View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10341_low_12 (Length: 294)

Name: NF10341_low_12
Description: NF10341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10341_low_12
NF10341_low_12
[»] chr5 (53 HSPs)
chr5 (136-284)||(33044962-33045110)
chr5 (19-135)||(39054654-39054768)
chr5 (35-135)||(7552857-7552957)
chr5 (21-134)||(2972393-2972504)
chr5 (33-135)||(5168262-5168364)
chr5 (33-135)||(39591759-39591861)
chr5 (33-135)||(39592151-39592253)
chr5 (22-135)||(7287079-7287190)
chr5 (19-134)||(13309950-13310063)
chr5 (33-129)||(27487966-27488062)
chr5 (35-135)||(33037601-33037701)
chr5 (39-143)||(13168607-13168711)
chr5 (33-135)||(1671621-1671723)
chr5 (22-135)||(26791134-26791245)
chr5 (33-135)||(28306022-28306124)
chr5 (33-135)||(36739027-36739129)
chr5 (22-129)||(7076464-7076569)
chr5 (41-132)||(8686978-8687069)
chr5 (22-108)||(14051232-14051316)
chr5 (52-135)||(17626084-17626167)
chr5 (33-135)||(35634725-35634828)
chr5 (22-92)||(8097320-8097390)
chr5 (33-135)||(41321334-41321436)
chr5 (34-135)||(1274438-1274538)
chr5 (22-104)||(33958180-33958260)
chr5 (33-135)||(1764303-1764405)
chr5 (33-135)||(14923152-14923254)
chr5 (33-135)||(15479548-15479650)
chr5 (33-135)||(18660838-18660939)
chr5 (33-135)||(22972196-22972298)
chr5 (35-135)||(18258683-18258783)
chr5 (33-135)||(21156067-21156169)
chr5 (33-83)||(21943637-21943687)
chr5 (35-83)||(6596412-6596460)
chr5 (35-135)||(19844200-19844300)
chr5 (53-104)||(2429106-2429157)
chr5 (19-89)||(4719718-4719786)
chr5 (22-133)||(27546134-27546245)
chr5 (19-129)||(33599030-33599137)
chr5 (33-88)||(35646462-35646517)
chr5 (33-84)||(41699533-41699584)
chr5 (33-135)||(28467343-28467445)
chr5 (41-98)||(1079879-1079936)
chr5 (35-84)||(6758731-6758780)
chr5 (22-62)||(19521966-19522004)
chr5 (35-104)||(21353225-21353294)
chr5 (33-86)||(35567580-35567633)
chr5 (71-140)||(42478075-42478144)
chr5 (35-87)||(13089719-13089771)
chr5 (35-83)||(20270650-20270698)
chr5 (51-115)||(24468201-24468265)
chr5 (35-135)||(25560908-25561007)
chr5 (33-65)||(29463075-29463107)
[»] chr8 (54 HSPs)
chr8 (19-135)||(37133752-37133866)
chr8 (35-134)||(36816507-36816606)
chr8 (33-135)||(29025339-29025441)
chr8 (19-135)||(10902772-10902880)
chr8 (33-135)||(11253432-11253534)
chr8 (22-135)||(36660340-36660451)
chr8 (35-132)||(27854661-27854758)
chr8 (22-135)||(4054176-4054287)
chr8 (33-135)||(27325837-27325939)
chr8 (33-98)||(10731625-10731690)
chr8 (19-132)||(10839375-10839486)
chr8 (33-135)||(22719519-22719621)
chr8 (33-131)||(34639612-34639710)
chr8 (37-135)||(37449315-37449413)
chr8 (33-135)||(39856117-39856219)
chr8 (22-84)||(41639738-41639800)
chr8 (54-135)||(24479323-24479404)
chr8 (33-134)||(32501087-32501188)
chr8 (32-104)||(7271928-7272000)
chr8 (33-84)||(45405611-45405662)
chr8 (33-135)||(13106559-13106661)
chr8 (33-135)||(34186686-34186788)
chr8 (19-68)||(32020420-32020469)
chr8 (35-131)||(12898823-12898919)
chr8 (35-135)||(23754596-23754696)
chr8 (35-135)||(42768285-42768385)
chr8 (56-135)||(32133425-32133504)
chr8 (33-131)||(36251406-36251503)
chr8 (31-88)||(2883265-2883322)
chr8 (33-102)||(43397860-43397929)
chr8 (22-84)||(6440152-6440212)
chr8 (22-85)||(42786597-42786660)
chr8 (22-129)||(44415760-44415867)
chr8 (22-98)||(5277426-5277500)
chr8 (35-84)||(33100411-33100460)
chr8 (19-86)||(5740724-5740789)
chr8 (41-135)||(44976894-44976990)
chr8 (36-83)||(43632280-43632327)
chr8 (35-109)||(144172-144246)
chr8 (33-87)||(5600924-5600978)
chr8 (33-87)||(5639642-5639696)
chr8 (41-135)||(7598796-7598889)
chr8 (35-133)||(12734903-12735001)
chr8 (34-84)||(42619921-42619971)
chr8 (33-63)||(44064437-44064467)
chr8 (35-84)||(67101-67150)
chr8 (39-84)||(3413133-3413178)
chr8 (35-84)||(8671496-8671545)
chr8 (22-98)||(31249451-31249525)
chr8 (33-62)||(44090966-44090995)
chr8 (19-62)||(10592243-10592284)
chr8 (35-87)||(25987724-25987776)
chr8 (35-83)||(34694861-34694909)
chr8 (39-83)||(40517343-40517387)
[»] chr2 (64 HSPs)
chr2 (33-135)||(27490620-27490722)
chr2 (35-135)||(8848587-8848687)
chr2 (33-135)||(41195663-41195765)
chr2 (31-135)||(37737861-37737965)
chr2 (33-135)||(2076648-2076750)
chr2 (22-135)||(3838770-3838881)
chr2 (33-135)||(9647211-9647313)
chr2 (19-131)||(18846678-18846788)
chr2 (33-141)||(9207669-9207777)
chr2 (22-135)||(22888707-22888822)
chr2 (35-131)||(29349587-29349683)
chr2 (22-135)||(18254099-18254210)
chr2 (35-135)||(1248767-1248867)
chr2 (33-133)||(19642677-19642777)
chr2 (35-134)||(6049236-6049335)
chr2 (52-135)||(13333060-13333143)
chr2 (37-135)||(19633365-19633464)
chr2 (37-135)||(19830266-19830365)
chr2 (33-135)||(7698250-7698352)
chr2 (33-135)||(9990770-9990872)
chr2 (33-135)||(32477411-32477513)
chr2 (19-135)||(1907653-1907767)
chr2 (34-135)||(44654704-44654805)
chr2 (52-135)||(41056637-41056720)
chr2 (22-135)||(7663957-7664067)
chr2 (52-135)||(3097751-3097834)
chr2 (52-135)||(25270472-25270555)
chr2 (19-133)||(39147833-39147945)
chr2 (33-135)||(16011511-16011613)
chr2 (22-84)||(33616536-33616598)
chr2 (22-135)||(34944980-34945091)
chr2 (33-131)||(41042333-41042431)
chr2 (22-135)||(42421788-42421899)
chr2 (37-135)||(43487462-43487560)
chr2 (19-95)||(10216917-10216991)
chr2 (36-134)||(42091393-42091493)
chr2 (19-83)||(44977441-44977503)
chr2 (33-84)||(12070927-12070978)
chr2 (33-135)||(9194320-9194422)
chr2 (33-135)||(9760097-9760199)
chr2 (22-84)||(12784337-12784399)
chr2 (33-83)||(42821451-42821500)
chr2 (33-98)||(6511330-6511395)
chr2 (33-98)||(22416292-22416357)
chr2 (29-82)||(22445967-22446020)
chr2 (34-135)||(31414990-31415091)
chr2 (37-88)||(1352472-1352523)
chr2 (33-84)||(14328461-14328512)
chr2 (33-84)||(19843564-19843615)
chr2 (32-87)||(36587408-36587463)
chr2 (39-73)||(10521309-10521343)
chr2 (33-63)||(14871718-14871748)
chr2 (33-86)||(7258500-7258553)
chr2 (40-89)||(16973697-16973746)
chr2 (52-89)||(33273523-33273560)
chr2 (82-135)||(42434247-42434300)
chr2 (35-135)||(43075964-43076064)
chr2 (47-83)||(7667204-7667240)
chr2 (31-63)||(14876794-14876826)
chr2 (35-135)||(17767934-17768034)
chr2 (33-125)||(19108993-19109085)
chr2 (47-135)||(28494953-28495041)
chr2 (35-83)||(33583164-33583212)
chr2 (31-63)||(44018318-44018350)
[»] chr6 (38 HSPs)
chr6 (19-135)||(22079453-22079567)
chr6 (35-135)||(277072-277172)
chr6 (35-135)||(4820448-4820548)
chr6 (19-135)||(26595416-26595530)
chr6 (37-135)||(11612271-11612369)
chr6 (33-126)||(3853206-3853299)
chr6 (35-135)||(32316818-32316918)
chr6 (41-135)||(33603170-33603264)
chr6 (37-134)||(2241917-2242013)
chr6 (35-134)||(3552046-3552145)
chr6 (33-135)||(552872-552974)
chr6 (33-135)||(1156799-1156901)
chr6 (33-135)||(14818011-14818113)
chr6 (19-135)||(5694041-5694155)
chr6 (35-104)||(34047468-34047537)
chr6 (41-125)||(11014890-11014974)
chr6 (52-135)||(16199548-16199631)
chr6 (22-132)||(18737460-18737568)
chr6 (33-135)||(15974687-15974789)
chr6 (33-135)||(24900853-24900955)
chr6 (41-134)||(30423443-30423536)
chr6 (20-135)||(30457573-30457686)
chr6 (33-135)||(31883193-31883295)
chr6 (45-135)||(33430252-33430342)
chr6 (22-98)||(5080494-5080568)
chr6 (19-135)||(17551269-17551382)
chr6 (22-135)||(31077863-31077975)
chr6 (19-83)||(25127772-25127836)
chr6 (37-88)||(13689931-13689982)
chr6 (22-84)||(1376435-1376497)
chr6 (22-84)||(1384183-1384245)
chr6 (33-83)||(20998087-20998137)
chr6 (19-83)||(6271417-6271477)
chr6 (94-135)||(91801-91842)
chr6 (22-98)||(8098524-8098598)
chr6 (22-62)||(1286982-1287022)
chr6 (31-59)||(12588341-12588369)
chr6 (35-87)||(14910258-14910310)
[»] chr3 (77 HSPs)
chr3 (19-135)||(28539630-28539744)
chr3 (19-135)||(35376971-35377085)
chr3 (39-135)||(37503637-37503733)
chr3 (33-135)||(5114157-5114259)
chr3 (33-135)||(41309196-41309298)
chr3 (33-136)||(44463436-44463539)
chr3 (35-135)||(42889066-42889166)
chr3 (35-134)||(42358529-42358628)
chr3 (33-131)||(13348028-13348126)
chr3 (33-135)||(55151607-55151709)
chr3 (22-135)||(33939306-33939419)
chr3 (35-98)||(44413849-44413912)
chr3 (33-135)||(35201324-35201426)
chr3 (33-135)||(46623986-46624088)
chr3 (33-133)||(5244308-5244408)
chr3 (35-135)||(37056947-37057047)
chr3 (51-135)||(44383286-44383370)
chr3 (32-135)||(42356974-42357077)
chr3 (35-133)||(11630642-11630740)
chr3 (33-135)||(24256661-24256763)
chr3 (22-135)||(27541392-27541503)
chr3 (33-135)||(38926707-38926809)
chr3 (22-135)||(44413285-44413396)
chr3 (22-135)||(44813204-44813317)
chr3 (35-135)||(36670904-36671004)
chr3 (22-104)||(20547911-20547991)
chr3 (52-135)||(21217610-21217693)
chr3 (52-135)||(23592556-23592639)
chr3 (33-135)||(288805-288907)
chr3 (41-135)||(32924171-32924265)
chr3 (33-135)||(35597241-35597343)
chr3 (41-135)||(51465631-51465725)
chr3 (33-135)||(52939730-52939832)
chr3 (39-104)||(8847195-8847260)
chr3 (36-92)||(14226638-14226694)
chr3 (22-104)||(45711360-45711440)
chr3 (19-135)||(9719338-9719456)
chr3 (33-135)||(19149069-19149171)
chr3 (22-135)||(34627771-34627882)
chr3 (33-135)||(44856032-44856134)
chr3 (22-135)||(52254028-52254139)
chr3 (33-135)||(52326098-52326200)
chr3 (22-83)||(55361175-55361234)
chr3 (33-98)||(41505570-41505635)
chr3 (19-135)||(51982166-51982280)
chr3 (35-83)||(32587739-32587787)
chr3 (35-83)||(35299816-35299864)
chr3 (19-134)||(39629729-39629842)
chr3 (19-65)||(6178385-6178429)
chr3 (71-134)||(23155329-23155392)
chr3 (68-135)||(23600707-23600774)
chr3 (19-89)||(33791706-33791774)
chr3 (33-84)||(36755991-36756042)
chr3 (33-104)||(37302625-37302696)
chr3 (33-135)||(16969456-16969558)
chr3 (33-135)||(26014891-26014993)
chr3 (41-135)||(31157567-31157661)
chr3 (33-131)||(47472408-47472506)
chr3 (70-131)||(39630511-39630572)
chr3 (33-86)||(50876301-50876354)
chr3 (33-133)||(12762581-12762681)
chr3 (39-135)||(49780630-49780726)
chr3 (19-133)||(50314692-50314808)
chr3 (22-84)||(26452663-26452723)
chr3 (20-66)||(48346895-48346939)
chr3 (33-84)||(52714813-52714864)
chr3 (22-84)||(54099297-54099357)
chr3 (37-95)||(3518537-3518595)
chr3 (33-87)||(32145923-32145977)
chr3 (35-133)||(34532270-34532368)
chr3 (20-66)||(40554842-40554888)
chr3 (35-85)||(44813387-44813437)
chr3 (37-83)||(52313056-52313102)
chr3 (33-62)||(9692805-9692834)
chr3 (35-63)||(1340143-1340171)
chr3 (33-81)||(8502834-8502882)
chr3 (33-89)||(45000142-45000198)
[»] chr1 (76 HSPs)
chr1 (35-135)||(26207923-26208022)
chr1 (19-135)||(18434862-18434976)
chr1 (22-135)||(44519041-44519152)
chr1 (35-135)||(31827032-31827132)
chr1 (37-135)||(50149029-50149127)
chr1 (33-134)||(45333790-45333891)
chr1 (19-135)||(49065254-49065368)
chr1 (35-135)||(19947634-19947734)
chr1 (35-135)||(30467423-30467523)
chr1 (35-135)||(30570605-30570705)
chr1 (22-135)||(3981916-3982027)
chr1 (37-131)||(26020970-26021064)
chr1 (33-135)||(33100887-33100989)
chr1 (33-135)||(48470718-48470820)
chr1 (19-135)||(9566850-9566964)
chr1 (33-134)||(43775285-43775386)
chr1 (33-133)||(35369779-35369879)
chr1 (35-135)||(45640383-45640482)
chr1 (32-131)||(50932382-50932481)
chr1 (33-135)||(649848-649950)
chr1 (22-135)||(19055649-19055760)
chr1 (33-135)||(25672421-25672523)
chr1 (33-135)||(26469438-26469540)
chr1 (33-135)||(31088260-31088362)
chr1 (22-135)||(50726138-50726249)
chr1 (51-129)||(51137547-51137625)
chr1 (47-135)||(21401491-21401579)
chr1 (35-135)||(27464947-27465047)
chr1 (35-131)||(37685410-37685506)
chr1 (35-131)||(37700012-37700108)
chr1 (31-135)||(45121371-45121474)
chr1 (52-135)||(46907293-46907376)
chr1 (22-135)||(52576191-52576303)
chr1 (19-108)||(8846041-8846130)
chr1 (22-86)||(740892-740956)
chr1 (35-131)||(6809661-6809757)
chr1 (35-98)||(6693238-6693301)
chr1 (22-92)||(15082983-15083051)
chr1 (19-89)||(27533420-27533488)
chr1 (37-104)||(37274954-37275021)
chr1 (76-131)||(40328663-40328718)
chr1 (19-101)||(50775080-50775160)
chr1 (35-135)||(2571715-2571817)
chr1 (33-135)||(9988031-9988133)
chr1 (35-89)||(29359718-29359772)
chr1 (33-131)||(37619623-37619721)
chr1 (19-135)||(18512233-18512347)
chr1 (46-103)||(51436601-51436658)
chr1 (19-135)||(51571236-51571350)
chr1 (33-101)||(44914496-44914564)
chr1 (33-104)||(23645490-23645561)
chr1 (33-104)||(51718547-51718618)
chr1 (19-104)||(14983840-14983923)
chr1 (19-104)||(48261207-48261290)
chr1 (33-86)||(33076199-33076252)
chr1 (34-87)||(48858904-48858957)
chr1 (35-135)||(8350089-8350188)
chr1 (35-131)||(10627704-10627800)
chr1 (37-135)||(26208120-26208221)
chr1 (33-84)||(29877377-29877428)
chr1 (35-82)||(30745068-30745115)
chr1 (35-82)||(30766519-30766566)
chr1 (29-84)||(49020346-49020401)
chr1 (35-132)||(8447817-8447914)
chr1 (33-135)||(15469947-15470048)
chr1 (70-135)||(48103252-48103318)
chr1 (33-87)||(48983605-48983659)
chr1 (42-135)||(2269462-2269555)
chr1 (35-104)||(4776837-4776906)
chr1 (35-84)||(30973634-30973683)
chr1 (47-108)||(44517878-44517939)
chr1 (35-131)||(3851239-3851335)
chr1 (22-89)||(8828057-8828122)
chr1 (33-133)||(29706595-29706694)
chr1 (56-131)||(37186948-37187023)
chr1 (19-55)||(42539474-42539510)
[»] chr4 (83 HSPs)
chr4 (19-135)||(39654889-39655005)
chr4 (35-135)||(38376380-38376480)
chr4 (33-135)||(39195136-39195238)
chr4 (33-135)||(39440563-39440665)
chr4 (35-135)||(2575680-2575780)
chr4 (33-133)||(37997333-37997433)
chr4 (22-109)||(39478505-39478592)
chr4 (33-135)||(43175063-43175165)
chr4 (33-134)||(42395928-42396029)
chr4 (33-133)||(27050978-27051078)
chr4 (35-135)||(29175306-29175406)
chr4 (35-134)||(19473847-19473946)
chr4 (52-135)||(34616659-34616742)
chr4 (35-133)||(11672015-11672113)
chr4 (33-135)||(42853656-42853758)
chr4 (33-134)||(11068767-11068868)
chr4 (22-134)||(24575742-24575852)
chr4 (35-135)||(26492088-26492188)
chr4 (35-135)||(44539815-44539915)
chr4 (35-135)||(53801649-53801749)
chr4 (33-104)||(40348873-40348944)
chr4 (33-135)||(26732304-26732406)
chr4 (37-135)||(31641455-31641553)
chr4 (22-134)||(10250406-10250516)
chr4 (34-135)||(56474657-56474758)
chr4 (47-135)||(21777459-21777547)
chr4 (52-135)||(38382419-38382502)
chr4 (52-135)||(47181939-47182022)
chr4 (52-135)||(48402087-48402170)
chr4 (22-135)||(7632351-7632462)
chr4 (37-135)||(21775232-21775330)
chr4 (37-135)||(36177989-36178087)
chr4 (33-135)||(37297128-37297229)
chr4 (34-88)||(50608561-50608615)
chr4 (33-135)||(50831645-50831747)
chr4 (53-135)||(56363935-56364017)
chr4 (35-127)||(10474010-10474102)
chr4 (35-135)||(23369222-23369322)
chr4 (35-135)||(26724862-26724962)
chr4 (43-134)||(46038752-46038841)
chr4 (52-135)||(515535-515618)
chr4 (33-84)||(31574880-31574931)
chr4 (19-135)||(1627445-1627562)
chr4 (22-135)||(50721634-50721745)
chr4 (33-135)||(51986121-51986223)
chr4 (39-128)||(35897786-35897874)
chr4 (35-135)||(5622539-5622639)
chr4 (35-119)||(32130145-32130229)
chr4 (37-129)||(38134436-38134528)
chr4 (39-98)||(2268434-2268493)
chr4 (71-144)||(3316471-3316546)
chr4 (33-87)||(38519873-38519927)
chr4 (33-87)||(51255826-51255880)
chr4 (35-83)||(52895309-52895358)
chr4 (35-83)||(12387607-12387655)
chr4 (55-95)||(39447848-39447888)
chr4 (36-135)||(39606049-39606153)
chr4 (33-84)||(193612-193663)
chr4 (33-88)||(46634179-46634234)
chr4 (35-135)||(47744402-47744502)
chr4 (33-87)||(5386452-5386506)
chr4 (33-63)||(16019556-16019586)
chr4 (71-133)||(19748752-19748814)
chr4 (71-133)||(19790992-19791054)
chr4 (35-65)||(24045324-24045354)
chr4 (70-135)||(38510663-38510726)
chr4 (19-92)||(41849758-41849830)
chr4 (38-92)||(49449096-49449150)
chr4 (74-135)||(5233560-5233621)
chr4 (35-84)||(15522436-15522485)
chr4 (22-55)||(27408223-27408256)
chr4 (42-135)||(31090593-31090686)
chr4 (19-83)||(35874844-35874906)
chr4 (35-88)||(40693561-40693614)
chr4 (35-84)||(47015087-47015136)
chr4 (33-62)||(52204930-52204959)
chr4 (33-65)||(336767-336799)
chr4 (33-65)||(9393845-9393877)
chr4 (39-135)||(15175631-15175727)
chr4 (22-65)||(19232093-19232134)
chr4 (52-104)||(31995836-31995888)
chr4 (35-135)||(46213051-46213151)
chr4 (33-65)||(50890033-50890065)
[»] chr7 (58 HSPs)
chr7 (33-135)||(24614206-24614308)
chr7 (33-135)||(31445397-31445499)
chr7 (19-135)||(40417841-40417955)
chr7 (22-135)||(41189431-41189544)
chr7 (33-135)||(35072252-35072354)
chr7 (19-135)||(48062124-48062238)
chr7 (19-132)||(4292495-4292607)
chr7 (33-135)||(35098593-35098695)
chr7 (22-135)||(38956508-38956619)
chr7 (35-134)||(35207582-35207679)
chr7 (68-135)||(9428530-9428597)
chr7 (35-102)||(30064520-30064587)
chr7 (52-135)||(46022157-46022240)
chr7 (33-135)||(41018743-41018845)
chr7 (35-84)||(36352525-36352574)
chr7 (35-135)||(25192807-25192907)
chr7 (19-135)||(35627910-35628024)
chr7 (35-135)||(43025421-43025521)
chr7 (35-135)||(47391215-47391315)
chr7 (52-135)||(7701642-7701725)
chr7 (22-104)||(22918090-22918170)
chr7 (31-98)||(38073297-38073364)
chr7 (22-108)||(44189227-44189311)
chr7 (22-104)||(44895493-44895573)
chr7 (37-135)||(39110948-39111044)
chr7 (32-134)||(42552976-42553078)
chr7 (35-135)||(38259143-38259244)
chr7 (70-135)||(38944913-38944978)
chr7 (35-84)||(41430092-41430141)
chr7 (35-116)||(41863538-41863619)
chr7 (22-135)||(41989630-41989743)
chr7 (35-132)||(44649221-44649318)
chr7 (33-136)||(10700075-10700177)
chr7 (22-84)||(35822915-35822975)
chr7 (37-135)||(3937013-3937111)
chr7 (33-87)||(12007123-12007177)
chr7 (35-89)||(22925220-22925274)
chr7 (29-87)||(29723862-29723920)
chr7 (31-65)||(30941467-30941501)
chr7 (22-135)||(40112844-40112955)
chr7 (51-135)||(6522163-6522250)
chr7 (35-135)||(38347625-38347726)
chr7 (35-84)||(42584884-42584933)
chr7 (35-135)||(1284495-1284595)
chr7 (35-135)||(32529746-32529846)
chr7 (34-78)||(34108805-34108849)
chr7 (33-135)||(3683611-3683713)
chr7 (33-64)||(32952411-32952442)
chr7 (22-84)||(34507146-34507206)
chr7 (22-84)||(40854595-40854655)
chr7 (68-135)||(43942746-43942813)
chr7 (33-135)||(46095030-46095134)
chr7 (22-135)||(43159465-43159575)
chr7 (23-84)||(19562287-19562348)
chr7 (33-98)||(38861175-38861240)
chr7 (54-106)||(11326001-11326053)
chr7 (19-62)||(24532905-24532946)
chr7 (53-137)||(32803788-32803872)
[»] scaffold0148 (1 HSPs)
scaffold0148 (19-135)||(20791-20905)
[»] scaffold0067 (1 HSPs)
scaffold0067 (22-98)||(35591-35667)
[»] scaffold0519 (1 HSPs)
scaffold0519 (33-135)||(11861-11963)
[»] scaffold0087 (2 HSPs)
scaffold0087 (33-135)||(53251-53353)
scaffold0087 (33-124)||(24439-24530)
[»] scaffold0199 (1 HSPs)
scaffold0199 (33-135)||(8747-8849)
[»] scaffold0056 (1 HSPs)
scaffold0056 (33-135)||(76509-76611)
[»] scaffold0098 (1 HSPs)
scaffold0098 (33-131)||(49374-49472)
[»] scaffold0041 (1 HSPs)
scaffold0041 (22-98)||(10890-10964)
[»] scaffold0002 (1 HSPs)
scaffold0002 (33-135)||(469526-469629)
[»] scaffold0662 (1 HSPs)
scaffold0662 (35-84)||(1226-1275)
[»] scaffold0618 (1 HSPs)
scaffold0618 (33-62)||(8915-8944)
[»] scaffold0257 (1 HSPs)
scaffold0257 (23-80)||(24041-24098)
[»] scaffold0343 (1 HSPs)
scaffold0343 (33-65)||(8919-8951)
[»] scaffold0034 (1 HSPs)
scaffold0034 (31-87)||(101837-101893)
[»] scaffold0019 (1 HSPs)
scaffold0019 (71-135)||(71478-71542)


Alignment Details
Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 136 - 284
Target Start/End: Complemental strand, 33045110 - 33044962
Alignment:
Q  136 atatatagagaagaatagagtgaatgatgatttatttattattcacactgattcaaatggtggtacaaatgtacaatagtta----tatagcccgtgatt 231  Q
    ||||| ||||||||||||||||||||| ||||||||    ||||||||||||| ||||||||||||||||||||||||||||    ||||||||||||||    
T  33045110 atatagagagaagaatagagtgaatgacgatttatt----attcacactgattgaaatggtggtacaaatgtacaatagttaattatatagcccgtgatt 33045015  T
Q  232 ttgagaacccaaacacaagacacaatcattcatatgctcaaggtttccctttg 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33045014 ttgagaacccaaacacaagacacaatcattcatatgctcaaggtttccctttg 33044962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 39054654 - 39054768
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||| ||||||||||  |    
T  39054654 atgtttttactttctc--tctctattgctttgatttttgtgcaaatatatcattttctttgcaaaattttgattatcacaaaagttgtcatctaaatgga 39054751  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  39054752 tgttcaaataacacaac 39054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 7552957 - 7552857
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||| ||| |||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||| ||||||||||  |||||||||||||||||    
T  7552957 tctctctactgcattgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaa 7552858  T
Q  135 c 135  Q
    |    
T  7552857 c 7552857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 2972393 - 2972504
Alignment:
Q  21 gtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatg 120  Q
    ||||||||||||||  |||||||||||||||||||||||||||||  |||||| ||| || ||||||||||| ||||||||||| |||  || |||||||    
T  2972393 gtttttactttctc--tctctattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatg 2972490  T
Q  121 ttcaaataacacaa 134  Q
    ||||||||||||||    
T  2972491 ttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 5168262 - 5168364
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||||||||||||||||| || ||  |||||||||||||||||||||  || ||||||||||| |||| || || ||||||||||||||||    
T  5168262 tctctctctattgctttgatttttgtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacac 5168361  T
Q  133 aac 135  Q
    |||    
T  5168362 aac 5168364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 39591759 - 39591861
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||| ||||||||| | ||||||||||||||||| |||| || ||||||| ||| |||| |||||| |||||||||||||||    
T  39591759 tctctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacac 39591858  T
Q  133 aac 135  Q
    |||    
T  39591859 aac 39591861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 39592151 - 39592253
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||| ||||||||| | ||||||||||||||||| |||| || ||||||| ||| |||| |||||| |||||||||||||||    
T  39592151 tctctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacac 39592250  T
Q  133 aac 135  Q
    |||    
T  39592251 aac 39592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 7287190 - 7287079
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  |||||||| |||| ||||||||||| ||  |||||||||||||||||||||| || ||||||||||| |||  || || |||||    
T  7287190 tttttactttctct--ctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgt 7287093  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  7287092 tcaaataacacaac 7287079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 13309950 - 13310063
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    |||||||||||||||||||||  | | ||||| ||||||||| ||||  ||||||||||||||||| ||||||| || ||||| || ||||||||||  |    
T  13309950 atgtttttactttctctctct--actactttggtttttgtgttaatacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatgga 13310047  T
Q  119 tgttcaaataacacaa 134  Q
    ||||||||||||||||    
T  13310048 tgttcaaataacacaa 13310063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 27487966 - 27488062
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataa 129  Q
    |||||||||||||||||| |||||||| |||||| | |||||||||||||||||||  ||||| ||||| |||||||  ||||| ||||||||||||    
T  27487966 tctctctctattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttatctcaaaaattatcataaaaatagatgttcaaataa 27488062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 33037601 - 33037701
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||||||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||||    
T  33037601 tctctctattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 33037700  T
Q  135 c 135  Q
    |    
T  33037701 c 33037701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 13168607 - 13168711
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaacata 138  Q
    |||||| ||||| |||||||| || ||| |||||| |||||||||||||||||| ||||||||||| |||  || || |||||| |||||||||||| ||    
T  13168607 tctattactttggtttttgtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaactta 13168706  T
Q  139 tatag 143  Q
    |||||    
T  13168707 tatag 13168711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 1671621 - 1671723
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| ||||||| |||| ||||||||||| ||  |||||| |||||||||||||||||| ||||||||||| |||  || ||  |||||||||||||||    
T  1671621 tctctttctattgttttggtttttgtgtcagtacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacac 1671720  T
Q  133 aac 135  Q
    |||    
T  1671721 aac 1671723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 26791245 - 26791134
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||    
T  26791245 tttttactttctct--ctctattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgt 26791148  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  26791147 tcaaataacacaac 26791134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 28306124 - 28306022
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| | |||||| || ||  |||||||||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||    
T  28306124 tctctctctattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 28306025  T
Q  133 aac 135  Q
    |||    
T  28306024 aac 28306022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 36739027 - 36739129
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||| ||  ||||||  |||||||||||||| || |||||||| ||||||  || ||  |||||||||||||||    
T  36739027 tctctctctattgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacac 36739126  T
Q  133 aac 135  Q
    |||    
T  36739127 aac 36739129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 7076569 - 7076464
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || || |||||    
T  7076569 tttttactttctct--ctctattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgt 7076472  T
Q  122 tcaaataa 129  Q
    ||||||||    
T  7076471 tcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 8686978 - 8687069
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||||| | | ||||||| |||  || || ||||||||||||||||    
T  8686978 tattgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacac 8687069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 14051316 - 14051232
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatca 108  Q
    ||||||||||||||  |||||||| |||| |||||||| || ||  |||||||||||||||||||||| || |||||||||||||||    
T  14051316 tttttactttctct--ctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatca 14051232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 17626084 - 17626167
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  17626084 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 17626167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 35634828 - 35634725
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttc-tttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    ||||||||||||| |||| |||||||| |||||  |||||||| |||||||||||||| |||||| ||||||| |||  || ||  ||||||||||||||    
T  35634828 tctctctctattgttttggtttttgtgccaataattcattttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataaca 35634729  T
Q  132 caac 135  Q
    ||||    
T  35634728 caac 35634725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 8097320 - 8097390
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgatt 92  Q
    |||||| ||| |||||||||||||||||||||||||||||||||  || |||||||| ||||||| |||||    
T  8097320 tttttattttttctctctctattgctttgatttttgtgtcaatacttctttttctttataaaattatgatt 8097390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 41321334 - 41321436
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||| ||||| ||||||||||||||  |||||| ||||||||||||||| || |||||||| || |||  || ||  || ||||||||||||    
T  41321334 tctctctctattactttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacac 41321433  T
Q  133 aac 135  Q
    |||    
T  41321434 aac 41321436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 1274438 - 1274538
Alignment:
Q  34 ctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    ||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||| ||  || ||||||| |||  || ||  ||||||||||||||||    
T  1274438 ctctctctattgctttggtttttgtgtcaatatctcattccctttgtaaaattttggtt-gcataaaagttgtcacatatatggatgttcaaataacaca 1274536  T
Q  134 ac 135  Q
    ||    
T  1274537 ac 1274538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 33958260 - 33958180
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||| || ||||||||||||| || || || ||| |||||||    
T  33958260 tttttactttctct--ctctattgctttggtttttgtgtcaatatctctttttctttgtaaatttatggttgtcataaaagtt 33958180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 1764303 - 1764405
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| |||||||||| ||||| || || ||  |||||| |||| |||||||||| || ||||||||||| |||  || || ||||||||||||||||    
T  1764303 tctctctttattgctttggtttttatgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacac 1764402  T
Q  133 aac 135  Q
    |||    
T  1764403 aac 1764405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 14923152 - 14923254
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||| || |||| |||||| |||  || ||  |||||||||||||||    
T  14923152 tctctctctattgctttggtttttgtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacac 14923251  T
Q  133 aac 135  Q
    |||    
T  14923252 aac 14923254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 15479548 - 15479650
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||| || || ||||||||  ||||||| ||||||||||||| ||| ||||||||||| |||  |  ||  |||||||||||||||    
T  15479548 tctctctctattgttttggttattttgtcaatacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacac 15479647  T
Q  133 aac 135  Q
    |||    
T  15479648 aac 15479650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 18660838 - 18660939
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| |||||  |||||| |||||||||| ||||||| | ||||||||||| |  || || ||||||| ||||| ||    
T  18660838 tctctctctattgctttggtttttgtgccaatacttcatttcctttgtaaaagtttgattgt-acaaaagttatgacatatatgaatgttcgaataatac 18660936  T
Q  133 aac 135  Q
    |||    
T  18660937 aac 18660939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 22972196 - 22972298
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||| ||||||| | ||||  | |||||||||||||||||||  || || |||||||| | || |||||  |||||||||||||||    
T  22972196 tctctctctattgttttggtttttgtattaataccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacac 22972295  T
Q  133 aac 135  Q
    |||    
T  22972296 aac 22972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 18258783 - 18258683
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||| |||| ||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||||    
T  18258783 tctctatatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 18258684  T
Q  135 c 135  Q
    |    
T  18258683 c 18258683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 21156067 - 21156169
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| |||||||||||| |||||||| ||||   | |||||||||||||||||||| || |  |||  |||||||| ||||   |||||||||||||||    
T  21156067 tctctttctattgctttggtttttgtgccaatcacttattttctttgtaaaattttgtttgttgcaagggttatcatataaaatgatgttcaaataacac 21156166  T
Q  133 aac 135  Q
    |||    
T  21156167 aac 21156169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 21943687 - 21943637
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    ||||||| |||||||||||||||| ||||||||| | ||||||||||||||    
T  21943687 tctctctttattgctttgatttttctgtcaatatcttattttctttgtaaa 21943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 6596412 - 6596460
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||||||||||| ||||||||| ||||  ||||||||||||||||    
T  6596412 tctctctattgctttggtttttgtgttaatacctcattttctttgtaaa 6596460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 19844300 - 19844200
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| ||| |||| |||||  || |||||||||||||||| || || ||  |||| ||||||   |||||  ||||||||||||||||    
T  19844300 tctctctattgctttggtttgtgtgccaatacctctttttctttgtaaaattatggttgtcttaaaaattatcaatcaaatatttgttcaaataacacaa 19844201  T
Q  135 c 135  Q
    |    
T  19844200 c 19844200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 2429106 - 2429157
Alignment:
Q  53 ttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||||| |||||||||||||||| | ||| || ||||||||    
T  2429106 ttttgtgtcaatatatctttttctttgtaaaattataattgtctcaaaagtt 2429157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 4719718 - 4719786
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 89  Q
    ||||||||||||| ||||  ||||||||||||||||||||| |||||  |  ||||||||| |||||||||    
T  4719718 atgtttttactttttctc--tctattgctttgatttttgtgccaatactttcttttctttgcaaaattttg 4719786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 27546134 - 27546245
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    |||||||||| | ||||| | |||||||||||||| ||||||||| |  ||||||||||| | || ||||| || |||||||| |||   |||||  | |    
T  27546134 tttttactttatatctctattttgctttgatttttatgtcaatatctatttttctttgtacatttatgattgtctcaaaagttgtcacacaaatagttat 27546233  T
Q  122 tcaaataacaca 133  Q
    ||||||||||||    
T  27546234 tcaaataacaca 27546245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 33599030 - 33599137
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||| |||||||  |||||||| ||||| |||||||||| || ||||||||||||| || |  || ||| |||| ||||||| |||||       
T  33599030 atgtttttactttttctctct--attgctttaatttt-gtgtcaatatctctttttctttgtaaatttatagttgtcataaaaattatcatataaatggt 33599126  T
Q  119 tgttcaaataa 129  Q
    |||||||||||    
T  33599127 tgttcaaataa 33599137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 35646462 - 35646517
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 88  Q
    ||||||| |||||||||| ||||||||||| ||  |||||| ||||||||||||||    
T  35646462 tctctctatattgctttggtttttgtgtcactacctcatttcctttgtaaaatttt 35646517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 41699533 - 41699584
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||  ||||||||| ||||||||| || |||||||||||||||    
T  41699533 tctctctctattaatttgattttcgtgtcaatacataattttctttgtaaaa 41699584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 28467445 - 28467343
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||| |||||||| |||| ||||||||||| |   |||||| |||| |||||||||| || |||||||| || |||  || || |||||||| |||||||    
T  28467445 tctcactctattgttttggtttttgtgtcactgcctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacac 28467346  T
Q  133 aac 135  Q
    |||    
T  28467345 aac 28467343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 1079936 - 1079879
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||||||  ||||||| |||||  ||||||||||||||||||||| ||| |||||    
T  1079936 tattgctttggattttgtgccaatacctcattttctttgtaaaattttaattgtcaca 1079879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 6758780 - 6758731
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||||||| |||| ||||||||| || |||||||||| ||||    
T  6758780 tctctctattgctttggttttcgtgtcaatacatgattttctttgaaaaa 6758731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 19522004 - 19521966
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtca 62  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  19522004 tttttactttctct--ctctattgctttgatttttgtgtca 19521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 21353225 - 21353294
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    |||||||||| ||||  ||||||||| |||| ||| |||||||||||||||| || || || ||||||||    
T  21353225 tctctctattactttagtttttgtgttaatacatctttttctttgtaaaattatggttgtcccaaaagtt 21353294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 35567580 - 35567633
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatt 86  Q
    ||||||||||||||||||| ||||||||||| |  | ||||| |||||||||||    
T  35567580 tctctctctattgctttgaattttgtgtcaaaaccttattttatttgtaaaatt 35567633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 42478144 - 42478075
Alignment:
Q  71 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaacatata 140  Q
    |||| ||||||||||| ||||| || ||||||||||||   ||||||||||| |||||||| ||| ||||    
T  42478144 ttttttttgtaaaattatgattgtcgcaaaagttatcaatcaaataaatgtttaaataacataacttata 42478075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 13089771 - 13089719
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    |||||||||||||||||||||||||||| ||  | | |||||||||| |||||    
T  13089771 tctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 13089719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 20270650 - 20270698
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    ||||| ||||| |||||||| ||||||||||  ||||||||||||||||    
T  20270650 tctctttattgttttgatttatgtgtcaatacctcattttctttgtaaa 20270698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 24468265 - 24468201
Alignment:
Q  51 atttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaat 115  Q
    ||||||||||||||||||| ||||||  ||||| || || |||||| ||||||| ||| ||||||    
T  24468265 atttttgtgtcaatatatctttttctcagtaaatttatggttatcataaaagttttcacctaaat 24468201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 25561007 - 25560908
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||| ||||||| | ||||||||||||||| || |||||||| ||||||| || || || ||||| ||||||  ||||||  | ||||||||| ||||    
T  25561007 tctctccattgcttcggtttttgtgtcaatatctc-ttttctttataaaattatggttgtcccaaaaattatcaattaaatagttattcaaataatacaa 25560909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 29463075 - 29463107
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaata 65  Q
    ||||||||||||||||||||||||||| |||||    
T  29463075 tctctctctattgctttgatttttgtgccaata 29463107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 37133866 - 37133752
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||  |    
T  37133866 atgtttttactttctctttct--attgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatgga 37133769  T
Q  119 tgttcaaataacacaac 135  Q
    |||| ||||||||||||    
T  37133768 tgttaaaataacacaac 37133752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 36816606 - 36816507
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||| |||  || ||| |||||||||||||||||    
T  36816606 tctctctattgctttgatttttgtgttaatacgtcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 29025339 - 29025441
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| || || |||||||| |||| |||||  ||||| |||||||||    
T  29025339 tctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacac 29025438  T
Q  133 aac 135  Q
    |||    
T  29025439 aac 29025441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 10902772 - 10902880
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||| |||||||||||||||||||||      |||||||| || ||||||||||  |    
T  10902772 atgtttttactttctc--tctctattgctttgatttttgtgccaatacatcattttctttgtaaaattt------tcacaaaaattgtcatctaaatgga 10902863  T
Q  119 tgttcaaataacacaac 135  Q
    | |||||||||||||||    
T  10902864 tattcaaataacacaac 10902880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 11253534 - 11253432
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| |  ||||||||||| |||| |  ||| |||||||||||| ||    
T  11253534 tctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatac 11253435  T
Q  133 aac 135  Q
    |||    
T  11253434 aac 11253432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 36660451 - 36660340
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| || |||||||||||  ||||||||||| ||||||||||||| |||||||||||||||  |  ||  ||||    
T  36660451 tttttactttctct--ctctattgctttggttattgtgtcaatacttcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgt 36660354  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  36660353 tcaaataacacaac 36660340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 27854758 - 27854661
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||| ||||||||||||| |||||| | ||||||||||||||||||| ||| ||  ||||||||||||  |||| ||||||||||||||||    
T  27854758 tctctctattgttttgatttttgtgccaatatttaattttctttgtaaaattttaattgtcttaaaagttatcatgaaaatgaatgttcaaataacac 27854661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 4054287 - 4054176
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||  |||| |||||||||| ||||||||||| ||  ||||||  |||||||| |||||||| ||||||||||| |||  || ||||||||    
T  4054287 tttttactttct--ctctttattgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgt 4054190  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  4054189 tcaaataacacaac 4054176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 27325837 - 27325939
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| || ||  |||||| ||||||||||||||||||||||| |||||| |||  || ||  |||||||||||||||    
T  27325837 tctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacac 27325936  T
Q  133 aac 135  Q
    |||    
T  27325937 aac 27325939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 10731625 - 10731690
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||| |||||    
T  10731625 tctctctctattgctttgatttttgtgtcaatacttcatttcctttgtaaaattttgattgtcaca 10731690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 10839486 - 10839375
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||| |||  ||||||||| |||||||| |||||| | |||||||||||||||||||  || || ||||| |||||||  ||||  |    
T  10839486 atgtttttactttctctatct--attgctttggtttttgtgccaatatttaattttctttgtaaaattttagttgtctcaaaaattatcataaaaatgga 10839389  T
Q  119 tgttcaaataacac 132  Q
    ||||||||||||||    
T  10839388 tgttcaaataacac 10839375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 22719519 - 22719621
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||  | ||  |||||||||||||||||||||| |||||||||||||| |||  || ||   ||||||||||||||    
T  22719519 tctctctctattgctttggtttttgtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacac 22719618  T
Q  133 aac 135  Q
    |||    
T  22719619 aac 22719621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 34639612 - 34639710
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||||| ||||| || |||||||| ||  ||||||| ||||||||||||||||| || ||||| ||||||| |||||  ||||||||||||||    
T  34639612 tctctctctattactttggttattgtgtcactacctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataaca 34639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 37449413 - 37449315
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||| ||||||||  | ||  |||||| ||||||||||||||||||||||||||||||||||  || ||  || |||||||||||||||    
T  37449413 tctctattgctttggtttttgtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaac 37449315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 39856117 - 39856219
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||||||||||||||||||| |  |||||||||| || |  ||||| ||  ||||||||||||  |||||  ||||||||||||||    
T  39856117 tctctctctattgctttgatttttgtgtcaatatctatttttctttgttaattcatgattgtcttaaaagttatcattaaaatagttgttcaaataacac 39856216  T
Q  133 aac 135  Q
    |||    
T  39856217 aac 39856219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 41639800 - 41639738
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||    
T  41639800 tttttactttctctctctctattgctttgatttttgtgtcaacacatacttttctttgtaaaa 41639738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 24479323 - 24479404
Alignment:
Q  54 tttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||| |||||| ||||||||||||||  || |||||||||||||||| || || |||| ||||||||||||||    
T  24479323 tttgtgtcaatatctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaac 24479404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 134
Target Start/End: Complemental strand, 32501188 - 32501087
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||| ||||||||||||||||| ||  |||||| ||||||||||||||| || |||||||| || |||  || ||  |||||||||||||||    
T  32501188 tctctctctattactttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacac 32501089  T
Q  133 aa 134  Q
    ||    
T  32501088 aa 32501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 7271928 - 7272000
Alignment:
Q  32 ctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||  |||| |||||||||||| |||||||||||    
T  7271928 ctctctctctattgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgtcacaaaagtt 7272000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 45405611 - 45405662
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  45405611 tctctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaa 45405662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 13106559 - 13106661
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||||||  || ||||||||||||| || || || | | ||||||| ||| ||||||   ||||||||||||||    
T  13106559 tctctctctattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgttcaaataacac 13106658  T
Q  133 aac 135  Q
    |||    
T  13106659 aac 13106661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 34186686 - 34186788
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||| ||||| ||||||||||| ||  |||||| ||||| |||||||||||| ||||||||||| |||  |  ||  |||||||||||||||    
T  34186686 tctctctctattactttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacac 34186785  T
Q  133 aac 135  Q
    |||    
T  34186786 aac 34186788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 32020469 - 32020420
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatat 68  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  32020469 atgtttttactttctctctcgctattgctttgattttcgtgtcaatatat 32020420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 12898919 - 12898823
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||||||||| |||||| | || ||| |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||    
T  12898919 tctctctattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 12898823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 23754696 - 23754596
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||| |||||| |||| |||||||||||||   |||||||||||||||||||||| || |  |||| ||| |||| ||||  ||||||||||||||||||    
T  23754696 tctcactattgttttggtttttgtgtcaatcactcattttctttgtaaaattttggttgttgcaaaggttgtcatataaaataatgttcaaataacacaa 23754597  T
Q  135 c 135  Q
    |    
T  23754596 c 23754596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 42768285 - 42768385
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| ||||||||||| |   |||||| ||||||||||||||  || |||||||| ||||||  || ||  |||||||||||||||||    
T  42768285 tctctctattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaa 42768384  T
Q  135 c 135  Q
    |    
T  42768385 c 42768385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 32133425 - 32133504
Alignment:
Q  56 tgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||  | ||||| |||||||||||||| ||||| ||||| ||||||| |||||  ||||||||||||||||||    
T  32133425 tgtgtcaataccttattttatttgtaaaattttggttatctcaaaatttatcatataaatggatgttcaaataacacaac 32133504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 36251406 - 36251503
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||||| ||||| |||| |||||| ||  |||||| |||||||||||||||||| |||| ||||||||||  || ||  ||||||||||||||    
T  36251406 tctctctctattactttggtttt-gtgtcactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 2883265 - 2883322
Alignment:
Q  31 tctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 88  Q
    ||||||||||| ||| |||||||||||||| ||||  |||||||||||||||||||||    
T  2883265 tctctctctcttttgttttgatttttgtgttaatacttcattttctttgtaaaatttt 2883322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 43397860 - 43397929
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaag 102  Q
    ||||| |||||| ||||| |||||||| || ||| |||||||||||||||||||||| || |||||||||    
T  43397860 tctctttctattactttggtttttgtgccactatctcattttctttgtaaaattttggttgtcacaaaag 43397929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 6440152 - 6440212
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||||||| |||  |||||||||||||||||||||| ||  ||||||||||||||    
T  6440152 tttttactttctctctttct--tgctttgatttttgtgtcaatacatacttttctttgtaaaa 6440212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 42786660 - 42786597
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaat 85  Q
    |||||||||| ||||||||| || |||||||||||||| ||||| ||  |||||||||||||||    
T  42786660 tttttactttttctctctctctttctttgatttttgtgccaatacatatttttctttgtaaaat 42786597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 44415760 - 44415867
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    |||||||||||||||||||||||| |||| ||| |||  |||||| | ||||||||  |||||||||  || || |||||||| ||||  ||||  ||||    
T  44415760 tttttactttctctctctctattgttttggtttctgtaccaatatttaattttcttcataaaattttagttgtctcaaaagttgtcatgaaaattgatgt 44415859  T
Q  122 tcaaataa 129  Q
    ||||||||    
T  44415860 tcaaataa 44415867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 5277500 - 5277426
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||||||||||  |||||||||||   ||||||||||| ||  |||||| |||||||||||||||||| |||||    
T  5277500 tttttactttctct--ctctattgcttaagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcaca 5277426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 33100460 - 33100411
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||| |||||||||||||||||||| ||  ||||||||||||||    
T  33100460 tctctctattactttgatttttgtgtcaatacatacttttctttgtaaaa 33100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 5740789 - 5740724
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatt 86  Q
    |||||||||||||||||||||  |||| |||| |||||||||| |||  || ||||||||||||||||    
T  5740789 atgtttttactttctctctct--attgttttggtttttgtgtcgatacctctttttctttgtaaaatt 5740724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 44976990 - 44976894
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatca-ttttctttgtaaaattttgattatc-acaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||| ||||| |||||||||||||| ||| |||||||| ||||||||||||| || | |||| ||||||| ||| ||| | ||||||||| |||||    
T  44976990 tattgttttgaattttgtgtcaatatttcatttttctttataaaattttgattgtctaaaaaaattatcatataagtaattattcaaataatacaac 44976894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 43632327 - 43632280
Alignment:
Q  36 ctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    ||||||||||||||| ||||||||||||||  ||||||| ||||||||    
T  43632327 ctctctattgctttggtttttgtgtcaatacctcattttatttgtaaa 43632280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 144246 - 144172
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcat 109  Q
    ||||||||||| |||| || || ||| ||||| | |||||||||||||| || || ||||||||||| |||||||    
T  144246 tctctctattgttttggttcttttgttaatatctgattttctttgtaaatttatggttatcacaaaaattatcat 144172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 5600978 - 5600924
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    ||||||| ||||||||||||||||||||||  || | | ||||||||||||||||    
T  5600978 tctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5600924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 5639642 - 5639696
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    ||||||| ||||||||||||||||||||||  || | | ||||||||||||||||    
T  5639642 tctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5639696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 7598796 - 7598889
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||| |||| ||||| ||||||||  | ||||||| |||||| ||||| || || |||||||| |||| ||| | |||||||||||||||||||    
T  7598796 tattgttttggtttttatgtcaataccttattttctatgtaaa-ttttggttgtctcaaaagttttcatataattgaatgttcaaataacacaac 7598889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 12735001 - 12734903
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    ||||| |||| ||||||||||||||||||||  |  ||||| ||||||| ||||  || ||||| || |||||||  |||| | |||||||||||||||    
T  12735001 tctctatattactttgatttttgtgtcaatacctacttttcattgtaaatttttagttgtcacataaattatcatacaaattattgttcaaataacaca 12734903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 42619971 - 42619921
Alignment:
Q  34 ctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||||||||||||||||| ||| | ||  ||||||||||||||    
T  42619971 ctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaa 42619921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 44064437 - 44064467
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaa 63  Q
    |||||||||||||||||||||||||||||||    
T  44064437 tctctctctattgctttgatttttgtgtcaa 44064467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 67150 - 67101
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||| ||||||| |||||| ||||| || |||||||||||||||    
T  67150 tctctctattactttgatatttgtgccaatacatgattttctttgtaaaa 67101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 3413178 - 3413133
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||| |||||||| ||||| || |||||||||||||||    
T  3413178 tctattgctttggtttttgtgccaatacatgattttctttgtaaaa 3413133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 8671545 - 8671496
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||| ||||||||||||| |||||||||  |||| |||||||||    
T  8671545 tctctctattactttgatttttgtatcaatatatttttttttttgtaaaa 8671496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 31249525 - 31249451
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||||||||||  ||||||||||||| |||||||  || ||  |||||| ||||||||||||||| || |||||    
T  31249525 tttttactttctct--ctctattgctttggtttttgtaccactacctcatttcctttgtaaaattttggttgtcaca 31249451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 44090966 - 44090995
Alignment:
Q  33 tctctctctattgctttgatttttgtgtca 62  Q
    ||||||||||||||||||||||||||||||    
T  44090966 tctctctctattgctttgatttttgtgtca 44090995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 10592284 - 10592243
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtca 62  Q
    |||||||||||||||||||||  ||||||||| |||||||||||    
T  10592284 atgtttttactttctctctct--attgctttggtttttgtgtca 10592243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 25987776 - 25987724
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    |||||||||||||||||||||||||||| ||  | | |||||||||| |||||    
T  25987776 tctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 25987724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 34694861 - 34694909
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||||||||||||||||  ||||||||  | ||||||||||||||    
T  34694861 tctctctattgctttgattttcatgtcaatacctaattttctttgtaaa 34694909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 40517343 - 40517387
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    ||||||||||||||||| |||||||||| |  |||||||||||||    
T  40517343 tctattgctttgattttcgtgtcaatatctacttttctttgtaaa 40517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 27490722 - 27490620
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| ||||  |||||||||||||||    
T  27490722 tctctctctattgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacac 27490623  T
Q  133 aac 135  Q
    |||    
T  27490622 aac 27490620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 8848687 - 8848587
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||||||||||||    
T  8848687 tctctctattgctttgatttttgtaccaatacatcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaa 8848588  T
Q  135 c 135  Q
    |    
T  8848587 c 8848587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 41195663 - 41195765
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| || ||||||||||| | |  || || ||||||||||||||||    
T  41195663 tctctctctattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacac 41195762  T
Q  133 aac 135  Q
    |||    
T  41195763 aac 41195765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 37737965 - 37737861
Alignment:
Q  31 tctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataac 130  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| || ||||||||||| |||  || ||  | |||||||||||    
T  37737965 tctctctctctattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataac 37737866  T
Q  131 acaac 135  Q
    |||||    
T  37737865 acaac 37737861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 2076648 - 2076750
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||| |||  |  ||  |||||||||||||||    
T  2076648 tctctttctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacac 2076747  T
Q  133 aac 135  Q
    |||    
T  2076748 aac 2076750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 3838881 - 3838770
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  |||||||| |||||||||||||||| |   |||||| |||||||||||||| ||||||||||||||| |||  || ||| ||||    
T  3838881 tttttactttctct--ctctattgttttgatttttgtgtcactgcttcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgt 3838784  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  3838783 tcaaataacacaac 3838770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 9647211 - 9647313
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||||||   || || ||||||||||||||||    
T  9647211 tctctctctattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacac 9647310  T
Q  133 aac 135  Q
    |||    
T  9647311 aac 9647313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 18846678 - 18846788
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||  |||||||| |||||||||||||  ||||| |||||||| |||| |||||||||||| ||| |||| || ||||||||||  |    
T  18846678 atgtttttactttctc--tctctattactttgatttttgtaccaatacatcattttttttgcaaaattttgattgtcataaaaattgtcatctaaatgga 18846775  T
Q  119 tgttcaaataaca 131  Q
    |||||||||||||    
T  18846776 tgttcaaataaca 18846788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 9207669 - 9207777
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || |||||||| ||||||  || ||| |||||||||||||||    
T  9207669 tctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacac 9207768  T
Q  133 aacatatat 141  Q
    ||| |||||    
T  9207769 aacttatat 9207777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 22888822 - 22888707
Alignment:
Q  22 tttttactttctctctctct--attgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaat 119  Q
    ||||||||||| ||||||||  ||||||||| |||||||| |||||  |||||| |||||||||||||||||| ||||||||||| |||  || ||  ||    
T  22888822 tttttactttcactctctctttattgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggat 22888723  T
Q  120 gttcaaataacacaac 135  Q
    ||||||||||||||||    
T  22888722 gttcaaataacacaac 22888707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 29349587 - 29349683
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    ||||||| || |||||||||||||| | ||| || ||||||||||||||||||||||| ||||||||||| ||||||||||  ||||| ||||||||    
T  29349587 tctctctgttactttgatttttgtgccgatacattattttctttgtaaaattttgattgtcacaaaagttgtcatctaaatggatgttgaaataaca 29349683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 18254210 - 18254099
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||| |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||    
T  18254210 tttttactttctct--ctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgt 18254113  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  18254112 tcaaataacacaac 18254099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 1248767 - 1248867
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| |||||||| || ||  |||||| |||||||||||||| ||||||||||||||| |||  || ||  |||||||||||||||||    
T  1248767 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaa 1248866  T
Q  135 c 135  Q
    |    
T  1248867 c 1248867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 19642677 - 19642777
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||||||||||||||||||||||   |||||||||||| |||||| || || || |||||||| |||| |||||  ||||| |||||||||    
T  19642677 tctctctctattgctttgatttttgtgtcaatgcttcattttctttgcaaaattgtggttgtctcaaaagttctcatataaatggatgtttaaataacac 19642776  T
Q  133 a 133  Q
    |    
T  19642777 a 19642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 6049335 - 6049236
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||| |||||||| |||||||| |||||  |||||| |||||||||||||||||| ||||||||||| |||  || ||  |||||||||||||||||    
T  6049335 tctctctcttgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 13333143 - 13333060
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||| |||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  13333143 tttttgtgtcaatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaac 13333060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 19633365 - 19633464
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatc-taaataaatgttcaaataacacaac 135  Q
    ||||| |||||||| ||||||| ||| ||  |||||| |||||||||||||||||| ||||||||||||||| | || |||||||||||||||| |||||    
T  19633365 tctctgttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaac 19633464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 19830266 - 19830365
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatc-taaataaatgttcaaataacacaac 135  Q
    ||||| |||||||| ||||||| ||| ||  |||||| |||||||||||||||||| ||||||||||||||| | || |||||||||||||||| |||||    
T  19830266 tctctgttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaac 19830365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 7698250 - 7698352
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| ||||||||||||||||||||| || ||  | |||| |||||||||||||| |||||||||||||||||||  |  ||| |||||| ||||||||    
T  7698250 tctctttctattgctttgatttttgtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacac 7698349  T
Q  133 aac 135  Q
    |||    
T  7698350 aac 7698352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 9990770 - 9990872
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||  || ||  |||||| |||||||||||||| ||| |||||||||||||||  || ||  |||||||||||||||    
T  9990770 tctctctctattgctttggtttttgtaccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacac 9990869  T
Q  133 aac 135  Q
    |||    
T  9990870 aac 9990872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 32477411 - 32477513
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| |||||||||||||||||| | ||||  |||||| |||||| |||||||| || ||||||||||| |||  || || ||||||||||||||||    
T  32477411 tctctctatattgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacac 32477510  T
Q  133 aac 135  Q
    |||    
T  32477511 aac 32477513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 1907767 - 1907653
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||    | ||||||||||||| || || || ||| | ||||| |||||||||| |     
T  1907767 atgtttttactttctctctct--attgttttgatttttgtgtcaattccgctttttctttgtaaatttatggttgtcatacaagttgtcatctaaatgat 1907670  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  1907669 tgttcaaataacacaac 1907653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 44654704 - 44654805
Alignment:
Q  34 ctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    |||||||||||| ||||||||||||||| || | ||||||||||| |||||||||  || ||  |||||||||||| ||||| | | |||||||||||||    
T  44654704 ctctctctattgttttgatttttgtgtcgatttctcattttctttataaaattttagttgtcttaaaagttatcatataaattatttttcaaataacaca 44654803  T
Q  134 ac 135  Q
    ||    
T  44654804 ac 44654805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 41056720 - 41056637
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  41056720 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 41056637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 7664067 - 7663957
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||  || ||||||||||||| || || || ||| |||| || ||| |||||| | |||    
T  7664067 tttttactttctct--ctctattgctttggtttttgtgtcaatacctctttttctttgtaaatttatggttgtcataaaa-ttgtcacctaaatgattgt 7663971  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  7663970 tcaaataacacaac 7663957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 3097834 - 3097751
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||| ||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  3097834 tttttgtgtaaataactcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 3097751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 25270555 - 25270472
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || | |||||| |||| |||||  ||||||||||||||||||    
T  25270555 tttttgtgtcaatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaac 25270472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 39147833 - 39147945
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||| | |  |||| |||||||||||||||||||  ||||||| |||||||| || ||||| || |||||||| ||||  ||||       
T  39147833 atgtttttactttctctttgt--attgttttgatttttgtgtcaatacctcattttttttgtaaatttatgattgtcccaaaagttgtcattaaaatggt 39147930  T
Q  119 tgttcaaataacaca 133  Q
    |||||||||||||||    
T  39147931 tgttcaaataacaca 39147945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 16011511 - 16011613
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||| |||||||| ||||||| |||||||| ||| || |||| |||||||||||||  || || ||| ||||||||   |||||| ||||||||||||||    
T  16011511 tctcactctattgttttgattcttgtgtcactatctctttttttttgtaaaattttagttgtctcaagagttatcaatcaaataattgttcaaataacac 16011610  T
Q  133 aac 135  Q
    |||    
T  16011611 aac 16011613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 33616536 - 33616598
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||||||||||||||||||||||||||||  ||| | ||  ||||||||||||||    
T  33616536 tttttactttctctctctctattgctttgatttttgtaccaacacatacttttctttgtaaaa 33616598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 34945091 - 34944980
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  |||||||||||||||||||||| || ||  ||||||  |||||||||||||| || |||| |||||| |||  || || ||| |    
T  34945091 tttttactttctct--ctctattgctttgatttttgtgccactacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatat 34944994  T
Q  122 tcaaataacacaac 135  Q
    |||| |||||||||    
T  34944993 tcaattaacacaac 34944980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 41042333 - 41042431
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||||||||||| ||||| ||||||||| |||||| |||| |||||||||| || ||| |||| || |||  || ||  ||||||||||||||    
T  41042333 tctctctctattgctttggtttttatgtcaatatctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataaca 41042431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 42421899 - 42421788
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||  |||| |||||||||| | |||||| || ||  |||||| |||| |||||||||| || ||||||||||| |||  || || |||||    
T  42421899 tttttactttct--ctctttattgctttggtgtttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgt 42421802  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  42421801 tcaaataacacaac 42421788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 43487462 - 43487560
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || | |||||| || |||  || ||  ||||||||||||||||||    
T  43487462 tctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaac 43487560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 10216917 - 10216991
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatc 95  Q
    ||||||||||||||||  |||||||||||| | ||||||||||||||  |  |||||||||||||||| ||||||||    
T  10216917 atgtttttactttctc--tctctattgcttcggtttttgtgtcaatacctttttttctttgtaaaattatgattatc 10216991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 42091493 - 42091393
Alignment:
Q  36 ctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttat--catctaaataaatgttcaaataacaca 133  Q
    ||||||||||||||| ||||||||||| ||  || ||| ||||||||||||||| || |||||||| || |  ||| || ||| ||||||||||||||||    
T  42091493 ctctctattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaataacaca 42091394  T
Q  134 a 134  Q
    |    
T  42091393 a 42091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 44977503 - 44977441
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||   |||||||||||||||    
T  44977503 atgtttttactttctctctct--attgctttggtttttgtgtcaataccccattttctttgtaaa 44977441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 12070927 - 12070978
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||| ||||||||||||||||| ||||||||| || |||||||||||||||    
T  12070927 tctctttctattgctttgattttcgtgtcaatacatgattttctttgtaaaa 12070978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 9194320 - 9194422
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||| |||||||| || ||  ||||||  |||||||||||||| || |||||||| || | |  || || ||||||||||||||||    
T  9194320 tctctctctattgttttggtttttgtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacac 9194419  T
Q  133 aac 135  Q
    |||    
T  9194420 aac 9194422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 9760097 - 9760199
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||   ||||||| || ||  |||||| ||| | ||||||||| || ||||||||||| |||  || ||| |||||||||||||||    
T  9760097 tctctctctattgctttagattttgtgccactacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacac 9760196  T
Q  133 aac 135  Q
    |||    
T  9760197 aac 9760199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 12784399 - 12784337
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||||||||||| ||||||||||| || ||||  ||  ||||||||||||||    
T  12784399 tttttactttctctctctctattactttgatttttatgccaatgcatatttttctttgtaaaa 12784337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 42821451 - 42821500
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||||||    
T  42821451 tctctctttattgctt-gatttttgtgtcaatacatcattttctttgtaaa 42821500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 6511330 - 6511395
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||| |||||||||||| ||||||||||| ||  |||||| |||| ||||||||||||| |||||    
T  6511330 tctctttctattgctttggtttttgtgtcactacctcatttcctttataaaattttgattgtcaca 6511395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 22416292 - 22416357
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    |||||||||||||||||| |||||||| || |   |||||||||||||||||||||| || |||||    
T  22416292 tctctctctattgctttggtttttgtgccactgcctcattttctttgtaaaattttggttgtcaca 22416357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 22446020 - 22445967
Alignment:
Q  29 tttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaa 82  Q
    ||||||| ||||||||||||| |||||||||||||||  |||||| ||||||||    
T  22446020 tttctctttctctattgctttaatttttgtgtcaatacctcatttcctttgtaa 22445967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 31414990 - 31415091
Alignment:
Q  34 ctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    |||||||| |||| ||| ||||||||||||||| ||  ||||||| ||||||| || || || ||||||||||||   |||| | ||||||||||| |||    
T  31414990 ctctctctgttgcattggtttttgtgtcaatatctctctttctttttaaaattatggttgtctcaaaagttatcaataaaatgattgttcaaataataca 31415089  T
Q  134 ac 135  Q
    ||    
T  31415090 ac 31415091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 1352472 - 1352523
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 88  Q
    |||||||||||||| |||||||| ||||   |||||||||||||||||||||    
T  1352472 tctctattgctttggtttttgtgccaatcactcattttctttgtaaaatttt 1352523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 14328461 - 14328512
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||| ||||||||||||| ||||||||| || |||||||| ||||||    
T  14328461 tctctctctgttgctttgattttcgtgtcaatacatgattttcttagtaaaa 14328512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 19843564 - 19843615
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||||||||||||||| ||| | ||  ||||||||||||||    
T  19843564 tctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaa 19843615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 36587463 - 36587408
Alignment:
Q  32 ctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    |||||||||||||||||||||||||||| || ||| | | |||||||||| |||||    
T  36587463 ctctctctctattgctttgatttttgtgccactatctaaatttctttgtataattt 36587408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 10521343 - 10521309
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattt 73  Q
    ||||||||||||||||||||||| |||||||||||    
T  10521343 tctattgctttgatttttgtgtctatatatcattt 10521309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 14871718 - 14871748
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaa 63  Q
    |||||||||||||||||||||||||||||||    
T  14871718 tctctctctattgctttgatttttgtgtcaa 14871748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 7258553 - 7258500
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatt 86  Q
    |||||||||||||||||||||||| |||||| |  || |||||||| |||||||    
T  7258553 tctctctctattgctttgatttttatgtcaagacctctttttctttataaaatt 7258500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 16973746 - 16973697
Alignment:
Q  40 ctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 89  Q
    ||||| |||||||||||| |||||| | ||||||| ||||||||||||||    
T  16973746 ctattactttgatttttgggtcaatttctcattttatttgtaaaattttg 16973697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 33273560 - 33273523
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttg 89  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  33273560 tttttgtgtcaatatctcattttctttataaaattttg 33273523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 42434247 - 42434300
Alignment:
Q  82 aaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||  || |||||||| |||| |||||| ||||||||||||||||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaac 42434300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 43075964 - 43076064
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatc-attttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    |||||||| || |||||||||||||||||||  || ||||| ||| |||||||||| || || | ||||||||||| |||||   | |||||||||||||    
T  43075964 tctctctactgttttgatttttgtgtcaatacttcaattttttttataaaattttggttgtctc-aaagttatcatataaattgttattcaaataacaca 43076062  T
Q  134 ac 135  Q
    ||    
T  43076063 ac 43076064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 7667204 - 7667240
Alignment:
Q  47 tttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||||||||||||||| | ||||||||||||||    
T  7667204 tttgatttttgtgtcaatatttaattttctttgtaaa 7667240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 14876794 - 14876826
Alignment:
Q  31 tctctctctctattgctttgatttttgtgtcaa 63  Q
    ||||||||||||||| |||||||||||||||||    
T  14876794 tctctctctctattgttttgatttttgtgtcaa 14876826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 17768034 - 17767934
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||  |||| |||||||||||||   |||||||||||  ||||  || ||| || |||||||| || |  |||| ||||||||||||||||||    
T  17768034 tctctctattcttttggtttttgtgtcaatgcttcattttctttacaaaaaattaattgtctcaaaagttgtcgtaaaaatgaatgttcaaataacacaa 17767935  T
Q  135 c 135  Q
    |    
T  17767934 c 17767934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 19109085 - 19108993
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaa 125  Q
    ||||||||||||||||||||||||||| || ||  |||||| ||||| ||||  ||  || ||||||||||| |||  || || |||||||||    
T  19109085 tctctctctattgctttgatttttgtgccactacttcatttcctttgcaaaaaatttgttgtcacaaaagttgtcacatatatgaatgttcaa 19108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 28494953 - 28495041
Alignment:
Q  47 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||| ||||||||||||||  | ||||||| |||||| || || || ||||||||||| | || |||||   |||||||||||||||||    
T  28494953 tttggtttttgtgtcaatacctaattttctgtgtaaatttatggttgtcacaaaagttgtaatttaaatggttgttcaaataacacaac 28495041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 33583212 - 33583164
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    ||||||||||| |||| ||||| ||||||||  ||||||||||||||||    
T  33583212 tctctctattgttttgttttttttgtcaatacctcattttctttgtaaa 33583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 44018318 - 44018350
Alignment:
Q  31 tctctctctctattgctttgatttttgtgtcaa 63  Q
    |||||||||||||||||||| ||||||||||||    
T  44018318 tctctctctctattgctttggtttttgtgtcaa 44018350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 22079567 - 22079453
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||  ||||||||||  |    
T  22079567 atgtttttactttctctctct--attgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatgga 22079470  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  22079469 tgttcaaataacacaac 22079453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 277072 - 277172
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||||||  |||||| |||||||||||    
T  277072 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaa 277171  T
Q  135 c 135  Q
    |    
T  277172 c 277172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 4820448 - 4820548
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| || ||||||||||||| ||||||  ||||||||||||||||    
T  4820448 tctctctattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaa 4820547  T
Q  135 c 135  Q
    |    
T  4820548 c 4820548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 26595416 - 26595530
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||  |||||||||||||||||||||| || |  |||||||| |||| |||||  |    
T  26595416 atgtttttactttctc--tctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatgga 26595513  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  26595514 tgttcaaataacacaac 26595530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 11612271 - 11612369
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||| |||||||||  ||||  |||||||||||||||||||||||||||||||||| ||||||  || |||||| |||||||||||||||    
T  11612271 tctctattgctttaatttttgtgcaaatacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaac 11612369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 3853299 - 3853206
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaa 126  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||  || || |||||||| |||| ||||| ||||||||||    
T  3853299 tctctctctattgctttgatttttgtgtcaatatctcattttctttgtaaaatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 32316918 - 32316818
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| ||||||||||| ||  |||||||||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||||    
T  32316918 tctctctattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 32316819  T
Q  135 c 135  Q
    |    
T  32316818 c 32316818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 33603264 - 33603170
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||  |||  ||||||| |||| |||||  ||||||||| ||||||||    
T  33603264 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttgacaatcttaaaagttgtcatataaatggatgttcaaaaaacacaac 33603170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 2242013 - 2241917
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||| |||||||||||||   ||||||||||||||  |||||| || |||||||||||||||| |||| ||| |||||||||||||||    
T  2242013 tctctattgctttggtttttgtgtcaatgcctcattttctttgtattattttggttgtcacaaaagttatcatgtaaagaaa-gttcaaataacacaa 2241917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 3552145 - 3552046
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||| || ||||| || |||||||||||  | |||||||||||||| || ||||||||||||||||||||||| ||||   ||||||||||||||||    
T  3552145 tctctctgttactttgcttattgtgtcaataccttattttctttgtaaatttatgattatcacaaaagttatcatccaaatggttgttcaaataacacaa 3552046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 552872 - 552974
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||    
T  552872 tctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 552971  T
Q  133 aac 135  Q
    |||    
T  552972 aac 552974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 1156799 - 1156901
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||| ||||| |||||||| || ||| |||||| ||||  |||||||||||| |||||||||||||||  || ||  |||||||||||||||    
T  1156799 tctctctctattactttggtttttgtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacac 1156898  T
Q  133 aac 135  Q
    |||    
T  1156899 aac 1156901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 14818011 - 14818113
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| ||||| |||| |||||||| || ||  |||||| |||| |||||||||| || ||||||||||| |||| || |||||||||||||||||||    
T  14818011 tctctctttattgttttggtttttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacac 14818110  T
Q  133 aac 135  Q
    |||    
T  14818111 aac 14818113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 5694155 - 5694041
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||| |||||||  |||| |||||||||||||||||||  |||||| ||||||||||||| | || || |||||||| |||  || || ||    
T  5694155 atgtttttactttttctctct--attgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaa 5694058  T
Q  119 tgttcaaataacacaac 135  Q
    |||| ||||||||||||    
T  5694057 tgtttaaataacacaac 5694041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 34047468 - 34047537
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    |||||||||||||||| |||||||| |||||| || ||||||||||||||||||| || |||||||||||    
T  34047468 tctctctattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgtcacaaaagtt 34047537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 11014974 - 11014890
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaa 125  Q
    ||||| ||| |||||||||||||||  ||||||||||  ||||||||||||| || ||||||||||||| |||||| ||||||||    
T  11014974 tattgatttaatttttgtgtcaatacctcattttcttcataaaattttgattgtctcaaaagttatcatataaatagatgttcaa 11014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 16199548 - 16199631
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  16199548 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 16199631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 18737568 - 18737460
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||  |||| ||||| |||| |||||||| |||||  |||||||||||||||||||||| || ||||||||||| |||  || ||  ||||    
T  18737568 tttttactttct--ctctttattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgt 18737471  T
Q  122 tcaaataacac 132  Q
    |||||||||||    
T  18737470 tcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 15974687 - 15974789
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||| | ||  |||||| ||||||||||||||| || ||||||||||| | |  || ||  |||||||||||||||    
T  15974687 tctctctctattgctttggtttttgtgttactacttcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacac 15974786  T
Q  133 aac 135  Q
    |||    
T  15974787 aac 15974789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 24900853 - 24900955
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| ||||   ||||||||||||||||||||| ||| |  |||| ||| |||| ||||   |||||||||||||||    
T  24900853 tctctctctattgctttggtttttgtgccaatcactcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacac 24900952  T
Q  133 aac 135  Q
    |||    
T  24900953 aac 24900955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 30423536 - 30423443
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||| |||||| ||||||  ||||||||||| ||||  ||||||| |  ||||||||||||  |||||| |||||||||||||||||    
T  30423536 tattgctttgaattttgtatcaatacctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacacaa 30423443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 30457573 - 30457686
Alignment:
Q  20 tgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaat 119  Q
    |||||||||||||||||| | |  || |||| ||||||||||||||  ||||||||| ||| |||||||| ||||| |||||||| |||| |||||  ||    
T  30457573 tgtttttactttctctctttgt--tgttttggtttttgtgtcaatacctcattttctatgtgaaattttggttatctcaaaagttgtcatataaatggat 30457670  T
Q  120 gttcaaataacacaac 135  Q
    ||| || |||||||||    
T  30457671 gttgaattaacacaac 30457686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 31883295 - 31883193
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||||||||||||||||||||| |  || |||||||||||||||| || || || ||||| || |||   |||||  ||||||||||| ||    
T  31883295 tctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatagttgttcaaataatac 31883196  T
Q  133 aac 135  Q
    |||    
T  31883195 aac 31883193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 33430342 - 33430252
Alignment:
Q  45 gctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||| ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  || || ||||| |||||||||||||    
T  33430342 gctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaac 33430252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 5080568 - 5080494
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||||||||||  ||||||||||||  ||||||||||| ||  |||||| ||||||||||||||| ||||||||    
T  5080568 tttttactttctct--ctctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttggttatcaca 5080494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 17551382 - 17551269
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||| |||||||  |||| |||| |||||||||||||   ||||||||||| | |||||||| || ||||||| | | ||||  ||||| |    
T  17551382 atgtttttactttatctctct--attgttttggtttttgtgtcaatccctcattttctttat-aaattttggttgtcacaaatgctgtcataaaaataga 17551286  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  17551285 tgttcaaataacacaac 17551269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 31077863 - 31077975
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    |||||||||| ||| ||||||||| |||| ||||||||||| ||  ||| || ||||||||||||||| || ||||||||||| |||  |  || ||| |    
T  31077863 tttttacttt-tctttctctattgttttggtttttgtgtcactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatat 31077961  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  31077962 tcaaataacacaac 31077975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 25127836 - 25127772
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||  |  |||||||||||||    
T  25127836 atgtttttactttctctctctctattgctttggtttccgtgtcaatacctacttttctttgtaaa 25127772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 13689982 - 13689931
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 88  Q
    |||||||||||||||||||||||||||||  |||||| |||| |||||||||    
T  13689982 tctctattgctttgatttttgtgtcaatacctcatttcctttataaaatttt 13689931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 1376435 - 1376497
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||| |||||||||||| |||| || |||||||||||| ||  ||||||||||||||    
T  1376435 tttttactttatctctctctattacttttatatttgtgtcaatacatatttttctttgtaaaa 1376497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 1384183 - 1384245
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||| |||||||||||| |||| || |||||||||||| ||  ||||||||||||||    
T  1384183 tttttactttatctctctctattacttttatatttgtgtcaatacatatttttctttgtaaaa 1384245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 20998137 - 20998087
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||||||||||||| ||||||| ||||||  ||||||||||||||||    
T  20998137 tctctctctattgctttggtttttgtatcaatacctcattttctttgtaaa 20998087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 6271417 - 6271477
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    ||||||||||||||||  ||||||||| |||| |||||||||||  ||||| |||||||||||||    
T  6271417 atgtttttactttctc--tctctattgttttggtttttgtgtca--atatctttttctttgtaaa 6271477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 91801 - 91842
Alignment:
Q  94 tcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||| |||| | ||||||||||||||||||||||||||||    
T  91801 tcacaacagttgtaatctaaataaatgttcaaataacacaac 91842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 8098598 - 8098524
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||||||||||  ||||||||||||| ||||||||||| ||  | |||| |||| |||||||||| || |||||    
T  8098598 tttttactttctct--ctctattgctttggtttttgtgtcactaccttatttcctttctaaaattttggttgtcaca 8098524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 1286982 - 1287022
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtca 62  Q
    |||||| |||||||||||| ||| |||||||||||||||||    
T  1286982 tttttattttctctctctcgattactttgatttttgtgtca 1287022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 59
Target Start/End: Complemental strand, 12588369 - 12588341
Alignment:
Q  31 tctctctctctattgctttgatttttgtg 59  Q
    |||||||||||||||||||||||||||||    
T  12588369 tctctctctctattgctttgatttttgtg 12588341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 14910258 - 14910310
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    |||||||||||||||||||||||||||| ||  | | |||||||||| |||||    
T  14910258 tctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 14910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 6e-34; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 28539744 - 28539630
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    |||||||||||||||||||||  |||||||||| ||||||| ||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||  |    
T  28539744 atgtttttactttctctctct--attgctttgacttttgtgccaaaacatcattttctttgcaaaattttggttatcacaaaagttatcatctaaatgga 28539647  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  28539646 tgttcaaataacacaac 28539630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 35377085 - 35376971
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||| |||||  |||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||  |    
T  35377085 atgtttttactttctttctct--attgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatgga 35376988  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  35376987 tgttcaaataacacaac 35376971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 37503733 - 37503637
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||||||| || |||||||||||||||  || ||||||||||||||||||||||    
T  37503733 tctattgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaac 37503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 5114157 - 5114259
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||| |||| || |||  |||||| |||||||||||||||    
T  5114157 tctctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacac 5114256  T
Q  133 aac 135  Q
    |||    
T  5114257 aac 5114259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 41309196 - 41309298
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||   || ||  |||||||||||||||    
T  41309196 tctctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacac 41309295  T
Q  133 aac 135  Q
    |||    
T  41309296 aac 41309298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 136
Target Start/End: Original strand, 44463436 - 44463539
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| ||| || ||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||| ||| |  |||||||||||||||    
T  44463436 tctctttctgttactttgatttttgtatcaatatcacattttctttgtaaaattttgattatctcaaaagttatcatataatttgatgttcaaataacac 44463535  T
Q  133 aaca 136  Q
    ||||    
T  44463536 aaca 44463539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 42889066 - 42889166
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||| |||||||| |||||||| |||||  |||||||||||||||||||||| ||||  |||||||| ||||||||||| ||||| |||||||||||    
T  42889066 tctctctgttgctttggtttttgtgccaataactcattttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaa 42889165  T
Q  135 c 135  Q
    |    
T  42889166 c 42889166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 42358628 - 42358529
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||| ||||||||||| |||  || ||  |||||||||||||||||    
T  42358628 tctctctattgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 13348126 - 13348028
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||||||||||| ||||||| ||||||  |||||||||||||||||||||| || || |||||||| |||| |||||  ||||||||||||||    
T  13348126 tctctctctattgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 13348028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 55151709 - 55151607
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||| ||||||| ||||||||||||||  |||||| |||||||||||||| ||| | ||||||||| |||  || |||||||||||||||||||    
T  55151709 tctctctctagtgctttggtttttgtgtcaatacttcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacac 55151610  T
Q  133 aac 135  Q
    |||    
T  55151609 aac 55151607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 33939306 - 33939419
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||  |||||| ||||| | ||||||| || ||||||||||| |||  || ||  ||||    
T  33939306 tttttactttctctctctctattgctttggtttttgtgtcactacttcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgt 33939405  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  33939406 tcaaataacacaac 33939419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 44413912 - 44413849
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  44413912 tctctctattgctttggtttttgtgtcaatatctcattttctttgtaaaattttgattgtcaca 44413849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 35201426 - 35201324
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| ||||||| |||| ||||||||||||||| | |||||||||||| |||||| ||| || |||||||| |||| |||||  |||||||||||||||    
T  35201426 tctctttctattgttttggtttttgtgtcaatatcttattttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacac 35201327  T
Q  133 aac 135  Q
    |||    
T  35201326 aac 35201324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 46623986 - 46624088
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| ||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||  |  ||  |||||||||||||||    
T  46623986 tctctttctattgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacac 46624085  T
Q  133 aac 135  Q
    |||    
T  46624086 aac 46624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 5244308 - 5244408
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || |||||||| || |||  || |||||||||||||||||||    
T  5244308 tctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacac 5244407  T
Q  133 a 133  Q
    |    
T  5244408 a 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 37057047 - 37056947
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||| |||  ||||||||||||||  |||||||||||||||||| ||| || || |||||||| |||| |||||  |||||||||||||||||    
T  37057047 tctctctattgtttttgtttttgtgtcaatacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaa 37056948  T
Q  135 c 135  Q
    |    
T  37056947 c 37056947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 44383286 - 44383370
Alignment:
Q  51 atttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||||  ||||||||||| ||||||||||||| || |||||||| |||| |||||  ||||||||||||||||||    
T  44383286 atttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaac 44383370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 42357077 - 42356974
Alignment:
Q  32 ctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    ||||||||||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || |||||||| || |||  || ||  ||||||||||||||    
T  42357077 ctctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataaca 42356978  T
Q  132 caac 135  Q
    ||||    
T  42356977 caac 42356974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 11630740 - 11630642
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    |||||||||| ||||| ||||| | ||||||  ||||||||||||||||||||| ||| || ||||| || |||| ||||| |||||||||||||||||    
T  11630740 tctctctattactttggtttttatatcaatacttcattttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 24256763 - 24256661
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| ||||| |||||||||||| ||||||  |||||| |||||||||||||| ||| ||||||||||| |||  || ||| || ||||||||||||    
T  24256763 tctctctttattgttttgatttttgtatcaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacac 24256664  T
Q  133 aac 135  Q
    |||    
T  24256663 aac 24256661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 27541503 - 27541392
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||    
T  27541503 tttttactttctct--ctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgt 27541406  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  27541405 tcaaataacacaac 27541392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 38926707 - 38926809
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||| ||  | |||| ||||||||||||||| || |||| |||||| |||  || ||| |||||||||||||||    
T  38926707 tctctctctattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacac 38926806  T
Q  133 aac 135  Q
    |||    
T  38926807 aac 38926809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 44413396 - 44413285
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||  |||| |||||||| | |||||||| |||||  |||||| |||||||||||||| ||| ||||||||||| |||  || ||| ||||    
T  44413396 tttttactttct--ctctttattgcttcggtttttgtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgt 44413299  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  44413298 tcaaataacacaac 44413285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 44813204 - 44813317
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    |||| |||||||||||||||||||||| | |||||||| || ||  | |||| ||||||||||||||||||  |||||||||| |||  || ||| ||||    
T  44813204 ttttaactttctctctctctattgcttgggtttttgtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgt 44813303  T
Q  122 tcaaataacacaac 135  Q
    |||||| |||||||    
T  44813304 tcaaatcacacaac 44813317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 36671004 - 36670904
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| |||||||| || ||  ||||||  |||||||||||||| || |||||||||||||||  || ||  |||||||||||||||||    
T  36671004 tctctctattgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaa 36670905  T
Q  135 c 135  Q
    |    
T  36670904 c 36670904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 20547991 - 20547911
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||  |||||||||||||||||||||| || ||  |||||| ||||||||||||||| || |||||||||||    
T  20547991 tttttactttctct--ctctattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagtt 20547911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 21217610 - 21217693
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  21217610 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 21217693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 23592556 - 23592639
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  23592556 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 23592639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 288805 - 288907
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||| ||| ||||||  ||||||||||||||||| | |||| |||| |||  || ||  || ||||||||||||    
T  288805 tctctctctattgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacac 288904  T
Q  133 aac 135  Q
    |||    
T  288905 aac 288907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 32924265 - 32924171
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||| ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||||||||||||||||    
T  32924265 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 32924171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 35597241 - 35597343
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||| ||||||||||| ||  || ||| ||||||||||||||| || ||||||||||| |||  || || ||| ||||||||||||    
T  35597241 tctctctctattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacac 35597340  T
Q  133 aac 135  Q
    |||    
T  35597341 aac 35597343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 51465725 - 51465631
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||||||||||||||| ||||||| ||| ||| | |||| || ||  |||| ||||||| |||||||||||| |||| |||||||    
T  51465725 tattgctttgatttttgtgtcaatatttcattttttttttaagactttggttgtctaaaaaattatcatataaataaatgtttaaatgacacaac 51465631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 52939730 - 52939832
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || |||| |||||| |||  || ||  |||||||||||||||    
T  52939730 tctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacac 52939829  T
Q  133 aac 135  Q
    |||    
T  52939830 aac 52939832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 8847195 - 8847260
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||| |||| |||||||| |||||  ||||||| |||||||||||||||||||||||||||||    
T  8847195 tctattgttttggtttttgtgccaatacctcattttatttgtaaaattttgattatcacaaaagtt 8847260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 14226694 - 14226638
Alignment:
Q  36 ctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgatt 92  Q
    |||||| ||| |||| ||||||||||||||| |||||||||||||||||||||||||    
T  14226694 ctctctgttgttttggtttttgtgtcaatatttcattttctttgtaaaattttgatt 14226638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 45711440 - 45711360
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||  |||||||| |||| || |||||||||||  |||||||||||||||||||||| || | |||||||||    
T  45711440 tttttactttctct--ctctattgttttggttattgtgtcaatacttcattttctttgtaaaattttggttgttacaaaagtt 45711360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 9719456 - 9719338
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaata-tatcattttcttt-gtaaaattttgattatcacaaaagttatcatctaaata 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||   || |||||||| |||||||| || ||||| |||||||| |||   ||||     
T  9719456 atgtctttactttctctctctctattgctttgattttcgtgtccataccttctttttctttagtaaaattatggttatcccaaaagttgtcaatcaaatg 9719357  T
Q  117 aatgttcaaataacacaac 135  Q
      |||||||||||||||||    
T  9719356 gttgttcaaataacacaac 9719338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 19149069 - 19149171
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| ||||| |||| |||||||| || ||  |||||| |||||||||||||||||| |||||||| || |||  || ||  |||||||||||||||    
T  19149069 tctctctttattgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacac 19149168  T
Q  133 aac 135  Q
    |||    
T  19149169 aac 19149171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 34627882 - 34627771
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||  |||| || ||||||||||||||| | ||||| | |||||||||||||| || || || ||  | ||||||||||  |||||| |||    
T  34627882 tttttactttct--ctctttactgctttgatttttgtataaatatcttattttctttgtaaatttatggttgtcttataagttatcataaaaataattgt 34627785  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  34627784 tcaaataacacaac 34627771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 44856032 - 44856134
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||| |||||||||||||| || ||  |||||| ||||||||||||||| || ||| | ||||| |||  || ||  |||||||||||||||    
T  44856032 tctctctctatttctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacac 44856131  T
Q  133 aac 135  Q
    |||    
T  44856132 aac 44856134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 52254139 - 52254028
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| ||||||||||| ||  |||||| ||||||||||||||  || |||||||| || |||  || ||  ||||    
T  52254139 tttttactttctct--ctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgt 52254042  T
Q  122 tcaaataacacaac 135  Q
    |||||| |||||||    
T  52254041 tcaaatgacacaac 52254028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 52326098 - 52326200
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||| ||||||||    ||  |||||| |||||||||||||||||| ||| ||||||| |||| || ||  |||||||||||||||    
T  52326098 tctctctctattgttttggtttttgtgcacttacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacac 52326197  T
Q  133 aac 135  Q
    |||    
T  52326198 aac 52326200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 55361234 - 55361175
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||  ||||||||||||||||    
T  55361234 tttttactttctct--ctctattgctttggtttttgtgtcaatacttcattttctttgtaaa 55361175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 41505570 - 41505635
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    |||||||||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || |||||    
T  41505570 tctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 41505635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 51982166 - 51982280
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||  |||||||||||||  ||||||||||||||  | ||||||||| |||||||||  || || ||||| || | || |||||  |    
T  51982166 atgtttttactttctc--tctctattgctttagtttttgtgtcaataccttattttctttataaaattttagttgtctcaaaaattgttatataaatgga 51982263  T
Q  119 tgttcaaataacacaac 135  Q
    | |||||||||||||||    
T  51982264 ttttcaaataacacaac 51982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 32587787 - 32587739
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  32587787 tctctctattgctttggtttttgtgccaatatttcattttctttgtaaa 32587739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 35299864 - 35299816
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  35299864 tctctctattgctttgatttttgtgtcaatacctcattttctttataaa 35299816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 39629842 - 39629729
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    |||||||||||||||||||||  |||| |||||||||| ||||||||  |  |||||||| |||||||||| ||||   ||||||| |||  ||| | |     
T  39629842 atgtttttactttctctctct--attgttttgatttttatgtcaataatttcttttctttataaaattttggttatactaaaagttgtcacataattgat 39629745  T
Q  119 tgttcaaataacacaa 134  Q
    ||||||||||||||||    
T  39629744 tgttcaaataacacaa 39629729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 6178429 - 6178385
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaata 65  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  6178429 atgtttttactttctctctct--attgctttgatttttgtgtcaata 6178385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 23155392 - 23155329
Alignment:
Q  71 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| ||||||||  |||||||||||  ||||||  ||||||||||||||||    
T  23155392 ttttctttgtaaaattatgattatcttaaaagttatcaattaaatagttgttcaaataacacaa 23155329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 23600707 - 23600774
Alignment:
Q  68 tcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  23600707 tcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 23600774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 33791774 - 33791706
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 89  Q
    |||||||||||||| ||||||  |||| ||||| |||||||||||||  ||||||||||||| ||||||||    
T  33791774 atgtttttactttccctctct--attgttttgacttttgtgtcaatacctcattttctttgtgaaattttg 33791706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 36756042 - 36755991
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||||||||||||||| ||| ||||  ||||||||||||||    
T  36756042 tctctctctattgctttgatttttgtgccaacatatacttttctttgtaaaa 36755991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 37302625 - 37302696
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    |||||||||||| ||||| |||||||| || ||  |||||| ||||| |||||||||||| |||||||||||    
T  37302625 tctctctctattactttggtttttgtgccactacctcatttcctttgcaaaattttgattgtcacaaaagtt 37302696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 16969558 - 16969456
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| ||||||| |||||||||| || || ||  |||||| ||||||||||||||  || ||||||||||| |||  || ||  |||||||||||||||    
T  16969558 tctctttctattgttttgatttttatgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacac 16969459  T
Q  133 aac 135  Q
    |||    
T  16969458 aac 16969456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 26014891 - 26014993
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||| |||||||| |  ||  |||||| ||||||||||||||| || ||||||||||| |||  |  ||| ||||| |||||||||    
T  26014891 tctctctctattgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacac 26014990  T
Q  133 aac 135  Q
    |||    
T  26014991 aac 26014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 31157661 - 31157567
Alignment:
Q  41 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||| ||||||||||||  |||||  | |||| |||||||||||||||||  ||||| |||||||||  || ||  ||||||||||||||||||    
T  31157661 tattgttttgatttttgtaccaatacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaac 31157567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 47472408 - 47472506
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    ||||||||| ||| |||  |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||| ||||||||||||||    
T  47472408 tctctctctgttgttttagtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataaca 47472506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 39630572 - 39630511
Alignment:
Q  70 attttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    ||||||||||||||||||||||| ||  |||| |||| || |||||| ||||||||||||||    
T  39630572 attttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataaca 39630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 50876354 - 50876301
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatt 86  Q
    ||||| |||||||||||||||||||| ||||||  || ||||||||||||||||    
T  50876354 tctctttctattgctttgatttttgtatcaatacctctttttctttgtaaaatt 50876301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 12762681 - 12762581
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| |||| ||||||||||||||||||||  |  ||||||||||||| || || || || || || || |||| ||||| | ||||||||||||||    
T  12762681 tctctctttattactttgatttttgtgtcaataactatttttctttgtaaatttatggttgtcccataaattgtcatgtaaatgattgttcaaataacac 12762582  T
Q  133 a 133  Q
    |    
T  12762581 a 12762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 49780726 - 49780630
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||| |||||||| |||||  || ||||||||||||| || || || ||| |||| ||||||  ||||||  | |||||||||||||||    
T  49780726 tctattgctttggtttttgtgccaatacctccttttctttgtaaatttatggttgtcataaaaattatcacttaaatagttattcaaataacacaac 49780630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 50314692 - 50314808
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatca-----ttttctttgtaaaattttgattatcacaaaagttatcatctaa 113  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||  |||     |||| ||| ||||| ||| ||||||  ||||||| |||| |||    
T  50314692 atgtttttactttctc--tctctattactttgatttttgtgtcaatacctcagttttttttttttttaaaaattt-attatcttaaaagttgtcatataa 50314788  T
Q  114 ataaatgttcaaataacaca 133  Q
    ||| || |||||||||||||    
T  50314789 atagatattcaaataacaca 50314808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 26452723 - 26452663
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||  |||||||||||||||||   |||||||| || |||||||||||||||    
T  26452723 tttttactttctct--ctctattgctttgatttccctgtcaatacatgattttctttgtaaaa 26452663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 48346895 - 48346939
Alignment:
Q  20 tgtttttactttctctctctctattgctttgatttttgtgtcaatat 66  Q
    |||||||||||||||  |||||||||||||| |||||||||||||||    
T  48346895 tgtttttactttctc--tctctattgctttggtttttgtgtcaatat 48346939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 52714813 - 52714864
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||||||||||||||| ||| | ||  ||||||||||||||    
T  52714813 tctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaa 52714864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 54099357 - 54099297
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||  ||||||||||||||||||| || ||| ||||  ||||||||||||||    
T  54099357 tttttactttctct--ctctattgctttgatttttatgccaacatatacttttctttgtaaaa 54099297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 3518595 - 3518537
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatc 95  Q
    |||||||||||||||||||||||||||||  | |||||||||  ||| || ||||||||    
T  3518595 tctctattgctttgatttttgtgtcaataccttattttctttacaaatttatgattatc 3518537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 32145977 - 32145923
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    ||||||||||||| |||||||||||||||| ||  | | ||||||||||||||||    
T  32145977 tctctctctattgttttgatttttgtgtcactacctaaatttctttgtaaaattt 32145923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 34532270 - 34532368
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    ||||| ||||||||| |||||||| ||||| | |  |||||||||||||  | || || ||||| || ||||||| ||||| | |||||||||||||||    
T  34532270 tctctttattgctttaatttttgtatcaatgtctacttttctttgtaaatatatggttgtcacataaattatcatgtaaatgattgttcaaataacaca 34532368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 40554888 - 40554842
Alignment:
Q  20 tgtttttactttctctctctctattgctttgatttttgtgtcaatat 66  Q
    |||||||||||| ||||| |||||||||||  |||||||||||||||    
T  40554888 tgtttttactttttctctttctattgctttagtttttgtgtcaatat 40554842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 44813437 - 44813387
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaat 85  Q
    |||||||||||||||| |||| ||||||||| ||  |||||||||||||||    
T  44813437 tctctctattgctttggttttcgtgtcaatacatggttttctttgtaaaat 44813387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 52313056 - 52313102
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||| |||| | |||||||||||||| ||||||||||||||||    
T  52313056 tctctattactttaacttttgtgtcaatatttcattttctttgtaaa 52313102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 9692805 - 9692834
Alignment:
Q  33 tctctctctattgctttgatttttgtgtca 62  Q
    ||||||||||||||||||||||||||||||    
T  9692805 tctctctctattgctttgatttttgtgtca 9692834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 1340171 - 1340143
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaa 63  Q
    |||||||||||||||||||||||||||||    
T  1340171 tctctctattgctttgatttttgtgtcaa 1340143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 8502882 - 8502834
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgta 81  Q
    |||||||||||||||||||||||| | |||||| || | ||||||||||    
T  8502882 tctctctctattgctttgatttttatctcaatacataaatttctttgta 8502834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 45000142 - 45000198
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 89  Q
    ||||||||||||| |||| |||||||| || ||  |||||| |||||||||||||||    
T  45000142 tctctctctattgatttggtttttgtgccactacctcatttcctttgtaaaattttg 45000198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 26207923 - 26208022
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  26207923 tctctctattgctttgatttta-tgtcaatacatcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaa 26208021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 18434862 - 18434976
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||||| |  |||| ||||||||||||| ||||| ||||||||||||| ||||||||| || ||||||||||| ||||||||||| |    
T  18434862 atgtttttactttctctcttt--attgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaataga 18434959  T
Q  119 tgttcaaataacacaac 135  Q
    | |||||||||||||||    
T  18434960 ttttcaaataacacaac 18434976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 44519152 - 44519041
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||||||||||||  ||||  |||||| ||||||||||||||| |||||||||||||| |||  || || |||||    
T  44519152 tttttactttctct--ctctattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgt 44519055  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  44519054 tcaaataacacaac 44519041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 31827032 - 31827132
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||| |||| ||||||||||||||  ||||||| |||||||||||||| || |  |||||||| ||||||||||| |||||||||||||||||    
T  31827032 tctctctattgatttggtttttgtgtcaataactcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaa 31827131  T
Q  135 c 135  Q
    |    
T  31827132 c 31827132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 50149029 - 50149127
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||||||||||| |  |||||||| |||| ||||   ||||||||||||||||||    
T  50149029 tctctattgctttggtttttgtgtcaatcaatcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaac 50149127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 45333790 - 45333891
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| |||||||||||||||||||||| ||  |||||| |||||||||||||| ||| |||||||| ||||||  || ||| |||||||||||||||    
T  45333790 tctctctttattgctttgatttttgtgtcactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacac 45333889  T
Q  133 aa 134  Q
    ||    
T  45333890 aa 45333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 49065368 - 49065254
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    |||||||||||||||||||||  ||||||||| |||||||| |||||  |||||||||||||||||||||| |||||   ||| || |||| |||||| |    
T  49065368 atgtttttactttctctctct--attgctttggtttttgtgccaatacttcattttctttgtaaaattttggttatctttaaaattgtcatataaataga 49065271  T
Q  119 tgttcaaataacacaac 135  Q
    | |||||||||||||||    
T  49065270 tattcaaataacacaac 49065254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 19947734 - 19947634
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| |||||||  |||||  || |||||||| |||||||||| || || |||||||| |||| ||||||||||||||||||||||||    
T  19947734 tctctctattgctttggtttttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaa 19947635  T
Q  135 c 135  Q
    |    
T  19947634 c 19947634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 30467523 - 30467423
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||||||| ||||||||| | || |||||||||||||| |||  || ||||||||||| |||| ||| || |||||||||||||||||    
T  30467523 tctctctattgctttgatttgtgtgtcaatctctcgttttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaa 30467424  T
Q  135 c 135  Q
    |    
T  30467423 c 30467423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 30570605 - 30570705
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||| |||||||||||||  ||||| ||  ||||||||||||||||||||| |  ||||| ||||||| ||||| ||||||||||||||||||    
T  30570605 tctctctattgttttgatttttgtgctaatatctcgatttctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaa 30570704  T
Q  135 c 135  Q
    |    
T  30570705 c 30570705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 3982027 - 3981916
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  |||||||| |||| || |||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||  |  ||  ||||    
T  3982027 tttttactttctct--ctctattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgt 3981930  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  3981929 tcaaataacacaac 3981916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 26021064 - 26020970
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    ||||||||| ||||||| |||||||||||| || |||| ||||||||||||||||| || |||||| | |||| ||||| |||||||||||||||    
T  26021064 tctctattgatttgattattgtgtcaatatctctttttttttgtaaaattttgattgtctcaaaagatgtcatataaatgaatgttcaaataaca 26020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 33100887 - 33100989
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||||||||||||||| ||  |||||| |||| |||||||||| || ||||||||||| |||  || || ||||||||||||||||    
T  33100887 tctctctctattgttttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacac 33100986  T
Q  133 aac 135  Q
    |||    
T  33100987 aac 33100989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 48470718 - 48470820
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||| ||| |||| |||||| |||||| |||||||||||||||||| ||||||||||| |||  || ||  |||||||||||||||    
T  48470718 tctctctctattgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacac 48470817  T
Q  133 aac 135  Q
    |||    
T  48470818 aac 48470820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 9566964 - 9566850
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    |||||||||||||||| ||||  ||||||||| ||||||||||||||    ||||||| |||||||||||| || || |||||||| |||| ||| | ||    
T  9566964 atgtttttactttctcactct--attgctttggtttttgtgtcaataccctattttctatgtaaaattttggttgtctcaaaagttgtcatataattgaa 9566867  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  9566866 tgttcaaataacacaac 9566850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 43775285 - 43775386
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||  ||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||| |||  || || ||| ||||||||||||    
T  43775285 tctctctctattgttttagtttttgtatcaatatctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacac 43775384  T
Q  133 aa 134  Q
    ||    
T  43775385 aa 43775386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 35369779 - 35369879
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||||||||||||||| ||  |||||| |||| |||||||||| || ||||||||||| |||  || ||  |||||||||||||||    
T  35369779 tctctctctattgctttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 35369878  T
Q  133 a 133  Q
    |    
T  35369879 a 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 45640383 - 45640482
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||   ||||||||| |||  || ||| |||||||||||||||||    
T  45640383 tctctctattgctttgatttttgtgccaatatctca-tttctttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaa 45640481  T

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Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 50932382 - 50932481
Alignment:
Q  32 ctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||| |||||||||||||||||||||||||||  |||||| ||||||||||||||| || | ||||||||| |||  || ||  ||||||||||||||    
T  50932382 ctctctttctattgctttgatttttgtgtcaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 649848 - 649950
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  ||  |  |||||||||||||||    
T  649848 tctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacac 649947  T
Q  133 aac 135  Q
    |||    
T  649948 aac 649950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 19055760 - 19055649
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  |||||||| |||| |||||||| |||||| |||||| ||||||||||||||  || ||||||||||| |||  || ||  ||||    
T  19055760 tttttactttctct--ctctattgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgt 19055663  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  19055662 tcaaataacacaac 19055649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 25672421 - 25672523
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| |||||| ||||  ||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||| ||||||  |||||| |||| ||    
T  25672421 tctctttctattactttagtttttgtgtcaatactttattttctttgtaaaattttgattatatcaaaagttatcatataaatagttgttcagataatac 25672520  T
Q  133 aac 135  Q
    |||    
T  25672521 aac 25672523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 26469438 - 26469540
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||| | ||||||||||| ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||    
T  26469438 tctctctctattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 26469537  T
Q  133 aac 135  Q
    |||    
T  26469538 aac 26469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 31088260 - 31088362
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| || ||  ||||||| |||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||    
T  31088260 tctctctctattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 31088359  T
Q  133 aac 135  Q
    |||    
T  31088360 aac 31088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 50726249 - 50726138
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  |||||||| ||||||||||||| || ||  |||||||||||| ||||||||| || |||||||| ||||||  || ||  ||||    
T  50726249 tttttactttctct--ctctattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgt 50726152  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  50726151 tcaaataacacaac 50726138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 51137625 - 51137547
Alignment:
Q  51 atttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataa 129  Q
    |||||| ||||||||| ||||| |||||||||||||||| ||||||||||  ||||||| ||||||||| |||||||||    
T  51137625 atttttatgtcaatatctcattctctttgtaaaattttgtttatcacaaatattatcatataaataaatattcaaataa 51137547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 21401491 - 21401579
Alignment:
Q  47 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||| |  |||||||| |||  |||||  ||||||||||||||||||    
T  21401491 tttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaac 21401579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 27465047 - 27464947
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||||    
T  27465047 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 27464948  T
Q  135 c 135  Q
    |    
T  27464947 c 27464947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 37685410 - 37685506
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||||||||||||||||||||| ||  ||||||  ||||||||||||| ||| |||||||| ||||||  |  || |||||||||||||||    
T  37685410 tctctctattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataaca 37685506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 37700108 - 37700012
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||||||||||||||||||||| ||  ||||||  ||||||||||||| ||| |||||||| ||||||  |  || |||||||||||||||    
T  37700108 tctctctattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataaca 37700012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 45121474 - 45121371
Alignment:
Q  31 tctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataac 130  Q
    |||||||||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||    
T  45121474 tctctctctctattgctttggtttttgtgccactac-tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataac 45121376  T
Q  131 acaac 135  Q
    |||||    
T  45121375 acaac 45121371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 46907293 - 46907376
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| ||||||||||||| || |||||||| || | |||||  ||||||||||||||||||    
T  46907293 tttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaac 46907376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 52576303 - 52576191
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaat-aaatg 120  Q
    ||||||||||||||  ||||||||||||| |||||||| |  ||  |||||| ||||||||||||||| || ||||||||||| ||| ||| || || ||    
T  52576303 tttttactttctct--ctctattgctttggtttttgtgccggtacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattg 52576206  T
Q  121 ttcaaataacacaac 135  Q
    |||||||||||||||    
T  52576205 ttcaaataacacaac 52576191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 8846041 - 8846130
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgt--aaaattttgattatcacaaaagttatca 108  Q
    ||||||||||||| ||| |||  ||||||||| |||||||||||||| ||| ||||||||||  |||||| ||||||||| |||||||||||    
T  8846041 atgtttttactttttctttct--attgctttggtttttgtgtcaatacatctttttctttgtaaaaaattatgattatcataaaagttatca 8846130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 740956 - 740892
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatt 86  Q
    |||||||||||||||||||||||  |||| ||||||||| |||| || |||||||||||||||||    
T  740956 tttttactttctctctctctattattttggtttttgtgttaatacataattttctttgtaaaatt 740892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 6809661 - 6809757
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||| |||| |||||||||||||  ||| ||||||||||| | |||||||||| || || |||||||| |||| |||||  ||||||||||||||    
T  6809661 tctctccattgttttgatttttgtgctaatgtatcattttctatataaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 6809757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 6693238 - 6693301
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||||||| |||| ||||| ||||||||  |||||| ||||||||||||||||||||||||    
T  6693238 tctctctattgttttggtttttatgtcaatacctcatttcctttgtaaaattttgattatcaca 6693301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 15083051 - 15082983
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgatt 92  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||    
T  15083051 tttttactttctct--ctctattgctttggtttttgtgtcaatacttcatttcctttgtaaaagtttgatt 15082983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 27533488 - 27533420
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 89  Q
    ||||||||||||||||||| |  |||| |||||||||| ||||||||  ||||||||||||||||||||||    
T  27533488 atgtttttactttctctcttt--attgttttgatttttatgtcaatacctcattttctttgtaaaattttg 27533420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 37275021 - 37274954
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    |||||||||||||| ||||||||||| ||  |||||| ||||| |||||||||||| |||||||||||    
T  37275021 tctctattgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagtt 37274954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 40328718 - 40328663
Alignment:
Q  76 tttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||    
T  40328718 tttgtaaaattttggttatatcaaaagttatcatctaaatagatgttcaaataaca 40328663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 50775160 - 50775080
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaa 101  Q
    ||||||||||||| |||||||  ||||||||| |||||||||||| | ||| |||||||||||||||| || || ||||||||    
T  50775160 atgtttttactttatctctct--attgctttggtttttgtgtcaacacatctttttctttgtaaaattatggttgtcacaaaa 50775080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 2571715 - 2571817
Alignment:
Q  35 tctctctattgctttg-atttttgtgtcaatatatcattttctttg-taaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||| |||| |||||||||||| ||  |||||||||||| |||||||||| || ||||||||||| |||| |  ||  |||||||||||||||    
T  2571715 tctctctattgttttgtatttttgtgtcactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacac 2571814  T
Q  133 aac 135  Q
    |||    
T  2571815 aac 2571817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 9988031 - 9988133
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||||||||||||||||| ||||   ||||||| |||||||||||||| || |  |||| ||| | || ||||   |||||||||||||||    
T  9988031 tctctctctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgttgcaaaggttgtaatataaaatgatgttcaaataacac 9988130  T
Q  133 aac 135  Q
    |||    
T  9988131 aac 9988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 29359718 - 29359772
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 89  Q
    |||||||||||||||| |||||||| || || |||||||||||||||||||||||    
T  29359718 tctctctattgctttggtttttgtgccattacatcattttctttgtaaaattttg 29359772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 37619623 - 37619721
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||||||| |||||||||||| |||||  |||||| ||||||||||||||| || | | ||||||| |||  || ||  ||||||||||||||    
T  37619623 tctctctctattgcgttgatttttgtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataaca 37619721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 18512347 - 18512233
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||| |||||||  ||||||||  ||||| ||||||||  ||||||||||| |||||||||  || ||  |||| ||||||| |||||  |    
T  18512347 atgtttttactttatctctct--attgctttagtttttatgtcaatacctcattttctttataaaattttagttgtcttaaaaattatcatataaattga 18512250  T
Q  119 tgttcaaataacacaac 135  Q
    |||| ||||||||||||    
T  18512249 tgttgaaataacacaac 18512233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 51436658 - 51436601
Alignment:
Q  46 ctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagt 103  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||| || |||||||    
T  51436658 ctttgatttttgtgtcaatatctcgttttctttgtaaaactttgattctctcaaaagt 51436601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 51571350 - 51571236
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||| |||  ||||||||| ||||||||||||||  || |||||||||||||||| || || || ||||| || |||   ||||       
T  51571350 atgtttttactttctctttct--attgctttggtttttgtgtcaatacctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggt 51571253  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  51571252 tgttcaaataacacaac 51571236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 44914564 - 44914496
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaa 101  Q
    |||||||||||||||||  ||||||||||| ||  |||||| |||||||||||||||||| || |||||    
T  44914564 tctctctctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcgcaaaa 44914496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 23645490 - 23645561
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||| |||| |||||||| || ||  |||||| ||||||||||||||| || |||||||||||    
T  23645490 tctctctctattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagtt 23645561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 51718618 - 51718547
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||  |||||||||||||||| ||  |||||| ||||||||| ||||  ||||||||||||||    
T  51718618 tctctctctattattttgatttttgtgtcactacttcatttcctttgtaaagttttagttatcacaaaagtt 51718547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 14983840 - 14983923
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||||  ||||||||| |||  ||||||||||||||| || |||||||||| ||||| || || || ||||||||    
T  14983840 atgtttttactttctc--tctctattgttttagtttttgtgtcaatatctctttttctttgtgaaattatggttgtcccaaaagtt 14983923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 48261207 - 48261290
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||||  |||||||||||||| |||||||| |||||  || ||| |||||||||| | ||||| || ||||||||    
T  48261207 atgtttttactttctc--tctctattgctttggtttttgtgccaatacctcttttcctttgtaaaaatatgattgtctcaaaagtt 48261290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 33076199 - 33076252
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatt 86  Q
    |||||||||||| ||||||| |||||| ||||| || |||||||||||||||||    
T  33076199 tctctctctattactttgatatttgtgccaatacataattttctttgtaaaatt 33076252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 48858904 - 48858957
Alignment:
Q  34 ctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    ||||||||||||||||||||||||||||| ||| | | |||||||||| |||||    
T  48858904 ctctctctattgctttgatttttgtgtcactatctaaatttctttgtataattt 48858957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 8350188 - 8350089
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| ||||||||||| ||  | |||| |||||| |||||||| || |||| |||||| |||  || ||  |||||||||||||||||    
T  8350188 tctctctattgctttggtttttgtgtcactaccttatttcctttgt-aaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaa 8350090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 10627800 - 10627704
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    ||||||||||| |||||||||||| ||||||   |||||||||| |||||||||| || || ||||| || |||  || ||| ||||| ||||||||    
T  10627800 tctctctattgttttgatttttgtatcaataccacattttctttataaaattttgtttgtctcaaaaattgtcacatagatatatgttgaaataaca 10627704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 26208221 - 26208120
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatc---taaataaatgttcaaataacaca 133  Q
    ||||||||| |||||||||||||||||||  || |||||||| ||||||| |  ||||| ||||  |||| |||   ||||||  |||||||||||||||    
T  26208221 tctctattgttttgatttttgtgtcaatacttctttttctttataaaattatagttatcccaaatattattatcaattaaatagttgttcaaataacaca 26208122  T
Q  134 ac 135  Q
    ||    
T  26208121 ac 26208120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 29877377 - 29877428
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||| |||| |||| ||||||||| || |||||||||||||||    
T  29877377 tctctctctattgttttggttttcgtgtcaatacataattttctttgtaaaa 29877428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 30745068 - 30745115
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaa 82  Q
    ||||||||||| |||| |||||||||||||| || |||||||||||||    
T  30745068 tctctctattgttttggtttttgtgtcaatacataattttctttgtaa 30745115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 30766519 - 30766566
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaa 82  Q
    ||||||||||| |||| |||||||||||||| || |||||||||||||    
T  30766519 tctctctattgttttggtttttgtgtcaatacataattttctttgtaa 30766566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 49020401 - 49020346
Alignment:
Q  29 tttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||| ||||||||||| |||| |||||||| ||||||||  ||||||||||||||    
T  49020401 tttctttctctctattgttttggtttttgtgccaatatatatttttctttgtaaaa 49020346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 8447817 - 8447914
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatat-atcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||| |||  ||||||||  ||||| | | ||||||||||||| || ||||| ||||| ||||||||| |||||| | ||||||||||||||    
T  8447817 tctctctattgttttagtttttgtgcaaatatcaactttttctttgtaaa-ttatgattgtcacataagttatcaactaaatgattgttcaaataacac 8447914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 15470048 - 15469947
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||| |||||| |  | ||  |||||| |||| ||||||||| ||| |||||||| ||||||  || || ||||||||||||||||    
T  15470048 tctctctctattgttttggtttttgcgctactacctcatttcctttataaaattttaattgtcacaaaa-ttatcacatatatgaatgttcaaataacac 15469950  T
Q  133 aac 135  Q
    |||    
T  15469949 aac 15469947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 48103318 - 48103252
Alignment:
Q  70 attttctttgtaaaattttgattatcacaaaagttatcatctaaataaatg-ttcaaataacacaac 135  Q
    |||||||||||||||||||| || || |||||||| |||| |||||| ||| |||||||| ||||||    
T  48103318 attttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaac 48103252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 48983659 - 48983605
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    ||||| ||||||||||||||||||||| || ||| | | ||||||||||||||||    
T  48983659 tctctttctattgctttgatttttgtgccattatctaaatttctttgtaaaattt 48983605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 2269555 - 2269462
Alignment:
Q  42 attgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||| ||||||||||||||  | |||||||   |||||||||| || |  |||||||| |||| ||| | ||| |||||||||||||||    
T  2269555 attgctttggtttttgtgtcaataccttattttctaaataaaattttggttgtatcaaaagttgtcatataattgaatattcaaataacacaac 2269462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 4776837 - 4776906
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    |||||||||| |||||||||||||| || ||  |||||| |||| ||||||||  ||| |||||||||||    
T  4776837 tctctctattactttgatttttgtgccactacctcatttcctttataaaatttaaattgtcacaaaagtt 4776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 30973634 - 30973683
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||| ||||||| |||||||||||| ||  ||||||||||||||    
T  30973634 tctctctattactttgatatttgtgtcaatacatacttttctttgtaaaa 30973683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 44517939 - 44517878
Alignment:
Q  47 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatca 108  Q
    ||||||||||||||||||| ||  ||||||||||||| || |  ||||| ||||||||||||    
T  44517939 tttgatttttgtgtcaatacatatttttctttgtaaatttatagttatcccaaaagttatca 44517878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 3851239 - 3851335
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    ||||||||||| |||| ||||| ||||| ||  |||||| |||| |||||||||| || ||| ||||||| |||  || ||  ||||||||||||||    
T  3851239 tctctctattgttttggtttttctgtcactacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 8828122 - 8828057
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 89  Q
    ||||||||||||||  ||||||||||||| |||||||| |||||  ||||||  ||| ||||||||||    
T  8828122 tttttactttctct--ctctattgctttggtttttgtgccaatacctcatttcttttataaaattttg 8828057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 29706694 - 29706595
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| |||||||||| |||  ||||||||| || |||||||||||||| || || |||||  ||||||| |||   |||| | ||||||||||||||    
T  29706694 tctctctttattgctttggtttcggtgtcaatacat-attttctttgtaaatttatggttatcttaaaagttgtcacagaaatgattgttcaaataacac 29706596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 37186948 - 37187023
Alignment:
Q  56 tgtgtcaatatatcattttctttgtaaaattttgattatca-caaaagttatcatctaaataaatgttcaaataaca 131  Q
    ||||||||||  ||||||||||| ||||||||||  ||||| |||||||||| ||  |||||| |||||||||||||    
T  37186948 tgtgtcaatacctcattttctttataaaattttg-gtatcatcaaaagttattattaaaataattgttcaaataaca 37187023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 42539474 - 42539510
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttt 55  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  42539474 atgtttttgctttctctctctctattgctttggtttt 42539510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 39654889 - 39655005
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||| || || || ||  |||| ||||||||||||||      
T  39654889 atgtctttactatctctctctctattgctttgatttttgtgtcaatacctcattttctttgtaaatttatggttgtcttaaaaattatcatctaaatagt 39654988  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  39654989 tgttcaaataacacaac 39655005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 38376480 - 38376380
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||| |||||||||||||| || ||| ||||||||||||||||||||||||| |||||||| ||||||  || ||| |||||||||||||||||    
T  38376480 tctctctattactttgatttttgtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaa 38376381  T
Q  135 c 135  Q
    |    
T  38376380 c 38376380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 39195136 - 39195238
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| |||||||||| ||| |||| |||| | ||||||||||||||||| ||||||||||||||| ||| |||| |||||| |||||||||||||||    
T  39195136 tctctctatattgctttggtttgtgtgccaatctctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacac 39195235  T
Q  133 aac 135  Q
    |||    
T  39195236 aac 39195238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 39440563 - 39440665
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||||||||||||||| ||  |||||| |||| ||||||||||||| ||||||||||| |||  || || ||||||||||||||||    
T  39440563 tctctctctattgctttgatttttgtgtcactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacac 39440662  T
Q  133 aac 135  Q
    |||    
T  39440663 aac 39440665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 2575780 - 2575680
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| ||| ||||||||| | ||||||||||||||||| |||  || ||||||||||| |||| |||||| |||||||||||||||||    
T  2575780 tctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaa 2575681  T
Q  135 c 135  Q
    |    
T  2575680 c 2575680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 37997333 - 37997433
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| || | |||||| ||||||  || ||| ||||||||||| |||    
T  37997333 tctctctctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcac 37997432  T
Q  133 a 133  Q
    |    
T  37997433 a 37997433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 39478505 - 39478592
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcat 109  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||| ||||    
T  39478505 tttttactttctttctctatattactttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcat 39478592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 43175063 - 43175165
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||| |||||| ||||||||||| ||  |||||| |||||||||||||||||||||||||||||| |||  || ||  |||||||||||||||    
T  43175063 tctctctctatggctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacac 43175162  T
Q  133 aac 135  Q
    |||    
T  43175163 aac 43175165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 134
Target Start/End: Complemental strand, 42396029 - 42395928
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||||||||||||  ||||  ||||||| ||||||||| ||| |||||| ||||| ||||||| ||| || |||||||||||||||    
T  42396029 tctctctctattgctttgatttttgtgcaaatacctcattttttttgtaaaactttaattatctcaaaaattatcatataagtagatgttcaaataacac 42395930  T
Q  133 aa 134  Q
    ||    
T  42395929 aa 42395928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 27051078 - 27050978
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||  |  || ||||||||||||||||    
T  27051078 tctctctttattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacac 27050979  T
Q  133 a 133  Q
    |    
T  27050978 a 27050978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 29175306 - 29175406
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||| |||||||| ||||||||||||||  |||||| ||||||||||||||| || ||||||||||| |||  || || ||||||||||||||||||    
T  29175306 tctctctcttgctttggtttttgtgtcaatagctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaa 29175405  T
Q  135 c 135  Q
    |    
T  29175406 c 29175406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 19473946 - 19473847
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||| || |||| ||||||||||||||  ||||||||||||||||||||||||| || |||||||| |||| |||||  || ||||||||||||||    
T  19473946 tctctctaatgttttggtttttgtgtcaatacttcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaa 19473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 34616659 - 34616742
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||| ||||||||||| |||||||||| || || |||||||| |||| |||||| ||||||||||||||||||    
T  34616659 tttttgtgtcaatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaac 34616742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 11672113 - 11672015
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||||| | | ||||||||||| | || |||||| || |||||||||||||    
T  11672113 tctctctattgctttgatttttgtgtcaataatttattttctttataaaattttaagtgtcacaaaagttgtaatataaatagattttcaaataacaca 11672015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 42853656 - 42853758
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||| || ||||| || |||   ||||  |||||||||||||||    
T  42853656 tctctctctattgctttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacac 42853755  T
Q  133 aac 135  Q
    |||    
T  42853756 aac 42853758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 11068767 - 11068868
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||||||||||||||| |   |||||| ||||||||||||||| ||  |||||||||| |||  || || ||||||||||||||||    
T  11068767 tctctctctattgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacac 11068866  T
Q  133 aa 134  Q
    ||    
T  11068867 aa 11068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 24575852 - 24575742
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| |||||||| |||||  |||||| |||| |||||||||| || ||||||||||| |||  || ||| ||||    
T  24575852 tttttactttctct--ctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgt 24575755  T
Q  122 tcaaataacacaa 134  Q
    |||||||||||||    
T  24575754 tcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 26492088 - 26492188
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| |||||||| || ||  |||||| |||||||||||||||||| |||||||| || |||  || ||| |||||||||||||||||    
T  26492088 tctctctattgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaa 26492187  T
Q  135 c 135  Q
    |    
T  26492188 c 26492188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 44539815 - 44539915
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || || ||||||||||||||||||    
T  44539815 tctctctattgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaa 44539914  T
Q  135 c 135  Q
    |    
T  44539915 c 44539915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 53801749 - 53801649
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||  ||||||||||||||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||||    
T  53801749 tctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 53801650  T
Q  135 c 135  Q
    |    
T  53801649 c 53801649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 40348873 - 40348944
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||  |||||||||||| |||||||||||    
T  40348873 tctctctctattgctttggtttttgtgtcactatctcattttctttaaaaaattttgattgtcacaaaagtt 40348944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 26732304 - 26732406
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||| |||| |||||||| || ||  |||||||||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||    
T  26732304 tctctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 26732403  T
Q  133 aac 135  Q
    |||    
T  26732404 aac 26732406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 31641553 - 31641455
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||| ||||||||||||||||||||| ||  | |||| |||| |||||||||| || |||||||||||||||  || || |||||||||||||||||||    
T  31641553 tctccattgctttgatttttgtgtcactaccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaac 31641455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 10250516 - 10250406
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||  |||||||||||||||||||||| || ||||||||||| ||   || ||  ||||    
T  10250516 tttttactttctct--ctctattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgt 10250419  T
Q  122 tcaaataacacaa 134  Q
    |||||||||||||    
T  10250418 tcaaataacacaa 10250406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 56474758 - 56474657
Alignment:
Q  34 ctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    |||||||||||| |||| ||||||||||||||  |||||||||||||||| ||||| || || ||||| || | || | |||| ||||||||||||||||    
T  56474758 ctctctctattgttttggtttttgtgtcaatacctcattttctttgtaaagttttggttgtctcaaaaattgttatgtgaatagatgttcaaataacaca 56474659  T
Q  134 ac 135  Q
    ||    
T  56474658 ac 56474657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 21777459 - 21777547
Alignment:
Q  47 tttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||| |||||| ||| |||||||| |||||| |||||||||  |||| ||||||| ||||||| |||| ||||||||||||    
T  21777459 tttgatttttgtatcaatacatctttttctttataaaatcttgattatctaaaaaattatcatataaataattgtttaaataacacaac 21777547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 38382419 - 38382502
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  38382419 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 38382502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 47181939 - 47182022
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  47181939 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 47182022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 48402170 - 48402087
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  48402170 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 48402087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 7632462 - 7632351
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  |||||||||||||||||||||| ||||   ||||||| |||||||||||||| || |  |||| ||| |||| ||||   ||||    
T  7632462 tttttactttctct--ctctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgttgcaaaggttgtcatataaaatgatgt 7632365  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  7632364 tcaaataacacaac 7632351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 21775330 - 21775232
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||| ||| ||||||||||| |||||||| || |||| || ||||| |||||||| || ||||| |||||| | ||| |||||||||||    
T  21775330 tctctattgctttggtttctgtgtcaatatttcattttccttataaatttatgattgtcacaaaaattgtcatccaaataattattctaataacacaac 21775232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 36177989 - 36178087
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||| |||||||  || ||  |||||| |||| |||||||||  || |||||||||||||||  || ||||||||||||||||||||||    
T  36177989 tctctattgctttggtttttgtaccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaac 36178087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 37297128 - 37297229
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||| ||  |||||| ||| ||||||||||| || ||||||||||| |||  || ||  |||||||||||||||    
T  37297128 tctctctctattgctttggtttttgtgtcactacctcatttcctt-gtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacac 37297226  T
Q  133 aac 135  Q
    |||    
T  37297227 aac 37297229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 50608615 - 50608561
Alignment:
Q  34 ctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 88  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||    
T  50608615 ctctctctattactttgatttttgtgtcaatatctcatttcctttgtaaaatttt 50608561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 50831747 - 50831645
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||||||||||||||||||||| |  || |||||||||||||||| || || || |||||||| |||   ||||   ||||||||||||||    
T  50831747 tctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacac 50831648  T
Q  133 aac 135  Q
    |||    
T  50831647 aac 50831645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 56364017 - 56363935
Alignment:
Q  53 ttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaac 56363935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 10474102 - 10474010
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaat 127  Q
    |||||||||| ||||||||||||||||||||  || ||||||||||||| || || || ||| ||||||| | |||||||| | |||||||||    
T  10474102 tctctctattactttgatttttgtgtcaatacttctttttctttgtaaatttatggttgtcataaaagttgtaatctaaatgagtgttcaaat 10474010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 23369322 - 23369222
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| |||||||| || ||  |||||| |||||||| |||||| || ||||||||||| |||  || ||  |||||||||||||||||    
T  23369322 tctctctattgctttggtttttgtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 23369223  T
Q  135 c 135  Q
    |    
T  23369222 c 23369222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 26724962 - 26724862
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||| |||| ||||||||||| ||  |||||| ||||||||||||||  || | |||||||||||||  || ||  |||||||||||||||||    
T  26724962 tctctctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaa 26724863  T
Q  135 c 135  Q
    |    
T  26724862 c 26724862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 46038752 - 46038841
Alignment:
Q  43 ttgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||| |||||||  |||||  |||||||||||||||| || ||||||||| ||||||| |||  ||||||| ||||||||||||||||    
T  46038752 ttgctttggtttttgtaacaatacctcattttctttgtaaatttatgattatcataaaagttgtca--taaataattgttcaaataacacaa 46038841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 515618 - 515535
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||   |||||||||| |||| || |||||||  |||||||| |||| ||||||||| |||||||||||||||    
T  515618 tttttgtgtcaataccacattttctttataaatttatgattatttcaaaagttgtcatataaataaatattcaaataacacaac 515535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 31574931 - 31574880
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||||    
T  31574931 tctctctctattgctttgatttttgtatcaatacatgattttctttgtaaaa 31574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 1627562 - 1627445
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatc---acaaaagttatcatctaaat 115  Q
    |||||||||||||| |||||| |  ||||||| |||||||| |||||  |||||||||||||||| || || || ||   ||||||||| ||||| ||||    
T  1627562 atgtttttactttccctctctgt--tgctttggtttttgtgccaatacctcattttctttgtaaatttatggttgtcacaacaaaagttgtcatccaaat 1627465  T
Q  116 aaatgttcaaataacacaac 135  Q
    |  |||||||||||||||||    
T  1627464 agttgttcaaataacacaac 1627445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 50721745 - 50721634
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||| ||||||| |||||||||||||   |||||||||||||||||||||  || |  |||| ||| |||| ||||   ||||    
T  50721745 tttttactttctct--ctctactgctttggtttttgtgtcaatcactcattttctttgtaaaattttagttgttgcaaaggttgtcatataaaatgatgt 50721648  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  50721647 tcaaataacacaac 50721634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 51986121 - 51986223
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| |||||| ||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  |||||||||||||||    
T  51986121 tctctatctatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 51986220  T
Q  133 aac 135  Q
    |||    
T  51986221 aac 51986223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 35897786 - 35897874
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaata 128  Q
    |||||||||||||||||||||||||||  |||||||| ||||||||| | | || || ||||||||||||| |||||   ||||||||||    
T  35897786 tctattgctttgatttttgtgtcaatacttcattttcattgtaaaatatag-ttgtcccaaaagttatcatataaatggttgttcaaata 35897874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 5622539 - 5622639
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| ||||||||  | ||  |||||| ||||||||||||||  |||||||||||||| | |  || ||| || ||||||||||||||    
T  5622539 tctctctattgctttggtttttgtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaa 5622638  T
Q  135 c 135  Q
    |    
T  5622639 c 5622639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 32130229 - 32130145
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaat 119  Q
    |||||||||| |||| |||||||| |||||| ||||||||||||||| ||||||| || |  ||||||||  ||| |||||||||    
T  32130229 tctctctatttctttaatttttgtatcaatacatcattttctttgtataattttggttgtttcaaaagttgacatataaataaat 32130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 38134436 - 38134528
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataa 129  Q
    ||||||||| |||| ||||||||||| |   |||||| ||||||||||||||| |||||||||||||| |||  |  || |||||||||||||    
T  38134436 tctctattgttttggtttttgtgtcactgcctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 2268493 - 2268434
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||||||||||| || |||||    
T  2268493 tctattgttttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcaca 2268434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 3316471 - 3316546
Alignment:
Q  71 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaat-aacacaaca-tatataga 144  Q
    |||| ||||||||||||||||| || |||||||| ||||||||||  |||||||||| ||||||||| ||||||||    
T  3316471 ttttttttgtaaaattttgattgtctcaaaagttgtcatctaaatggatgttcaaataaacacaacactatataga 3316546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 38519873 - 38519927
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    ||||||||||||||||||||||||||| || ||| | | ||||||||||||||||    
T  38519873 tctctctctattgctttgatttttgtgccactatttaaatttctttgtaaaattt 38519927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 51255826 - 51255880
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    ||||||||||||||||||||||||||| || ||| | | ||||||||||||||||    
T  51255826 tctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaattt 51255880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 52895309 - 52895358
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatat-cattttctttgtaaa 83  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  52895309 tctctctattgctttgattttcgtgtcaatatctacattttctttgtaaa 52895358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 12387655 - 12387607
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    ||||| ||||| |||||||||||||||||||  ||||||||||||||||    
T  12387655 tctctttattgttttgatttttgtgtcaatacctcattttctttgtaaa 12387607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 39447848 - 39447888
Alignment:
Q  55 ttgtgtcaatatatcattttctttgtaaaattttgattatc 95  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  39447848 ttgtgtcaatacctcattttctttgtaaaattttgattatc 39447888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 39606049 - 39606153
Alignment:
Q  36 ctctctattgctttgatttttgtgtcaatata-----tcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataac 130  Q
    |||||||||||||| ||||||||| ||||| |     |||||| |||| |||||||||| |||||  ||||||| |||  || ||||||||||||||||     
T  39606049 ctctctattgctttaatttttgtgccaatacaatatttcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataat 39606148  T
Q  131 acaac 135  Q
    |||||    
T  39606149 acaac 39606153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 193612 - 193663
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||| |||||||||| ||||||||| ||  ||||||||||||||    
T  193612 tctctctctattactttgattttcgtgtcaatacatatttttctttgtaaaa 193663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 46634179 - 46634234
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 88  Q
    ||||| |||||| ||||||||||||||||| ||  |||||| ||||||||||||||    
T  46634179 tctctttctattactttgatttttgtgtcactacctcatttcctttgtaaaatttt 46634234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 47744502 - 47744402
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcatttt-ctttgtaaaattttgattatcacaaaagttatc-atctaaataaatgttcaaataacac 132  Q
    |||||||||||||||  |||||||  ||||||  |||||| |||||||||||| || || || ||||||||||| ||| |||||  ||||||||||||||    
T  47744502 tctctctattgctttagtttttgtaccaatat--catttttctttgtaaaattatggttgtcccaaaagttatcaatcaaaatagttgttcaaataacac 47744405  T
Q  133 aac 135  Q
    |||    
T  47744404 aac 47744402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 5386452 - 5386506
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    |||||||||||||||||||||||||||| | ||| | | |||||||||| |||||    
T  5386452 tctctctctattgctttgatttttgtgttactatctaaatttctttgtataattt 5386506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 16019556 - 16019586
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaa 63  Q
    |||||||||||||||||||||||||||||||    
T  16019556 tctctctctattgctttgatttttgtgtcaa 16019586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 19748752 - 19748814
Alignment:
Q  71 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    ||||||||||||| || ||||| |  |||||||||||| | |||||| |||||||||||||||    
T  19748752 ttttctttgtaaatttatgattgtttcaaaagttatcaccaaaataattgttcaaataacaca 19748814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 19791054 - 19790992
Alignment:
Q  71 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    ||||||||||||| || ||||| |  |||||||||||| | |||||| |||||||||||||||    
T  19791054 ttttctttgtaaatttatgattgtttcaaaagttatcaccaaaataattgttcaaataacaca 19790992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 24045324 - 24045354
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaata 65  Q
    |||||||||||||||||||||||||||||||    
T  24045324 tctctctattgctttgatttttgtgtcaata 24045354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 38510726 - 38510663
Alignment:
Q  70 attttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||| |||| ||||||||||||| |||||||| ||||||  || ||||||||| ||||||||||||    
T  38510726 atttcctttataaaattttgattgtcacaaaaattatca--tatataaatgttgaaataacacaac 38510663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 41849758 - 41849830
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttt-tgtgtcaatatatcattttctttgtaaaattttgatt 92  Q
    ||||||||||||||| || ||||||||||||| |||| ||||||||||| || ||||||||||||| || |||||    
T  41849758 atgtttttactttct-tc-ctctattgctttggttttttgtgtcaatatttctttttctttgtaaatttatgatt 41849830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 49449150 - 49449096
Alignment:
Q  38 ctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgatt 92  Q
    |||||||| |||| ||||||||  ||||  |||||||||||||||||||||||||    
T  49449150 ctctattgttttggtttttgtgctaatacctcattttctttgtaaaattttgatt 49449096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 5233621 - 5233560
Alignment:
Q  74 tctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||||||| |  |||||||| | |  |||||| ||||||||||||||||||    
T  5233621 tctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaac 5233560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 15522436 - 15522485
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||| |||||||||| |||| ||||||||| || |||||||||||||||    
T  15522436 tctctatattgctttggttttcgtgtcaatacatgattttctttgtaaaa 15522485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 27408223 - 27408256
Alignment:
Q  22 tttttactttctctctctctattgctttgatttt 55  Q
    |||||||||| |||||||||||||||||||||||    
T  27408223 tttttactttatctctctctattgctttgatttt 27408256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 31090686 - 31090593
Alignment:
Q  42 attgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||| |||||||||||||||||| | || |||||||| ||||||||| ||| ||   ||| ||||||| |||||  ||||| ||||| ||||||    
T  31090686 attgttttgatttttgtgtcaatgtctcgttttctttttaaaattttaattgtcttcaaaattatcatataaatggatgtttaaatatcacaac 31090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 35874906 - 35874844
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaa 83  Q
    |||||||||||||||||||||  |||| ||||||||  || |||||||||  |||||||||||||    
T  35874906 atgtttttactttctctctct--attgttttgatttccgtatcaatatatacttttctttgtaaa 35874844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 40693614 - 40693561
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaatttt 88  Q
    ||||||||||||||| ||||||||| ||||| ||  ||||||||| ||||||||    
T  40693614 tctctctattgctttaatttttgtgccaatacattcttttctttgcaaaatttt 40693561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 47015087 - 47015136
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||||||| |||||||| ||||| ||  ||||||||||||||    
T  47015087 tctctctattgctttggtttttgtgccaatagatacttttctttgtaaaa 47015136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 52204930 - 52204959
Alignment:
Q  33 tctctctctattgctttgatttttgtgtca 62  Q
    ||||||||||||||||||||||||||||||    
T  52204930 tctctctctattgctttgatttttgtgtca 52204959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 336799 - 336767
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaata 65  Q
    ||||||||||||||||||||||||||| |||||    
T  336799 tctctctctattgctttgatttttgtgccaata 336767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 9393845 - 9393877
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaata 65  Q
    ||||| |||||||||||||||||||||||||||    
T  9393845 tctctttctattgctttgatttttgtgtcaata 9393877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 15175631 - 15175727
Alignment:
Q  39 tctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||  ||||||||  ||||  |||||| ||||||||||||||| || | ||||||||| |||  || ||  |||||||||||| |||||    
T  15175631 tctattgcttttgtttttgtgctaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaac 15175727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 19232134 - 19232093
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaata 65  Q
    ||||||||||||||  |||||||||||||||||||||| |||||    
T  19232134 tttttactttctct--ctctattgctttgatttttgtgccaata 19232093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 31995888 - 31995836
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||  ||||||||||| ||||||||| ||| || ||||||||    
T  31995888 tttttgtgtcaatacctcattttctttctaaaattttaattgtctcaaaagtt 31995836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 46213051 - 46213151
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||| |||||||| ||||||||  | ||  |||||| ||||||||||||||| || | ||||||||| |||  || ||  || ||||||||||||||    
T  46213051 tctctctgttgctttggtttttgtgcaactacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaa 46213150  T
Q  135 c 135  Q
    |    
T  46213151 c 46213151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 50890065 - 50890033
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaata 65  Q
    ||||||||||||||||||||||||||| |||||    
T  50890065 tctctctctattgctttgatttttgtgccaata 50890033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 24614308 - 24614206
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||| ||||||||||||| ||||||||||| ||  |||||| ||||||||||||||||||||||||||||||||||  || || ||||||||||||||||    
T  24614308 tctcactctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacac 24614209  T
Q  133 aac 135  Q
    |||    
T  24614208 aac 24614206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 31445397 - 31445499
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |  ||||| ||||||| ||||   |||||||||||||||    
T  31445397 tctctctctattgctttgatttttgtgtcaatcactcattttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacac 31445496  T
Q  133 aac 135  Q
    |||    
T  31445497 aac 31445499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 40417841 - 40417955
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||| ||||  |||||||||| ||||| ||||||||  ||| |||||||||||||||||| || || |||||||| || | |||||| |    
T  40417841 atgtttttactttctttctc--tattgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaataga 40417938  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  40417939 tgttcaaataacacaac 40417955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 41189544 - 41189431
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttat--catctaaataaat 119  Q
    ||||||||||||||  ||||||||||||  ||||||||||||||  |||||| |||||||||||||||||| ||| |||||||||  ||| || || |||    
T  41189544 tttttactttctct--ctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaat 41189447  T
Q  120 gttcaaataacacaac 135  Q
    ||||||||||||||||    
T  41189446 gttcaaataacacaac 41189431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 35072354 - 35072252
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||| |||||||||| || |  |||||||| |||| |||||  ||||||| |||||||    
T  35072354 tctctttctattgctttgatttttgtgtcaatgtctcattttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacac 35072255  T
Q  133 aac 135  Q
    |||    
T  35072254 aac 35072252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 48062124 - 48062238
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||  ||||||||| |||| ||||||||||||||  ||||||||||| ||||||||||||| || ||||| ||||||   |||   |    
T  48062124 atgtttttactttctc--tctctattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattatcactcaaacgga 48062221  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  48062222 tgttcaaataacacaac 48062238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 4292495 - 4292607
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgt-aaaattttgattatcacaaaagttatcatctaaataa 117  Q
    ||||||||||||||||  ||||||||||||||||||||||  |||||| | ||||||||||| |||||||| |||||| |||||||| ||||  ||||      
T  4292495 atgtttttactttctc--tctctattgctttgatttttgtaccaatatttaattttctttgtaaaaattttaattatctcaaaagttgtcatgaaaatgg 4292592  T
Q  118 atgttcaaataacac 132  Q
    ||||| |||||||||    
T  4292593 atgtttaaataacac 4292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 35098695 - 35098593
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||| |||||||||||||||||||||||||| | ||||||||| | |||||||||| || |  |||||||| |||| |||||  || ||||||||||||    
T  35098695 tctctttctattgctttgatttttgtgtcaatgtctcattttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacac 35098596  T
Q  133 aac 135  Q
    |||    
T  35098595 aac 35098593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 38956619 - 38956508
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||    
T  38956619 tttttactttctct--ctctattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgt 38956522  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  38956521 tcaaataacacaac 38956508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 35207582 - 35207679
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||||| ||||||||||||  ||||||| |||||||||||||| || || ||||  ||||| | |||||  |||||||||||||||||    
T  35207582 tctctctattgctttgatatttgtgtcaatacttcattttatttgtaaaattttggttgtctcaaa--ttatcctataaatggatgttcaaataacacaa 35207679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 9428530 - 9428597
Alignment:
Q  68 tcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||| | ||||||||||||||  ||| |||||||| |||||||||||||||||||||||||    
T  9428530 tcattttctttattaaattttgattatctaaaatgttatcatataaataaatgttcaaataacacaac 9428597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 30064520 - 30064587
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaag 102  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||||| ||| || ||||||    
T  30064520 tctctctattgctttgattttcatgtcaatacatcattttctttgtaaaattttaattgtctcaaaag 30064587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 46022240 - 46022157
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| |||||||||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  46022240 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 46022157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 41018743 - 41018845
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||| ||||| ||||||||| ||||  || ||||||||||||| || ||||| ||| ||||||| ||| |||||||  | ||||||||||||    
T  41018743 tctctctctattactttggtttttgtgttaatacctctttttctttgtaaatttatgattgtcataaaagttgtcacctaaatagttattcaaataacac 41018842  T
Q  133 aac 135  Q
    |||    
T  41018843 aac 41018845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 36352574 - 36352525
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  36352574 tctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaa 36352525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 25192907 - 25192807
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||| |||| ||||||||||| ||  |||||||||||||||||||||  || ||||||||||| |||  |  || ||| ||||||||||||||    
T  25192907 tctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaa 25192808  T
Q  135 c 135  Q
    |    
T  25192807 c 25192807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 35628024 - 35627910
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||| |||| || |||||||||| ||||||||||||||  || |||||||| ||||||| || ||||| ||||||||||||   | |||      
T  35628024 atgtttttactttatctc-ct-tattgctttggtttttgtgtcaatacctctttttctttataaaattatggttatctcaaaagttatcaatcagatagt 35627927  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  35627926 tgttcaaataacacaac 35627910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 43025421 - 43025521
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    |||||||||||||||| |||||||| || ||| |||||| ||||||||||||||  || | ||||||||| |||  || ||| |||||| ||||||||||    
T  43025421 tctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaa 43025520  T
Q  135 c 135  Q
    |    
T  43025521 c 43025521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 47391315 - 47391215
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||| ||||| |||||||||||||||||||| |||||| |||| |||||| |||||| ||  ||||||||| |  || || ||||||||| ||||||||    
T  47391315 tctctttattgttttgatttttgtgtcaatatttcatttcctttataaaatattgattgtcttaaaagttattacatatatgaatgttcaactaacacaa 47391216  T
Q  135 c 135  Q
    |    
T  47391215 c 47391215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 7701642 - 7701725
Alignment:
Q  52 tttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||  ||||||||||| ||||| |||| || || |||||||| |||| |||||  ||||||||||||||||||    
T  7701642 tttttgtgtcaatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaac 7701725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 22918170 - 22918090
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||  |||||| |||||||||||||||||| || ||||||||    
T  22918170 tttttactttctct--ctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagtt 22918090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 38073297 - 38073364
Alignment:
Q  31 tctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    |||||||||||||||||||| |||||||| |||||  |||||| ||||||||||||||| || |||||    
T  38073297 tctctctctctattgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgtcaca 38073364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 44189311 - 44189227
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatca 108  Q
    ||||||||||||||  ||||||| ||||| ||||||||||| ||  |||||| ||||| ||| |||||||| |||||||||||||||    
T  44189311 tttttactttctct--ctctattactttggtttttgtgtcactaactcatttcctttgaaaatttttgattgtcacaaaagttatca 44189227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 44895573 - 44895493
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagtt 104  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || |||||||||||    
T  44895573 tttttactttctct--ctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagtt 44895493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 39110948 - 39111044
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||| || ||||| || || ||||| ||||  |||||| |||||||||||||||||    
T  39110948 tctctattgctttgattttt-tgtcaatacttcattttcattgtaaa-ttatgattgtctcataagttgtcattaaaataattgttcaaataacacaac 39111044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 42552976 - 42553078
Alignment:
Q  32 ctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||||| ||| |||| |||||||| |||||  || |||||||||||||||| || || || ||||||||||||  |||||   |||||||||||||    
T  42552976 ctctctctctgttgttttggtttttgtgccaatacctctttttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataaca 42553075  T
Q  132 caa 134  Q
    |||    
T  42553076 caa 42553078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 38259143 - 38259244
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttc-tttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacaca 133  Q
    ||||||||||| |||||||||||||||||||  || ||||| ||| |||| || ||||||||| |||||||||||  |||||   | |||||||||||||    
T  38259143 tctctctattgttttgatttttgtgtcaatacctctttttcttttataaatttatgattatcataaaagttatcaattaaattgttattcaaataacaca 38259242  T
Q  134 ac 135  Q
    ||    
T  38259243 ac 38259244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 38944913 - 38944978
Alignment:
Q  70 attttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    ||||||||||||||||||||||| ||  ||||||| |||| ||||| |||||| ||||||||||||    
T  38944913 attttctttgtaaaattttgattgtcttaaaagttgtcatataaatgaatgtttaaataacacaac 38944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 41430141 - 41430092
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||||||| |||| |||||||||||| |||||||||||||||    
T  41430141 tctctctattgctttggttttcgtgtcaatatatgattttctttgtaaaa 41430092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 41863619 - 41863538
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaata 116  Q
    ||||| |||||||||| |||||||| |||||  ||||||| ||||||||||||||||| ||  ||||||| |||| ||||||    
T  41863619 tctctttattgctttgttttttgtgccaatacctcattttatttgtaaaattttgattgtcttaaaagttgtcatataaata 41863538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 41989743 - 41989630
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatca--ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaat 119  Q
    ||||||||||||  |||| |||||||||| |||||||| || ||  |||  |||| |||||||||||||| || |||||||||||||||  || ||  ||    
T  41989743 tttttactttct--ctctttattgctttggtttttgtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggat 41989646  T
Q  120 gttcaaataacacaac 135  Q
    ||||||||||||||||    
T  41989645 gttcaaataacacaac 41989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 44649318 - 44649221
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||| || ||||| ||||||||||||||| | ||||||||| |||||||||  || || |||||||| ||||  ||||| ||||| |||||||||    
T  44649318 tctctcttttactttggtttttgtgtcaatatttaattttctttataaaattttagttgtctcaaaagttgtcatgaaaatagatgtttaaataacac 44649221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 136
Target Start/End: Complemental strand, 10700177 - 10700075
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||||||||||||||||||||||||| |  |  |||||||| ||||||| || || || |||||||| |||   |||| | ||||||||||||||    
T  10700177 tctctctctattgctttgatttttgtgtcaaga-ctttttttctttataaaattatggttgtcccaaaagttgtcaatcaaatgattgttcaaataacac 10700079  T
Q  133 aaca 136  Q
    ||||    
T  10700078 aaca 10700075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 35822975 - 35822915
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||  |||||||||||||||||||||| ||||| ||  ||||||||||||||    
T  35822975 tttttactttctct--ctctattgctttgatttttgtgccaatacatatttttctttgtaaaa 35822915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 3937111 - 3937013
Alignment:
Q  37 tctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||| ||||| |||||||| |||||  |||||| |||| |||||||||| || ||||||||||| |||  |  ||  ||||||||||||||||||    
T  3937111 tctctattactttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaac 3937013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 12007177 - 12007123
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    ||||||||||||||||||||||||||| || ||| | | ||||||||||||||||    
T  12007177 tctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaattt 12007123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 22925274 - 22925220
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttg 89  Q
    ||||| ||||||||| |||||||||||||||| | |||||| |||||||||||||    
T  22925274 tctctatattgctttaatttttgtgtcaatatcttattttccttgtaaaattttg 22925220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 29723920 - 29723862
Alignment:
Q  29 tttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    ||||||||||||||||||||||||||||||  || ||| | | ||||||||||||||||    
T  29723920 tttctctctctctattgctttgatttttgtaccactatctaaatttctttgtaaaattt 29723862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 30941467 - 30941501
Alignment:
Q  31 tctctctctctattgctttgatttttgtgtcaata 65  Q
    |||||||||||||||||||||||||||||||||||    
T  30941467 tctctctctctattgctttgatttttgtgtcaata 30941501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 40112955 - 40112844
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  ||||||||||||| |||||||| || ||  | |||| |||||||||||||||||| ||| | ||||| | |  || ||  ||||    
T  40112955 tttttactttctct--ctctattgctttggtttttgtgccactaccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgt 40112858  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  40112857 tcaaataacacaac 40112844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 6522250 - 6522163
Alignment:
Q  51 atttttgtgtcaatatatcattttctttgtaaaattttga---ttatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||||  ||||||| |||||||||||||||   || | | |||| ||||||| ||||| | |||||||||||||||||    
T  6522250 atttttgtgtcaatacttcattttttttgtaaaattttgatcttttttaaaaaaattatcatataaatgattgttcaaataacacaac 6522163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 38347625 - 38347726
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcac-aaaagttatcatctaaataaatgttcaaataacaca 133  Q
    ||||||||||  ||| |||||||||  ||||  | |||||||||||||||||||||||||| | |||| |||| |  |||||  ||||||||||||||||    
T  38347625 tctctctattattttaatttttgtgctaatactttattttctttgtaaaattttgattatctcaaaaaattattagataaatgtatgttcaaataacaca 38347724  T
Q  134 ac 135  Q
    ||    
T  38347725 ac 38347726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 42584884 - 42584933
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||||||| | ||||||||| || |||||||||||||||    
T  42584884 tctctctattgctttgattctcgtgtcaatagatgattttctttgtaaaa 42584933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 1284495 - 1284595
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||||||||||||| |||||||||||||||   | ||||||||  ||| || ||||| |  |||||||||||||  ||||   ||||||||||||||||    
T  1284495 tctctctattgctttaatttttgtgtcaataccactttttcttttcaaatttatgattgtatcaaaagttatcataaaaatggttgttcaaataacacaa 1284594  T
Q  135 c 135  Q
    |    
T  1284595 c 1284595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 32529846 - 32529746
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaa 134  Q
    ||||| |||||||||| ||||| | ||| ||  |||||| |||||||||||||||||| |||||||| || |||  || ||  ||| |||||||||||||    
T  32529846 tctctttattgctttggtttttttatcactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaa 32529747  T
Q  135 c 135  Q
    |    
T  32529746 c 32529746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 34108849 - 34108805
Alignment:
Q  34 ctctctctattgctttgatttttgtgtcaatatatcattttcttt 78  Q
    ||||||||| |||||||||||||||||||||| || |||||||||    
T  34108849 ctctctctactgctttgatttttgtgtcaatacatgattttcttt 34108805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 3683611 - 3683713
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaat-aaatgttcaaataaca 131  Q
    ||||||||||||| ||| |||||||||||||||  | ||||||||| || || ||| ||||||  ||||||| |||| ||||| |||  |||||||||||    
T  3683611 tctctctctattgttttaatttttgtgtcaataacttattttctttatagaa-tttaattatcttaaaagttgtcatttaaataaaacattcaaataaca 3683709  T
Q  132 caac 135  Q
    ||||    
T  3683710 caac 3683713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 32952442 - 32952411
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaat 64  Q
    ||||||||||||||||||||||||||||||||    
T  32952442 tctctctctattgctttgatttttgtgtcaat 32952411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 34507206 - 34507146
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||  |||||||||||||||||| ||||||||| || ||||| ||| |||||    
T  34507206 tttttactttctct--ctctattgctttgattttcgtgtcaatacatgattttttttataaaa 34507146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 40854655 - 40854595
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||  |||||||||||||||||||||| ||| | ||  ||||||||||||||    
T  40854655 tttttactttctct--ctctattgctttgatttttgtgccaacacatacttttctttgtaaaa 40854595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 43942746 - 43942813
Alignment:
Q  68 tcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||||||||||| ||  ||||||| ||||||  || ||  ||||||||||||||||||    
T  43942746 tcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaac 43942813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 46095030 - 46095134
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatca---ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataa 129  Q
    |||||||||||||  ||| ||||||||||||||| | |   ||||||||||| | |||||||| || |||| ||| |||| |||||| || |||||||||    
T  46095030 tctctctctattgtattggtttttgtgtcaatatcttactattttctttgtata-ttttgattgtctcaaaggttgtcatataaatagatattcaaataa 46095128  T
Q  130 cacaac 135  Q
    ||||||    
T  46095129 cacaac 46095134  T

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Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 43159575 - 43159465
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgt 121  Q
    ||||||||||||||  |||||||||||||  |||||| ||||||  || ||||||||||||| || || || |||  |||||| ||| ||||||   |||    
T  43159575 tttttactttctct--ctctattgctttg-gttttgtatcaatacctctttttctttgtaaatttatggttgtcatcaaagttgtcacctaaatggttgt 43159479  T
Q  122 tcaaataacacaac 135  Q
    ||||||||||||||    
T  43159478 tcaaataacacaac 43159465  T

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Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 19562348 - 19562287
Alignment:
Q  23 ttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    ||||||||||||||| |||||| |||||| ||| |||| |||| ||  ||||||||||||||    
T  19562348 ttttactttctctctatctattactttgactttcgtgtaaatacatacttttctttgtaaaa 19562287  T

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Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 38861175 - 38861240
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||||||||| |||| |||||||| || ||  | |||| |||||||||||||||||| |||||    
T  38861175 tctctctctattgttttggtttttgtgccactaccttatttactttgtaaaattttgattgtcaca 38861240  T

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Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 11326001 - 11326053
Alignment:
Q  54 tttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttat 106  Q
    ||||||||||||| || |||||||||||||||| | ||| || ||||||||||    
T  11326001 tttgtgtcaatatctctttttctttgtaaaattataattgtctcaaaagttat 11326053  T

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Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 24532946 - 24532905
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtca 62  Q
    |||||||||||||||||||||  ||||||||| |||||||||||    
T  24532946 atgtttttactttctctctct--attgctttggtttttgtgtca 24532905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 32803788 - 32803872
Alignment:
Q  53 ttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaacat 137  Q
    |||| ||||||||  | ||||| | ||||||||||| ||| |  |||||||| |||| |||||  ||||||||||||||||||||    
T  32803788 ttttatgtcaatactttattttttatgtaaaattttaattgtttcaaaagttgtcatataaatggatgttcaaataacacaacat 32803872  T

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Target: scaffold0148 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 20905 - 20791
Alignment:
Q  19 atgtttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaa 118  Q
    ||||||||||||||||| |||  ||||||||||||||| |  ||||| || |||||| ||| ||||||||||||||||||||| ||||||| |||||  |    
T  20905 atgtttttactttctctttct--attgctttgatttttctaccaatacataattttccttgcaaaattttgattatcacaaaaattatcatttaaatgga 20808  T
Q  119 tgttcaaataacacaac 135  Q
    |||||||||||||||||    
T  20807 tgttcaaataacacaac 20791  T

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Target: scaffold0067 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 35591 - 35667
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||||||||| |||||    
T  35591 tttttactttctctctctctattgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcaca 35667  T

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Target: scaffold0519 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 11861 - 11963
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| |  ||||||||||| |||| |  ||| |||||||||||| ||    
T  11861 tctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatac 11960  T
Q  133 aac 135  Q
    |||    
T  11961 aac 11963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 53353 - 53251
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||| ||| |||  ||||||||||||||| ||||||||||| |||| ||||| || ||  |||| ||||||| ||||||||||||||||||||||    
T  53353 tctctctcttttgttttagtttttgtgtcaatatctcattttctttataaatttttggttgtctaaaaacttatcatataaataaatgttcaaataacac 53254  T
Q  133 aac 135  Q
    |||    
T  53253 aac 53251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 24530 - 24439
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttca 124  Q
    |||||||||| |||||||  |||||||||||||| ||||||| ||| |||| |||||||| ||  |||| | ||||| ||||||||| ||||    
T  24530 tctctctctactgctttggattttgtgtcaatatctcattttttttataaacttttgattgtctaaaaaataatcatataaataaatattca 24439  T

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Target: scaffold0199 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 8747 - 8849
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    ||||||||| |||||||| ||||||||||| ||  |||||| ||||||||||||||| || ||| ||||||| |||  || ||  |||||||||||||||    
T  8747 tctctctctgttgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacac 8846  T
Q  133 aac 135  Q
    |||    
T  8847 aac 8849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 76611 - 76509
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacac 132  Q
    |||||||||||||||||| |||||||| || ||  |||||| ||||||||||||||| || ||||||||||| |||  || ||  ||||| |||||||||    
T  76611 tctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacac 76512  T
Q  133 aac 135  Q
    |||    
T  76511 aac 76509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 49374 - 49472
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||| |||||||  |||| ||||||||||| ||  |||||| ||||||||||||||| |||||||||||||| |||  || ||  ||||||||||||||    
T  49374 tctcactctattattttggtttttgtgtcactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataaca 49472  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 10964 - 10890
Alignment:
Q  22 tttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttgattatcaca 98  Q
    ||||||||||||||  |||||||  |||||||||||||| | ||  ||||||||||| ||||||||||||| |||||    
T  10964 tttttactttctct--ctctattattttgatttttgtgttactacctcattttctttataaaattttgattgtcaca 10890  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 469629 - 469526
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt-tgattatcacaaaagttatcatctaaataaatgttcaaataaca 131  Q
    |||||||| ||| ||||||||||||| ||||||  ||||||| |||   |||||| || || | |||||| |||||||| |||||  |||||||||||||    
T  469629 tctctctccattactttgatttttgtatcaatacctcatttttttttataaatttatggtttttacaaaaattatcatccaaatagttgttcaaataaca 469530  T
Q  132 caac 135  Q
    ||||    
T  469529 caac 469526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 1226 - 1275
Alignment:
Q  35 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaa 84  Q
    |||||||||||||||| |||||||| ||||| ||  ||||||||||||||    
T  1226 tctctctattgctttggtttttgtgccaatagatacttttctttgtaaaa 1275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 8944 - 8915
Alignment:
Q  33 tctctctctattgctttgatttttgtgtca 62  Q
    ||||||||||||||||||||||||||||||    
T  8944 tctctctctattgctttgatttttgtgtca 8915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 24041 - 24098
Alignment:
Q  23 ttttactttctctctctctattgctttgatttttgtgtcaatatatcattttctttgt 80  Q
    ||||| ||||||||| || ||| ||||||||||||||||||||| |  ||||||||||    
T  24041 ttttattttctctctttcaattactttgatttttgtgtcaatatctacttttctttgt 24098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 8919 - 8951
Alignment:
Q  33 tctctctctattgctttgatttttgtgtcaata 65  Q
    ||||||||||||||| |||||||||||||||||    
T  8919 tctctctctattgctatgatttttgtgtcaata 8951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 101893 - 101837
Alignment:
Q  31 tctctctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 87  Q
    |||||||||||||||||||||||||| ||||| ||  | | |||||||||| |||||    
T  101893 tctctctctctattgctttgatttttatgtcactacctaaatttctttgtataattt 101837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 71542 - 71478
Alignment:
Q  71 ttttctttgtaaaattttgattatcacaaaagttatcatctaaataaatgttcaaataacacaac 135  Q
    |||||||||||||||| | ||| |  ||||||||||||   |||||| |||||||||||||||||    
T  71542 ttttctttgtaaaattataattttatcaaaagttatcaaacaaataattgttcaaataacacaac 71478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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