaattaagatttatgatt-atatatttttaatt 9861285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 28848677 - 28848767
Alignment:
Q  241 aggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||   |||||||||||| ||||| |||||||  |||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  28848677 aggggaaaattgtaaaatctttcacaattttttaaagagtcattttttagagaatgataaattaatgcctatgattactatatttttaatt 28848767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 38958079 - 38958153
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||| ||||||||||||||||||||||||||||| |  | ||  |||||||| || |||||||||||||||||||    
T  38958079 agaagtctttcacattttttgaaagagtattttttttaaaaatgataaattactgcttatgattaatatattttt 38958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 13044468 - 13044510
Alignment:
Q  244 ggaaaattcagaaatctttcacattttttgaaagagtattttt 286  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  13044468 ggaaaattaagaaatctttcacattttttaaaagagtattttt 13044510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 26345809 - 26345744
Alignment:
Q  260 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattt 323  Q
    |||||||||||| ||| ||||| |||| |||||||  ||||||||||| |||||||||||||||||    
T  26345809 tttcacatttttcgaatgagtaattttttagagaatgataaattaatgcttatgattaatatattt 26345744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 34551971 - 34552052
Alignment:
Q  246 aaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatattttt 325  Q
    |||||| | |||||||||| |||||||||||  |||||||| ||||||   |||||| |||| |||||||||||||||||||    
T  34551971 aaaattgacaaatctttcatattttttgaaaaggtatttttctagagagtgataaatcaatgcttatgattaatatattttt 34552052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 35604172 - 35604232
Alignment:
Q  266 attttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||| ||||||||||| |||||||  ||||||||| |||||||||||||||||||||    
T  35604172 attttttgatagagtattttt-tagagaataataaattaacgtttatgattaatatattttt 35604232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 329
Target Start/End: Original strand, 28217478 - 28217511
Alignment:
Q  296 taaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||||||||||||    
T  28217478 taaattaatgtttatgattaatatatttttaatt 28217511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 34141675 - 34141643
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaa 327  Q
    |||||||||||||||||||||||||||||||||    
T  34141675 ataaattaatgtttatgattaatatatttttaa 34141643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 36269950 - 36269860
Alignment:
Q  236 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||||||  ||| | | |||||||||| | ||||||||||||| |||||||  ||||||||||| |||||||| |||| |||||    
T  36269950 aatataggggaaaatggagagacccttcacattttctaaaagagtattttt-tagagaatgataaattaatgcttatgattgatatgttttt 36269860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 50598867 - 50598923
Alignment:
Q  238 tataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa 294  Q
    ||||||| |||||  ||||||||||||| ||||||| |||||||||||| |||||||    
T  50598867 tatagggaaaaatagagaaatctttcactttttttggaagagtatttttttagagaa 50598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 718466 - 718532
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatat 319  Q
    ||||||||||||||||| ||||||||  |||| || ||||  ||||||||||| |||||||||||||    
T  718466 aaatctttcacatttttcgaaagagtgattttttaaagaatgataaattaatgcttatgattaatat 718532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 42161951 - 42162021
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||  | |||| |||||||  ||||| |||| ||||||||||||||| ||||||||    
T  42161951 ttcacattttttgaaagaacagttttttagagaatgataaactaatatttatgattaatatacttttaatt 42162021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 47742810 - 47742695
Alignment:
Q  180 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcaca-ttttttgaaaga 278  Q
    |||||||||||||||||||||||| ||  |||||||  | ||||| |||||  | |||||||| |||||||  |||||  ||||| | ||||||||| ||    
T  47742810 ttaggctttgtttgggagtttggaggggtggggaagcgaggacttcgggggtaagaaatatagaggaaaatgaagaaaattttcatatttttttgaagga 47742711  T
Q  279 gtatttttgtagagaa 294  Q
    |||||| | |||||||    
T  47742710 gtatttgtttagagaa 47742695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 50476719 - 50476641
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||||| | ||||  ||| ||  ||||| ||||| |||| ||| ||||||||||||||    
T  50476719 agaaatctttcacattttttgaaagagcaatttttaagataatgataaactaatgcttattattgatatatttttaatt 50476641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 50915851 - 50915913
Alignment:
Q  269 ttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||| || ||||||||||  ||||||| |||| ||||||||| ||||||||||||    
T  50915851 ttttgaaagagtgttattgtagagaatgataaattcatgtgtatgattaaaatatttttaatt 50915913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 1278344 - 1278382
Alignment:
Q  175 gcgacttaggctttgtttgggagtttggaaggaagggga 213  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  1278344 gcgacttaggctttgtttgggagtttggaggggagggga 1278382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 325
Target Start/End: Complemental strand, 33643782 - 33643752
Alignment:
Q  295 ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||||||||||||||||||||||    
T  33643782 ataaattaatgtttatgattaatatattttt 33643752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 328
Target Start/End: Original strand, 36269308 - 36269393
Alignment:
Q  245 gaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    ||||||| ||||| ||||||| |||| ||| ||||   ||||||||||||  | |||| |||| ||||||||||||||||||||||    
T  36269308 gaaaattgagaaacctttcaccttttctgagagagggattttgtagagaatgaaaaatgaatgcttatgattaatatatttttaat 36269393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 69992 - 69868
Alignment:
Q  184 gctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtat 282  Q
    |||||||||| || |||||| || || |||||||| || |||| ||||  | ||||||  ||||||||  ||||||||||||  |||||| ||||||||     
T  69992 gctttgtttgtgaatttggaggggagaggaaggaaagattttgaggggtgaaaaatatgagggaaaatgaagaaatctttcaatttttttaaaagagtag 69893  T
Q  283 ttttgtagagaa--ataaattaatg 305  Q
    |||| |||||||  |||||||||||    
T  69892 ttttttagagaatgataaattaatg 69868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 5970318 - 5970408
Alignment:
Q  244 ggaaaattcagaaatctttcacatttttt--gaaagagtatttttgt--agagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    |||||||  ||||||||||||||||||||  |||||||| ||||| |  ||||||  ||||| |||||||||||||| |||| ||||||||    
T  5970318 ggaaaatagagaaatctttcacattttttttgaaagagtgtttttttttagagaatgataaactaatgtttatgattgatatgtttttaat 5970408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 34749907 - 34749983
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||||  |||| |||||||  |||||||||   || ||||| || |||||||||||    
T  34749907 aaatctttcacattttttgaaagagtgattttttagagaatgataaattaaaacttttgattgatttatttttaatt 34749983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 39125262 - 39125295
Alignment:
Q  180 ttaggctttgtttgggagtttggaaggaagggga 213  Q
    |||||||||||||||||||||||| |||||||||    
T  39125262 ttaggctttgtttgggagtttggagggaagggga 39125295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 2175518 - 2175447
Alignment:
Q  261 ttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||  | ||||| |||||||  ||||| |||| ||||||||||||||| ||||||||    
T  2175518 ttcacattttttgaaagaacaatttttttagagaatgataaactaatatttatgattaatatacttttaatt 2175447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 7915689 - 7915637
Alignment:
Q  270 tttgaaagagtatttttgt-agagaaataaattaatgtttatgattaatatat 321  Q
    ||||||||||||||||| | ||||  ||||||||||| |||||||||||||||    
T  7915689 tttgaaagagtattttttttagagtgataaattaatgcttatgattaatatat 7915637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 39125315 - 39125392
Alignment:
Q  236 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgat 313  Q
    ||||||||| ||||||  ||||||| ||| ||||||| ||||||||||||| |||||||   ||||||||||||||||||    
T  39125315 aatatagggaaaaattg-gaaatctatcaaatttttttaaagagtattttt-tagagaatgttaaattaatgtttatgat 39125392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 51246475 - 51246542
Alignment:
Q  264 acattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||  | |||| |||||||  ||||| |||| ||||||||||||||| ||||||||    
T  51246475 acattttttgaaagaacagttttttagagaatgataaactaatctttatgattaatatacttttaatt 51246542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 178 - 329
Target Start/End: Complemental strand, 53888753 - 53888600
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaaa 276  Q
    |||||||||||||||||||||||||| || ||||||||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  53888753 acttaggctttgtttgggagtttggaggggaggggaaggaaaggctttgggtggacaaaaatataggggaaaattgagaaatctttcacattttttgaaa 53888654  T
Q  277 gagt-atttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    | ||  ||||| |||||  |||| |||||| ||||| |||||||||||||||||    
T  53888653 gtgtgttttttttagagggataagttaatgcttatggttaatatatttttaatt 53888600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 3334128 - 3333988
Alignment:
Q  180 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttg--ggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||  ||||| | |||||||| |||||||| ||||||||||||||||||||| |||    
T  3334128 ttaggttttgtttgggagtttggaagga-ggggaatgaatgactttgaaggggaaa-aaatatagaggaaaattgagaaatctttcacattttttggaag 3334031  T
Q  278 agtatttttgtagagaa--ataaattaatgtttatgattaata 318  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  3334030 agtatttttttagagaatgataaattaatgtttatgattaata 3333988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 178 - 329
Target Start/End: Complemental strand, 35283354 - 35283200
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatg-actttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaa 276  Q
    |||||||||||||||||||||||||| || ||||||||||| | | ||||||||| | || |||||| ||||||| ||||||||||||||||||||||||    
T  35283354 acttaggctttgtttgggagtttggaggggaggggaaggaaaggattttgggggagagaagtataggagaaaattgagaaatctttcacattttttgaaa 35283255  T
Q  277 gagtat--ttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||  |||| |||||  ||||||||||  |||||| ||||||||||||||||    
T  35283254 gagtatttttttttagagtgataaattaattcttatgactaatatatttttaatt 35283200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 32720908 - 32721050
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagta 281  Q
    |||||||||||| ||||||||| || |||||||||       |||||||| | |||||||| ||||||||  |||||||||||||||| |||||||||||    
T  32720908 aggctttgtttgagagtttggaggggaggggaagg-------ttgggggatagaaatatagaggaaaattgtgaaatctttcacatttattgaaagagta 32721000  T
Q  282 tttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||   ||||||||||| |||||||||||||||||||||||    
T  32721001 tttttgtagagagtgataaattaatgcttatgattaatatatttttaatt 32721050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 54089666 - 54089768
Alignment:
Q  185 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggg-gacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatt 283  Q
    ||||||||||||||||||||||||||||||||||   |||||||| || | ||||||| | ||||||| |||||||||||||||||||||||| ||||||    
T  54089666 ctttgtttgggagtttggaaggaaggggaaggaagcgctttggggtgagagaaatatacgagaaaattgagaaatctttcacattttttgaaatagtatt 54089765  T
Q  284 ttt 286  Q
    |||    
T  54089766 ttt 54089768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 329
Target Start/End: Complemental strand, 46891645 - 46891499
Alignment:
Q  186 tttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 284  Q
    ||||||||| |||||| | || |||||||||||  || | | ||||| | ||||| ||||||||||| |||||||||||| ||||||||||||| |||||    
T  46891645 tttgtttggaagtttgaaggggaggggaaggaaaaacatcgaggggagagaaatacaggggaaaattgagaaatctttcatattttttgaaagattattt 46891546  T
Q  285 ttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    || ||||||   ||||||||||  |||||||||||||||||||||||    
T  46891545 ttttagagactgataaattaatacttatgattaatatatttttaatt 46891499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 1132807 - 1132903
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||| |||| |||||||  ||||||||||||| ||| |||||||||||||||||    
T  1132807 aaatatagtggaaaattataaaatctttcacattttttgaaagagtaattttttagagaatgataaattaatgttcatggttaatatatttttaatt 1132903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 27682066 - 27681916
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggga-cataaatataggggaaaattcagaaatcttt-cacattttttgaaagag 279  Q
    ||||||||||||||||||| || || ||| ||||||| | ||||||  || |||||||||| ||||||||| | |||||||| || ||||||||||| |     
T  27682066 aggctttgtttgggagtttagatgggaggagaaggaaaggctttggaagaacataaatataagggaaaattgataaatcttttcatattttttgaaaaaa 27681967  T
Q  280 tatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| ||||||   ||||||||||| |||||||||||||||||||||||    
T  27681966 tattttt-tagagagtgataaattaatgcttatgattaatatatttttaatt 27681916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 2928050 - 2927957
Alignment:
Q  238 tataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||||| || ||    ||||| |||||||||||||||||||||||||||||    
T  2928050 tataggggaaaattgagaaatctttcacgttttttgaaagagaatttttttatagggtgataaactaatgtttatgattaatatatttttaatt 2927957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 30697578 - 30697484
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| ||||| | ||||  |||||||||||||||||| ||||||| |||||||  ||||| |||||||||||||||||||||||||||||    
T  30697578 aaatatagggggaaattgataaat--ttcacattttttgaaagattatttttttagagaatgataaactaatgtttatgattaatatatttttaatt 30697484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 319
Target Start/End: Complemental strand, 9773676 - 9773534
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg--ggacataaatataggggaaaattcagaaatctttcacat-tttttga 274  Q
    |||| ||| ||||||||| ||||||| ||||||||||||||  ||||||||  ||| | ||||||||||||||||| |||| | |||||||| |||||||    
T  9773676 acttgggcattgtttggg-gtttggagggaaggggaaggaaatactttgggagggagagaaatataggggaaaattgagaatt-tttcacatctttttga 9773579  T
Q  275 aagagtatttttgtagagaaataaattaatgtttatgattaatat 319  Q
    |||||| ||||| | |||  ||||||||||| |||||||||||||    
T  9773578 aagagtgtttttatggagtgataaattaatgcttatgattaatat 9773534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 329
Target Start/End: Complemental strand, 48444721 - 48444618
Alignment:
Q  227 ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 324  Q
    ||||||||||||||| || |||||| | || |||||||||||||||  |||||||||||| ||||||   |||||| |||||||||||||||||||||||    
T  48444721 ggggacataaatatatgg-aaaattgataattctttcacatttttttgaagagtatttttttagagagtgataaatcaatgtttatgattaatatatttt 48444623  T
Q  325 taatt 329  Q
    |||||    
T  48444622 taatt 48444618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 36638031 - 36637913
Alignment:
Q  213 aaggaatgactttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgttta 309  Q
    |||||||| || |||| ||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||   ||||||| |||  ||    
T  36638031 aaggaatggctctgggaggagataaatataggggaaaattgagaaatctttcacattttttgaaaaagtatttatttagagagtgataaattgatgcata 36637932  T
Q  310 tgattaatatatttttaatt 329  Q
    |||||||||| |||||||||    
T  36637931 tgattaatat-tttttaatt 36637913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 329
Target Start/End: Complemental strand, 40674375 - 40674220
Alignment:
Q  177 gacttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaa 275  Q
    |||||||| |||||||| ||||||| | || | ||||||||| ||||||||| ||| | | ||||| || |||||| ||||| |||||||||||||||||    
T  40674375 gacttaggttttgtttgagagtttgtaggggatgggaaggaaagactttgggaggagagatatatatggaaaaattgagaaacctttcacattttttgaa 40674276  T
Q  276 agagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| |||||| |||||    |||||| |||  || ||||||||||||||||||||    
T  40674275 agagaatttttttagagtgtgataaatcaatacttgtgattaatatatttttaatt 40674220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 329
Target Start/End: Complemental strand, 3537473 - 3537319
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaa 276  Q
    |||||||||||||||||||||||||| || | |||| || | | ||||| ||||    ||||||  ||||||||  |||||||||||| ||||||| |||    
T  3537473 acttaggctttgtttgggagtttggaggggaagggaggggaaggctttgaggggtggaaaatatgagggaaaatgaagaaatctttcaaattttttaaaa 3537374  T
Q  277 gagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| |||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  3537373 gagtagttttttagagaatgataaattaatgcatatgattactatatttttaatt 3537319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 9768424 - 9768300
Alignment:
Q  197 gtttggaaggaaggggaaggaatgactttggg--ggacataaatataggggaaaattcagaaatctttcacat-tttttgaaagagtatttttgtagaga 293  Q
    ||||||| || |||||||| || |||||||||  ||| | ||||||||||||||||| |||| | |||||||| ||||||||||||| ||||| |||||     
T  9768424 gtttggaggggaggggaagcaaagactttgggaaggagagaaatataggggaaaattgagaatt-tttcacatctttttgaaagagtgtttttttagagt 9768326  T
Q  294 aataaattaatgtttatgattaatat 319  Q
     ||||||||||| |||||||||||||    
T  9768325 gataaattaatgcttatgattaatat 9768300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 50201777 - 50201692
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaata 318  Q
    |||||||||| |||||| | |||||||||||| ||||||||||||||||||| |||||||   |||||||||| ||||||||||||    
T  50201777 aaatatagggaaaaattgaaaaatctttcacaatttttgaaagagtatttttttagagaatggtaaattaatgcttatgattaata 50201692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 4247306 - 4247230
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| ||||||| |||||||| |||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  4247306 aaatctttcatatttttttaaagagtaattttttagagaatgataaattaatgcttatgattaatatatttttaatt 4247230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 32859038 - 32858943
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||    ||||||||||||||||||||||||||| |||| |||||||  ||||||||||  ||| |||||||||||||||||||    
T  32859038 aaatataggggaaaatggtaaaatctttcacattttttgaaagagtaatttt-tagagaatgataaattaatacttacgattaatatatttttaatt 32858943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 18257600 - 18257675
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    |||||||||||||||||| |||| |||| ||| |||||||  ||||| |||||||||||||| |||||||||||||    
T  18257600 aaatctttcacattttttaaaagggtatatttttagagaatgataaactaatgtttatgattcatatatttttaat 18257675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 40118717 - 40118809
Alignment:
Q  180 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacatttttt 272  Q
    |||||||||||||| ||||||||| || ||||||||||| | |||||||||  | |||||| | || ||||  ||||||||||||||||||||    
T  40118717 ttaggctttgtttgagagtttggagggtaggggaaggaagggctttgggggtgagaaatatcgagggaaatggagaaatctttcacatttttt 40118809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 329
Target Start/End: Original strand, 50345483 - 50345578
Alignment:
Q  237 atataggggaaaattcagaaatctttcacattttttgaaagagtatt-tttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||| |||||||| | | ||||||| |||||||||| ||| ||||||   |||||||||||||| ||||| ||||||||||||||    
T  50345483 atataggggaaaattgagaaatctcttatattttttaaaagagtattatttttagagagtgataaattaatgtttgtgattgatatatttttaatt 50345578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 328
Target Start/End: Complemental strand, 29623497 - 29623350
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttt-tgaaagagt 280  Q
    |||||||||||||||||||||| ||||| |||||| | | |||| ||||  | ||  |||| |||||| | |||||| |||||||||||| | |||||||    
T  29623497 aggctttgtttgggagtttggagggaagaggaagggagggctttaggggtgagaa--atagaggaaaaatgagaaatttttcacatttttctcaaagagt 29623400  T
Q  281 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    | |||| |||| ||  ||||| ||||| |||||||| |||||||||||||    
T  29623399 aattttttagaaaatgataaactaatgcttatgattcatatatttttaat 29623350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 13638616 - 13638539
Alignment:
Q  255 aaatctttcaca-ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||| |||||| ||||||||  ||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  13638616 aaatctttcacaattttttaaaagagtacatttttagagaatgataaattaatgcttatgattaatatatttttaatt 13638539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 31651348 - 31651413
Alignment:
Q  266 attttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||| |||| |||||||   |||||||||| |||||||||||||||||||||||    
T  31651348 attttttgaaagagtaattttttagagaatgttaaattaatgcttatgattaatatatttttaatt 31651413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 54748525 - 54748424
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtattt-----ttgtagagaa--ataaattaatgtttatgattaatatatttttaa 327  Q
    |||||||||| | |||| ||| |||||||||||| |||||||||||||||     || ||||||   ||||||||||| |||||||||||||||||||||    
T  54748525 aaatatagggaataattgagagatctttcacattctttgaaagagtatttaatttttttagagagtgataaattaatgcttatgattaatatatttttaa 54748426  T
Q  328 tt 329  Q
    ||    
T  54748425 tt 54748424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 517512 - 517600
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| |||||||||||| | ||||| |||||||| |||| |||||||  |||||||||||  | |||||| |||||||||||||    
T  517512 gggaaaattgagaaatctttcaaaatttttaaaagagtagttttttagagaatgataaattaatgcatttgattactatatttttaatt 517600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 3457470 - 3457564
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgt----agagaaataaattaatgtttatgattaatatattttt 325  Q
    |||||||||| |||||| |||||||||||||||||||||||| | ||| ||| |    ||||   |||||||||||||||||||||||| |||||    
T  3457470 aaatatagggaaaaattaagaaatctttcacattttttgaaaaattatatttattttaagagtggtaaattaatgtttatgattaatattttttt 3457564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 329
Target Start/End: Original strand, 5939598 - 5939749
Alignment:
Q  181 taggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagag 279  Q
    ||||||||||||||||||||||| || | || |||||| | ||||| ||||    ||||||| || || ||  |||||||||||| ||||||| ||||||    
T  5939598 taggctttgtttgggagtttggaggggaaggaaaggaaaggctttgaggggtgcaaaatataaggaaatatagagaaatctttcaaattttttaaaagag 5939697  T
Q  280 tatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    || |||| |||||||  |||| ||||||  |||||||| | |||||||||||    
T  5939698 tagttttttagagaatgataatttaatgcatatgattactttatttttaatt 5939749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 49304391 - 49304321
Alignment:
Q  260 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||  | ||||| || ||||  |||||||||||||||||||||||||||||||||||    
T  49304391 tttcacattttttgaaagctttttttt-taaagaatgataaattaatgtttatgattaatatatttttaatt 49304321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 53620429 - 53620359
Alignment:
Q  236 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaat 304  Q
    ||||||||  ||| || ||||||||| |||||||||||||||||||||||| |||||||  ||||||||||    
T  53620429 aatataggaaaaatttgagaaatcttacacattttttgaaagagtatttttttagagaatgataaattaat 53620359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 54089346 - 54089423
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaaat---aaattaatgtttatgattaatatatttttaatt 329  Q
    |||| ||||| |||||||||||||||| |||| || | ||||   ||||||||||| |||||||||||||||||||||    
T  54089346 aaatgtttcaaattttttgaaagagtaattttttaaaaaaatgataaattaatgttaatgattaatatatttttaatt 54089423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 329
Target Start/End: Original strand, 38401802 - 38401887
Alignment:
Q  246 aaaattcagaaatctttcacattttttgaaagagtatttttgt--agagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| | |||||||||||||||||| ||||||| ||||| |  ||||  ||||| |||||||||| ||||||||||||| ||||    
T  38401802 aaaatttaaaaatctttcacattttttaaaagagtgtttttttaaagagtgataaactaatgtttataattaatatattttaaatt 38401887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 15499191 - 15499267
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||| ||||  ||| |||||||  ||||| ||||  |||||||||||||||||| ||||    
T  15499191 aaatctttcacattttttgaaatagtaaatttttagagaatgataaaataatacttatgattaatatattttaaatt 15499267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 30996285 - 30996189
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgta--gagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||| ||||||| |||||||||||   ||| || | |||| ||  |||  ||||||||||||||||||||| |||||||||||||    
T  30996285 aaatatagaggaaaatacagaaatgtttcacattttccaaaaaagaaattttttaaggagtgataaattaatgtttatgattactatatttttaatt 30996189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 34729218 - 34729305
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||  |||||| ||||||||||||| ||||||||  |||  ||||||  |||||||||| |||||||||| |||||||||||||    
T  34729218 gggaaaatggagaaatttttcacatttttt-aaagagtaaattttaagagaatgataaattaatatttatgattactatatttttaatt 34729305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 42134582 - 42134658
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||  |||||| | |||| |||||||   |||| |||||||||||||||||||||||||||||    
T  42134582 aaatctttaacatttttcaaaagagcaattttttagagaatgctaaactaatgtttatgattaatatatttttaatt 42134658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 51686707 - 51686623
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||  |||||||||| | |||||||||||| ||| |||| |||||||  |||||||||||  |||||||| |||||||||    
T  51686707 gggaaaatgaagaaatcttttaaattttttgaaagtgtacttttttagagaatgataaattaatgcatatgattactatattttt 51686623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 42157707 - 42157786
Alignment:
Q  253 agaaatctttcacatttttt-gaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| ||||||||||||| ||||||||  ||||| ||||||  |||||| ||||||||| ||| ||||||||||||||    
T  42157707 agaaatatttcacatttttttgaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaatt 42157786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 294
Target Start/End: Complemental strand, 42261681 - 42261609
Alignment:
Q  222 ctttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa 294  Q
    |||||||||  | |||||||||| |||||  | || |||| ||||||||||||| ||||||||||||||||||    
T  42261681 ctttgggggtgagaaatatagggaaaaatagaaaagtcttccacattttttgaaggagtatttttgtagagaa 42261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 325
Target Start/End: Complemental strand, 7965164 - 7965133
Alignment:
Q  294 aataaattaatgtttatgattaatatattttt 325  Q
    ||||||||||||||||||||||||||||||||    
T  7965164 aataaattaatgtttatgattaatatattttt 7965133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 11500281 - 11500219
Alignment:
Q  266 attttttgaaagagt-atttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||||||| | |||||| |||||||  |||||||||||||||| ||||||||||||||    
T  11500281 attttttgaaagaatgatttttttagagaatgataaattaatgtttataattaatatattttt 11500219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 17642772 - 17642702
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||| ||||| || |||| |||||||  ||||| |||| ||||||||||||||| ||||||||    
T  17642772 ttcacatttttttaaagaatagttttttagagaatgataaactaatatttatgattaatatacttttaatt 17642702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 329
Target Start/End: Original strand, 33281540 - 33281683
Alignment:
Q  181 taggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagag 279  Q
    ||||||||||||||||||| ||| || | || |||| | |||||||| |||    ||||||||||||||||    |||  ||||||||||||||||||||    
T  33281540 taggctttgtttgggagttaggaggggatggaaagggaagactttggagggttgaaaatataggggaaaatggtaaaaaatttcacattttttgaaagag 33281639  T
Q  280 tatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||        |||||  |||| ||||||||||||||||||||||||||||||    
T  33281640 ta--------gagaatgataagttaatgtttatgattaatatatttttaatt 33281683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 46017098 - 46017145
Alignment:
Q  180 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg 227  Q
    |||||||||||||||||||||||| ||||||||| |||| || |||||    
T  46017098 ttaggctttgtttgggagtttggagggaaggggagggaaggattttgg 46017145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 19148314 - 19148280
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||||||||||||||||    
T  19148314 ataaattaatgcttatgattaatatatttttaatt 19148280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 23568252 - 23568179
Alignment:
Q  255 aaatctttcacattttttgaaagagta--tttttgtagagaaataaattaatgtttatgattaatatattttta 326  Q
    ||||||||| |||||||||||||| ||  ||||| ||||   ||||||||||| |||||||||||||| |||||    
T  23568252 aaatctttcgcattttttgaaagaataactttttttagaatgataaattaatgattatgattaatatactttta 23568179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 54126469 - 54126377
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||||||| ||  |||||||||||| |   ||||||||| | ||||| || ||||  ||||||||||| |||||| ||||||||||||    
T  54126469 aaatataggggaacatggagaaatctttcaaaaaatttgaaagaatgtttttttaaagaatgataaattaatgattatgaataatatattttt 54126377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 30131787 - 30131854
Alignment:
Q  264 acattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||| | |||| |||||||  ||||| ||||  |||||||||||||| ||||||||    
T  30131787 acattttttgaaagagcagttttttagagaatgataaactaatacttatgattaatatacttttaatt 30131854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 32708913 - 32708838
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| |||||||||||| |||| |||||||||  |||   |||||||||||||||||||  || |||||||||||    
T  32708913 agaaatttttcacattttt-gaaaaagtatttttagagaatgataaattaatgtttatgatagatgtatttttaatt 32708838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 33944454 - 33944494
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaa 218  Q
    |||||||||||||||||||||||||| |||| || ||||||    
T  33944454 acttaggctttgtttgggagtttggagggaaaggaaaggaa 33944494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 15803435 - 15803297
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||||||||||||| || ||||||||||| | ||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||||||    
T  15803435 aggctttgtttgggagtttggaggggaggggaaggaaaggctttggggggagagaaatataggggaaaattgagaaatctttcacattttttgaaagagt 15803336  T
Q  281 atttttgtagaga--aataaattaatgtttatgattaat 317  Q
    |||||| ||||||   ||||||||||| |||||||||||    
T  15803335 atttttttagagagtgataaattaatgcttatgattaat 15803297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 329
Target Start/End: Original strand, 11522026 - 11522148
Alignment:
Q  208 aggggaaggaatgacttt-gggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaataaattaatgt 306  Q
    ||||||||||| | |||| |||||| | |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  11522026 aggggaaggaaaggctttagggggatagaaatatagggaaaaattgagaaatctttcacattttttgaaagagtatttttttagagtgataaattaatgt 11522125  T
Q  307 ttatgattaatatatttttaatt 329  Q
    ||| |||||||||||||||||||    
T  11522126 ttaagattaatatatttttaatt 11522148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 31584582 - 31584727
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    |||||| |||||||| ||||||||| || |||||||| || ||||||| ||||| | |||||||| | |||||| |||||||||||| ||||||||||||    
T  31584582 cttaggttttgtttgagagtttggaggggaggggaagaaaagactttgaggggagagaaatatagagaaaaattgagaaatctttcagattttttgaaag 31584681  T
Q  278 agtatttttgtagaga--aataaattaatgtttatgattaatatat 321  Q
      ||||||| ||||||   ||||||||||| |||||||||||||||    
T  31584682 gatatttttttagagacggataaattaatgcttatgattaatatat 31584727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 36031002 - 36030906
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| |||| |||||  ||||||||||||||||||| |||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  36031002 aaatacagggaaaaatggagaaatctttcacatttttggaaagagtatttttttagagaatgataaattaatgcttatgattaatatatttttaatt 36030906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 12941669 - 12941765
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||| ||||||||||| | |||||||  |||||   ||||||||| ||||||| |||||||||||||||||    
T  12941669 aaatataggggaaaattcagaaatctttcaaattttttgaaaaaatattttttcagagagtgataaattaacgtttatggttaatatatttttaatt 12941765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 30523466 - 30523390
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||||| |||| || ||||  ||||||||||  |||||||||||||||||||||||    
T  30523466 aaatctttcacattttttgaaagagtagttttttaaagaatgataaattaatacttatgattaatatatttttaatt 30523390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 16625677 - 16625771
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    |||||||| || ||||  |||||||||||||||||||||||||||||||||| |||||||  |||||  |||| |||||||| |||||||||||||    
T  16625677 aaatatagagggaaatggagaaatctttcacattttttgaaagagtattttt-tagagaatgataaaccaatgcttatgattcatatatttttaat 16625771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 27987931 - 27987793
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    |||||| |||||||| ||||||||| || |||| ||||||   |||||| |||| | |||| |||| ||||| | ||||||||||||||||| |||||||    
T  27987931 cttaggttttgtttgagagtttggaggggaggg-aaggaagagctttggagggatagaaatgtaggagaaaagtgagaaatctttcacatttgttgaaag 27987833  T
Q  278 agtatttttgtagaga--aataaattaatgtttatgatta 315  Q
    ||| ||||||||||||   ||||||||||| |||||||||    
T  27987832 agtgtttttgtagagagtgataaattaatgcttatgatta 27987793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 28074464 - 28074326
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    |||||| |||||||| ||||||||| || |||| ||||||   |||||| |||| | |||| |||| ||||| | ||||||||||||||||| |||||||    
T  28074464 cttaggttttgtttgagagtttggaggggaggg-aaggaagagctttggagggatagaaatgtaggagaaaagtgagaaatctttcacatttgttgaaag 28074366  T
Q  278 agtatttttgtagaga--aataaattaatgtttatgatta 315  Q
    ||| ||||||||||||   ||||||||||| |||||||||    
T  28074365 agtgtttttgtagagagtgataaattaatgcttatgatta 28074326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 30265251 - 30265325
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaa 327  Q
    |||||||| | |||||||||||||||| |||| |||||||  ||||||||||| |||||||||||||||||||||    
T  30265251 aaatcttttatattttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaa 30265325  T

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Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 329
Target Start/End: Complemental strand, 36870499 - 36870356
Alignment:
Q  184 gctttgtttgggagtttggaaggaagg-ggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagagta 281  Q
    ||||| |||||||||||||| || ||| |||||||| | ||||||||| | | ||||||||||||||||| |||||| ||||||| ||||||||||  |     
T  36870499 gctttatttgggagtttggaggggaggaggaaggaaaggctttggggggagaaaaatataggggaaaattgagaaatttttcacaatttttgaaagtatt 36870400  T
Q  282 tttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||  ||||  ||||||||||||     ||||||||||||||||||    
T  36870399 tttttagagagtgataaattaatgta----attaatatatttttaatt 36870356  T

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Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 4666323 - 4666248
Alignment:
Q  256 aatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| ||||||||||||||||||||  ||||||   ||||||||||| |||||||||||||||||| ||||    
T  4666323 aatctttcatattttttgaaagagtattttattagagagtgataaattaatgcttatgattaatatattttaaatt 4666248  T

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Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 5322000 - 5322095
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgt-agagaaa--taaattaatgtttatgattaatatatttttaa 327  Q
    ||||||||||||||||   |||||||||||||||||| |||||||||||||| | ||||||   || ||||||| |||||||| ||||||||||||    
T  5322000 aaatataggggaaaatggtgaaatctttcacatttttagaaagagtattttttttagagaatgctatattaatgcttatgattgatatatttttaa 5322095  T

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Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 325
Target Start/End: Original strand, 16465032 - 16465123
Alignment:
Q  237 atataggggaaaattcagaaatctttcacattttttgaaagag-tatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||| |||||||  ||||||||||||||||||||||||||| | ||||| |||  ||  ||||||||||||||||||||| |||||||||    
T  16465032 atatagaggaaaatagagaaatctttcacattttttgaaagagttgtttttttagtaaatgataaattaatgtttatgattactatattttt 16465123  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 33206976 - 33206901
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgatt-aatatatttttaa 327  Q
    |||||||||||||||||||||||||| ||||| |||||||   |||||||||| |||||||| |||||||||||||    
T  33206976 aaatctttcacattttttgaaagagtgtttttttagagaatgttaaattaatgcttatgattaaatatatttttaa 33206901  T

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Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 32761176 - 32761254
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||  |||||||| |||||||  |||| || || ||||||||| ||||||||||||||    
T  32761176 agaaatctttcacattttttgaaaatgtatttttttagagaatgataattttatatttatgattgatatatttttaatt 32761254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 9087597 - 9087666
Alignment:
Q  262 tcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| ||| ||||||||| || |||   |||||||||||||||||||||||||||||||||||    
T  9087597 tcacattttttcaaaaagtatttttttaaagagtgataaattaatgtttatgattaatatatttttaatt 9087666  T

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Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 41503346 - 41503269
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttt-tgtagagaa--ataaattaatgtttatgattaatatatttttaa 327  Q
    |||||| ||| |||||||||||||||||| ||| | |||||||  ||||||||||| |||||||||||||||||||||    
T  41503346 agaaattttttacattttttgaaagagtagtttgtttagagaatgataaattaatgattatgattaatatatttttaa 41503269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 5002659 - 5002755
Alignment:
Q  236 aatataggggaaaattcagaaatctttcacattttttgaaagagta--tttttgtagagaaataaattaatg-tttatgattaatatatttttaatt 329  Q
    |||||||||||||||    |||||||| |||||||||||||||| |  |||||  ||||| ||||||||||| ||||||||| ||||||||||||||    
T  5002659 aatataggggaaaatagtaaaatcttttacattttttgaaagagaaattttttaaagagagataaattaatgttttatgattgatatatttttaatt 5002755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 26618497 - 26618569
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||||| ||||||| |||| |||| || ||||  |||||||||||||||||| ||||||||||||    
T  26618497 aaatctttcacattatttgaaacagtaattttataaagaatgataaattaatgtttatgactaatatattttt 26618569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 327
Target Start/End: Complemental strand, 32951066 - 32950991
Alignment:
Q  255 aaatctttcacattttttgaaagagtat-ttttgtagagaa--ataaattaatgtttatgattaatatatttttaa 327  Q
    ||||||||||||| |||| ||||||||  |||| |||||||  |||||||||| ||||||||||||||||||||||    
T  32951066 aaatctttcacatcttttaaaagagtaacttttttagagaatgataaattaatatttatgattaatatatttttaa 32950991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 38325316 - 38325218
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacatttttt-gaaagagta--tttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    |||||||| |||||||  | |||||||||||||||||| ||||||||   ||||| |||||||  ||||||||||| |||||||| |||||||||||||    
T  38325316 aaatatagaggaaaatggaaaaatctttcacatttttttgaaagagtgattttttttagagaatgataaattaatgattatgattcatatatttttaat 38325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 323
Target Start/End: Complemental strand, 39820049 - 39819958
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatattt 323  Q
    ||||||||||||||||    |||||||||||||||| |||| || || |||||| | ||||  |||||||||||||||||||||||||||||    
T  39820049 aaatataggggaaaatggtaaaatctttcacattttctgaacgactaatttttggatagaatgataaattaatgtttatgattaatatattt 39819958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 329
Target Start/End: Original strand, 1270533 - 1270671
Alignment:
Q  195 gagtttggaaggaaggggaaggaatgactttgggggacataaa-tataggggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagag 292  Q
    ||||||||| || ||| ||| ||| ||||||| |||| | ||| |||  |||| |||| |||||||||| | ||||||| |||||||| ||||| |||||    
T  1270533 gagtttggaggggaggagaatgaaagactttgagggatagaaaatatgagggagaattgagaaatcttttaaattttttaaaagagtagtttttttagag 1270632  T
Q  293 aa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||  |||||||||||  |||||||| |||||||||||||    
T  1270633 aatgataaattaatgcatatgattactatatttttaatt 1270671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 3254806 - 3254728
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||  ||||||| ||||| ||||||  ||||| |||||  | |||||||||||||||||||||    
T  3254806 agaaatctttcacatttttgtaaagagtgtttttttagagagtaataatttaattctaatgattaatatatttttaatt 3254728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 3022842 - 3022808
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||||||||    
T  3022842 ataaattaatgtttatgattaatatatttttaatt 3022808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 329
Target Start/End: Original strand, 13018293 - 13018446
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    ||||||||||||||||||||||||| || | || |||||| | ||||| ||||    ||||||  |  |||||  ||||||||||||  |||||| ||||    
T  13018293 cttaggctttgtttgggagtttggaggggaaggaaaggaaaggctttgaggggtgcaaaatatgtgaaaaaatagagaaatctttcaatttttttaaaag 13018392  T
Q  278 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| |||| |||||||  |||||||||||  |||||||| | |||||||||||    
T  13018393 agtagttttttagagaatgataaattaatgcatatgattactttatttttaatt 13018446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 14385269 - 14385193
Alignment:
Q  255 aaatctttcacattttttgaaa-gagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||| ||  |||||| |||||||  |||||||||||||||| |||| |||||||||||||    
T  14385269 aaatctttcacattttttgaaaagatgattttt-tagagaatgataaattaatgtttattattagtatatttttaatt 14385193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 29880954 - 29880877
Alignment:
Q  254 gaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||  |||||||||||| | |||| |||||||  |||||  |||| |||||||||||||||||||||||    
T  29880954 gaaatctttcactgtttttgaaagagcaattttttagagaatgataaacgaatgcttatgattaatatatttttaatt 29880877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 39913420 - 39913386
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||||||||    
T  39913420 ataaattaatgtttatgattaatatatttttaatt 39913386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 329
Target Start/End: Original strand, 42946658 - 42946692
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||||||||    
T  42946658 ataaattaatgtttatgattaatatatttttaatt 42946692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 324
Target Start/End: Complemental strand, 7367779 - 7367695
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttt 324  Q
    ||||||||  |||||||||||||||||||| ||||| || ||||| |||||||  |||||||||||| |||||||  ||||||||    
T  7367779 gggaaaatgaagaaatctttcacatttttttaaagaatagtttttttagagaatgataaattaatgtctatgattgttatatttt 7367695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 39670072 - 39670147
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||| ||||    ||| | |||||||  ||||||||||||||||||| |||||||||||||||    
T  39670072 agaaatctttcacattttttaaaagg---tttatttagagaatgataaattaatgtttatgatcaatatatttttaatt 39670147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 13767597 - 13767531
Alignment:
Q  265 cattttttgaaagagtatttttgt-agagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||| |||| | ||||||  |||||| ||||||||||||||||||||||||||||    
T  13767597 cattttttgaaagagtaattttattagagaatgataaat-aatgtttatgattaatatatttttaatt 13767531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 17514933 - 17514965
Alignment:
Q  297 aaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||||||    
T  17514933 aaattaatgtttatgattaatatatttttaatt 17514965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 26599128 - 26599219
Alignment:
Q  236 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||||||  |||||||||| | |   ||||||| ||||||||| |||||||  ||||| ||||  |||||||||||||||||||    
T  26599128 aatataggggaaaatggagaaatcttttaaaacatttgaaaaagtatttttctagagaatgataaaataatacttatgattaatatattttt 26599219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 44656647 - 44656718
Alignment:
Q  260 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||| |||| |||| |||| |||| |   |||||||||| ||||||||||||||||||||||||    
T  44656647 tttcacatttttcgaaaaagtaattttttagatagtgataaattaatttttatgattaatatatttttaatt 44656718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 16518979 - 16519056
Alignment:
Q  253 agaaatctttcacatttttt-gaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    |||||||||||||||||||| |||||||| ||||| | |||||  ||||| ||||| |||||||| |||||||||||||    
T  16518979 agaaatctttcacatttttttgaaagagtgttttt-tggagaatcataaactaatgcttatgattcatatatttttaat 16519056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 26427718 - 26427645
Alignment:
Q  260 tttcacattttttgaaagagtatttt--tgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| ||| ||||||||||||  | |||||||  ||| ||||||| |||||||||||||||||||||||    
T  26427718 tttcacattgtttaaaagagtattttattttagagaatgatatattaatgcttatgattaatatatttttaatt 26427645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 31083064 - 31083025
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaa 218  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  31083064 cttaggctttgtttgggagtttggaggggaggggaaggaa 31083025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 31550160 - 31550230
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||| || |||| |||||||  ||||| ||||  |||||||||||||| ||||||||    
T  31550160 ttcacattttttgaaagaatagttttttagagaatgataaactaatagttatgattaatatacttttaatt 31550230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 34757805 - 34757719
Alignment:
Q  245 gaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| |||||||||||| |  |||  |||||||| |||  |||||||  |||||||||||| |||||||| |||||||||||||    
T  34757805 gaaaattgagaaatctttcaaaaatttgaaaagagtaatttcttagagaatgataaattaatgtatatgattattatatttttaatt 34757719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Original strand, 9087399 - 9087433
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||||||||||||||||    
T  9087399 ataaattaatgcttatgattaatatatttttaatt 9087433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 10820729 - 10820660
Alignment:
Q  255 aaatctttcacattttttg-aaagagtatttttgtagagaa--ataaattaatgtttatgattaatatat 321  Q
    |||||||| |||||||||  |||||||| |||| |||||||  |||| ||||||||||||||||||||||    
T  10820729 aaatcttttacattttttttaaagagtaattttttagagaacgataagttaatgtttatgattaatatat 10820660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 39205218 - 39205130
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||  |||||||||||| |   ||| |||||||| |||| ||||||   |||||||||||| |||||||| |||||||||||||    
T  39205218 gggaaaatgtagaaatctttcaaaaaatttaaaagagtagttttttagagagtgataaattaatgtatatgattactatatttttaatt 39205130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 301 - 329
Target Start/End: Complemental strand, 1409006 - 1408978
Alignment:
Q  301 taatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||    
T  1409006 taatgtttatgattaatatatttttaatt 1408978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 4003592 - 4003521
Alignment:
Q  260 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| || |||||||| |||| |||||||  ||| || |||| ||||||||| |||||||||||||    
T  4003592 tttcacatttcttaaaagagtagttttttagagaaggatacatcaatgcttatgattactatatttttaatt 4003521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 6584724 - 6584787
Alignment:
Q  269 ttttgaaagagtat-ttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| ||||||||| |||| |||||||  |||||||||| ||||||||||||||||||| ||||    
T  6584724 ttttaaaagagtatattttctagagaatcataaattaatttttatgattaatatattttaaatt 6584787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 14008147 - 14008195
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg 230  Q
    |||||||||||||||||||||| || | |||| || |||||||||||||    
T  14008147 aggctttgtttgggagtttggaggggaagggaggggatgactttggggg 14008195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 38216438 - 38216485
Alignment:
Q  284 tttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||  ||| || ||||||||||||||||||||||||||||    
T  38216438 tttgtagagaatgatagatgaatgtttatgattaatatatttttaatt 38216485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 40422891 - 40423041
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagta 281  Q
    ||||||||||||||||||| ||||| | | |||| || | ||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  40422891 aggctttgtttgggagtttagaagggatgagaagaaaaggctttggggatcataaatatatgggaaaattgagaaatctttcacaatttttgaaagagta 40422990  T
Q  282 tttttgt---agagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| |   ||||  |||||||||| ||||||||||||||||||||||||    
T  40422991 ttttttttagagagtgataaattaatatttatgattaatatatttttaatt 40423041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 329
Target Start/End: Complemental strand, 28880229 - 28880104
Alignment:
Q  206 gaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaatta 302  Q
    |||||| |||||| ||||||| ||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||   ||||||||    
T  28880229 gaagggaaaggaa-gactttgaggggagagaaatataggggaaaattgagaaatcttttacattttttgaaagagtatttttttagagagtgataaatta 28880131  T
Q  303 atgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||    
T  28880130 atgtttatgattaatatatttttaatt 28880104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 180 - 321
Target Start/End: Original strand, 31418776 - 31418916
Alignment:
Q  180 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagag 279  Q
    |||||||||||||| ||||||||| || || |||||||||||||||| ||||   |||||||||  |||||| | |||||||||||| ||||||||||||    
T  31418776 ttaggctttgtttgagagtttggaggggagaggaaggaatgactttgaggga---aaatataggaaaaaattgataaatctttcacagtttttgaaagag 31418872  T
Q  280 tatttttgtagaga--aataaattaatgtttatgattaatatat 321  Q
    ||||| | ||||||   ||||||||||| |||||||||||||||    
T  31418873 tatttgtttagagagtgataaattaatgcttatgattaatatat 31418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 210 - 329
Target Start/End: Complemental strand, 18397148 - 18397026
Alignment:
Q  210 gggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgt 306  Q
    ||||||||| ||||||||||| | | |||||||| |||||||| |||||||||||||||||||||||||||||||||  || |||   ||||||||| |     
T  18397148 gggaaggaaagactttgggggtcgagaaatatagaggaaaattgagaaatctttcacattttttgaaagagtattttcttaaagagtgataaattaaagc 18397049  T
Q  307 ttatgattaatatatttttaatt 329  Q
    ||||||||||||||| |||||||    
T  18397048 ttatgattaatatatatttaatt 18397026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 210 - 329
Target Start/End: Complemental strand, 18399836 - 18399714
Alignment:
Q  210 gggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt--ttgtagagaaataaattaatgt 306  Q
    ||||||||| ||||||||| | | | |||||||| |||||||| |||||||||||| |||||||||||||||||||  ||  |||| ||||||||||||     
T  18399836 gggaaggaaagactttgggagtcgagaaatatagaggaaaattgagaaatctttcaaattttttgaaagagtattttcttaaagagtaataaattaatgc 18399737  T
Q  307 ttatgattaatatatttttaatt 329  Q
    ||||||||||||||| |||||||    
T  18399736 ttatgattaatatatatttaatt 18399714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 55813453 - 55813595
Alignment:
Q  186 tttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 285  Q
    ||||||||| |||||||| || || | ||| || | |||||||||| | |||||||||| |||| | | ||||| |||||||||||||||||||||||||    
T  55813453 tttgtttggaagtttggaggggagtgaaagaaaaggctttgggggataaaaatatagggaaaaaataaaaaatcattcacattttttgaaagagtatttt 55813552  T
Q  286 tgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |  || |  ||||||||||| ||||||||||||||||| |||||    
T  55813553 ta-agtgtgataaattaatgcttatgattaatatatttataatt 55813595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 6836608 - 6836513
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||| ||||  ||| |||  ||||||||||| |||||||||||||||||||||||    
T  6836608 aaatataggagaaaattgagaactctttcacattttttgaaagagt-ttttgttagtgaatgataaattaatgcttatgattaatatatttttaatt 6836513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 329
Target Start/End: Complemental strand, 48620546 - 48620402
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    ||||||||||||||| ||||||||| || ||||||||||| | ||||||||| | | |||||||||| |||||| |       |||||||||||||||||    
T  48620546 cttaggctttgtttgcgagtttggaggggaggggaaggaaaggctttggggggagagaaatatagggaaaaattga-------ttcacattttttgaaag 48620454  T
Q  278 agtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    | |||||||  | ||  ||||||| ||| |||||||||||||||||||||||    
T  48620453 aatattttttcacagtgataaattcatgcttatgattaatatatttttaatt 48620402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 13984796 - 13984937
Alignment:
Q  185 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 284  Q
    ||||||||  ||||||||| || |||||| |||| |  || |||||| | |||| ||  |||||||| || ||||||||| |||||||||||||||||||    
T  13984796 ctttgttttagagtttggaggggaggggagggaaggttttggggggagagaaatgtaaaggaaaattgaggaatctttcatattttttgaaagagtattt 13984895  T
Q  285 ttgtagaga--aataaattaatgtttatgattaatatattttt 325  Q
    || ||||||  |||||||||||| ||||||||||||| |||||    
T  13984896 tt-tagagagtaataaattaatgcttatgattaatatcttttt 13984937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 42650895 - 42650772
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||| ||||||||| || | ||||||||| | |||||||||   | |||||||||| |||||| | |||||||||||| |||||||||||||    
T  42650895 aggctttgtttgtgagtttggaggggaagggaaggaagggctttggggggtgagaaatatagggaaaaattgataaatctttcacaatttttgaaagagt 42650796  T
Q  281 atttttgtagagaaataaattaat 304  Q
     ||||| |||||  ||||||||||    
T  42650795 gtttttttagagtgataaattaat 42650772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 42759524 - 42759619
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaata-aattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| |||||||||   |||||||||||||||||||||||||||  ||| |||||||  | |||||| |||||||||||||||||||||||||    
T  42759524 aaatatatgggaaaattgtaaaatctttcacattttttgaaagagtaaatttttagagaatgataattaacgtttatgattaatatatttttaatt 42759619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 329
Target Start/End: Original strand, 46669827 - 46669913
Alignment:
Q  246 aaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| |||||||||||||||||||| |||||||| ||||| |||||||  ||||||| ||| |||||||||||||||||||||||    
T  46669827 aaaattgagaaatctttcacatttttttaaagagtattttttttagagaatgataaatttatgcttatgattaatatatttttaatt 46669913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 49936689 - 49936615
Alignment:
Q  257 atctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||| | |||||||||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  49936689 atctttcacattttttgtaggagtatttttttagagaatgataaattaatgcttatgattaatatatttttaatt 49936615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 222 - 329
Target Start/End: Complemental strand, 21443244 - 21443135
Alignment:
Q  222 ctttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtag--agaaataaattaatgtttatgattaatat 319  Q
    ||||| || ||||||||||| ||||||||| | |||||||||| ||||||||||||||||| ||| |||   |  ||||||||||| |||| ||||||||    
T  21443244 ctttgaggaacataaatatatgggaaaattaataaatctttcatattttttgaaagagtatgtttttagtaggtgataaattaatgcttattattaatat 21443145  T
Q  320 atttttaatt 329  Q
    ||||||||||    
T  21443144 atttttaatt 21443135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 328
Target Start/End: Original strand, 46176772 - 46176904
Alignment:
Q  197 gtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa-- 294  Q
    ||||||| || ||||||||| | |||||||||||    ||||| || || ||||  ||||||||| |||||||||||||||||||||||| |||||||      
T  46176772 gtttggaggggaggggaagggaagactttgggggtggaaaataaagagggaaatggagaaatctt-cacattttttgaaagagtatttttttagagaatg 46176870  T
Q  295 ataaattaatgtttatgattaatatatttttaat 328  Q
    ||||| ||||| |||||||| |||||||||||||    
T  46176871 ataaactaatggttatgattcatatatttttaat 46176904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 30307569 - 30307482
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga-aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| |||||||||||||||||||| || |||||||||| ||||||    ||| ||||| |||||||||||||||||||||||    
T  30307569 gggaaaattgagaaatctttcacatttttttaatgagtatttttttagagagtgaaaaataatgcttatgattaatatatttttaatt 30307482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 45022427 - 45022505
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||||||| |||||||  |||||| |||| ||||||| || || |||||||||    
T  45022427 agaaatctttcacattttttgaaagagtatttttttagagaactataaatgaatgcttatgatcaacatgtttttaatt 45022505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 324
Target Start/End: Original strand, 9119112 - 9119210
Alignment:
Q  227 ggggacataaatataggggaaaattcagaaatctttcacatttt-ttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttt 324  Q
    |||||||||||||||| |||||||| |||||||||||| ||||| |||||||  ||| |||  ||||  |||||||||||  |||||||||||||||||    
T  9119112 ggggacataaatatagaggaaaattgagaaatctttcatattttgttgaaagtatatgtttagagagtgataaattaatgcatatgattaatatatttt 9119210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 34713137 - 34713066
Alignment:
Q  256 aatctttcacattttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||| ||||||||| ||  ||||||||||  |||||| ||||||||||||||||||||||||||||    
T  34713137 aatctttcacatattttgaaagtgt--ttttgtagagtgataaatgaatgtttatgattaatatatttttaatt 34713066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 6121523 - 6121430
Alignment:
Q  185 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggggac-ataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    |||| |||||||||||| | || ||||||||||| |||||||| |||  | ||||||| ||||||||| ||||||||||||||| |||||||||    
T  6121523 ctttatttgggagtttgtaggggaggggaaggaaagactttggaggaagagaaatataagggaaaattgagaaatctttcacatattttgaaag 6121430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 15451229 - 15451305
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||||| |||| || | ||  ||||||||||| ||||||||||||||||| |||||    
T  15451229 aaatctttcacattttttgaaagagtaattttttaaataatgataaattaatgcttatgattaatatatttctaatt 15451305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 24662639 - 24662715
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||| |||||||||| |||| |||||||  |||||| |||| ||||||||||||| |||||||||    
T  24662639 aaatctttcacattttctgaaagagtaattttttagagaatgataaatcaatgcttatgattaatatttttttaatt 24662715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 18318888 - 18318963
Alignment:
Q  256 aatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| ||||||||||||||||||||  || |||  |||||||||||| ||||||||||||||| |||||||    
T  18318888 aatctttcaaattttttgaaagagtattttcttaaagagtaataaattaatgcttatgattaatatatatttaatt 18318963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 24802673 - 24802759
Alignment:
Q  245 gaaaattcagaaatctttcacattttttgaaagagtatttttgta--gagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| | |||||||||||||||||||||| |||||||||  |  |||  ||||||||||| |||||||||||||||||| ||||    
T  24802673 gaaaattgaaaaatctttcacattttttgaaaaagtattttttcagggagtgataaattaatgattatgattaatatattttaaatt 24802759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 27143429 - 27143379
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 285  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  27143429 aaatatatgggaaaaatgagaaatctttcacattttttgaaagagtatttt 27143379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 325
Target Start/End: Complemental strand, 42954823 - 42954725
Alignment:
Q  229 ggacataaatataggggaaaattcagaaat-ctttcacattttttgaaagagtat-ttttgtagagaaataaattaatgtttatgattaatatattttt 325  Q
    ||||| ||||||| |||| |||| |||||| |||||||| ||||||||||||| | ||||  ||||  ||||| |||||||||||||||||||||||||    
T  42954823 ggacaaaaatataagggagaattaagaaatactttcacaatttttgaaagagtttcttttagagagtgataaactaatgtttatgattaatatattttt 42954725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 8828102 - 8828174
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||| |||||||||||| ||| ||| | |||| |||||||  |||||||||||||||||||||||||||||||    
T  8828102 aaatgtttcacatttttcgaatgagcaattttttagagaatgataaattaatgtttatgattaatatattttt 8828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 9021143 - 9021051
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||||||||||    |||||||||||||||||| ||||| || |||| ||||| |  ||||||||||| ||||| |||||||||||||    
T  9021143 aaatataggggaaaatggtaaaatctttcacattttttaaaagattaattttttagagtatgataaattaatgcttatggttaatatattttt 9021051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 25844026 - 25843959
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatat 319  Q
    |||||||||||| |||||| ||||||||| |||| |||||||  |||||||||||||||||||||||||    
T  25844026 agaaatctttcatattttt-gaaagagtaattttttagagaagaataaattaatgtttatgattaatat 25843959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 329
Target Start/End: Original strand, 41495461 - 41495608
Alignment:
Q  185 ctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatt 283  Q
    ||||||||| |||||||||| ||| ||||| ||| || ||||| |||  | |||||||| | |||||    |||||||| | ||||||| || ||||| |    
T  41495461 ctttgtttgagagtttggaaagaatgggaaagaacgattttggagggttaaaaatatagagaaaaatggtaaaatcttttatattttttaaacgagtaat 41495560  T
Q  284 tttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||| || ||||  ||| |||||||||||||||||||||||||||||||    
T  41495561 tttttaaagaatgatagattaatgtttatgattaatatatttttaatt 41495608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 47063898 - 47063795
Alignment:
Q  228 gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||| | |||||||| |||||| ||||||| ||| ||||||| |||||| | | ||| ||||||   ||||||| ||| |||||||||||||||||||    
T  47063898 gggacaaacatatagggaaaaattgagaaatcattcgcatttttcgaaagattgtgtttttagagagtgataaattgatgcttatgattaatatattttt 47063799  T
Q  326 aatt 329  Q
    ||||    
T  47063798 aatt 47063795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 4441921 - 4441991
Alignment:
Q  262 tcacattttttgaaagagtatt-tttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||| ||| ||||||   ||||||||||| |||||||||||||||||||||||    
T  4441921 tcacattttttaaaagagtattatttttagagagtgataaattaatgcttatgattaatatatttttaatt 4441991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 32648902 - 32648972
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||| | |||| |||||||  ||||| ||||  |||||||||||||||||||||||    
T  32648902 ttcacattttttgaaagagcagttttttagagaatgataaactaatacttatgattaatatatttttaatt 32648972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 38136652 - 38136802
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||||||||||||| || | ||||||||| | ||||| ||||    ||||||  ||||||||  |||||||||||| |   ||| |||||||    
T  38136652 aggctttgtttgggagtttggaggggaagggaaggaaaggctttgaggggtgcaaaatatgagggaaaatagagaaatctttcaaaaaatttaaaagagt 38136751  T
Q  281 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    | |||| |||||||  |||||||||||  |||||||| | |||||||||||    
T  38136752 agttttttagagaatgataaattaatgcatatgattactttatttttaatt 38136802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 27485154 - 27485231
Alignment:
Q  255 aaatctttcacattttttgaaagagtattt-ttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||| |||||||| || || |||| ||  |||||| |||| |||||||||||||||||||||||    
T  27485154 aaatctttcacatttttttaaagagtaattattttagaaaatgataaatgaatgcttatgattaatatatttttaatt 27485231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 53013734 - 53013700
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||||||||    
T  53013734 ataaattaatgtttatgattaatatatttttaatt 53013700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 38644677 - 38644636
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa 294  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  38644677 agaaatctttcacattttttgaaagactatttttttagagaa 38644636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 3075651 - 3075687
Alignment:
Q  250 ttcagaaatctttcacattttttgaaagagtattttt 286  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3075651 ttcagaaatctttcacattttttgaaagcgtattttt 3075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 39089814 - 39089739
Alignment:
Q  254 gaaatctttcacattttttgaaagagtatttttgtagagaa--ataaa-ttaatgtttatgattaatatattttta 326  Q
    ||||| ||||| | ||||||||||||||||||| |||||||  | ||| |||||| ||||||||||||||||||||    
T  39089814 gaaatttttcataatttttgaaagagtatttttttagagaatgacaaagttaatgcttatgattaatatattttta 39089739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 52430418 - 52430466
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatt 283  Q
    ||||||||||||||||| | ||||||||||||| |||||||| ||||||    
T  52430418 aaatataggggaaaattgaaaaatctttcacatcttttgaaatagtatt 52430466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 54206069 - 54205982
Alignment:
Q  244 ggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||  |||||| ||||| ||||||||||||||||| ||| |||||||  ||||| || ||| ||||||||||| ||||| ||||    
T  54206069 ggaaaatagagaaatgtttcatattttttgaaagagtatctttttagagaatgataaactactgtgtatgattaatacattttaaatt 54205982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 329
Target Start/End: Complemental strand, 368256 - 368170
Alignment:
Q  246 aaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| |||||||||||| |  |||| |||||||| ||||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  368256 aaaattgagaaatctttcaaaaattttaaaagagtagtttttttagagaatgataaattaatgcatatgattactatatttttaatt 368170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 904380 - 904310
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||| || |||| |||||||  ||||| ||||  |||||||||||||| ||||||||    
T  904380 ttcacattttttgaaagaatagttttttagagaatgataaactaatacttatgattaatatacttttaatt 904310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 329
Target Start/End: Complemental strand, 32579323 - 32579288
Alignment:
Q  294 aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||| ||||||||||||||||||    
T  32579323 aataaattaatgtttataattaatatatttttaatt 32579288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 37662834 - 37662756
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| || ||||||||||  |||||||||||| ||||||   ||||| ||||| ||||| |||||||||||||||||    
T  37662834 agaaattttccacatttttttgaagagtatttttttagagagtgataaaataatgcttatgtttaatatatttttaatt 37662756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 41844618 - 41844548
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||  | |||| |||||||  ||||||||||  |||||||||||||| ||||||||    
T  41844618 ttcacattttttgaaagaacaattttttagagaatgataaattaatacttatgattaatatacttttaatt 41844548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 516202 - 516168
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||| ||||||||||||||||||    
T  516202 ataaattaatgtttataattaatatatttttaatt 516168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 27143325 - 27143291
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||||||||||||||||    
T  27143325 ataaattaatgcttatgattaatatatttttaatt 27143291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 31428978 - 31428914
Alignment:
Q  266 attttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||| |||| ||||||||  |||||||| ||||||| ||||||||||| |||||    
T  31428978 attttttgaaagagtaatttt-tagagaaagataaattaacgtttatggttaatatatttataatt 31428914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 40424316 - 40424382
Alignment:
Q  185 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaatt 251  Q
    |||||||||||||||| |||||  ||||||| || ||||||| ||  |||||||||| |||||||||    
T  40424316 ctttgtttgggagtttagaagggtggggaagaaaggactttgtggatcataaatatatgggaaaatt 40424382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 47047450 - 47047416
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||| ||||||||||||||    
T  47047450 ataaattaatgtttatgattgatatatttttaatt 47047416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 34236429 - 34236469
Alignment:
Q  255 aaatctttcacattttttgaaagagt-atttttgtagagaa 294  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  34236429 aaatctttcacattttttgaaagagtgatttttttagagaa 34236469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 35959430 - 35959382
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg 230  Q
    |||||||||||||||||||||| || ||||| ||||| | |||||||||    
T  35959430 aggctttgtttgggagtttggaggggaggggtaggaaaggctttggggg 35959382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 41364025 - 41363985
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaa 218  Q
    |||||||||||||||||||||||||| || |||||| ||||    
T  41364025 acttaggctttgtttgggagtttggaggggaggggagggaa 41363985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 54240624 - 54240656
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaa 327  Q
    |||||||||||||||| ||||||||||||||||    
T  54240624 ataaattaatgtttataattaatatatttttaa 54240656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 329
Target Start/End: Original strand, 22556522 - 22556672
Alignment:
Q  181 taggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||||  |||||||| || ||| ||||||| | || | ||||| | |||||||||| |||||| |||||||||||||||||||| |||||||    
T  22556522 taggctttgtttgtaagtttggaggggaggagaaggaaaggctctcggggatagaaatatagggaaaaattgagaaatctttcacattttttaaaagagt 22556621  T
Q  281 atttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| ||||||   ||||| ||||| |||||||||||||||||||||||    
T  22556622 atttttttagagagtgataaactaatgcttatgattaatatatttttaatt 22556672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 329
Target Start/End: Original strand, 33187710 - 33187815
Alignment:
Q  226 gggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtaga--gaaataaattaatgtttatgattaatatattt 323  Q
    |||||||| ||||||||||||||||| | |||| |||||||| |||||||||||||||||  ||||  |  ||||||||||| |||||||||||||||||    
T  33187710 gggggacaaaaatataggggaaaattgaaaaatatttcacatcttttgaaagagtattttcttagagggtgataaattaatgcttatgattaatatattt 33187809  T
Q  324 ttaatt 329  Q
    ||||||    
T  33187810 ttaatt 33187815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 4787875 - 4787971
Alignment:
Q  236 aatataggggaaaattcagaaatctttcacattttttgaaagagt-atttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||| |||||| ||||||   ||||||||||| |||||||||||||||||||||||    
T  4787875 aatatagggaaaaattgagaaatttttcacattttttgaaagagtaatttttttagagagtgataaattaatgcttatgattaatatatttttaatt 4787971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 38138140 - 38138044
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||   || ||||||||||||||||||| ||||||||||| |||||||  ||||||||||| |||||||||||| ||||||||||    
T  38138140 aaatataggggaaaagagagtaatctttcacattttttgatagagtatttttttagagaatgataaattaatgcttatgattaatacatttttaatt 38138044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 6746400 - 6746547
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggga-cataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||||||||||| |||| ||||||| | | |  ||||||||  |  |||||| |||||||||  |||||||||||| || |||||||||| |    
T  6746400 aggctttgtttgggagtttg-aagggaggggaatggagggttttggggggtcgaaaatatgggggaaaatggagaaatctttcaaatattttgaaagatt 6746498  T
Q  281 atttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    | |||| ||||  |||||||||||||||||||||| |||||||||||||    
T  6746499 agttttttagactaataaattaatgtttatgattactatatttttaatt 6746547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 23465818 - 23465968
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||||||||||||| || ||||||||| | |||||||  |||    ||||||||||||||||    |||||||||||||||||| ||||| |    
T  23465818 aggctttgtttgggagtttggaggggaggggaagggaagactttgaagggttggaaatataggggaaaatggtaaaatctttcacattttttaaaagaat 23465917  T
Q  281 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    | |||| |||||||  ||||||||||  ||||||||||||||| |||||||    
T  23465918 agttttttagagaatgataaattaattcttatgattaatatatatttaatt 23465968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 329
Target Start/End: Complemental strand, 31055560 - 31055465
Alignment:
Q  237 atataggggaaaattcagaaatctttcacattttt-tgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| ||||||||| ||||||||||||||||||| | ||||||| ||||| ||||||   ||||||||||| |||||||||||||||||||||||    
T  31055560 atataagggaaaattgagaaatctttcacatttttataaaagagtgtttttttagagagtgataaattaatgcttatgattaatatatttttaatt 31055465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 374432 - 374504
Alignment:
Q  259 ctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||| ||||||||||||| |||| ||  |||| ||||||||||||||||||||||||||||||    
T  374432 ctttcacattttttaaaagagtatttttttagataataataatttaatgtttatgattaatatatttttaatt 374504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 14676439 - 14676343
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||    ||||||||||||||||||||||||||| |||| ||| |||  ||||||||||| ||||| |||||||||||| ||||    
T  14676439 aaatataggggaaaatggtcaaatctttcacattttttgaaagagtaattttttagggaatgataaattaatgcttatggttaatatattttcaatt 14676343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 328
Target Start/End: Original strand, 42112774 - 42112926
Alignment:
Q  180 ttaggctttgtttgggagtttggaaggaaggggaaggaatgacttt-gggggacataaatataggggaaaattcagaaatctttcacattt-tttgaaag 277  Q
    |||||||||||||||||||||||| || ||||||||||| |  ||| |||||    || ||||| |  ||||  ||||||||||||||||| ||||||||    
T  42112774 ttaggctttgtttgggagtttggaggggaggggaaggaagggttttagggggtgggaagtatagagagaaatggagaaatctttcacatttctttgaaag 42112873  T
Q  278 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    ||| ||||| |||||||  ||||| ||||| |||||||| |||||||||||||    
T  42112874 agtgtttttttagagaatgataaactaatgcttatgattcatatatttttaat 42112926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 327
Target Start/End: Original strand, 44487202 - 44487301
Alignment:
Q  230 gacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaa 327  Q
    |||| ||| ||||| ||||||| | |||||||||||||||||| | ||||||||||| ||||||   ||||||||||| ||||| |||||||||||||||    
T  44487202 gacaaaaaaataggtgaaaattgataaatctttcacatttttttatagagtatttttttagagagtgataaattaatgcttatggttaatatatttttaa 44487301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 45510526 - 45510455
Alignment:
Q  260 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||| |||| |||||||  |||||||||||||||||||||||||||||| ||||    
T  45510526 tttcacattttgtgaaagagtaattttttagagaatgataaattaatgtttatgattaatatattttaaatt 45510455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 38505162 - 38505312
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||||||||||||| || ||||||||| | | ||||| ||||    |||| |  ||||||||  |||||||||||| ||||||| |||||||    
T  38505162 aggctttgtttgggagtttggaggggaggggaagggaaggctttgaggggtggaaaatttgagggaaaatggagaaatctttcaaattttttaaaagagt 38505261  T
Q  281 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    | |||| |||||||  |||||||||||   ||||||| |||||||||||||    
T  38505262 agttttttagagaatgataaattaatgcagatgattactatatttttaatt 38505312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 329
Target Start/End: Complemental strand, 36907544 - 36907396
Alignment:
Q  184 gctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtat 282  Q
    ||||||||||||| |||||| || ||||||| ||| |||||||| |||    ||||||||| |||||     |||||||||||||||||| ||| | ||     
T  36907544 gctttgtttgggaatttggaggggaggggaatgaaagactttggagggttgaaaatataggagaaaaaggtaaaatctttcacattttttaaaatactaa 36907445  T
Q  283 ttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| |||| ||  ||||||||||||||||||||| |||||||||||||    
T  36907444 ttttttagataatgataaattaatgtttatgattactatatttttaatt 36907396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 41471709 - 41471601
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacat-aaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    |||||||| |||||||||||||||| ||||||||||   | | |||||||||     ||||||||||| ||||  ||| |||||||||||||||||||||    
T  41471709 cttaggctctgtttgggagtttggagggaaggggaattgagggctttggggggtgggaaatatagggggaaatggagagatctttcacattttttgaaag 41471610  T
Q  278 agtattttt 286  Q
    |||||||||    
T  41471609 agtattttt 41471601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 40985271 - 40985330
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa 294  Q
    |||||||||  |||||  |||||| |||||||||||||||||||||||||||||||||||    
T  40985271 aaatataggaaaaaatagagaaatatttcacattttttgaaagagtatttttgtagagaa 40985330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 24923297 - 24923362
Alignment:
Q  266 attttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||  |||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  24923297 attttttgaaagagtggttttttagagaatgataaattaatgattatgattaatatatttttaatt 24923362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 329
Target Start/End: Complemental strand, 21687693 - 21687546
Alignment:
Q  186 tttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 284  Q
    |||||||||||||| | |  | ||||||||||| |  ||||| |||| | |||||||||| |||||| | |||||||| |||| |||| |||||||||||    
T  21687693 tttgtttgggagttagaagaggaggggaaggaaaggttttggagggatagaaatatagggaaaaattgaaaaatcttttacatcttttaaaagagtattt 21687594  T
Q  285 ttgt---agagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    || |   ||||  ||||||||||| ||||  |||||||||||||||||    
T  21687593 ttattaaagagtgataaattaatgattatatttaatatatttttaatt 21687546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 43230164 - 43230088
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| ||||||||||| ||||||||| |||  ||  |||||||||| || |||||||||||||||||||||    
T  43230164 aaatctttcatattttttgaaatagtatttttttagtaaatgataaattaatattaatgattaatatatttttaatt 43230088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 327
Target Start/End: Original strand, 46611757 - 46611849
Alignment:
Q  237 atataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaa 327  Q
    ||||||||| ||||| | ||||||||||||||||||||||||  |||||| ||||||   ||||| ||||  ||||||||||| |||||||||    
T  46611757 atatagggggaaattgataaatctttcacattttttgaaagataatttttttagagagtgataaactaatacttatgattaatgtatttttaa 46611849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 41714110 - 41714173
Alignment:
Q  264 acattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||| |||||||||||||||||||||   |||||||||||| ||| |||||||||||||    
T  41714110 acattttttaaaagagtatttttgtagagaatgttaaattaatgttaatggttaatatattttt 41714173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 23552386 - 23552335
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtattttt 286  Q
    |||||||| | |||||| |||||| |||||||||||||||||||||||||||    
T  23552386 aaatatagagaaaaattgagaaatttttcacattttttgaaagagtattttt 23552335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 31770306 - 31770252
Alignment:
Q  277 gagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||  |||||| |||||||||||||||||||||| |||||    
T  31770306 gagtatttttgtagagaatgataaataaatgtttatgattaatatatttgtaatt 31770252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 32229031 - 32228928
Alignment:
Q  185 ctttgtttgggagtttggaaggaaggggaaggaatgactttggggg----acataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||| |||||||| ||||| |||| ||| |||||||| ||    | | ||||||||   |||| | ||||||||||||||||||||||||||||    
T  32229031 ctttgtttggaagtttggagggaagaggaatgaaggactttggagggaaaaaaaaaatatagaaaaaaaatgagaaatctttcacattttttgaaagagt 32228932  T
Q  281 attt 284  Q
    ||||    
T  32228931 attt 32228928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 38987540 - 38987506
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||||||||    
T  38987540 ataaattaatgtttatgattaatatatttttaatt 38987506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 43348111 - 43348207
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| || |||||  || |||||||||  |||||| |||||||| |||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  43348111 aaatataaggaaaaatagagtaatctttcaatttttttaaaagagtagttttttagagaacaataaattaatgcatatgattattatatttttaatt 43348207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 45066931 - 45066836
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| |||||||  |||||||||||| ||||| | |||||| |||| | || ||||  |||||||||| ||||||||||| ||||||||||||    
T  45066931 aaatatagcggaaaatgaagaaatctttcaaattttgttaaagagcatttct-taaagaatgataaattaatatttatgattaacatatttttaatt 45066836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 35489904 - 35489956
Alignment:
Q  275 aagagtatttttgtagagaaa-taaattaatgtttatgattaatatattttta 326  Q
    ||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||    
T  35489904 aagagtatttttgtagataaaataaatgaatgtttaagattaatatattttta 35489956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 17818477 - 17818399
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||| ||||| | ||||| || |||| |||||||  |||||||||||| ||| |||| |||||||||||||    
T  17818477 agaaatctttcaaattttctaaaagaatagttttttagagaatgataaattaatgtatataattactatatttttaatt 17818399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 28437440 - 28437510
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||  | |||| |||||||  ||||| |||| ||||||||||||||| ||||||||    
T  28437440 ttcacattttttgaaagaacaattttttagagaatgataaactaatatttatgattaatatacttttaatt 28437510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 30081594 - 30081531
Alignment:
Q  223 tttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattttt 286  Q
    ||||||||||| |||||||||||||||||  ||||  |||||||| |||| ||||||| |||||    
T  30081594 tttgggggacaaaaatataggggaaaattttgaaaattttcacatattttaaaagagttttttt 30081531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 33810110 - 33810180
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| ||||||||||||| || |||| |||||||  ||||| |||| ||||||||||||||| ||||||||    
T  33810110 ttcatattttttgaaagaataattttttagagaatgataaactaatatttatgattaatatacttttaatt 33810180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 286
Target Start/End: Complemental strand, 35682854 - 35682744
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg--acataaatataggggaaaattcagaaatctttcacattttttgaa 275  Q
    ||||| ||||||||||||||||| || || ||| ||||||| | | |||||||  | ||||||||| | |||| || | |||||||||| ||||||||||    
T  35682854 acttaagctttgtttgggagtttagaggggaggagaaggaagggcattgggggggagataaatatatgagaaatttgataaatctttcatattttttgaa 35682755  T
Q  276 agagtattttt 286  Q
    || || |||||    
T  35682754 agtgttttttt 35682744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 38991363 - 38991437
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||| | ||||||| ||||||| | ||| |||||||  ||||||||| |||||| ||||||||||||||    
T  38991363 agaaatcttttatattttttcaaagagtgtatttttagagaatgataaattaaagtttataattaatatattttt 38991437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 42593060 - 42593095
Alignment:
Q  294 aataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||| |||||||||||||||||||    
T  42593060 aataaattaatgtttacgattaatatatttttaatt 42593095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 325
Target Start/End: Complemental strand, 46509448 - 46509382
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||| | |||||| | || |||||||  ||||||||||||||||| |||||||||||||    
T  46509448 ttcacatttttttagagagtaatgttttagagaatgataaattaatgtttatggttaatatattttt 46509382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 324
Target Start/End: Original strand, 48775922 - 48776063
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    |||||||||||||||| ||||||||| || |||||||| || |       |||| | || |||| | ||||||| | |||||||| | ||||| | ||||    
T  48775922 acttaggctttgtttgagagtttggaggggaggggaagaaaag-------gggagagaagtataagagaaaattgataaatcttttatattttcttaaag 48776014  T
Q  278 agtatttttgtagagaa--ataaattaatgtttatgattaatatatttt 324  Q
    ||||||||| ||||||   ||||||||||  ||||||||||||||||||    
T  48776015 agtatttttttagagagtgataaattaattcttatgattaatatatttt 48776063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 1278140 - 1278094
Alignment:
Q  226 gggggacataaatataggggaaaattcagaaatctttcacatttttt 272  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||||||    
T  1278140 gggggacaaaaatatagggggaaattgagaaatctttcaaatttttt 1278094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 30081170 - 30081089
Alignment:
Q  246 aaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||| ||||||||||||  |||||| |||||||| |||| |||||||   |||||||||||||| ||||| || ||||||    
T  30081170 aaaattgagaaatctttcaatttttttaaaagagtagttttttagagaatggtaaattaatgtttaagattactacattttt 30081089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 425728 - 425634
Alignment:
Q  238 tataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa----ataaattaatgtttatgattaatatatttttaat 328  Q
    |||||||  ||||| |||| | |||| |||||||||||| ||||||||| |  ||||    |||||||| ||||||| |||||||||||||||||    
T  425728 tatagggataaattgagaattttttctcattttttgaaatagtatttttttttagaaattgataaattattgtttattattaatatatttttaat 425634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 32650283 - 32650359
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| || | |||||||||||||| |||| |||||||  |||||||||||  |||||||| | |||||||||||    
T  32650283 aaatcttacaaaatttttgaaagagtagttttttagagaatgataaattaatgcatatgattattttatttttaatt 32650359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 36845333 - 36845409
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaatt 329  Q
    |||| |||||||||||||||||||| |  ||| |||||||   |||||||||  ||||||||| |||||||||||||    
T  36845333 aaatatttcacattttttgaaagagaaactttttagagaatgttaaattaatacttatgattactatatttttaatt 36845409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 38679864 - 38679913
Alignment:
Q  237 atataggggaaaattcagaaatctttcacattttttgaaagagtattttt 286  Q
    |||||||| ||| || | ||||||||||||||||||||||| ||||||||    
T  38679864 atatagggaaaatttgataaatctttcacattttttgaaagtgtattttt 38679913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 42266899 - 42266975
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| ||| ||||||||||||| | || |||| |||||||  ||||||||||| ||||| ||| |||||||||||||    
T  42266899 aaatttttaacattttttgaaaaaataattttttagagaatgataaattaatgcttatgtttactatatttttaatt 42266975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 23128187 - 23128123
Alignment:
Q  211 ggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttga 274  Q
    ||||| ||||| ||||| |||||| ||||||| | ||||||| | ||||||||||||||||||||    
T  23128187 ggaagaaatgattttggagggacaaaaatatacgtgaaaattgaaaaatctttcacattttttga 23128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 37334840 - 37334901
Alignment:
Q  266 attttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||| |||| ||  ||  ||||||||| ||||||||||||| ||||||||||    
T  37334840 attttttgaaagagtaattttttaacga--taaattaatctttatgattaataaatttttaatt 37334901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 9e-30; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 179 - 329
Target Start/End: Original strand, 1839635 - 1839788
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    ||||||||||||||| ||||||||| || | ||||||||| | ||||||||| ||| || ||||| |||||||| |||||||||||||||||||||||||    
T  1839635 cttaggctttgtttgcgagtttggaggggaagggaaggaaaggctttggggggacaaaattatagaggaaaattgagaaatctttcacattttttgaaag 1839734  T
Q  278 agtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| ||||||   ||||||||||   ||| |||||||||| |||||||    
T  1839735 agtatttttttagagagtgataaattaatacatatcattaatatatgtttaatt 1839788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 329
Target Start/End: Original strand, 10878599 - 10878750
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatga-ctttggg-ggacataaatataggggaaaattcagaaatctttcacattttttgaa 275  Q
    |||||||||||||||| |||||||||  | |||||| |||| || ||||||| ||||| ||||||| ||||||||| |||||||||| || |||||||||    
T  10878599 acttaggctttgtttgagagtttggagaggagggga-ggaaagagctttgggaggacaaaaatataagggaaaattgagaaatctttaactttttttgaa 10878697  T
Q  276 agagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| ||||||   |||||||||   |||||||||||||||||||||||    
T  10878698 agagtatttttttagagagtgataaattaa---ttatgattaatatatttttaatt 10878750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 327
Target Start/End: Original strand, 9054337 - 9054477
Alignment:
Q  190 tttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgt 288  Q
    |||||||||||||| || ||||||| ||| || |||||||| | | |||||||| |||||||| |||||||||||||||||||||||||| ||||||| |    
T  9054337 tttgggagtttggatgggaggggaatgaaagaatttggggggagaaaaatatagaggaaaattgagaaatctttcacattttttgaaagaatattttttt 9054436  T
Q  289 ag--agaaataaattaatgtttatgattaatatatttttaa 327  Q
    ||  ||  |||| ||| || |||||||||||||||||||||    
T  9054437 agatagtgataagttagtgcttatgattaatatatttttaa 9054477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 32158974 - 32158878
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| |||||||| |||||||||||||||||||  ||||||||||||| ||||||  |||||||||||| ||||| |||||||||||||||||    
T  32158974 aaatatagaggaaaattgagaaatctttcacatttttgtaaagagtatttttttagagagtaataaattaatgattatggttaatatatttttaatt 32158878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 329
Target Start/End: Complemental strand, 8948882 - 8948738
Alignment:
Q  186 tttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 285  Q
    |||||||| ||||||||| ||| ||| |||||||||||||| || | | |||||| |||||||||| ||||||||||||||| ||||||| |||||||||    
T  8948882 tttgtttgagagtttggatgga-gggcaaggaatgactttgagg-atagaaatatcggggaaaattaagaaatctttcacatattttgaaggagtatttt 8948785  T
Q  286 tgt---agagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    | |   ||||  || |||||||||||||||||||||| |||||||||    
T  8948784 ttttagagagtgatcaattaatgtttatgattaatatgtttttaatt 8948738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 13258676 - 13258599
Alignment:
Q  254 gaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||||||||| ||| |||||||||||||||||||    
T  13258676 gaaatctttcacattttttgaaagagtatttttttagagaatgataaattaatgcttacgattaatatatttttaatt 13258599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 27085550 - 27085461
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagtatttttgt---agagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| |   ||||  ||||||||||| |||||||||||||||||||||||    
T  27085550 gggaaaattgagaaatctttcacatttgttgaaagagtattttttttagagagtgataaattaatgcttatgattaatatatttttaatt 27085461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 35376511 - 35376601
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttt 324  Q
    ||||||||||||||||  || ||||||| |||||||||| |||||||||||| ||||||  |||||||||||| ||||||||||||||||||    
T  35376511 aaatataggggaaaatggaggaatctttaacattttttggaagagtattttt-tagagaacaataaattaatgcttatgattaatatatttt 35376601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 29584437 - 29584287
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttg-ggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    |||||||||||| ||||||||| |||||||||||||| | ||||| ||||    |||||   ||||||||  |||||||||||| ||||||| |||| ||    
T  29584437 aggctttgtttgcgagtttggagggaaggggaaggaaaggctttgaggggtggaaaatacgagggaaaatgaagaaatctttcaaattttttaaaagtgt 29584338  T
Q  281 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    | |||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  29584337 agttttttagagaatgataaattaatgcatatgattactatatttttaatt 29584287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 325
Target Start/End: Complemental strand, 3394150 - 3394078
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||| ||||||||||||||||||| ||||  ||||||  |||||||||||||||||||||||||||||||    
T  3394150 aaatcttgcacattttttgaaagagtaatttttaagagaatgataaattaatgtttatgattaatatattttt 3394078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 325
Target Start/End: Complemental strand, 37388468 - 37388396
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||||||||||||||||||  ||| |||||||  ||||||||| |||||||||||||||||||||    
T  37388468 aaatctttcacattttttgaaagagtaaatttttagagaatgataaattaaagtttatgattaatatattttt 37388396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 39194123 - 39194045
Alignment:
Q  253 agaaatctttcaca-ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    |||||||||||||| |||||||||||||| ||||| |||||||  ||||| |||||||||||||| |||||||||||||    
T  39194123 agaaatctttcacacttttttgaaagagtgtttttttagagaatgataaactaatgtttatgattcatatatttttaat 39194045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 40984968 - 40985042
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| ||||||||||||  || |||| |||||||  |||||||||||||||||||||||||||||||||||    
T  40984968 aaatctttcatattttttgaaag--taattttttagagaatgataaattaatgtttatgattaatatatttttaatt 40985042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 42589730 - 42589823
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||  |||||  ||||||||||||||||||| | ||||||| ||||| |||||||  ||||||||||| |||||||||||||||||||    
T  42589730 aaatataggaaaaaatggagaaatctttcacatttttcggaagagtattttttttagagaagtataaattaatgcttatgattaatatattttt 42589823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 10590062 - 10589917
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagta 281  Q
    ||||||||||||||||||| || |||||||||| ||| |  | |||| |     |||||||||||||||| |||||| ||| | ||||||| ||||||||    
T  10590062 aggctttgtttgggagtttagagggaaggggaatgaaaggttctgggagg----aatataggggaaaattgagaaatttttaatattttttaaaagagta 10589967  T
Q  282 tttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| ||||||   |||||| |||| ||||| |||||||||||| ||||    
T  10589966 tttttttagagagttataaataaatgcttatgcttaatatattttaaatt 10589917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 13537519 - 13537455
Alignment:
Q  267 ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||| |||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  13537519 ttttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaatt 13537455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 13627067 - 13627003
Alignment:
Q  267 ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||| |||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  13627067 ttttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaatt 13627003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 328
Target Start/End: Complemental strand, 31150167 - 31150016
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaaga 278  Q
    |||||| ||| |||||||||||||||   ||| ||| ||| ||||||||| |    |||||| | |||||||   ||||| ||||||||||||| || ||    
T  31150167 cttaggatttatttgggagtttggaaatgaggagaatgaaagactttgggtgtgggaaatattgaggaaaatggtgaaatatttcacatttttttaagga 31150068  T
Q  279 gtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    || |||||||||||||  ||||| | |||||||||||| |||||||||||||    
T  31150067 gtgtttttgtagagaatgataaactgatgtttatgattcatatatttttaat 31150016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 16424329 - 16424251
Alignment:
Q  253 agaaatctttcacattttttgaaagagta--tttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| ||||||||||||||||||||||  |||||  |||| ||||||||| || |||| ||||||||||||||||||    
T  16424329 agaaatttttcacattttttgaaagagtatctttttaaagagcaataaattactgcttataattaatatatttttaatt 16424251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 28416043 - 28416118
Alignment:
Q  229 ggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaataaattaat 304  Q
    ||||| |||||||| |||||| | | |||||||||||||||||||||||||||||| | |||||  ||||||||||    
T  28416043 ggacaaaaatatagaggaaaaatgaaaaatctttcacattttttgaaagagtatttgtttagagtgataaattaat 28416118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 23963272 - 23963167
Alignment:
Q  183 ggctttgtttgggagtttggaaggaaggg----gaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaag 277  Q
    |||||||||||| |||||||| ||| |||    ||||||| ||||||||||| ||  |||||||| |||||||| |||||||||| |||||||| |||||    
T  23963272 ggctttgtttggtagtttggagggaggggatgggaaggaaagactttggggggaccgaaatatagaggaaaattgagaaatcttttacattttt-gaaag 23963174  T
Q  278 agtattt 284  Q
    |||||||    
T  23963173 agtattt 23963167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 35616749 - 35616673
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||| | |||||||| |||||| |||| ||||||   ||||||||||||||| |||||||||||||||||||    
T  35616749 aaatctttctctttttttgagagagtaattttttagagattgataaattaatgtttaagattaatatatttttaatt 35616673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 35856422 - 35856498
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| | | ||||||||||||||||||| |||||||  |||| ||||| |||||||| |||||||||||||||    
T  35856422 aaatcttttaaaatttttgaaagagtatttttttagagaatgataagttaatatttatgatgaatatatttttaatt 35856498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 326
Target Start/End: Original strand, 5158927 - 5159002
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttta 326  Q
    ||||||||||||| |||| | ||||||| ||||||| |||||  ||||||||||| ||||||| ||||||||||||    
T  5158927 agaaatctttcactttttgttaaagagtgtttttgtggagaatgataaattaatgcttatgatcaatatattttta 5159002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 11742709 - 11742634
Alignment:
Q  256 aatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||| | || |||| |||||||  ||||||||||| |||| |||| |||||||||||||    
T  11742709 aatctttcacattttttgaaaaattagttttttagagaatgataaattaatggttatcattattatatttttaatt 11742634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 31305639 - 31305699
Alignment:
Q  226 gggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattttt 286  Q
    |||||||| ||||||||||||||||| | ||||| |||||||||||||||| ||| |||||    
T  31305639 gggggacaaaaatataggggaaaattgaaaaatccttcacattttttgaaatagttttttt 31305699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 39418242 - 39418172
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatat 321  Q
    ||||||||| ||||||| ||||||| || ||||||||| |||  |||||| ||||||||||||||||||||    
T  39418242 agaaatcttccacatttattgaaagggtgtttttgtagggaatgataaatgaatgtttatgattaatatat 39418172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 32365 - 32266
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga---aataa--attaatgtttatgattaatatatttttaatt 329  Q
    |||||| ||| |||||  ||||||||||||||||||||||||||||| ||||  |||||   | |||  | |||| ||||||||||||||||||||||||    
T  32365 aaatatggggaaaaatagagaaatctttcacattttttgaaagagtagtttttaagagagtgactaattaataatatttatgattaatatatttttaatt 32266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 5941253 - 5941181
Alignment:
Q  255 aaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttt 324  Q
    ||||||||||||||||||||||||||| ||||| | ||| |  ||||||||||| |||| |||||||||||||    
T  5941253 aaatctttcacattttttgaaagagtaattttttttgagtatgataaattaatgcttataattaatatatttt 5941181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 13406835 - 13406754
Alignment:
Q  184 gctttgtttgggagtttggaaggaaggggaaggaatgactttgggg-gacataaatataggggaaaattcagaaatctttca 264  Q
    |||||||||||||||||||| |  ||| ||||||| | |||||||| |||| |||||||||||||  || ||||||||||||    
T  13406835 gctttgtttgggagtttggaggagaggagaaggaagggctttggggagacaaaaatataggggaattttgagaaatctttca 13406754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 13369799 - 13369888
Alignment:
Q  245 gaaaattcagaaatctttcacattttttgaaagagta---tttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| |||||||||||| ||||||| ||||||||   ||||| |||||||  |||||||||||  || ||||| |||||||||||||    
T  13369799 gaaaattgagaaatctttcaaattttttaaaagagtaatttttttttagagaatgataaattaatgcatacgattactatatttttaatt 13369888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 32503010 - 32502946
Alignment:
Q  266 attttttgaaagagtatttttgtagagaaata-aattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||| ||||||||||||  | ||| ||||||||| ||||||||||||||||||    
T  32503010 attttttgaaatagtaattttgtagagaatgataataaatgtttattattaatatatttttaatt 32502946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 11226218 - 11226333
Alignment:
Q  180 ttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcaca-ttttttgaaaga 278  Q
    |||||||||||||||||||||||| ||  |||||||  | ||||| |||||  | |||||||| |||||||  |||||  ||||| | ||||||||| ||    
T  11226218 ttaggctttgtttgggagtttggaggggtggggaagcgaggacttcgggggtaagaaatatagaggaaaatgaagaaaattttcatatttttttgaagga 11226317  T
Q  279 gtatttttgtagagaa 294  Q
    |||||| | |||||||    
T  11226318 gtatttgtttagagaa 11226333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 26042438 - 26042346
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| ||||||||||| |||||||| | ||||| |||||  |||||||||| || ||  ||||||||||  || | ||||||||||||||||||    
T  26042438 aaatacaggggaaaattgagaaatctcttacattctttga--gagtatttttttaaagtgataaattaatacttgtaattaatatatttttaatt 26042346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 6038155 - 6038098
Alignment:
Q  270 tttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||| ||| |||||||||||  ||||||||||| ||||||| |||||||||||    
T  6038155 tttgaaagattatatttgtagagaataataaattaatggttatgatcaatatattttt 6038098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Original strand, 7079928 - 7079962
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||||||||||||||||    
T  7079928 ataaattaatgcttatgattaatatatttttaatt 7079962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 35353974 - 35353940
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| ||||||||||||||||||||||||    
T  35353974 ataaattaatatttatgattaatatatttttaatt 35353940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 329
Target Start/End: Original strand, 41540372 - 41540468
Alignment:
Q  234 taaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||  |||||||| | |||||||| ||||||||| ||| | | ||||| ||||||  |||||||||||  | |||||||||||||||||||||    
T  41540372 taaatatataggaaaattgaaaaatcttttacatttttttaaatatttttttt-tagagagtaataaattaatactcatgattaatatatttttaatt 41540468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 1840027 - 1840076
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttggg 228  Q
    |||||||||||||||||||||||||||| |  |||||||| | |||||||    
T  1840027 cttaggctttgtttgggagtttggaagggacaggaaggaagggctttggg 1840076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 15108156 - 15108232
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| ||||||||||||| || |||| |||||||  |||||||||   |||||||||||||| || |||||    
T  15108156 aaatctttcatattttttgaaagaataattttttagagaatgataaattaacacttatgattaatatacttataatt 15108232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 38404550 - 38404458
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatattttt 325  Q
    |||||||| |||||||  |||||||| ||| | ||||| ||||| ||| ||| |||| ||   ||||||||| ||||||||||||||||||||    
T  38404550 aaatatagaggaaaatggagaaatctctcataattttttaaagaatatatttttagaaaatggtaaattaatatttatgattaatatattttt 38404458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 4266656 - 4266713
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa 294  Q
    ||||||||  ||||||| ||||||||||||| |||||||||  ||||||||| |||||||    
T  4266656 aaatatagatgaaaattgagaaatctttcactttttttgaa--agtatttttttagagaa 4266713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 5935414 - 5935330
Alignment:
Q  192 tgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaa 276  Q
    ||||||||||||  | ||||||| |||   ||||| |||| | ||||||| || |||||| | ||||||||||||||||||||||    
T  5935414 tgggagtttggagaggaggggaaagaaaagctttgagggagagaaatatatggaaaaattgataaatctttcacattttttgaaa 5935330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 1934925 - 1935075
Alignment:
Q  182 aggctttgtttgggagtttggaaggaagggg-aaggaatgactttggg-ggacataaatatagggga-aaattcagaaatctttcacattttttgaaaga 278  Q
    ||||| ||||||||||||| || || ||||| |||||| | ||||||| ||||| |||||||||||  ||||| |||||||||||||||||||| |||||    
T  1934925 aggctgtgtttgggagtttcgaggggagggggaaggaagggctttgggaggacaaaaatataggggggaaattgagaaatctttcacattttttaaaaga 1935024  T
Q  279 gtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
     ||||||| |||||  ||||||||||| |||||||||||||||||||||||    
T  1935025 ctatttttttagagtgataaattaatgcttatgattaatatatttttaatt 1935075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 329
Target Start/End: Original strand, 3936397 - 3936548
Alignment:
Q  181 taggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagag 279  Q
    ||||||||||||| ||||||| |||| ||||||||||| ||||||||||| | | |||| |||||||||||| |||||||||||| | ||||||||||||    
T  3936397 taggctttgtttgcgagtttgaaagggaggggaaggaaagactttggggggagagaaatgtaggggaaaattaagaaatctttcataatttttgaaagag 3936496  T
Q  280 tatttttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||  ||||||   | ||||||||||||||  ||||||||||| |||||    
T  3936497 tattttcttagagagtgaaaaattaatgtttatatttaatatatttctaatt 3936548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 316
Target Start/End: Complemental strand, 15917659 - 15917518
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatgacttt-gggggacataaatataggggaaaattcagaaatctttcacattttttgaaa 276  Q
    |||||| ||||||||||||||||||| || ||| ||||||| ||| |  |||||||| |||||||  ||||| || |||||||||||| |||||||||||    
T  15917659 acttagactttgtttgggagtttggatgggaggagaaggaaagacctcagggggacaaaaatataaaggaaatttgagaaatctttcatattttttgaaa 15917560  T
Q  277 gagtatttttgtagaga--aataaattaatgtttatgattaa 316  Q
    |||||||||||||||||   ||||||||||||||||| ||||    
T  15917559 gagtatttttgtagagagtgataaattaatgtttatggttaa 15917518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 4841526 - 4841677
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaa-ttcagaaatctttcacattttttgaaagag 279  Q
    |||||||||||||||||||||| || ||||||| ||| | |||| | |||| | |||||||||  |||| || |||||||||||||||||||| ||||||    
T  4841526 aggctttgtttgggagtttggaggggaggggaaagaaaggctttcgagggagagaaatataggacaaaaattaagaaatctttcacatttttttaaagag 4841625  T
Q  280 ta--tttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||  ||||| |||||  ||||||||||| |||||||||||||||||||||||    
T  4841626 tatttttttatagagtgataaattaatgcttatgattaatatatttttaatt 4841677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 329
Target Start/End: Original strand, 9684605 - 9684759
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttttgaaa 276  Q
    |||||||||||||||||||||||||| || | ||||||| | | ||| || |||    ||||||||||||||||    ||||||| ||||||||||||||    
T  9684605 acttaggctttgtttgggagtttggaggggaagggaagggaaggcttaggagggttggaaatataggggaaaatgggaaaatcttccacattttttgaaa 9684704  T
Q  277 gagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| |||| |||| ||  ||||||||||| |||||||||||||||||||||||    
T  9684705 gagtaattttttagaaaatgataaattaatgcttatgattaatatatttttaatt 9684759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 329
Target Start/End: Complemental strand, 39012088 - 39011944
Alignment:
Q  185 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtattt 284  Q
    |||||||||||||||||||   |||| ||| | | ||||||| |||| | ||||||| ||||||||| ||||| ||||||||||||||||||||  ||||    
T  39012088 ctttgtttgggagtttggagaaaaggagaatgtaagactttgtgggagagaaatatacgggaaaattgagaaa-ctttcacattttttgaaagatgattt 39011990  T
Q  285 ttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    || ||||||   ||||||||||| |||||||||||||||||||||||    
T  39011989 tt-tagagagtgataaattaatgcttatgattaatatatttttaatt 39011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 31633023 - 31632947
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| |||| || ||||||||||||||||||||    
T  31633023 aaatctttcacattttttgaaagagtatttttgtagagaatgataaatgaatgcttctgattaatatatttttaatt 31632947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 329
Target Start/End: Original strand, 3081150 - 3081300
Alignment:
Q  181 taggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    ||||||||||||| |||||||||  | |||||||||||    ||||||||||  || ||||| ||||||||  |||| ||||||||  |||||||| |||    
T  3081150 taggctttgtttgcgagtttggagaggaggggaaggaaaagatttgggggactgaattatagaggaaaattgtgaaacctttcacaaattttgaaatagt 3081249  T
Q  281 atttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||  |||||   ||||||| ||| |||||||||||||||||||||||    
T  3081250 attttttgagagagtgataaattgatgcttatgattaatatatttttaatt 3081300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 9096519 - 9096424
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| |||| ||||  |||||| | ||||||||||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||||||||||    
T  9096519 aaatatggggggaaatggagaaatttgtcacattttttgaaaaagtattttt-tagagaatgataaattaatgtttttgattaatatatttttaatt 9096424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 19389720 - 19389796
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||| ||||||||||| || |||| |||||||  ||||||||||| |||||||||||||||||||||||    
T  19389720 aaatctttcacaatttttgaaagattaattttttagagaatgataaattaatgcttatgattaatatatttttaatt 19389796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 3924746 - 3924824
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| |||||||||||||||| ||||||| |||| |||||||  ||||||||||||||| ||||| |||||||||||||    
T  3924746 agaattctttcacattttttggaagagtaattttttagagaatgataaattaatgtttaagattactatatttttaatt 3924824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 35704821 - 35704727
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaa 327  Q
    |||||||||  |||||  ||||||||||||||||||||||||  |||||||| |||||||  |||||||| || ||||||||||| |||||||||    
T  35704821 aaatataggaaaaaatagagaaatctttcacattttttgaaaatgtatttttttagagaatgataaattagtgcttatgattaatgtatttttaa 35704727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 32824858 - 32824761
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgt-agagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| ||||  |||||||||| |||  ||||| || ||||||||| | ||||||  |||||||||||||||||||||||||||||||||||    
T  32824858 aaatatagggggaaatggagaaatcttttacacattttgtaatagtattttttttagagaataataaattaatgtttatgattaatatatttttaatt 32824761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 12063854 - 12063954
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagta------tttttgtagagaaataaattaatgtttatgattaatatatttttaat 328  Q
    |||||||||| |||||| |||||| ||||| ||||||||||||||||      ||||| |||||  ||||||||||| ||||| ||||||||||||||||    
T  12063854 aaatatagggaaaaattgagaaatttttcatattttttgaaagagtatttttttttttatagagtgataaattaatgcttatggttaatatatttttaat 12063953  T
Q  329 t 329  Q
    |    
T  12063954 t 12063954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 17668026 - 17668102
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||||||||||| |||| ||| |||  ||||||||||| ||||| |||||||||||| ||||    
T  17668026 aaatctttcacattttttgaaagagtaattttttagggaatgataaattaatgcttatgcttaatatattttcaatt 17668102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 19337041 - 19337189
Alignment:
Q  177 gacttaggctttgtttgggagtttggaagga-aggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaa 275  Q
    ||||| |||||| |||| ||||||| ||||| |||||||||||   |||||||||||| ||  || || ||| ||| | |||| ||||||||||||| ||    
T  19337041 gacttgggctttctttgagagtttg-aaggagaggggaaggaagagctttgggggacaaaagaatcggagaacattgataaatttttcacattttttaaa 19337139  T
Q  276 agagtatttttgtagagaaataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||  ||||  ||||||||||| |||| |||||||| |||||    
T  19337140 agagtatttttagagagtgataaattaatgcttataattaatattttttt 19337189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 28523807 - 28523731
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| ||||||||||||| |  |||| || ||||  |||||||||||||||||||||||||||||||||||    
T  28523807 aaatctttcatattttttgaaagaatgattttttaaagaatgataaattaatgtttatgattaatatatttttaatt 28523731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 1175851 - 1175913
Alignment:
Q  268 tttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    |||||||||| || |||||||||||||  |||||| |||||||||||||||||||||||||||    
T  1175851 tttttgaaagggtgtttttgtagagaatgataaatgaatgtttatgattaatatatttttaat 1175913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 21916121 - 21916228
Alignment:
Q  181 taggctttgtttgggagtttggaaggaaggggaaggaatgactttggggga-cataaatataggggaaaattcagaaatctttcacatt-ttttgaaaga 278  Q
    |||||||| |||||||||||||| |||| ||||||| ||||||||||||||  | |||||||  ||||| |   ||||||||||||||| |||||||| |    
T  21916121 taggctttatttgggagtttggagggaaagggaagggatgactttgggggatgagaaatataaaggaaactggtgaaatctttcacattcttttgaaata 21916220  T
Q  279 gtattttt 286  Q
    ||||||||    
T  21916221 gtattttt 21916228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 27350905 - 27350970
Alignment:
Q  262 tcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||||| |||||||| |||| |||||||  ||||||||||| |||||||||||||||||||    
T  27350905 tcacatttttttaaagagtaattttttagagaacgataaattaatgattatgattaatatattttt 27350970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 35704925 - 35705014
Alignment:
Q  242 ggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||  ||| ||||| | ||||||||||| ||||||| || |||| ||  ||||||||||| |||||||||||||||||||||||    
T  35704925 ggggaaaatggagagatcttcctcattttttgaatgagtattcttttagaaaatcataaattaatgcttatgattaatatatttttaatt 35705014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 329
Target Start/End: Complemental strand, 37909188 - 37909104
Alignment:
Q  246 aaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| ||||| |||||||||||| || |||||||||||| |||||||  |||||||||||||||| ||| ||| ||||||||||    
T  37909188 aaaattgagaaagctttcacattttctggaagagtattttt-tagagaatgataaattaatgtttataattgataaatttttaatt 37909104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 35042393 - 35042317
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| |||||||||||||  | |||| |||||||  ||||||||||||||||||| | |||||||||||||    
T  35042393 aaatctttcatattttttgaaagataaattttttagagaatgataaattaatgtttatgatcactatatttttaatt 35042317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 15400015 - 15399928
Alignment:
Q  244 ggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||| || |||||||||||| ||||||| | |||| |||||||   || |||||| ||||||||||||||||||||||||    
T  15400015 ggaaaattgagatatgtttcacatttttcgaaagagcaattttttagagaatgctagattaatttttatgattaatatatttttaatt 15399928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 22114897 - 22114818
Alignment:
Q  253 agaaatctttcacattttttgaaagagtat-ttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||| ||||||||| |||| |||||||  |||||| | |||| |||||| ||||||||||||||    
T  22114897 agaaatctttcacatttttttaaagagtattttttttagagaatgataaatcagtgttaatgattcatatatttttaatt 22114818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 329
Target Start/End: Complemental strand, 8944244 - 8944158
Alignment:
Q  246 aaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| |||||||||| | ||||||| |||||||| ||||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  8944244 aaaattgagaaatcttttaaattttttaaaagagtagtttttttagagaatgataaattaatgcatatgattactatatttttaatt 8944158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 344225 - 344147
Alignment:
Q  255 aaatctttcacatttttt--gaaagagtatttttgtagagaaat--aaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||  |||| |||| |||| ||||||| |  |||||||||||||| |||||| |||||||||||    
T  344225 aaatctttcacattttttttgaaaaagtaattttttagagaattgtaaattaatgtttataattaatgtatttttaatt 344147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 6373338 - 6373255
Alignment:
Q  245 gaaaattcagaaatctttcacattttttgaaagagtat-ttttgtag--agaaataaattaatgtttatgattaatatattttt 325  Q
    ||||||| |||||||||| ||||||||||||||||||| |||| |||  ||  ||||||||||  |||||||||||| ||||||    
T  6373338 gaaaattgagaaatcttttacattttttgaaagagtatgttttttagaaagtgataaattaatacttatgattaatacattttt 6373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 5696486 - 5696544
Alignment:
Q  267 ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattt 323  Q
    |||||||||| |||  ||||||||||||  ||||| |||||||||||||||||||||||    
T  5696486 ttttttgaaatagtgattttgtagagaatgataaactaatgtttatgattaatatattt 5696544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 26149786 - 26149716
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||| || |||| |||||||  ||||| |||| ||||||||| ||||| ||||||||    
T  26149786 ttcacattttttgaaagattagttttttagagaatgataaactaatatttatgattgatatacttttaatt 26149716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 35708610 - 35708677
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaaggaatgactttgggg-gacataaatatagggg 245  Q
    ||||||||||||||||||||||| | || ||||||||||| | |||||||| || | |||||||||||    
T  35708610 cttaggctttgtttgggagtttgaaggggaggggaaggaaaggctttggggagagagaaatatagggg 35708677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 35869013 - 35868943
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||| || |||| |||||||  ||||| ||||  |||||||||||||| ||||||||    
T  35869013 ttcacattttttgaaagaatagttttttagagaatgataaactaatacttatgattaatatacttttaatt 35868943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 1176471 - 1176394
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    ||||||| ||||  |||||||| ||| | |||||||||||||  |||||| ||| |||||| ||||||||||||||||    
T  1176471 agaaatcattcaacttttttgagagaatttttttgtagagaatgataaatgaatttttatgcttaatatatttttaat 1176394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Original strand, 5088804 - 5088838
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||| |||||||||||||||    
T  5088804 ataaattaatgtttatgataaatatatttttaatt 5088838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 6491331 - 6491297
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||||||||||||||||    
T  6491331 ataaattaatgcttatgattaatatatttttaatt 6491297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 7147542 - 7147508
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||| ||||||||||||    
T  7147542 ataaattaatgtttatgattaaaatatttttaatt 7147508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 324
Target Start/End: Complemental strand, 14157166 - 14157136
Alignment:
Q  294 aataaattaatgtttatgattaatatatttt 324  Q
    |||||||||||||||||||||||||||||||    
T  14157166 aataaattaatgtttatgattaatatatttt 14157136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 26018888 - 26018854
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||||||||||||||||    
T  26018888 ataaattaatgcttatgattaatatatttttaatt 26018854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 325
Target Start/End: Complemental strand, 28154837 - 28154807
Alignment:
Q  295 ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||||||||||||||||||||||    
T  28154837 ataaattaatgtttatgattaatatattttt 28154807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 325
Target Start/End: Complemental strand, 29709657 - 29709627
Alignment:
Q  295 ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||||||||||||||||||||||||    
T  29709657 ataaattaatgtttatgattaatatattttt 29709627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 29799784 - 29799750
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||||||||||||||||    
T  29799784 ataaattaatgcttatgattaatatatttttaatt 29799750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 6373409 - 6373368
Alignment:
Q  184 gctttgtttgggagtttggaaggaaggggaaggaatgacttt 225  Q
    ||||||||||||||||||||  ||||||||||||| ||||||    
T  6373409 gctttgtttgggagtttggagtgaaggggaaggaaagacttt 6373368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 7782644 - 7782583
Alignment:
Q  190 tttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaatt 251  Q
    ||||||||||||||| | |||||||| ||  |||| |||| ||| |||||||||||||||||    
T  7782644 tttgggagtttggaatggaggggaagaaaatacttcggggcacaaaaatataggggaaaatt 7782583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 31535219 - 31535276
Alignment:
Q  267 ttttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttt 324  Q
    ||||||||||||||| |||| |||||||  | ||||||| ||||| ||||||||||||    
T  31535219 ttttttgaaagagtaattttttagagaatgatattaatgcttatggttaatatatttt 31535276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 33682561 - 33682485
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||| | |||||| |||| |||| ||  | ||||||||| |||| ||||||||||||| ||||    
T  33682561 aaatctttcacatttttttatagagtaattttttagaaaatgaaaaattaatgcttataattaatatattttaaatt 33682485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 4343040 - 4342964
Alignment:
Q  253 agaaatctttcacat-tttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaat 328  Q
    ||||||||||||||  ||||||| || || |||||  |||  ||| |||||||||||||||||| ||||||||||||    
T  4343040 agaaatctttcacaaatttttgatagtgtgtttttaaagaataatgaattaatgtttatgattattatatttttaat 4342964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 6632836 - 6632761
Alignment:
Q  256 aatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| |||||||||| ||| ||||||||| ||||||   |||||||||| ||| | |||| |||||||||||||    
T  6632836 aatcttccacattttttaaaaaagtatttttttagagagtgataaattaatatttgtaattagtatatttttaatt 6632761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 12097091 - 12097016
Alignment:
Q  256 aatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||||||||| |  ||| |||||||  ||||| ||||||| | |||||||||||||| ||||    
T  12097091 aatctttctcattttttgaaagagaaaatttatagagaatgataaactaatgttgaggattaatatattttaaatt 12097016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 15060093 - 15060160
Alignment:
Q  259 ctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttt 324  Q
    ||||||||||||||| ||| | | |||| |||||||   ||||||||| |||||||||||||||||||    
T  15060093 ctttcacattttttggaagggcaattttttagagaaccgtaaattaatatttatgattaatatatttt 15060160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 33677285 - 33677136
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattca---gaaatctttcacattttttgaaaga 278  Q
    |||||||||||||| ||||||| || || |||||||| |||||| ||||| | |||||||| | |||||| |   ||||||| |||||||||||||||||    
T  33677285 aggctttgtttgggtgtttggaggggagaggaaggaaagactttaggggaaagaaatatagagaaaaattgatgagaaatctgtcacattttttgaaaga 33677186  T
Q  279 gtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| | ||||  ||||||||||| |||||||||||||||||||||||    
T  33677185 gtattttag-agagtgataaattaatgcttatgattaatatatttttaatt 33677136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 185 - 329
Target Start/End: Complemental strand, 33184426 - 33184279
Alignment:
Q  185 ctttgtttgggagtttggaaggaaggggaaggaatgactttgggg-gacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatt 283  Q
    |||||||||||||||| || |||| | ||| |||  |||||| || || | ||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  33184426 ctttgtttgggagtttagagggaaagagaaagaaatactttgaggagagagaaatataagggaaaattaagaaatctttcatattttttgaaagagtatt 33184327  T
Q  284 tttgtagaga--aataaattaatgtttatgattaatatatttttaatt 329  Q
    ||| ||||||   |||||||||||||||| | ||||||||||||||||    
T  33184326 tttttagagagtgataaattaatgtttataactaatatatttttaatt 33184279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 329
Target Start/End: Original strand, 8439219 - 8439363
Alignment:
Q  186 tttgtttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 285  Q
    |||| ||||||||||||| || ||||||||||| || |||||| |  | ||||| | || |||||  |||||||||| | ||||||||||| ||||||||    
T  8439219 tttgcttgggagtttggagggtaggggaaggaaggattttgggtgtgaaaaataaaaggaaaaatagagaaatcttttatattttttgaaaaagtatttt 8439318  T
Q  286 tgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    | |||||||  |||||||||||||||||||||||||||||||||||    
T  8439319 t-tagagaatgataaattaatgtttatgattaatatatttttaatt 8439363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 597007 - 597099
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||||| |||||||||||  ||||||||||||||||||||| | |||||||    
T  597007 aaatatagggaaaaattaagaaatctttcatattttttcaaagagtatctttgtagagaacgataaattaatgtttatgattactgtattttt 597099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 321
Target Start/End: Original strand, 25073078 - 25073220
Alignment:
Q  183 ggctttgtttgggagtttggaagga--aggggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaagag 279  Q
    ||||||||||||||||||||| ||   ||||||||||  ||||||||||| | | |||||||||| |||||| ||||||||||||| |||| | ||||||    
T  25073078 ggctttgtttgggagtttggaggggggaggggaaggacagactttggggggagagaaatatagggaaaaattgagaaatctttcacgttttcttaaagag 25073177  T
Q  280 ta-tttttgtagagaaataaattaatgtttatgattaatatat 321  Q
    || ||||| |||||  ||||||||||| ||||||| |||||||    
T  25073178 tattttttttagagtgataaattaatgcttatgatcaatatat 25073220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 329
Target Start/End: Complemental strand, 2523600 - 2523505
Alignment:
Q  234 taaatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa-ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||| | |||||||||||| ||||||||| | |||| || ||||||  ||| || ||||||||||||||||||||||||||||    
T  2523600 taaatataagggaaaattgaaaaatctttcacactttttgaaaaa-tattgttttagagatgatacatcaatgtttatgattaatatatttttaatt 2523505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 2502196 - 2502246
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagtatttt 285  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  2502196 aaatatatgggaaaaatgagaaatctttcacattttttgaaagagtatttt 2502246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 16329568 - 16329492
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||||||||| || |||| |||||||  ||||||||||| | |||||||| ||||||||||||    
T  16329568 aaatcttttacattttttgaaagaataattttttagagaatgataaattaatgctaatgattaaaatatttttaatt 16329492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 26683505 - 26683430
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| |||||||||||||||| |||| | |||||  ||||||||||| || ||||||||||||||||||||    
T  26683505 aaatctttcatattttttgaaagagtaatttttt-gagaatgataaattaatgcttgtgattaatatatttttaatt 26683430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 33939016 - 33939091
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||| |||  ||| ||||  ||||||  |||||||||||||||||||||||||||||||||||    
T  33939016 aaatctttcacatttttttaaaatgtaatttta-agagaatgataaattaatgtttatgattaatatatttttaatt 33939091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 20381762 - 20381834
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||| |||||||||||||||| |||| | | ||  |||||||||| |||||||| ||||||||||||||    
T  20381762 aaatctttcatattttttgaaagagtagttttttgggga--taaattaatgattatgattgatatatttttaatt 20381834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 4465073 - 4465039
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||||||||||||||||||    
T  4465073 ataaattaatgtttatgattaatatatttttaatt 4465039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 13120313 - 13120390
Alignment:
Q  255 aaatctttcacatttttt-gaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||| ||||||||| |||| |||||||  |||||||||||  ||| ||||||||||||||||||    
T  13120313 aaatcttttacatttttttgaaagagtaattttttagagaatgataaattaatgagtataattaatatatttttaatt 13120390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 6695504 - 6695408
Alignment:
Q  236 aatataggggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatat-atttttaatt 329  Q
    |||||| || |||||  |||||| ||||| | ||||||||||||||||||| |||||||  |||||| |||| |||| |||||||| ||||||||||    
T  6695504 aatatatggaaaaatggagaaatttttcatactttttgaaagagtatttttttagagaatgataaatgaatgcttataattaatataatttttaatt 6695408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 32222179 - 32222119
Alignment:
Q  267 ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||||||||| || | |||||||  ||||||||||||||||||||| |||||||||    
T  32222179 ttttttgaaagagtagttgtttagagaatgataaattaatgtttatgattactatattttt 32222119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 32549696 - 32549768
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    |||||||| |||||| ||||||||||| |||| |||| ||  |||||||||| |||||||||| |||||||||    
T  32549696 aaatcttttacatttcttgaaagagtagttttctagaaaatgataaattaatatttatgattactatattttt 32549768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 22817246 - 22817309
Alignment:
Q  268 tttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| ||||||||||||| || ||||  |||||| |||| |||||||||||||||||||||||    
T  22817246 tttttaaaagagtatttttataaagaatgataaatgaatgcttatgattaatatatttttaatt 22817309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 33590219 - 33590297
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| |||||  |||||| |||||||| |||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  33590219 agaaatttttcaatttttttaaaagagtagttttttagagaatgataaattaatgcatatgattactatatttttaatt 33590297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Original strand, 2502300 - 2502334
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||| |||||||||||||||||||||||    
T  2502300 ataaattaatgcttatgattaatatatttttaatt 2502334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 4465175 - 4465077
Alignment:
Q  182 aggctttgtttgggagtttggaaggaag-gggaaggaatgactttggggg-acataaatataggggaaaattcagaaatctttcacattttttgaaaga 278  Q
    |||||||||||| ||||||| |||| |  ||||||||| | ||||||||| | | ||||||| | ||| ||| |||||||||||||||||||| |||||    
T  4465175 aggctttgtttgagagtttgaaagggatcgggaaggaaaggctttggggggagagaaatataagtgaatattgagaaatctttcacatttttttaaaga 4465077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 6855798 - 6855764
Alignment:
Q  295 ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||| ||||||||||||||||||||||    
T  6855798 ataaattaatgtatatgattaatatatttttaatt 6855764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 26289721 - 26289664
Alignment:
Q  274 aaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||| |||||||||||||||  |||||||||||  |||||||| |||||||||||||    
T  26289721 aaagattatttttgtagagaatgataaattaatgcatatgattactatatttttaatt 26289664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 8559185 - 8559246
Alignment:
Q  190 tttgggagtttggaaggaaggggaaggaatgactttgggggacataaatataggggaaaatt 251  Q
    |||| ||||||| || | |||||||| || |||||||||| ||| |||||||||||||||||    
T  8559185 tttgagagtttgaaatggaggggaagaaaagactttggggaacaaaaatataggggaaaatt 8559246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 9104826 - 9104913
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||  ||||||||||||  |||||||||||||||||| | |||||||  ||||| | ||| |||||||| |||| |||||||||    
T  9104826 gggaaaatggagaaatctttcatgttttttgaaagagtatttatttagagaatgataaact-atgcttatgattgatatttttttaatt 9104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 28551722 - 28551759
Alignment:
Q  179 cttaggctttgtttgggagtttggaaggaaggggaagg 216  Q
    ||||||||||||||||||||||||| || |||||||||    
T  28551722 cttaggctttgtttgggagtttggaggggaggggaagg 28551759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 31865229 - 31865188
Alignment:
Q  10 ctcactgttctctggctctgcgtatcagcattgcaatcacta 51  Q
    ||||| |||||||||||||| | |||||||||||||||||||    
T  31865229 ctcacggttctctggctctgtgcatcagcattgcaatcacta 31865188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 5825595 - 5825547
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatgactttggggg 230  Q
    |||||||||||||||||||||| || | |||| |||| |||||||||||    
T  5825595 aggctttgtttgggagtttggaggggaagggagggaaggactttggggg 5825547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 24735064 - 24734993
Alignment:
Q  260 tttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||||||||||||||  | |||| |||||||  ||||| ||||  |||||||||||||| ||||||||    
T  24735064 tttcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatacttttaatt 24734993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 1894 - 2045
Alignment:
Q  182 aggctttgtttgggagtttggaaggaaggggaaggaatga-ctttgggggacataaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    ||||||||||||||||||||||||| ||||||||||| || ||  |||||| | |||||||||| |||||| | |||||||| | ||||||||||| |||    
T  1894 aggctttgtttgggagtttggaagggaggggaaggaaagagctcggggggagagaaatatagggaaaaattgataaatcttttatattttttgaaatagt 1993  T
Q  281 atttttgt---agagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||| |   ||||  ||||||||||  |||| ||||| ||||||||||||    
T  1994 attttttttagagagtgataaattaatacttataattaaaatatttttaatt 2045  T

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Target: scaffold1763 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 496 - 572
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaaa--taaattaatgtttatgattaatatatttttaatt 329  Q
    |||| ||||||||||||||||||||||  ||| |||||||   ||||||||||||||||||||||||||||||||||    
T  496 aaatatttcacattttttgaaagagtaaatttttagagaatgttaaattaatgtttatgattaatatatttttaatt 572  T

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Target: scaffold0245 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 4337 - 4259
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||||| |||||||| |||| | |||||  ||||||||||| |||||||||||||||||||||||    
T  4337 agaaatctatcacattttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaatt 4259  T

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Target: scaffold0245; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 4021 - 4059
Alignment:
Q  175 gcgacttaggctttgtttgggagtttggaaggaagggga 213  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  4021 gcgacttaggctttgtttgggagtttggaggggagggga 4059  T

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Target: scaffold0229 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 4668 - 4590
Alignment:
Q  253 agaaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| ||||||||||| |||||||| |||| | |||||  ||||||||||| |||||||||||||||||||||||    
T  4668 agaaatctatcacattttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaatt 4590  T

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Target: scaffold0229; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 4352 - 4390
Alignment:
Q  175 gcgacttaggctttgtttgggagtttggaaggaagggga 213  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  4352 gcgacttaggctttgtttgggagtttggaggggagggga 4390  T

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Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 329
Target Start/End: Original strand, 59668 - 59829
Alignment:
Q  178 acttaggctttgtttgggagtttggaaggaagggga-----aggaatgactttgg-gggacataaatataggggaaaattcagaaatctttcacattttt 271  Q
    |||||||||||||||||||||||||| || ||||||     ||||| | |||||| |||| | ||||||||| ||||||| | |||| ||| ||||||||    
T  59668 acttaggctttgtttgggagtttggaggggaggggaggggaaggaaagtctttggagggagagaaatataggagaaaattgataaattttttacattttt 59767  T
Q  272 tgaaagagtatttttgt----agagaaataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||| ||||||| |    ||||  ||| ||||||  ||||||||||| |||||||||||    
T  59768 tgaaagactatttttttttagagagtgatagattaattcttatgattaatttatttttaatt 59829  T

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Target: scaffold0119 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 30655 - 30566
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| |||| |||||||||| | ||||||| |||||||| ||||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  30655 gggagaattgagaaatcttttaaattttttaaaagagtagtttttttagagaatgataaattaatgcatatgattactatatttttaatt 30566  T

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Target: scaffold0119; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 37323 - 37234
Alignment:
Q  243 gggaaaattcagaaatctttcacattttttgaaagagta-tttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||| |||| |||||||||| | ||||||| |||||||| ||||| |||||||  |||||||||||  |||||||| |||||||||||||    
T  37323 gggagaattgagaaatcttttaaattttttaaaagagtagtttttttagagaatgataaattaatgcatatgattactatatttttaatt 37234  T

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Target: scaffold0373 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 9024 - 8979
Alignment:
Q  235 aaatataggggaaaattcagaaatctttcacattttttgaaagagt 280  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||||    
T  9024 aaatataggagaaaattgagaactctttcacattttttgaaagagt 8979  T

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Target: scaffold0717 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 1761 - 1691
Alignment:
Q  261 ttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    ||||||||||||||||||  | |||| |||||||  ||||| ||||  |||||||||||||||||||||||    
T  1761 ttcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatatttttaatt 1691  T

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Target: scaffold0350 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 325
Target Start/End: Original strand, 1428 - 1485
Alignment:
Q  270 tttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatattttt 325  Q
    ||||||||| ||| |||||||||||  ||||||||||| ||||||| |||||||||||    
T  1428 tttgaaagattatatttgtagagaataataaattaatggttatgatcaatatattttt 1485  T

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Target: scaffold0927 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 2798 - 2877
Alignment:
Q  253 agaaatctttcaca--ttttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaat 328  Q
    ||||||||||||||  |||||||||||||| |||||  ||||||  ||||| ||||  |||||||| |||||||||||||    
T  2798 agaaatctttcacattttttttgaaagagtgttttttaagagaatgataaactaatacttatgattcatatatttttaat 2877  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 44869 - 44945
Alignment:
Q  255 aaatctttcacattttttgaaagagtatttttgtagagaa--ataaattaatgtttatgattaatatatttttaatt 329  Q
    |||||||| | ||||||| |||||||| |||| |||||||  |||| ||||||  |||||||| |||||||||||||    
T  44869 aaatcttttaaattttttaaaagagtaattttttagagaatgataatttaatgcatatgattactatatttttaatt 44945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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