View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10341_low_14 (Length: 250)

Name: NF10341_low_14
Description: NF10341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10341_low_14
NF10341_low_14
[»] chr6 (35 HSPs)
chr6 (1-237)||(33041569-33041795)
chr6 (21-136)||(10818343-10818458)
chr6 (22-136)||(9721140-9721254)
chr6 (21-141)||(1390446-1390566)
chr6 (22-136)||(33236079-33236192)
chr6 (22-135)||(9719034-9719147)
chr6 (22-93)||(21606889-21606960)
chr6 (22-136)||(1300748-1300862)
chr6 (22-135)||(5585304-5585418)
chr6 (22-136)||(30487308-30487421)
chr6 (22-141)||(34176463-34176581)
chr6 (21-136)||(14515598-14515713)
chr6 (34-133)||(19278039-19278138)
chr6 (22-91)||(4097559-4097628)
chr6 (22-86)||(10348850-10348914)
chr6 (22-93)||(2900038-2900109)
chr6 (21-136)||(665843-665958)
chr6 (24-136)||(16737998-16738110)
chr6 (22-89)||(31849238-31849305)
chr6 (67-136)||(10818231-10818300)
chr6 (66-135)||(26318477-26318546)
chr6 (34-93)||(9298625-9298685)
chr6 (67-135)||(19278211-19278278)
chr6 (21-92)||(1395763-1395834)
chr6 (22-92)||(30849960-30850028)
chr6 (39-89)||(7775996-7776046)
chr6 (67-136)||(14515475-14515544)
chr6 (22-92)||(2892650-2892719)
chr6 (65-130)||(23091129-23091195)
chr6 (44-93)||(31799070-31799120)
chr6 (22-91)||(2892890-2892959)
chr6 (70-135)||(21607020-21607085)
chr6 (67-135)||(4097686-4097754)
chr6 (21-65)||(13583846-13583890)
chr6 (96-136)||(23090997-23091037)
[»] chr3 (39 HSPs)
chr3 (22-141)||(41110318-41110437)
chr3 (22-136)||(24560345-24560459)
chr3 (21-141)||(18654597-18654717)
chr3 (22-118)||(52474043-52474139)
chr3 (22-141)||(41039947-41040066)
chr3 (33-135)||(28581189-28581291)
chr3 (22-136)||(36568906-36569019)
chr3 (23-93)||(37102194-37102264)
chr3 (22-87)||(9312522-9312587)
chr3 (22-134)||(37807208-37807321)
chr3 (26-119)||(46556277-46556369)
chr3 (21-117)||(25654991-25655087)
chr3 (22-93)||(220442-220513)
chr3 (22-93)||(30200133-30200204)
chr3 (22-136)||(16275707-16275821)
chr3 (22-93)||(21773910-21773981)
chr3 (22-132)||(27541937-27542047)
chr3 (21-134)||(10748299-10748407)
chr3 (67-136)||(34641163-34641232)
chr3 (22-75)||(43005804-43005855)
chr3 (22-87)||(52185144-52185207)
chr3 (44-135)||(17474209-17474301)
chr3 (67-142)||(24253895-24253970)
chr3 (49-141)||(26135952-26136044)
chr3 (22-81)||(2387817-2387876)
chr3 (70-133)||(14897981-14898044)
chr3 (67-141)||(220570-220644)
chr3 (44-134)||(17474356-17474446)
chr3 (67-117)||(28582682-28582732)
chr3 (22-135)||(40463874-40463987)
chr3 (67-136)||(41110494-41110563)
chr3 (22-87)||(55327498-55327563)
chr3 (49-136)||(13082856-13082943)
chr3 (67-134)||(55428552-55428619)
chr3 (54-136)||(23028086-23028168)
chr3 (70-135)||(6803377-6803442)
chr3 (67-132)||(21773788-21773853)
chr3 (67-136)||(24560219-24560288)
chr3 (67-115)||(30200264-30200312)
[»] chr1 (39 HSPs)
chr1 (22-134)||(8529927-8530039)
chr1 (22-141)||(41498532-41498652)
chr1 (22-136)||(40094935-40095049)
chr1 (28-141)||(12234144-12234257)
chr1 (22-136)||(30010460-30010574)
chr1 (22-141)||(38509891-38510010)
chr1 (22-141)||(43551993-43552108)
chr1 (22-136)||(35349468-35349578)
chr1 (22-136)||(2858934-2859048)
chr1 (22-135)||(20576136-20576247)
chr1 (22-135)||(7444623-7444736)
chr1 (22-90)||(32951366-32951434)
chr1 (21-93)||(49946633-49946705)
chr1 (22-93)||(36285619-36285690)
chr1 (23-142)||(28770852-28770969)
chr1 (22-86)||(50744332-50744397)
chr1 (22-93)||(6563704-6563775)
chr1 (67-142)||(32951491-32951566)
chr1 (22-84)||(45585739-45585801)
chr1 (22-92)||(51597796-51597866)
chr1 (22-93)||(40964726-40964798)
chr1 (67-131)||(2859105-2859169)
chr1 (22-93)||(10392000-10392072)
chr1 (74-141)||(23536777-23536844)
chr1 (28-107)||(26940874-26940953)
chr1 (67-141)||(35349635-35349709)
chr1 (22-93)||(41676407-41676480)
chr1 (67-136)||(30010334-30010403)
chr1 (71-136)||(41498406-41498471)
chr1 (49-141)||(2470727-2470819)
chr1 (44-136)||(2506689-2506781)
chr1 (71-134)||(35512974-35513037)
chr1 (67-117)||(10391893-10391943)
chr1 (67-149)||(12233999-12234081)
chr1 (87-136)||(20607410-20607459)
chr1 (67-140)||(25268437-25268510)
chr1 (39-136)||(40709294-40709391)
chr1 (67-135)||(7444481-7444549)
chr1 (67-135)||(38510067-38510135)
[»] scaffold0067 (2 HSPs)
scaffold0067 (21-142)||(39182-39304)
scaffold0067 (67-136)||(39363-39432)
[»] chr7 (44 HSPs)
chr7 (22-136)||(18231714-18231828)
chr7 (22-132)||(4833537-4833647)
chr7 (22-117)||(24970187-24970281)
chr7 (21-136)||(41496959-41497074)
chr7 (22-136)||(47390984-47391098)
chr7 (21-93)||(33655153-33655225)
chr7 (22-133)||(10315761-10315872)
chr7 (22-136)||(40196534-40196648)
chr7 (30-135)||(42306466-42306571)
chr7 (23-136)||(45940658-45940771)
chr7 (22-92)||(34235053-34235123)
chr7 (22-141)||(13770945-13771062)
chr7 (22-93)||(32872826-32872897)
chr7 (22-136)||(13425122-13425236)
chr7 (22-86)||(40572287-40572350)
chr7 (22-118)||(25887320-25887417)
chr7 (22-135)||(43230364-43230476)
chr7 (22-118)||(1051520-1051614)
chr7 (50-136)||(48881560-48881646)
chr7 (67-136)||(39856038-39856107)
chr7 (22-141)||(41008309-41008425)
chr7 (56-136)||(36267555-36267635)
chr7 (22-81)||(22163167-22163225)
chr7 (22-81)||(22221875-22221933)
chr7 (67-136)||(31571643-31571712)
chr7 (23-91)||(19835838-19835906)
chr7 (33-141)||(31553182-31553287)
chr7 (22-82)||(47229888-47229948)
chr7 (70-136)||(33519224-33519290)
chr7 (67-136)||(13771119-13771188)
chr7 (67-136)||(28074105-28074174)
chr7 (19-136)||(30592255-30592372)
chr7 (67-136)||(34228492-34228561)
chr7 (44-91)||(2087786-2087833)
chr7 (54-93)||(30891039-30891078)
chr7 (22-65)||(37417706-37417749)
chr7 (69-136)||(37925843-37925910)
chr7 (71-141)||(47390852-47390922)
chr7 (22-91)||(17852999-17853067)
chr7 (26-135)||(26365900-26366009)
chr7 (23-92)||(34228364-34228433)
chr7 (30-87)||(42087131-42087188)
chr7 (71-135)||(33655285-33655349)
chr7 (66-94)||(34235180-34235208)
[»] chr5 (44 HSPs)
chr5 (22-136)||(13634839-13634953)
chr5 (24-141)||(10650544-10650661)
chr5 (36-136)||(1657955-1658055)
chr5 (22-141)||(7544264-7544383)
chr5 (22-136)||(14245090-14245204)
chr5 (24-136)||(8502837-8502949)
chr5 (22-133)||(36363160-36363271)
chr5 (22-136)||(37607022-37607136)
chr5 (22-136)||(37779231-37779345)
chr5 (21-136)||(16938606-16938721)
chr5 (22-136)||(26415021-26415136)
chr5 (21-136)||(28279478-28279593)
chr5 (26-135)||(9798615-9798724)
chr5 (21-93)||(4373611-4373683)
chr5 (22-141)||(10476156-10476275)
chr5 (22-93)||(36392195-36392266)
chr5 (23-87)||(20146917-20146981)
chr5 (22-93)||(10072692-10072763)
chr5 (22-136)||(37551535-37551647)
chr5 (22-136)||(37654365-37654477)
chr5 (22-92)||(20513491-20513561)
chr5 (22-93)||(43535-43607)
chr5 (22-86)||(9857008-9857072)
chr5 (21-92)||(16501836-16501907)
chr5 (22-93)||(22023495-22023568)
chr5 (22-93)||(32727822-32727893)
chr5 (50-136)||(14245202-14245288)
chr5 (61-135)||(11757070-11757144)
chr5 (26-92)||(17024270-17024336)
chr5 (67-136)||(13634713-13634782)
chr5 (33-93)||(17780279-17780340)
chr5 (67-136)||(26414895-26414964)
chr5 (19-87)||(4423336-4423404)
chr5 (50-138)||(10650427-10650517)
chr5 (69-136)||(34980812-34980879)
chr5 (28-93)||(11419237-11419302)
chr5 (45-93)||(2556167-2556215)
chr5 (75-134)||(2550533-2550592)
chr5 (22-93)||(29002251-29002322)
chr5 (74-136)||(10476028-10476090)
chr5 (71-141)||(33744190-33744260)
chr5 (70-136)||(40815299-40815365)
chr5 (67-136)||(16938481-16938550)
chr5 (49-93)||(2550397-2550441)
[»] chr4 (39 HSPs)
chr4 (22-136)||(45742018-45742132)
chr4 (22-136)||(54935197-54935311)
chr4 (22-119)||(31348340-31348437)
chr4 (21-141)||(5730827-5730947)
chr4 (21-136)||(41174472-41174587)
chr4 (22-136)||(49735470-49735584)
chr4 (22-136)||(54320562-54320676)
chr4 (21-136)||(27735872-27735987)
chr4 (22-136)||(24565348-24565462)
chr4 (41-136)||(6938394-6938489)
chr4 (22-93)||(34110933-34111003)
chr4 (53-142)||(37711282-37711371)
chr4 (22-81)||(16400928-16400987)
chr4 (19-130)||(35248811-35248922)
chr4 (67-136)||(31348494-31348563)
chr4 (22-130)||(17938115-17938223)
chr4 (31-87)||(29798422-29798478)
chr4 (21-93)||(46007744-46007818)
chr4 (19-93)||(36278376-36278450)
chr4 (67-136)||(1968532-1968601)
chr4 (22-117)||(22659317-22659413)
chr4 (47-118)||(21694910-21694981)
chr4 (67-134)||(27735749-27735816)
chr4 (72-135)||(46007879-46007942)
chr4 (65-143)||(2247972-2248050)
chr4 (22-124)||(6891488-6891590)
chr4 (22-92)||(36151704-36151773)
chr4 (22-75)||(26167065-26167118)
chr4 (67-136)||(45132668-45132737)
chr4 (50-91)||(45911327-45911368)
chr4 (67-136)||(54576329-54576398)
chr4 (69-136)||(54935069-54935137)
chr4 (30-93)||(44784128-44784190)
chr4 (70-136)||(47433885-47433951)
chr4 (71-141)||(47846233-47846303)
chr4 (51-133)||(55510326-55510407)
chr4 (22-87)||(2247854-2247919)
chr4 (22-118)||(45132517-45132617)
chr4 (48-136)||(37761467-37761555)
[»] chr2 (39 HSPs)
chr2 (22-136)||(23748223-23748337)
chr2 (22-136)||(36347543-36347657)
chr2 (21-136)||(36046206-36046321)
chr2 (36-138)||(8426879-8426981)
chr2 (21-99)||(15224733-15224811)
chr2 (22-136)||(34209592-34209706)
chr2 (22-136)||(9631688-9631802)
chr2 (21-114)||(36566874-36566968)
chr2 (22-95)||(16565905-16565978)
chr2 (22-93)||(27926681-27926752)
chr2 (22-93)||(39732774-39732845)
chr2 (21-93)||(39821796-39821868)
chr2 (22-93)||(42316809-42316880)
chr2 (32-136)||(40022510-40022615)
chr2 (39-89)||(1583222-1583272)
chr2 (22-76)||(17379940-17379994)
chr2 (36-93)||(7681386-7681443)
chr2 (22-132)||(12541894-12541999)
chr2 (67-136)||(36347714-36347783)
chr2 (44-136)||(35736337-35736429)
chr2 (45-136)||(887261-887351)
chr2 (22-136)||(19566822-19566937)
chr2 (22-81)||(28262500-28262559)
chr2 (44-142)||(45257456-45257555)
chr2 (22-135)||(31795772-31795885)
chr2 (70-138)||(9426985-9427053)
chr2 (68-136)||(15224868-15224936)
chr2 (60-136)||(17380007-17380083)
chr2 (22-99)||(29525768-29525847)
chr2 (69-136)||(34187577-34187644)
chr2 (67-144)||(39732901-39732978)
chr2 (74-133)||(8427051-8427110)
chr2 (67-142)||(22356177-22356252)
chr2 (69-136)||(31061361-31061428)
chr2 (22-87)||(9427113-9427179)
chr2 (67-141)||(35736172-35736246)
chr2 (43-136)||(16713494-16713587)
chr2 (67-136)||(36046375-36046443)
chr2 (70-142)||(41841678-41841750)
[»] chr8 (44 HSPs)
chr8 (28-136)||(34634277-34634385)
chr8 (22-132)||(31543078-31543188)
chr8 (22-136)||(11785654-11785768)
chr8 (22-130)||(11575415-11575522)
chr8 (21-136)||(31738550-31738665)
chr8 (22-92)||(1281271-1281341)
chr8 (22-132)||(36308971-36309081)
chr8 (22-135)||(29690925-29691038)
chr8 (22-93)||(1026894-1026965)
chr8 (36-142)||(3726859-3726965)
chr8 (29-135)||(16653084-16653190)
chr8 (21-134)||(30479721-30479834)
chr8 (22-87)||(9718530-9718595)
chr8 (22-99)||(30664489-30664566)
chr8 (28-108)||(2248586-2248666)
chr8 (21-93)||(37923123-37923195)
chr8 (22-93)||(29358385-29358455)
chr8 (22-135)||(11033545-11033659)
chr8 (67-136)||(43732860-43732929)
chr8 (31-118)||(10028259-10028347)
chr8 (22-93)||(7502999-7503070)
chr8 (19-94)||(7979265-7979340)
chr8 (22-87)||(6315190-6315255)
chr8 (22-86)||(28083870-28083934)
chr8 (22-93)||(4247563-4247633)
chr8 (71-145)||(9718656-9718730)
chr8 (67-132)||(1281149-1281214)
chr8 (67-135)||(16024327-16024394)
chr8 (71-141)||(31543249-31543319)
chr8 (31-65)||(35694828-35694862)
chr8 (22-76)||(37032507-37032561)
chr8 (22-92)||(13405104-13405178)
chr8 (22-136)||(41103506-41103622)
chr8 (68-136)||(2248454-2248522)
chr8 (69-136)||(8815316-8815383)
chr8 (21-136)||(24243052-24243164)
chr8 (45-91)||(5562012-5562058)
chr8 (69-134)||(7394636-7394701)
chr8 (49-142)||(30365126-30365219)
chr8 (23-136)||(40990183-40990299)
chr8 (45-78)||(42919879-42919912)
chr8 (66-142)||(7503126-7503202)
chr8 (70-134)||(11575582-11575646)
chr8 (22-54)||(33922648-33922680)
[»] scaffold0262 (1 HSPs)
scaffold0262 (22-132)||(16302-16412)
[»] scaffold0171 (1 HSPs)
scaffold0171 (26-117)||(16082-16173)
[»] scaffold0198 (1 HSPs)
scaffold0198 (50-135)||(3150-3235)
[»] scaffold0026 (2 HSPs)
scaffold0026 (22-99)||(1300-1377)
scaffold0026 (67-135)||(1175-1243)
[»] scaffold0294 (1 HSPs)
scaffold0294 (22-139)||(15391-15507)
[»] scaffold0341 (1 HSPs)
scaffold0341 (22-93)||(18897-18968)
[»] scaffold0096 (2 HSPs)
scaffold0096 (28-91)||(6717-6780)
scaffold0096 (70-141)||(6581-6652)
[»] scaffold0007 (1 HSPs)
scaffold0007 (44-134)||(242366-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (70-136)||(17716-17780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (71-134)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 33041569 - 33041795
Alignment:
Q  1 ttaagtgtgattgaggtgttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccca 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||            
T  33041569 ttaagtgtgattgaagtgttatttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaat------- 33041661  T
Q  101 tcccttcccctcctaaactttccatccaaacacaccataaaacaaccatttttaagtaactcaaactaaatgagacaatgaaacattactctcaccacaa 200  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  33041662 ---cttcccctcctaaactttccatccaaacacaccataaaacaaccatttttaggtaactcaaactaaatgagacaatgaaacattactctcaccataa 33041758  T
Q  201 ctaaataacaccaagtaagttcacaatattaatgtct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  33041759 ctaaataacaccaagtaagttcacaatattaatgtct 33041795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 10818343 - 10818458
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    ||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||||||||  |||| ||||| |||||||||||||     
T  10818343 atttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactc 10818442  T
Q  121 tccatccaaacacacc 136  Q
    || |||||||||||||    
T  10818443 tcaatccaaacacacc 10818458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 9721254 - 9721140
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||  |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||  |||| |||||||||||||||||| ||    
T  9721254 tttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaacctt 9721155  T
Q  122 ccatccaaacacacc 136  Q
    | |||||||||||||    
T  9721154 caatccaaacacacc 9721140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 1390446 - 1390566
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    | | ||| ||||||||||||||      
T  1390446 atttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaaccc 1390545  T
Q  121 tccatccaaacacaccataaa 141  Q
    | |||||||||||||| ||||    
T  1390546 ttcatccaaacacaccttaaa 1390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 33236079 - 33236192
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |  |||| ||| |||| ||| |||||| |    
T  33236079 tttatcatgttaatatgttaactttttaaaaaa-atttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccctcctttcctctcataaactct 33236177  T
Q  122 ccatccaaacacacc 136  Q
    ||||||||| |||||    
T  33236178 ccatccaaatacacc 33236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 9719147 - 9719034
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||  |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||   |||| ||||||||||||||||||  |    
T  9719147 tttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccct 9719048  T
Q  122 ccatccaaacacac 135  Q
    | ||||||||||||    
T  9719047 caatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 21606960 - 21606889
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||    
T  21606960 tttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaagtaaac 21606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 1300748 - 1300862
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||  |||| ||| |||  || | ||||  |    
T  1300748 tttatcaggttaatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaagtaaaccctcccctccattcatcttccaaaccct 1300847  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  1300848 ccatccaaacacacc 1300862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 5585418 - 5585304
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatg-aaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    ||||| |||||||||||||| |||||||||||| |||||||||| | ||||||||||||| | ||||||||||  | |||| ||||||||||||||||      
T  5585418 tttattatgttaatatgttacctttttaaaaaacatttcatagtgttcgtaatttaaaaaagaaaaagtaaactcttccattccttcccctcctaaaccc 5585319  T
Q  121 tccatccaaacacac 135  Q
    |||||||||||||||    
T  5585318 tccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 30487421 - 30487308
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||| ||||||||||| | |||||||| | ||| |||||||| |||||||||| |||  |||| ||||||||||||||||||  |    
T  30487421 tttatcatgttaatatgttgactttttaaaagacatttcatactgtcc-taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccct 30487323  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  30487322 ccatccaaacacacc 30487308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 34176463 - 34176581
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccct-tcccctcctaaactt 120  Q
    ||||| |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||  || |||| || | ||||| |||||      
T  34176463 tttattatgttaatatgttaactttaaaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaac--tctcatctctcttccctcataaaccc 34176560  T
Q  121 tccatccaaacacaccataaa 141  Q
    |||||||||||||||||||||    
T  34176561 tccatccaaacacaccataaa 34176581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 14515598 - 14515713
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||||||| ||||||||||| || ||||||||||| ||||| | | ||||||||||||||||  |||||  |||| | ||||||||||||||||      
T  14515598 atttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccc 14515697  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  14515698 tccatccaaacacacc 14515713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 19278138 - 19278039
Alignment:
Q  34 atatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 133  Q
    |||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||  || | | ||||||||||||||||  |||||||||||||    
T  19278138 atatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 4097628 - 4097559
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 91  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||| ||||||||    
T  4097628 tttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaagtaa 4097559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 10348914 - 10348850
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 86  Q
    |||||| | |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  10348914 tttatcgtattaatatgttaactttttaaaagatatttcatattatccgtaatttaaaaatgaaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 2900038 - 2900109
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||||||    
T  2900038 tttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaac 2900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 665958 - 665843
Alignment:
Q  21 atttatcatgttaatatgttaac-tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaact 119  Q
    ||||||||||||||||||||||  ||||||||| | |||||||| ||| | ||||||||||||||||| | |||  |||| || |||||||||||||||     
T  665958 atttatcatgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaacc 665859  T
Q  120 ttccatccaaacacacc 136  Q
     | ||||||||||||||    
T  665858 ct-catccaaacacacc 665843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 16738110 - 16737998
Alignment:
Q  24 tatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcc 123  Q
    |||||||||| ||| |||| || | |||||| |||||||||| ||| ||||||||||| ||||||||||  ||||| || ||||| ||| |||||  |||    
T  16738110 tatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaatcttcccctctcttcctctcttaaaccctcc 16738011  T
Q  124 atccaaacacacc 136  Q
    |||||||||||||    
T  16738010 atccaaacacacc 16737998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 31849238 - 31849305
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 89  Q
    ||||||| ||||||||||||| ||||||||| | |||| ||||| |||||||||||||||||||||||    
T  31849238 tttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagt 31849305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 10818300 - 10818231
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| ||||| |||||| |||| ||||||||||||||||||  || |||||||||||||    
T  10818300 tccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacacc 10818231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 26318477 - 26318546
Alignment:
Q  66 atccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    |||| ||||||||||| ||||||||||  ||||| |||||| |||||||||||| |||||||||||||||    
T  26318477 atccataatttaaaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaacacac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 9298625 - 9298685
Alignment:
Q  34 atatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||  |||||||| | |||||||||||||| ||||||||||||    
T  9298625 atatgttaactttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaac 9298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 19278211 - 19278278
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||||||||||||| ||||| |||||  |||| ||||||||||||||||||| || ||||||||||||    
T  19278211 tccgtaatttaaaaaagaaaa-taaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 1395763 - 1395834
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||||||| ||||||||||| ||||||||||| |||  | ||| |  |||||||||||||||||||||||    
T  1395763 atttatcatgctaatatgttaattttttaaaaaacattctacagtgttagtaatttaaaaatgaaaagtaaa 1395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 30850028 - 30849960
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||||||||| ||| ||||  ||||||||||||||| ||||||| ||||||||||||| |||| |||||    
T  30850028 tttatcatgttattattttaa--ttttaaaaaatattttatagtatgcgtaatttaaaaacgaaatgtaaa 30849960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 7776046 - 7775996
Alignment:
Q  39 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 89  Q
    ||||||||||||||||||||| ||||| | |||||||| ||||||||||||    
T  7776046 ttaactttttaaaaaatattttatagtgttcgtaattttaaaatgaaaagt 7775996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 14515544 - 14515475
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||  ||||  |||| ||||||||||||||||||  || |||||||||||||    
T  14515544 tccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 14515475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 2892719 - 2892650
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||||||||| ||| |||| |||||||||||||| ||||||| | |||||||||| ||  |||||||||    
T  2892719 tttatcatgttattattttaa-tttttaaaaaatatctcatagtgtgcgtaatttaacaacaaaaagtaaa 2892650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 23091129 - 23091195
Alignment:
Q  65 tatccgtaatttaaaaat-gaaaagtaaacattcccatcccttcccctcctaaactttccatccaaa 130  Q
    |||||||||||||||||  ||||||||| |  |||| ||||||||||||||||||  ||||||||||    
T  23091129 tatccgtaatttaaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 31799070 - 31799120
Alignment:
Q  44 tttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||| |||| ||| ||||||||||||||||| |||||||||||    
T  31799070 tttttaaaaaattattttataatatccgtaatttaaaaaagaaaagtaaac 31799120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 2892959 - 2892890
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 91  Q
    |||||||||||| ||| |||  || ||| ||||||||||||||| | |||||||||||||  ||||||||    
T  2892959 tttatcatgttattattttactttcttacaaaatatttcatagtgtgcgtaatttaaaaacaaaaagtaa 2892890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 21607020 - 21607085
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    |||||||||||| |||| ||||||||||   || |||||||||||||||  || ||||||||||||    
T  21607020 gtaatttaaaaacgaaatgtaaacattcatctctcttcccctcctaaaccctcaatccaaacacac 21607085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 4097686 - 4097754
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||||||||||||| ||||||| |||  | || |||||||||||| |||||  || ||||||||||||    
T  4097686 tccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 13583846 - 13583890
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagt 65  Q
    |||||| ||||||| ||||||| ||||||||||| ||||||||||    
T  13583846 atttattatgttaacatgttaattttttaaaaaacatttcatagt 13583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 23091037 - 23090997
Alignment:
Q  96 tcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||| |||||||||||||||||| ||| |||||||||||||    
T  23091037 tcccctcccttcccctcctaaaccttcaatccaaacacacc 23090997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 41110437 - 41110318
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||||   |    
T  41110437 tttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaatcct 41110338  T
Q  122 ccatccaaacacaccataaa 141  Q
    ||||||||||||||||||||    
T  41110337 ccatccaaacacaccataaa 41110318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 24560345 - 24560459
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||  |||||||| ||||||||||||||  |    
T  24560345 tttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccct 24560444  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  24560445 ccatccaaacacacc 24560459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 18654717 - 18654597
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||||||||||||||||||| || ||||||||||| ||||  ||||||||||||||||||||  |||||  ||||||| ||| |||||||||||      
T  18654717 atttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccc 18654618  T
Q  121 tccatccaaacacaccataaa 141  Q
    |||||||||||||||| ||||    
T  18654617 tccatccaaacacaccctaaa 18654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 52474043 - 52474139
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 118  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||  |||  ||||||||||||||||||    
T  52474043 tttatcatattaatatgttaactttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaac 52474139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 41040066 - 41039947
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||| |||||| ||||   | |  || ||||||||||||||| ||    
T  41040066 tttatcatgttaatatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaattaaagcctacgctctcttcccctcctaaacctt 41039967  T
Q  122 ccatccaaacacaccataaa 141  Q
    ||||||||||||||| ||||    
T  41039966 ccatccaaacacaccctaaa 41039947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 28581291 - 28581189
Alignment:
Q  33 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 132  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||  |||| |||||||| || ||||||  ||||||||||||    
T  28581291 aatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaaca 28581192  T
Q  133 cac 135  Q
    |||    
T  28581191 cac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 36569019 - 36568906
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||| ||||| |||||||||| | || |||||||||||||||| |||||  |||| ||| |||| |||||||||  |    
T  36569019 tttatcatgttaatatgttaactttttgaaaaacatttcatagtgttcgaaatttaaaaatgaaaa-taaactctcccctccattccactcctaaaccct 36568921  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  36568920 ccatccaaacacacc 36568906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 37102264 - 37102194
Alignment:
Q  23 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  37102264 ttattatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 37102194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 9312587 - 9312522
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    |||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  9312587 tttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaatgaaaa 9312522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 37807208 - 37807321
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccctt-cccctcctaaactt 120  Q
    |||||||||||||||| |||||||||||||||| |||||||||| |||  |||||||||| ||||||||||||||  | || ||| ||||||||||||      
T  37807208 tttatcatgttaatatattaactttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaagtaaacattgtcctctcttccccctcctaaaccc 37807307  T
Q  121 tccatccaaacaca 134  Q
    ||||| ||||||||    
T  37807308 tccattcaaacaca 37807321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 46556277 - 46556369
Alignment:
Q  26 tcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaact 119  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||  |||| ||| |||| ||||||||||    
T  46556277 tcatgttaatatcttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaac-ctcccctccattcctctcctaaact 46556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 25655087 - 25654991
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 117  Q
    ||||||||| |||||||||||||| || |||||| ||||| |||| | |||||| ||||||||||||||||||  |||| |||||||||||||||||    
T  25655087 atttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 220513 - 220442
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||| ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||    
T  220513 tttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaac 220442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 30200204 - 30200133
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||| |||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  30200204 tttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 30200133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 16275821 - 16275707
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||| |||||||||||| |||| |||||||| | |||| |||||||||||||| ||| |||  |||| |||||| ||||  |||||  |    
T  16275821 tttatcatgttaataagttaactttttataaaacatttcataatgtccgaaatttaaaaatgaatagtgaactctcccctccctttcccttataaaccat 16275722  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  16275721 ccatccaaacacacc 16275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 21773910 - 21773981
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||| |||||||||||||||||||||| ||||| |||| | |||||||||||||| ||||||||||    
T  21773910 tttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaac 21773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 27542047 - 27541937
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||  ||||||| || ||||||||||| ||  |||||||||||||||| || |||  || | ||||||||||||||||||  |    
T  27542047 tttatcatgttaatatgttagatttttaacaagtatttcatagtgtctctaatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccct 27541948  T
Q  122 ccatccaaaca 132  Q
    | |||||||||    
T  27541947 caatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 10748407 - 10748299
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |  |||||||||||||||     ||||||  ||   ||||||||||||||||||      
T  10748407 atttatcatgttaatatgttaactttttaaaaaacattttataatgcccgtaatttaaaaat-----gtaaactctcttctcccttcccctcctaaaccc 10748313  T
Q  121 tccatccaaacaca 134  Q
    ||||||||||||||    
T  10748312 tccatccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 34641163 - 34641232
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| ||||||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  34641163 tccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacacc 34641232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 43005855 - 43005804
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatt 75  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||||||    
T  43005855 tttatcatattaatatgttaactttttaaaaaatatttcata--atccgtaatt 43005804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 52185144 - 52185207
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    |||||||||||||||||||||||||||| |||||||||  |||| ||| |||||||||||| ||||    
T  52185144 tttatcatgttaatatgttaactttttataaaatattt--tagtgtccataatttaaaaataaaaa 52185207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 17474301 - 17474209
Alignment:
Q  44 tttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    |||||||||||| |||| ||| | ||||||||||||||| ||||||||||| || ||||  ||| |||||||||||  || ||||||||||||    
T  17474301 tttttaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaacttttccattactttccctcctaaaccctcaatccaaacacac 17474209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 24253895 - 24253970
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaa-cattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 142  Q
    ||||||||||||||| |||||||||| | ||||| ||||||||||| ||||||  |||||||||||||||| |||||    
T  24253895 tccgtaatttaaaaaagaaaagtaaatccttccc-tcccttccccttctaaaccctccatccaaacacaccctaaaa 24253970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 26135952 - 26136044
Alignment:
Q  49 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    ||||| ||||| ||| | ||||||||||||||| |||||||||||  |||  ||||||||||||||||||  ||||| ||| |||||| ||||    
T  26135952 aaaaattattttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccattcaatcacaccttaaa 26136044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 2387876 - 2387817
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 81  Q
    |||||||||||| ||| ||||||| |||||||| ||| |||||| |||||||||||||||    
T  2387876 tttatcatgttattattttaacttattaaaaaacattccatagtgtccgtaatttaaaaa 2387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 14898044 - 14897981
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 133  Q
    |||||||||||| ||||||||||  ||||  ||||||||||||||||||| || ||||||||||    
T  14898044 gtaatttaaaaaagaaaagtaaaatttcctctcccttcccctcctaaactctcaatccaaacac 14897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 220570 - 220644
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    ||||||||||||||| ||||||||||   |||| ||||||| ||||||||||  |||||||||||| ||| ||||    
T  220570 tccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccctaaa 220644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 17474356 - 17474446
Alignment:
Q  44 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 134  Q
    |||||||||||||||| | | ||| |||||||||||||  |||||| |||  |||| |||||||||||||| |||  || |||||||||||    
T  17474356 tttttaaaaaatattttacattattcgtaatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 28582682 - 28582732
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 117  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||||||||    
T  28582682 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 28582732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 40463987 - 40463874
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||| | | ||||  |||||||||| | || ||||| |||||||||||||||||||||||| ||| || ||||  ||  |||| |||||  |    
T  40463987 tttatcatgttattgttttaatattttaaaaaacaatttatagtgtccgtaatttaaaaatgaaaagtacacactctcatcgtttatcctcataaaccct 40463888  T
Q  122 ccatccaaacacac 135  Q
     |||||||||||||    
T  40463887 tcatccaaacacac 40463874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 41110494 - 41110563
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| ||||||||||| ||||  ||||||||||||  ||||  || |||||||||||||    
T  41110494 tccgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacacc 41110563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 55327498 - 55327563
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    ||||| ||||||||| | ||||||||||||||| |||||||| | ||||| ||||||||| |||||    
T  55327498 tttattatgttaatacgctaactttttaaaaaacatttcataatgtccgtgatttaaaaacgaaaa 55327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 13082943 - 13082856
Alignment:
Q  49 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||| |||||||||| |||||| ||||||||| |||| ||||| ||||  || ||| | || ||||||  ||||||||||||||||    
T  13082943 aaaaaacatttcatagtgtccgtattttaaaaataaaaattaaaccttcctctctctttctcttctaaaccctccatccaaacacacc 13082856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 55428552 - 55428619
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 134  Q
    ||||||||||||| | ||||||||||   |||| ||||||||||||||||||  || |||||||||||    
T  55428552 tccgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 23028086 - 23028168
Alignment:
Q  54 atatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||| |||||||||||||||| ||||||||    | || ||  ||||||||| ||||  ||||||||||||||||    
T  23028086 atatttcatagtgtccgtaatttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacacacc 23028168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 6803377 - 6803442
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    |||||||||||| ||||| |||||  || | || ||||||||||||||| ||| ||||||||||||    
T  6803377 gtaatttaaaaaagaaaattaaactctctcctctcttcccctcctaaaccttcaatccaaacacac 6803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 21773853 - 21773788
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 132  Q
    ||||||||||| ||| |||||||| ||  | || |||||||||||||||||| ||| |||||||||    
T  21773853 tccgtaatttagaaaagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaaca 21773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 24560288 - 24560219
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||  ||||  |||| ||||||||||||||||||  |  |||||||||||||    
T  24560288 tccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 24560219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 30200264 - 30200312
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctccta 115  Q
    ||||||||||||||| |||||||||||  | || |||||||||||||||    
T  30200264 tccgtaatttaaaaaagaaaagtaaacccttccctcccttcccctccta 30200312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 8529927 - 8530039
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||| |    
T  8529927 tttaccatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaactttcacctcccttcccctcctaaactct 8530026  T
Q  122 ccatccaaacaca 134  Q
     ||||||||||||    
T  8530027 tcatccaaacaca 8530039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 41498532 - 41498652
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccctt-cccctcctaaactt 120  Q
    |||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||   |||| |||||| |||||||||||||     
T  41498532 tttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaatcctcccctcccttacccctcctaaactc 41498631  T
Q  121 tccatccaaacacaccataaa 141  Q
    |||||||||||||||| ||||    
T  41498632 tccatccaaacacaccctaaa 41498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 40095049 - 40094935
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||  |||| | ||||||||||||||||  |    
T  40095049 tttatcatgttaatttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccct 40094950  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  40094949 ccatccaaacacacc 40094935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 12234144 - 12234257
Alignment:
Q  28 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 127  Q
    ||||||||||| ||||||| ||||||| ||||| |||| ||||||||||||||||||||| |||||  |||| ||||||||||||||||||  |||||||    
T  12234144 atgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatcc 12234243  T
Q  128 aaacacaccataaa 141  Q
    ||||||||||||||    
T  12234244 aaacacaccataaa 12234257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 30010460 - 30010574
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||| ||||||||||||||||| ||||||||| ||||| |||| |||||||||| ||||||||||||||||  |||| ||||||||||| ||||||  |    
T  30010460 tttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccct 30010559  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  30010560 ccatccaaacacacc 30010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 38510010 - 38509891
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||| |||||| ||||||| ||||||||| | |||||||||| ||||||||||||||||||||||| |||  |||  ||||||||||||||||||  |    
T  38510010 tttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccct 38509911  T
Q  122 ccatccaaacacaccataaa 141  Q
    | ||||||||||||| ||||    
T  38509910 ctatccaaacacaccctaaa 38509891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 43552108 - 43551993
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||||||||| ||||||||     ||||||||||||||||||| |||||  || ||||| ||| || ||||||| ||    
T  43552108 tttatcatgttaatatgttaactttttaaaaaacatttcata----acgtaatttaaaaatgaaaaataaaccctcacatcctttcgccgcctaaacctt 43552013  T
Q  122 ccatccaaacacaccataaa 141  Q
    ||||||||||||||| ||||    
T  43552012 ccatccaaacacaccctaaa 43551993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 35349578 - 35349468
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||||| |||| |||||  ||| |||||||||||||||||||||||||||  ||||  ||| ||||||| |||||  |    
T  35349578 tttatcatgttaatatgttaactttttataaaacatttc--agtgtccgtaatttaaaaatgaaaagtaaaccctccc--cccctcccctcttaaaccct 35349483  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  35349482 ccatccaaacacacc 35349468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 2859048 - 2858934
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||| |||| | ||||||||||||||||| || |||||||||  || |||||||| |||||||||||||||  |||| |||||| |||||||||||  |    
T  2859048 tttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccct 2858949  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  2858948 ccatccaaacacacc 2858934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 20576247 - 20576136
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||| |||||| ||||||||| ||||||  || ||||||||||||||||||||  |||||  |||| ||||||||||||||||||  |    
T  20576247 tttatcatgttaatatattaactctttaaaaaacatttca--gtgtccgtaatttaaaaatgaaatctaaactctcccctcccttcccctcctaaaccct 20576150  T
Q  122 ccatccaaacacac 135  Q
    | ||||||||||||    
T  20576149 ctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 7444623 - 7444736
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||| ||||||||||||||||||||||||||  |||| ||||| |||||||||| |||||||||| |||||  |||| || |||||| | ||||||| |    
T  7444623 tttattatgttaatatgttaactttttaaaaatcattttatagtgtccgtaattttaaaatgaaaactaaaccctcccctctcttccctttctaaactct 7444722  T
Q  122 ccatccaaacacac 135  Q
     |||||||||||||    
T  7444723 tcatccaaacacac 7444736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 32951434 - 32951366
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagta 90  Q
    |||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||    
T  32951434 tttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaagta 32951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 49946705 - 49946633
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| || |||||    
T  49946705 atttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaac 49946633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 36285690 - 36285619
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||| || |||||    
T  36285690 tttatcatgttaatatgttaactttttaaaaaatattttatagtgttcgtaatttaaaaatgataaataaac 36285619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 28770852 - 28770969
Alignment:
Q  23 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttc 122  Q
    |||||||||||||||||||| |||||| |||| |||||||| | |  ||||||||||||| |||| |||||  |||  ||| || ||||||||||| |||    
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcataatgt--gtaatttaaaaataaaaaataaaccctccactccttttccctcctaaaccttc 28770949  T
Q  123 catccaaacacaccataaaa 142  Q
    |||||||||||||| |||||    
T  28770950 catccaaacacaccctaaaa 28770969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 50744397 - 50744332
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaa 86  Q
    ||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||    
T  50744397 tttatcatgttaatatgttaactctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 50744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 6563704 - 6563775
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||| ||||||| |||||||||| |||||||| |||   |||||||||||||||||||||    
T  6563704 tttatcatgttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 6563775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 32951491 - 32951566
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 142  Q
    ||||||||||||||| |||||||||||  |||| |||||||| |||||||||| || ||||||||||||| |||||    
T  32951491 tccgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccctaaaa 32951566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 45585801 - 45585739
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatga 84  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||||  ||||||||||||||    
T  45585801 tttatcatgttaatatgttaacttttaaaaaaacattttatagtatctataatttaaaaatga 45585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 51597796 - 51597866
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||||| |||||||||||||||||||||||  |||||||||| | | |||||||||| |||||||||||    
T  51597796 tttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagtaaa 51597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 40964726 - 40964798
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaa-aatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||| |||||||||||||||||| |||| ||||||| |  || |||||||||||||||||||||||||||    
T  40964726 tttatcacgttaatatgttaacttttaaaaaaaatatttgacggtgtccgtaatttaaaaatgaaaagtaaac 40964798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 2859105 - 2859169
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaac 131  Q
    |||||||||||||||  ||||||||||  |||| |||||||||||||||||| ||| ||||||||    
T  2859105 tccgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 10392000 - 10392072
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||||||||  |||| ||| | |  |||||||||||| |||||||||||    
T  10392000 tttatcatgttaatatgttaactttttaaaaaaacatttaataatgtttgtaatttaaaaacgaaaagtaaac 10392072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 23536844 - 23536777
Alignment:
Q  74 tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    |||||||  ||||| |||||| |||||||||||| |||||||||   |||||||||||||||||||||    
T  23536844 tttaaaatagaaaattaaacactcccatcccttctcctcctaaatcctccatccaaacacaccataaa 23536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 26940953 - 26940874
Alignment:
Q  28 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttc 107  Q
    ||||||||| |||||||||| || |||||||||||||| ||  |||||||||||| |||||| |||  ||||||| ||||    
T  26940953 atgttaataagttaacttttaaacaaatatttcatagtgtctataatttaaaaataaaaagtgaaccctcccatctcttc 26940874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 35349635 - 35349709
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||| |||||  |  ||||||||||||| ||||    
T  35349635 tccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccctaaa 35349709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 41676407 - 41676480
Alignment:
Q  22 tttatcatgttaatatgttaactt--tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||||||||| ||     |||||| |||| ||||| |||||||||||||||||||||||||||    
T  41676407 tttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaac 41676480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 30010403 - 30010334
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||| | ||||||||||   |||| ||||||||||||||||||  || |||||||||||||    
T  30010403 tccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacacc 30010334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 41498471 - 41498406
Alignment:
Q  71 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||| |||||||||||  |||| || |||||||||||||||  || |||||||||||||    
T  41498471 taatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacacc 41498406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 2470819 - 2470727
Alignment:
Q  49 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    |||||| |||| ||||| | ||||||||||||||| |||  ||||  |||  || |||||||||||||||  |||||||||||||||| ||||    
T  2470819 aaaaaacattttatagtgttcgtaatttaaaaatgtaaacgaaaccctccattctcttcccctcctaaaccctccatccaaacacaccctaaa 2470727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 2506689 - 2506781
Alignment:
Q  44 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||| ||||| ||| |||| |||||||||||| ||||| |||    || | |||||||| || ||||||| ||||||||||||||||    
T  2506689 tttttaaaaattattttataatatctgtaatttaaaaaagaaaactaagtcatctcctcccttcctcttctaaactctccatccaaacacacc 2506781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 35512974 - 35513037
Alignment:
Q  71 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 134  Q
    |||||||||||  |||||||| |  |||| ||||||||||||||||||  ||||||||||||||    
T  35512974 taatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 10391943 - 10391893
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 117  Q
    |||||||||||||||||||||||||||  |||| ||  |||||||||||||    
T  10391943 tccgtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaa 10391893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 12234081 - 12233999
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaacaaccat 149  Q
    ||||||||||||||| ||||| ||| |  | || ||||||||||||||||||  || ||||||||||||| | ||| ||||||    
T  12234081 tccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacacccttaaaaaaccat 12233999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 20607410 - 20607459
Alignment:
Q  87 agtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||  |||| ||||||||||||||||||  ||||||||||||||||    
T  20607410 agtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 20607459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 25268437 - 25268510
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataa 140  Q
    ||||||||||||||| | |||||||||  |||| || |||||||| ||||||  |||||||||| | |||||||    
T  25268437 tccgtaatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccctccatccaaatataccataa 25268510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 40709391 - 40709294
Alignment:
Q  39 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||| ||| |||||| ||||| ||| ||| ||||||||||||| |||||||||    |||  |||||||||||| ||||| ||  |||||||||||||    
T  40709391 ttaattttctaaaaattattttataatattcgtaatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacacc 40709294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 7444549 - 7444481
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||||||||||||| |||||||||||  |||| ||||||| ||||| ||||  || |||| |||||||    
T  7444549 tccgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacac 7444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 38510067 - 38510135
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    |||||| |||||||| ||||| |||||  |||| ||||||||||||||||||  |  ||||||||||||    
T  38510067 tccgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 39304 - 39182
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccca-tcccttcccctcctaaact 119  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||||  ||  ||||||||||||||     
T  39304 atttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaacc 39205  T
Q  120 ttccatccaaacacaccataaaa 142  Q
     |||||||||||||||| |||||    
T  39204 ctccatccaaacacaccctaaaa 39182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 39363 - 39432
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||||||||  |||| |||||| |||| ||||||  || |||||||||||||    
T  39363 tccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacacc 39432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 18231714 - 18231828
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||||||||||   |||| ||||||||||||||||||  |    
T  18231714 tttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgct 18231813  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  18231814 ccatccaaacacacc 18231828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 4833647 - 4833537
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||| |||||||||||| |||| |||||||||| || ||||||||||||||||||||||||  |||| ||||||||||||||||||  |    
T  4833647 tttatcatgttaataggttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccct 4833548  T
Q  122 ccatccaaaca 132  Q
    |||||||||||    
T  4833547 ccatccaaaca 4833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 24970281 - 24970187
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| | |||||||||||||||    
T  24970281 tttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaatcatcccct-ccttcccctcctaaa 24970187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 41497074 - 41496959
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||||||||||||||||| ||||||||||| ||||| || | |||||||||||||||| |||||||||   |||| ||||||||||||||||||      
T  41497074 atttatcatgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccc 41496975  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  41496974 tccatccaaacacacc 41496959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 47390984 - 47391098
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||||  ||||  |||| |||||||||||| |||||  |    
T  47390984 tttatcatgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccct 47391083  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  47391084 ccatccaaacacacc 47391098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 33655225 - 33655153
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  33655225 atttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 33655153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 10315761 - 10315872
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||| |||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||| ||||    ||  |||||||||||||||||| ||    
T  10315761 tttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaaaatgaaaaataaatcaccctctcccttcccctcctaaacctt 10315860  T
Q  122 ccatccaaacac 133  Q
    ||||||||||||    
T  10315861 ccatccaaacac 10315872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 40196648 - 40196534
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||| ||| |||||||||||||||| |||| |||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||||| ||||  |    
T  40196648 tttatcaggttgatatgttaactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccct 40196549  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  40196548 ccatccaaacacacc 40196534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 42306466 - 42306571
Alignment:
Q  30 gttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaa 129  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||  |||| ||  ||||||||||||||  || ||||||    
T  42306466 gttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaa 42306565  T
Q  130 acacac 135  Q
    ||||||    
T  42306566 acacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 45940771 - 45940658
Alignment:
Q  23 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttc 122  Q
    |||| ||||||||||  || |||| ||||||| |||||||||| |||||||| ||||||| |||||||||| || || ||||||||||| |||||| |||    
T  45940771 ttattatgttaatatactatctttgtaaaaaacatttcatagtgtccgtaatataaaaataaaaagtaaactttgccctcccttccccttctaaaccttc 45940672  T
Q  123 catccaaacacacc 136  Q
    ||||||||||||||    
T  45940671 catccaaacacacc 45940658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 34235123 - 34235053
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||||| ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  34235123 tttatcatattaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaa 34235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 13771062 - 13770945
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||||| ||  ||||| ||||| |||||||||||||||| | |||||||   |||| |||||||||||||||||   |    
T  13771062 tttatcatgttaatatgttaactttttataa--tattttatagtgtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcct 13770965  T
Q  122 ccatccaaacacaccataaa 141  Q
    | ||||||||||||| ||||    
T  13770964 caatccaaacacaccctaaa 13770945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 32872897 - 32872826
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||| |||||||||||    
T  32872897 tttatcatgttaatatgttaactttttaaaaagtattttataatattcgtaatttaaaaaagaaaagtaaac 32872826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 13425236 - 13425122
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||| |||||| |||||||||||  |||| || ||||||||||||| |||| |||||  |||  | ||||||||||||||||  |    
T  13425236 tttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaatttaaaaataaaaaataaaccatcctcttccttcccctcctaaaccct 13425137  T
Q  122 ccatccaaacacacc 136  Q
    | |||||||||||||    
T  13425136 ctatccaaacacacc 13425122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 40572350 - 40572287
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 86  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  40572350 tttatcatgttaatatgttaactttt-aaaaaatattttatagcatccgtaatttaaaaatgaaa 40572287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 25887320 - 25887417
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 118  Q
    |||||||| ||||||||||||||||| ||||||  |||||||  | | |||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  25887320 tttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgtaaactctcccctcccttcccctcctaaac 25887417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 43230364 - 43230476
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||| |||||| | |||| ||| |||||||||||||||| ||||||||||  |||| | | |||| ||| |||||  |    
T  43230364 tttatcatgttaatatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaaactctccccttctttcctctcataaaccct 43230462  T
Q  122 ccatccaaacacac 135  Q
     |||||||||||||    
T  43230463 acatccaaacacac 43230476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 1051614 - 1051520
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 118  Q
    |||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||| || |||  |||| ||  ||||||||||||||    
T  1051614 tttatcatgt-aatatgttaactttttaaaaaacatttcat-gtgtccgtaatttaaaaatgaaatgttaaccctcccctctattcccctcctaaac 1051520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 48881646 - 48881560
Alignment:
Q  50 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||| ||||| ||| | ||||||||||||||| ||||||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  48881646 aaaattattttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacacc 48881560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 39856038 - 39856107
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||||    
T  39856038 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 39856107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 41008309 - 41008425
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaa--aatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaact 119  Q
    |||||||||||||||||||||||||| || |  || |  |||||||||||||||||||||||||||| ||||||  ||   | ||||||||||||||||     
T  41008309 tttatcatgttaatatgttaacttttgaagacaaaaaaatcatagtatccgtaatttaaaaatgaaatgtaaac--tc---ttccttcccctcctaaacc 41008403  T
Q  120 ttccatccaaacacaccataaa 141  Q
     | |||||||||||||| ||||    
T  41008404 ctgcatccaaacacaccctaaa 41008425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 36267635 - 36267555
Alignment:
Q  56 atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||| ||| ||||||||||||||||| ||||| ||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  36267635 attttataatatccgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacacc 36267555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 22163225 - 22163167
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 81  Q
    |||||||||||||||||||| |||| ||||||| |||||||||| |||||||||||||||    
T  22163225 tttatcatgttaatatgtta-ctttctaaaaaacatttcatagtgtccgtaatttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 22221933 - 22221875
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 81  Q
    |||||||||||||||||||| |||| ||||||| |||||||||| |||||||||||||||    
T  22221933 tttatcatgttaatatgtta-ctttctaaaaaacatttcatagtgtccgtaatttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 31571643 - 31571712
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||||||||  |||| || |||||||||||||||  || |||||||||||||    
T  31571643 tccgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacacc 31571712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 19835838 - 19835906
Alignment:
Q  23 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 91  Q
    |||| |||||| ||| |||| |||||||| || |||| ||||| |||||||||||||||||||||||||    
T  19835838 ttatgatgttattattttaattttttaaagaacattttatagtttccgtaatttaaaaatgaaaagtaa 19835906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 31553287 - 31553182
Alignment:
Q  33 aatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 132  Q
    |||||||||||||||||||||| |||||||| | ||||| |||| ||||| ||||||  ||  || | ||||||||||||||||||  ||||||||||||    
T  31553287 aatatgttaactttttaaaaaacatttcataatgtccgttattt-aaaattaaaagt-gaccctctcctcccttcccctcctaaac-ctccatccaaaca 31553191  T
Q  133 caccataaa 141  Q
    |||| ||||    
T  31553190 caccctaaa 31553182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 47229948 - 47229888
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaat 82  Q
    |||||||||||||||||||  |||||||| |||||||||||| || ||||| |||||||||    
T  47229948 tttatcatgttaatatgttcgctttttaagaaatatttcataatacccgtagtttaaaaat 47229888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 33519224 - 33519290
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||| | ||||||||| |  |||| ||||||||||||||||||  ||||||||||||||||    
T  33519224 gtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacacc 33519290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 13771119 - 13771188
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||||||||  || | ||||||||||||||||||  || ||| |||||||||    
T  13771119 tccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacacc 13771188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 28074174 - 28074105
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| ||||||| |    |||| |||||||||||||||||| ||| |||||||||||||    
T  28074174 tccgtaatttaaaaaagaaaagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacacc 28074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 30592372 - 30592255
Alignment:
Q  19 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 118  Q
    ||||||||||| | | ||| | || ||||||||||  |||| ||||| || |||||||||||| ||||||||| |  |||| |||||| ||||||||||     
T  30592372 ttatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctcccttccctttccctcctaaat 30592273  T
Q  119 tttccatccaaacacacc 136  Q
      |||||||||| |||||    
T  30592272 cctccatccaaatacacc 30592255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 34228492 - 34228561
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||| |||||||||||||||   |||| ||||||| |||||||||| ||| || ||||||||||    
T  34228492 tccgtaattttaaaatgaaaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaacacacc 34228561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 2087833 - 2087786
Alignment:
Q  44 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 91  Q
    |||||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  2087833 tttttaaaaattattttataatatccgtaatttaaaaaagaaaagtaa 2087786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 30891078 - 30891039
Alignment:
Q  54 atatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  30891078 atattttatagtgtccgtaatttaaaaatgaaaagtaaac 30891039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 37417749 - 37417706
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagt 65  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||    
T  37417749 tttatcatgtgaatatgttaactttttagaaaacatttcatagt 37417706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 37925910 - 37925843
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||||  |||||| |||  |||| ||||||||||||||||||  || |||||||||||||    
T  37925910 cgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 37925843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 47390922 - 47390852
Alignment:
Q  71 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    ||||||||||| |||||||||||  |||  |||||||||||||||| |  || ||||||||||||| ||||    
T  47390922 taatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccctaaa 47390852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 17852999 - 17853067
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 91  Q
    |||||||||||  ||| ||| ||||||||||| | |||||||||   |||||||||||||||||||||||    
T  17852999 tttatcatgttgttattttatctttttaaaaact-tttcatagtgctcgtaatttaaaaatgaaaagtaa 17853067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 26365900 - 26366009
Alignment:
Q  26 tcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccat 125  Q
    |||||||| ||| |||| |||  |||||||||||  |||||||| ||||||||||| |||||  ||||  |||| || |||||| || |||||  ||| |    
T  26365900 tcatgttattattttaattttaaaaaaaatattttgtagtatccataatttaaaaacgaaaatcaaactatcccctctcttcccatcttaaaccctccgt 26365999  T
Q  126 ccaaacacac 135  Q
    ||||||||||    
T  26366000 ccaaacacac 26366009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 34228433 - 34228364
Alignment:
Q  23 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    ||||||| |||||||||||||||||| | |||   |||||||| |||||||||  |||||| ||||||||    
T  34228433 ttatcatattaatatgttaacttttttataaaacattcatagtgtccgtaattacaaaatgtaaagtaaa 34228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 42087131 - 42087188
Alignment:
Q  30 gttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    ||||||||| |||||||||||||||  ||  ||| || ||||||||||||||||||||    
T  42087131 gttaatatgctaactttttaaaaaactttgtataatacccgtaatttaaaaatgaaaa 42087188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 33655285 - 33655349
Alignment:
Q  71 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||||||||| |||||||||||  || | || |||||||||||||||  || ||||||||||||    
T  33655285 taatttaaaaaagaaaagtaaaccctcgcctctcttcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 94
Target Start/End: Original strand, 34235180 - 34235208
Alignment:
Q  66 atccgtaatttaaaaatgaaaagtaaaca 94  Q
    |||||||||||||||||||||||||||||    
T  34235180 atccgtaatttaaaaatgaaaagtaaaca 34235208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 13634839 - 13634953
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| |  |||| ||||||||||||||||||  |    
T  13634839 tttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccct 13634938  T
Q  122 ccatccaaacacacc 136  Q
    | |||||||||||||    
T  13634939 caatccaaacacacc 13634953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 10650544 - 10650661
Alignment:
Q  24 tatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcc 123  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||| ||| | ||||||||||||| ||||||||     
T  10650544 tatcatggtaatatgttaactttttataaaacatttcatagtatccgtaatttaaaaacaaaaagtaaactttctcctcccttcccctcccaaactttca 10650643  T
Q  124 atccaaacacaccataaa 141  Q
    ||||||||||||| ||||    
T  10650644 atccaaacacaccctaaa 10650661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 1657955 - 1658055
Alignment:
Q  36 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||  |||||||||||||||    
T  1657955 atgttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 1658054  T
Q  136 c 136  Q
    |    
T  1658055 c 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 7544264 - 7544383
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||  ||||  |||| | ||||||||||||||||  |    
T  7544264 tttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaaccct 7544363  T
Q  122 ccatccaaacacaccataaa 141  Q
    ||||||||||||||| ||||    
T  7544364 ccatccaaacacaccttaaa 7544383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 14245204 - 14245090
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||| ||||||||||   |||| ||||||||||||||||||  |    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccct 14245105  T
Q  122 ccatccaaacacacc 136  Q
    | |||||||||||||    
T  14245104 caatccaaacacacc 14245090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 8502949 - 8502837
Alignment:
Q  24 tatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttcc 123  Q
    |||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||  |||||||| ||||| || |||||  |||    
T  8502949 tatcatattaatttgttaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatcc 8502850  T
Q  124 atccaaacacacc 136  Q
    |||||||||||||    
T  8502849 atccaaacacacc 8502837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 36363160 - 36363271
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||| ||||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||| |||  || | ||||||||||||||||||  |    
T  36363160 tttatcatgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccct 36363259  T
Q  122 ccatccaaacac 133  Q
    ||||||||||||    
T  36363260 ccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 37607022 - 37607136
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||  ||   |||||| ||||| |||||  |    
T  37607022 tttatcatgttaatatgttaactttttataaaacatttcatagtatctgtattttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccct 37607121  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  37607122 ccatccaaacacacc 37607136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 37779231 - 37779345
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||  ||   |||||| ||||| |||||  |    
T  37779231 tttatcatgttaatatgttaactttttataaaacatttcatagtatctgtagtttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccct 37779330  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  37779331 ccatccaaacacacc 37779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 16938606 - 16938721
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||| || |||||||||||||||||  |||||  |||| ||| |||| |||||||||      
T  16938606 atttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaaaccctcccctccattcctctcctaaaccc 16938705  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  16938706 tccatccaaacacacc 16938721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 26415021 - 26415136
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccctt-cccctcctaaactt 120  Q
    |||||||||||||||||||||||||||| |||| |||||||||| || |||| |||||||||||||||||||  |||| ||| || |||||| |||||      
T  26415021 tttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaagtaaactctcccctcctttccccctcataaaccc 26415120  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  26415121 tccatccaaacacacc 26415136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 28279593 - 28279478
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||  ||| |  || ||||| ||| ||||      
T  28279593 atttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagtaaattttcaccccctttcccatcccaaaccc 28279494  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  28279493 tccatccaaacacacc 28279478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 9798724 - 9798615
Alignment:
Q  26 tcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccat 125  Q
    ||||||||| || || ||||||||||||| ||||| ||||||||||||||||||||||||||||||||  || ||||||||  |||||||||   |||||    
T  9798724 tcatgttaaaatattgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaagtaaactctcacatcccttttcctcctaaatcctccat 9798625  T
Q  126 ccaaacacac 135  Q
    ||||||||||    
T  9798624 ccaaacacac 9798615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 4373683 - 4373611
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| ||||||||||    
T  4373683 atttatcatgttaatatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagtaaac 4373611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 10476156 - 10476275
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||| ||||||||||   ||||| | ||||||||||||||   |||||||||||||| | ||||||||| |||| ||||||||||||||||||  |    
T  10476156 tttatcatcttaatatgtttttttttttataaatatttcatagtggtcgtaatttaaaaattataagtaaacactcccctcccttcccctcctaaaccct 10476255  T
Q  122 ccatccaaacacaccataaa 141  Q
    ||||||||||||||| ||||    
T  10476256 ccatccaaacacaccctaaa 10476275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 36392266 - 36392195
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||||    
T  36392266 tttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaac 36392195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 20146981 - 20146917
Alignment:
Q  23 ttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  20146981 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaaaa 20146917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 10072763 - 10072692
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |  |||||||| |||||||||||||    
T  10072763 tttatcatgttaatatgttaactttttaaaaaatatttcatagtactcacaatttaaatatgaaaagtaaac 10072692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 37551535 - 37551647
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||||| |||| |||||  ||| || ||| ||||||||||||||||||||  |||  |||||| ||||| |||||  |    
T  37551535 tttatcatgttaatatgttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccct 37551632  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  37551633 ccatccaaacacacc 37551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 37654365 - 37654477
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||||| |||| |||||  ||| || ||| ||||||||||||||||||||  |||  |||||| ||||| |||||  |    
T  37654365 tttatcatgttaatatgttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccct 37654462  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  37654463 ccatccaaacacacc 37654477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 20513561 - 20513491
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| || ||| |||||||||||||||||||    
T  20513561 tttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgtagtttaaaaatgaaaagtaaa 20513491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 43535 - 43607
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaa-tttaaaaatgaaaagtaaac 93  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||    
T  43535 tttattatgttaatatgttaacttttcaaaaaatatttcatagtgttcgtaattttaaaaatgaaaagtaaac 43607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 9857008 - 9857072
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 86  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  9857008 tttattatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaatgaaa 9857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 16501907 - 16501836
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||| |||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||| ||||    
T  16501907 atttattatgttaatatgttaacttttaaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaa 16501836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 22023495 - 22023568
Alignment:
Q  22 tttatcatgttaatatgttaac-tttttaaaaaatatttcat-agtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||| |||||||||||||||    
T  22023495 tttatcatgttaatatgttaacttttttaaaaaacatttcataaatatccgtaatttataaatgaaaagtaaac 22023568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 32727893 - 32727822
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||   |||||||||||||||||||| || ||||||||||||||| ||| ||||||    
T  32727893 tttatcatgttaatatgttcgttttttaaaaaatatttcataatacccgtaatttaaaaataaaatgtaaac 32727822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 14245202 - 14245288
Alignment:
Q  50 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||| |||||| ||| |||||||||||||||||||||  ||||  |||| ||||||||||||||||||  || |||||||||||||    
T  14245202 aaaaacatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 14245288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 11757070 - 11757144
Alignment:
Q  61 atagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||| ||||||||||||||||||||  |||||  |||| |||||||||||| |||||  |||||||||||||||    
T  11757070 atagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 17024336 - 17024270
Alignment:
Q  26 tcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    ||||||||||||| |||||||||||| || |||||||| | || | |||||||||||||||||||||    
T  17024336 tcatgttaatatgataactttttaaagaacatttcataatgtctgcaatttaaaaatgaaaagtaaa 17024270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 13634782 - 13634713
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||| ||||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||||    
T  13634782 tccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 13634713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 17780340 - 17780279
Alignment:
Q  33 aatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||||||||    
T  17780340 aatatgttaactttttaaaaaaacattttataatatccgtaatttaaaactgaaaagtaaac 17780279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 26414964 - 26414895
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||||||||  |||| ||||||| ||||||||||  || |||||||||||||    
T  26414964 tccgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacacc 26414895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 4423336 - 4423404
Alignment:
Q  19 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    |||||||| | ||||||||| ||| |||| ||||||||||||||| | | |||||||||||||||||||    
T  4423336 ttatttattacgttaatatgctaaattttaaaaaaatatttcataatgttcgtaatttaaaaatgaaaa 4423404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 10650517 - 10650427
Alignment:
Q  50 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatccc--ttcccctcctaaactttccatccaaacacaccat 138  Q
    ||||| |||||||||| |||||||||||||||| |||||||||   |||| ||||  |||||||||||||   ||||||||||| ||||||    
T  10650517 aaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcccttttcccctcctaaatcctccatccaaacgcaccat 10650427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 34980879 - 34980812
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||||| |||||| |||  | || |||||||||||||||||| ||| |||||||||||||    
T  34980879 cgtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 11419302 - 11419237
Alignment:
Q  28 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||| ||||||| ||||| |||| ||| | ||| |||||| ||||||||||||||||    
T  11419302 atgttaatatgtttacttttttaaaaacattttatattgtccttaatttgaaaatgaaaagtaaac 11419237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 2556167 - 2556215
Alignment:
Q  45 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||| |||  |||| |||||||||||||||||||||||    
T  2556167 ttttaaaaaatattttatatcatccataatttaaaaatgaaaagtaaac 2556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  75 ttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 134  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 29002322 - 29002251
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||   |||  |||||| |||| ||||| | | |||||||||||||||||||||||    
T  29002322 tttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatgaaaagtaaac 29002251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 10476090 - 10476028
Alignment:
Q  74 tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||| |||||||||||  || ||||||||||||||||||||  || || ||||||||||    
T  10476090 tttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaattcaaacacacc 10476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 33744260 - 33744190
Alignment:
Q  71 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    ||||||||||| |||||||||||  |||| ||||||| || ||| |||  |||||||||||||||| ||||    
T  33744260 taatttaaaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccctaaa 33744190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 40815365 - 40815299
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||| ||||||||||   || | |||||||||||||||||  ||| |||||||||||||    
T  40815365 gtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacacc 40815299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 16938550 - 16938481
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||| ||||||| |||||  ||||  |||| ||||||||||||||||||  || |||||||||||||    
T  16938550 tccgtaacttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacc 16938481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 2550441 - 2550397
Alignment:
Q  49 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||| || ||||||| || ||||||||||||||||||||||||    
T  2550441 aaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaaac 2550397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 45742018 - 45742132
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||| |||||| ||| |||||||  |    
T  45742018 tttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaaccct 45742117  T
Q  122 ccatccaaacacacc 136  Q
     ||||||||||||||    
T  45742118 tcatccaaacacacc 45742132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 54935197 - 54935311
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||| |||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||| |||||  |||| ||||||||||||||||||  |    
T  54935197 tttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccct 54935296  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  54935297 ccatccaaacacacc 54935311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 31348437 - 31348340
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaact 119  Q
    |||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||  | || |||||||||||| ||||||    
T  31348437 tttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacccttccctcccttcccctcataaact 31348340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 5730947 - 5730827
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||||||||||||||||||| || ||||||||||| ||||  ||||||||||||||||||||  |||||  ||||||| ||| |||||||||||      
T  5730947 atttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccc 5730848  T
Q  121 tccatccaaacacaccataaa 141  Q
    |||||||||||||||| ||||    
T  5730847 tccatccaaacacaccctaaa 5730827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 41174472 - 41174587
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||| ||| ||| ||||||||||||| |||||  |||| ||||||||||||||||||      
T  41174472 atttattatgttaatatgctaactttttaaaaaccatttcatagtgtccctaaattaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccc 41174571  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  41174572 tccatccaaacacacc 41174587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 49735584 - 49735470
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||| ||||||||||||||| | |||||||  | ||||||||||||||||||||||| |||  |||| ||||||||||||||||||  |    
T  49735584 tttatcatgttaataggttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccct 49735485  T
Q  122 ccatccaaacacacc 136  Q
    | |||||||||||||    
T  49735484 caatccaaacacacc 49735470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 54320562 - 54320676
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||| ||||  ||||  |||| ||||||||||||||||||  |    
T  54320562 tttatcatgttaatatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccct 54320661  T
Q  122 ccatccaaacacacc 136  Q
    | |||||||||||||    
T  54320662 caatccaaacacacc 54320676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 27735872 - 27735987
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||||||||||||| ||||| ||||||||| |||| ||||| ||||||||||||||||||||| | |||  |  | ||||||||||||||||||      
T  27735872 atttatcatgttaatatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccc 27735971  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  27735972 tccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 24565462 - 24565348
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||| ||||||| ||||||||||||||||  ||||| || |||||||||||||||||||||||||||||  ||||    |||||| |||||||| ||    
T  24565462 tttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaacctt 24565363  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  24565362 ccatccaaacacacc 24565348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 6938394 - 6938489
Alignment:
Q  41 aactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||| |||  |||| ||| |||||||| ||||| |||||||||||||||||    
T  6938394 aactttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacacc 6938489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 34110933 - 34111003
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  34110933 tttatcatgttaatatgttaactttttaaaaaacatttcacagtat-cgtaatttaaaaataaaaagtaaac 34111003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 37711282 - 37711371
Alignment:
Q  53 aatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 142  Q
    ||||||| ||||| ||||||||||||||||||||  |||||  |||| ||||||||||||||||||  |||||||||||||||| |||||    
T  37711282 aatattttatagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccctaaaa 37711371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 16400928 - 16400987
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 81  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  16400928 tttatcatgttaatatgttaactttttaaaaactatttcatagtgtccctaatttaaaaa 16400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 35248811 - 35248922
Alignment:
Q  19 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 118  Q
    |||||||||||||||||| |||||||||| ||||||||||    ||| ||| |||||||||| ||||||||||||  |||| ||||| || |||||||||    
T  35248811 ttatttatcatgttaatacgttaacttttaaaaaaatattcttgagtgtccataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaac 35248910  T
Q  119 tttccatccaaa 130  Q
      ||||||||||    
T  35248911 cctccatccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 31348494 - 31348563
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||| ||||||||| |||||||||||  |||| ||||||||||||||||||| || |||||||||||||    
T  31348494 tccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacacc 31348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 17938223 - 17938115
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||| ||| |||| ||||||||||| ||| |||| | ||| ||||||||||| ||||| |||||  | || ||| ||||||||||||||  |    
T  17938223 tttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaactcttccctccattcccctcctaaaccct 17938124  T
Q  122 ccatccaaa 130  Q
    |||||||||    
T  17938123 ccatccaaa 17938115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 29798422 - 29798478
Alignment:
Q  31 ttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    |||| ||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  29798422 ttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 29798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 46007818 - 46007744
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaata--tttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||||||||||||||||||||||    ||||||  | || ||||||||||||||||||||||||    
T  46007818 atttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaagtaaac 46007744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 36278376 - 36278450
Alignment:
Q  19 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||| |||||| ||||| ||| ||||||||||||| |||| || |||||||||||| ||||| |||||    
T  36278376 ttatttatcatattaatacgttaaatttataaaaaatatttcgtagtgtctgtaatttaaaaacgaaaactaaac 36278450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 1968532 - 1968601
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||||||||| |||||  | || ||||||||||||||||||  || |||||||||||||    
T  1968532 tccgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacacc 1968601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 22659317 - 22659413
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaattt-aaaaatgaaaagtaaacattcccatcccttcccctcctaaa 117  Q
    ||||| |||||||||| |||| |||| ||||||||||| || || || ||||||| |||||||||||||||||| || | ||||||  |||||||||    
T  22659317 tttattatgttaatatattaatttttaaaaaaatattttatggtgtctgtaatttaaaaaatgaaaagtaaacactctcctcccttttcctcctaaa 22659413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 21694981 - 21694910
Alignment:
Q  47 ttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 118  Q
    |||||||  |||| ||||| ||||||||||||||| ||||||||| |  |||| ||||||||||||||||||    
T  21694981 ttaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaagccctcccgtcccttcccctcctaaac 21694910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 27735816 - 27735749
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 134  Q
    ||||||||||||||||||||| |||||  || | ||||||||||||||||||  || |||||||||||    
T  27735816 tccgtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 46007879 - 46007942
Alignment:
Q  72 aatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    |||||||||| |||||||||||  |||| ||||||||||||||||||  || ||||||||||||    
T  46007879 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 2247972 - 2248050
Alignment:
Q  65 tatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaac 143  Q
    |||| |||||||||||| |||||||||||  |||| || |||| ||||||||||  || ||||||||||||||| ||||    
T  2247972 tatctgtaatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaacacaccattaaac 2248050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 6891488 - 6891590
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||| |||||| ||| |||| ||||| ||||| | |||||||| ||| ||||||||||| |||||  ||||  |||| || |||||||||||||||| |    
T  6891488 tttataatgttattattttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaatcaaactctcccctctcttcccctcctaaactat 6891587  T
Q  122 cca 124  Q
    |||    
T  6891588 cca 6891590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 36151704 - 36151773
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||||||||||||||||||| |||||||||  ||||  |||| | | ||||||||||||||||||||||    
T  36151704 tttatcatgttaatatgttaac-ttttaaaaatcattttctagtgttcataatttaaaaatgaaaagtaaa 36151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 26167065 - 26167118
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatt 75  Q
    ||||||||||||||||||||||| || |||||| |||||| ||| |||||||||    
T  26167065 tttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgtccgtaatt 26167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 45132668 - 45132737
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||||||||  || | || |||||||||||||||| || || ||||||||||    
T  45132668 tccgtaatttaaaaaagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaacacacc 45132737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 45911368 - 45911327
Alignment:
Q  50 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 91  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  45911368 aaaaatattttatagtatccgtaatttaaaaaagaaaagtaa 45911327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 54576398 - 54576329
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||| |||||| ||||||||| |  |||| ||||||||||| ||||||  ||||||||||||||||    
T  54576398 tccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 54935137 - 54935069
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaacattccca-tcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||| |||||||||||  ||||  ||||||||||||||||||  || |||||||||||||    
T  54935137 cgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacacc 54935069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 44784128 - 44784190
Alignment:
Q  30 gttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||| ||| | |||||||||| |||| | ||||||||||||| |||||||||||    
T  44784128 gttaatatgttaacgttt-agaaaatatttcgtagtgttcgtaatttaaaaacgaaaagtaaac 44784190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 47433885 - 47433951
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||| |||||||||||  |||  ||||||||||||||||||  || | |||||||||||    
T  47433885 gtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaaccgtcaacccaaacacacc 47433951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 47846233 - 47846303
Alignment:
Q  71 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    |||||||||||  ||||||||||  |||||||||||| |||| |||||  || ||||||||||||| ||||    
T  47846233 taatttaaaaaataaaagtaaaccctcccatcccttctcctcttaaaccctcaatccaaacacaccttaaa 47846303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 55510326 - 55510407
Alignment:
Q  51 aaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 133  Q
    ||||||||| ||||| | |||||||||||||| ||||||||||  || |||  ||| ||||| |||||| |||||||||||||    
T  55510326 aaaatattttatagtgttcgtaatttaaaaat-aaaagtaaaccctcacatttctttccctcttaaactctccatccaaacac 55510407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 2247919 - 2247854
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    |||||||| |||||| |||||  |||||| ||| |||| ||| | |||||||||||||||||||||    
T  2247919 tttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaa 2247854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 45132617 - 45132517
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaa-----atgaaaagtaaacattcccatcccttcccctcctaa 116  Q
    |||||||| ||||||||||||||||||| |||| ||||| |||| | | ||||||||||     |||||||||||||  |||| || ||||| |||||||    
T  45132617 tttatcattttaatatgttaacttttta-aaaacatttcgtagtgtacataatttaaaaagattatgaaaagtaaaccatcccctctcttccgctcctaa 45132519  T
Q  117 ac 118  Q
    ||    
T  45132518 ac 45132517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 37761555 - 37761467
Alignment:
Q  48 taaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||| ||  | | |||||||||||||| |||||| |||  | || ||| ||| ||||||||||| || |||||||||||||    
T  37761555 taaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctaccctcctttctcctcctaaactctcaatccaaacacacc 37761467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 23748223 - 23748337
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||||||| | |||||||||| |||||| |||||||||||||||| |||  |||| ||||||||||||||||||  |    
T  23748223 tttatcatgttaatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccct 23748322  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  23748323 ccatccaaacacacc 23748337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 36347657 - 36347543
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||  || | ||||||||||||||||||  |    
T  36347657 tttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtgaactctctcttcccttcccctcctaaaccct 36347558  T
Q  122 ccatccaaacacacc 136  Q
     ||||||||||||||    
T  36347557 tcatccaaacacacc 36347543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 36046321 - 36046206
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    ||||| |||||||||||||||||||||||||||| ||||  |||| ||||||||||||||||||||| |||||  |||| ||  ||||||||||||||      
T  36046321 atttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccc 36046222  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  36046221 tccatccaaacacacc 36046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 8426981 - 8426879
Alignment:
Q  36 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||||||  |||| ||||||||||||||||||| ||||| |||| ||||    
T  8426981 atgttaactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaactctccattcaaatacac 8426882  T
Q  136 cat 138  Q
    |||    
T  8426881 cat 8426879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 15224811 - 15224733
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 99  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  15224811 atttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacactccc 15224733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 34209592 - 34209706
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |  | || |||| |||| | ||||||  |    
T  34209592 tttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaagtaatctcttccctcccctcccattctaaaccct 34209691  T
Q  122 ccatccaaacacacc 136  Q
     ||||||||||||||    
T  34209692 tcatccaaacacacc 34209706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 9631688 - 9631802
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||||||  | ||||||| || ||||||||||||||| ||||||| |||  ||   |||||| |||||||||||  |    
T  9631688 tttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccct 9631787  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  9631788 ccatccaaacacacc 9631802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 36566968 - 36566874
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaata-tttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcct 114  Q
    ||||||||||||||||||||||||||||| |||| | ||||||| | ||||||||||||||||||||||||||   || ||||||||||||||||    
T  36566968 atttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaaagtaaatcctctcatcccttcccctcct 36566874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 16565905 - 16565978
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacat 95  Q
    |||||||| || |||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  16565905 tttatcatatttatatgttaactttttaaaaaacgtttcatagtatccgtaatttaaaaataaaaagtaaacat 16565978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 27926681 - 27926752
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||||  || |||| ||||||||||||||||||||||||||| |||||    
T  27926681 tttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaaataaac 27926752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 39732845 - 39732774
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||| |||| |||||||| | | |||||||||||||||||||||||||    
T  39732845 tttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 39732774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 39821796 - 39821868
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||| ||||| |||||    
T  39821796 atttatcatgttaatatgttaactctttaaatattatttcatagtgtccgtaatttaaaaaagaaaactaaac 39821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 42316880 - 42316809
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |  | ||||||||||||||||||||||    
T  42316880 tttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaac 42316809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 40022510 - 40022615
Alignment:
Q  32 taatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaa 130  Q
    ||||||||| |||||||||||||  |||||||||| || ||||||||||||||||| ||||||  |||| ||||||| |||| |||||  |||||||||     
T  40022510 taatatgtttactttttaaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaag 40022609  T
Q  131 cacacc 136  Q
    ||||||    
T  40022610 cacacc 40022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 1583222 - 1583272
Alignment:
Q  39 ttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagt 89  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  1583222 ttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 1583272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 17379940 - 17379994
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaattt 76  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  17379940 tttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 7681386 - 7681443
Alignment:
Q  36 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  7681386 atgttaacttttaaaaaaatatttcataatatccgcaatttaaaaataaaaagtaaac 7681443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 12541894 - 12541999
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||| |||||||    ||||||||||||  | ||| |||||||  |||||||||  |    
T  12541894 tttatcatgttaatgtgttaactttttaaaaaacattttatagtatctgtaattt----atgaaaagtaaatctaccc-tcccttcttctcctaaaccct 12541988  T
Q  122 ccatccaaaca 132  Q
    |||||||||||    
T  12541989 ccatccaaaca 12541999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 36347714 - 36347783
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||||||  || |||||||||||||    
T  36347714 tccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacacc 36347783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 35736337 - 35736429
Alignment:
Q  44 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||  ||||||||| |||| |||||||||| ||||||| | |  |||| ||||||| ||||||||||  ||||||||||||||||    
T  35736337 tttttaaaaaacttttcatagtgtccgaaatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacacc 35736429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 887261 - 887351
Alignment:
Q  45 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||| ||||| |||| |||| |||||||||||||||| ||||||||| |  |||| |||||||||||||||||| || |||||| |||||||    
T  887261 tttttaaaaacattttatagcatccgtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaacctt-catccagacacacc 887351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 19566937 - 19566822
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||| |||||||| |||||||||||||||  |||||||||| || ||||||||||| ||| ||||||||  |||  || ||| |||| ||||||      
T  19566937 tttatcattttaatatgctaactttttaaaaaaacatttcatagtgtctgtaatttaaaactgagaagtaaaccctccattctctttcccttctaaacac 19566838  T
Q  121 tccatccaaacacacc 136  Q
    ||| ||||||||||||    
T  19566837 tccgtccaaacacacc 19566822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 28262559 - 28262500
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaa 81  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| | | |||||||||||    
T  28262559 tttatcatgttattatattaactttttaaaaaatatttcatagtgttcataatttaaaaa 28262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 45257456 - 45257555
Alignment:
Q  44 tttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 142  Q
    |||| ||||||| |||| ||| ||||||||||||||||| |||||||||||  || | ||||||||| |||||||   |||||||||||||||| |||||    
T  45257456 ttttcaaaaaatcattttataatatccgtaatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccctaaaa 45257555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 31795885 - 31795772
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||  ||| |||  |||| ||||||  ||||||||| ||||||||||||||| |||||||||    |||| ||||||| |||| |||||  |    
T  31795885 tttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccct 31795786  T
Q  122 ccatccaaacacac 135  Q
    ||||||||||||||    
T  31795785 ccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 9427053 - 9426985
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccat 138  Q
    |||||||||||| |||||  ||||  || | |||||||||||||||||||||| |||||||||||||||    
T  9427053 gtaatttaaaaaagaaaatcaaaccctctcctcccttcccctcctaaactttcaatccaaacacaccat 9426985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 15224868 - 15224936
Alignment:
Q  68 ccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||||| |||||||||||  |||| ||||||||||||||||||  |  |||||||||||||    
T  15224868 ccgtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacacc 15224936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 136
Target Start/End: Original strand, 17380007 - 17380083
Alignment:
Q  60 catagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||| |||||||||||||||||||||  ||||  |||| || |||||||||||||||  || |||||||||||||    
T  17380007 catagtgtccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacacc 17380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 29525847 - 29525768
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatat--ttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 99  Q
    |||||||||||||||||||||||||  |||||| |   ||||||||||| ||||||||||| |||||||| |||| ||||    
T  29525847 tttatcatgttaatatgttaactttccaaaaaaaaaaattcatagtatcagtaatttaaaattgaaaagtgaacactccc 29525768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 34187644 - 34187577
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||||| |||||| ||| ||||| | |||||| |||||||||| || |||||||||||||    
T  34187644 cgtaatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacacc 34187577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 39732901 - 39732978
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaaca 144  Q
    ||||||||||||||| ||||||||||   |||| | ||||||||||  |||| ||| ||||||||||||| |||||||    
T  39732901 tccgtaatttaaaaacgaaaagtaaatcatccctttccttcccctctcaaaccttcaatccaaacacaccctaaaaca 39732978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 8427051 - 8427110
Alignment:
Q  74 tttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacac 133  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||  || ||||||||||    
T  8427051 tttaaaaatgaaaagtaaactctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 22356177 - 22356252
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 142  Q
    ||||||||||||||| ||||| | |||  |||| |||||||||||||||||   || ||||||||||||| |||||    
T  22356177 tccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccctaaaa 22356252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 31061428 - 31061361
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||||  |||||| | |  |||||||| |||||||||||||| ||| |||||||||||||    
T  31061428 cgtaatttaaaaaataaaagtgagccctcccatcctttcccctcctaaaccttcaatccaaacacacc 31061361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 9427113 - 9427179
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaa 87  Q
    ||||||||| ||||||| |||||||  ||||||  |||| ||||| |||||||||||||||||||||    
T  9427113 tttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaa 9427179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 35736246 - 35736172
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    ||||| ||||||||| ||||| ||| |  |||| ||||||||||||||||||  || ||||||||||||| ||||    
T  35736246 tccgtgatttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaa 35736172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 16713587 - 16713494
Alignment:
Q  43 ctttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||| ||||||||||| ||| | | |||||||||||||| |||| | |||  |||| |||||||||||| |||||  || ||| |||||||||    
T  16713587 cttttaaaaaaatattttatattgtacgtaatttaaaaattaaaattgaactatcccttcccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 36046375 - 36046443
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||||||  |||||||||| | ||| |||||||||||| |||||  || |||||||||||||    
T  36046375 tccgtaatttaaaaaacaaaagtaaacctcccc-tcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 41841750 - 41841678
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 142  Q
    |||||||||||| |||||  ||||  ||||||||||| ||||||||||   || ||||||||||||| |||||    
T  41841750 gtaatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaatcctcaatccaaacacaccttaaaa 41841678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 34634277 - 34634385
Alignment:
Q  28 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcc 127  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| | |||  || ||||||||||||||||||||| |||||||    
T  34634277 atgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatcc 34634376  T
Q  128 aaacacacc 136  Q
    |||||||||    
T  34634377 aaacacacc 34634385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 31543188 - 31543078
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||  |||| |||||||||||| |||||  |    
T  31543188 tttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccct 31543089  T
Q  122 ccatccaaaca 132  Q
    |||||||||||    
T  31543088 ccatccaaaca 31543078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 11785654 - 11785768
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||  ||||  |||| || ||| |||||||||||  |    
T  11785654 tttatcatgttaatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctcccttctcttaccctcctaaaccct 11785753  T
Q  122 ccatccaaacacacc 136  Q
    |||||||||||||||    
T  11785754 ccatccaaacacacc 11785768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 11575522 - 11575415
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||  |||| |||||||| ||||||||   |    
T  11575522 tttatcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaaccctccc-tcccttcctctcctaaatcct 11575424  T
Q  122 ccatccaaa 130  Q
    |||||||||    
T  11575423 ccatccaaa 11575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 31738550 - 31738665
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    |||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||  |||||  |||| |  |||||||||||||||      
T  31738550 atttatcatgttaatatgttaactcttcaaaaaatattttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccc 31738649  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  31738650 tccatccaaacacacc 31738665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 1281271 - 1281341
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  1281271 tttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaa 1281341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 36308971 - 36309081
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||| |||||| |||| |||||||| | | | ||||||||||| |||||||||||||  |||| ||||||||||||||||||  |    
T  36308971 tttatcatgttaatatgtttacttttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccct 36309070  T
Q  122 ccatccaaaca 132  Q
    |||||||||||    
T  36309071 ccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 29691038 - 29690925
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||| |||  ||| |||||||||||||||  || | || |||  |||||||||||||    
T  29691038 tttatcatgttaatatgttaacttttttaaaaatatttcctagtatcagtatgttataaatgaaaagtaaactctctcgtctcttttcctcctaaacttt 29690939  T
Q  122 ccatccaaacacac 135  Q
     |||||||||||||    
T  29690938 tcatccaaacacac 29690925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 1026965 - 1026894
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||    
T  1026965 tttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaac 1026894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 3726965 - 3726859
Alignment:
Q  36 atgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||||||| ||||||||| ||| ||| || ||||||||||||||||||||| |||||  |||  ||||||||||||||||||  |||||||||||||||    
T  3726965 atgttaactatttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacac 3726866  T
Q  136 cataaaa 142  Q
    | |||||    
T  3726865 cctaaaa 3726859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 16653084 - 16653190
Alignment:
Q  29 tgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatcca 128  Q
    |||||||||||||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||  || | |||||||||||| |||||  | ||||||    
T  16653084 tgttaatatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaaccattcatcca 16653183  T
Q  129 aacacac 135  Q
    |||||||    
T  16653184 aacacac 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 30479834 - 30479721
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    ||||||||  |||||||||||||||||||||| | |||||||||| || |||||||||||||||||||| |||  |||| ||| | |||||||||||       
T  30479834 atttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaagtgaactctcccctccatccccctcctaaatcc 30479735  T
Q  121 tccatccaaacaca 134  Q
    ||||||||||||||    
T  30479734 tccatccaaacaca 30479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 9718595 - 9718530
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    ||||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||    
T  9718595 tttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaa 9718530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 30664489 - 30664566
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 99  Q
    |||||||| |||||||||||||||||||||||||||||  || | |||||||||||||| |||||| |||||||||||    
T  30664489 tttatcatattaatatgttaactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaataaacattccc 30664566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 2248586 - 2248666
Alignment:
Q  28 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcc 108  Q
    ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| |||||| |||  |||| ||||||||    
T  2248586 atgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagtgaaccctcccctcccttcc 2248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 37923195 - 37923123
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||| | | |||||||||||||||||||||||    
T  37923195 atttatcatgttaatattttaactctttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaac 37923123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 29358455 - 29358385
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  29358455 tttataatgttaatatgttaa-tttttaaaaaatattttatagtgtccgtaatttaaaaataaaaagtaaac 29358385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 11033545 - 11033659
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaat-atttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    ||||||||||||||||||||| |||||||||||  |||||||| ||| | |||||||||| |||||||||||  ||| | ||||||| ||||||||||      
T  11033545 tttatcatgttaatatgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaagtaaatcttctcctcccttctcctcctaaaccc 11033644  T
Q  121 tccatccaaacacac 135  Q
    |||||| ||| ||||    
T  11033645 tccatctaaagacac 11033659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 43732860 - 43732929
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||||||||  ||||||||||||||||    
T  43732860 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 43732929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 10028259 - 10028347
Alignment:
Q  31 ttaatatgttaactttttaaaa-aatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaac 118  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||||||| | ||||||||||  |||| || ||||| |||||||||    
T  10028259 ttaatatgttaacttttaaaaaaaatatttcatagtgtccgtaatttaaaagtaaaaagtaaaccctcccctcacttcctctcctaaac 10028347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 7503070 - 7502999
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||||||||||| |||| |||||||||| |  |||||||||||||| |||| ||||    
T  7503070 tttatcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaatggaaagcaaac 7502999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 7979265 - 7979340
Alignment:
Q  19 ttatttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaaca 94  Q
    |||||||||||||||||| |||||  |||||| ||| ||||||  || ||||||||||||||||||||||||||||    
T  7979265 ttatttatcatgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaagtaaaca 7979340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 6315190 - 6315255
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 87  Q
    ||||||| ||||||||||||| ||||| ||||| |||||||||| |||||| ||||||||||||||    
T  6315190 tttatcaagttaatatgttaatttttttaaaaacatttcatagtgtccgtattttaaaaatgaaaa 6315255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 28083870 - 28083934
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 86  Q
    ||||||||||| | ||||||||| ||||||||| || ||||||||||||||||||||||| ||||    
T  28083870 tttatcatgttgacatgttaactctttaaaaaacatatcatagtatccgtaatttaaaaaagaaa 28083934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 4247633 - 4247563
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||| |||||||||||||| ||||||||||||| | |||  ||||||||||||||| ||||||||||    
T  4247633 tttatcatgctaatatgttaacttcttaaaaaatattttaaagt-gccgtaatttaaaaataaaaagtaaac 4247563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 9718656 - 9718730
Alignment:
Q  71 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaacaa 145  Q
    ||||||||||| ||||||||||| ||||| ||||||| ||||||||||  || ||||||||||||| | ||||||    
T  9718656 taatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccctgaaacaa 9718730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 1281214 - 1281149
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaaca 132  Q
    ||||||||||||||| |||||||||||  || ||||||||||||||||||||  || |||||||||    
T  1281214 tccgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 16024327 - 16024394
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||||||||   |||||||||||||||    
T  16024327 tccgtaatttaaaaa-gaaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 31543249 - 31543319
Alignment:
Q  71 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    ||||||||||| |||||||||||  |||| ||||||||||||||||||  || ||| ||||||||| ||||    
T  31543249 taatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccctaaa 31543319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 35694862 - 35694828
Alignment:
Q  31 ttaatatgttaactttttaaaaaatatttcatagt 65  Q
    |||||||||||||||||||||||||||||||||||    
T  35694862 ttaatatgttaactttttaaaaaatatttcatagt 35694828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 37032507 - 37032561
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaattt 76  Q
    |||||||| |||||||||||||||||||||||| | ||| |||| ||||||||||    
T  37032507 tttatcatcttaatatgttaactttttaaaaaacacttcctagtgtccgtaattt 37032561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 13405104 - 13405178
Alignment:
Q  22 tttatcatgttaatatgttaa----ctttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaa 92  Q
    ||||||||||||||| |||||    ||||| |||||||||||  || | ||||||||||||||||||||||||||    
T  13405104 tttatcatgttaatacgttaattcacttttaaaaaaatattttttaatgtccgtaatttaaaaatgaaaagtaaa 13405178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 41103622 - 41103506
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaattt--aaaaatgaaaagtaaacattcccatcccttcccctcctaaact 119  Q
    |||||||||||| | | |||| ||||| |||||  ||||||||| ||| ||||||  ||||| |||||  ||||  |||| || |||||||||||||||     
T  41103622 tttatcatgttattgttttaatttttttaaaaacgtttcatagtgtccataatttttaaaaacgaaaatcaaaccctcccctctcttcccctcctaaacc 41103523  T
Q  120 ttccatccaaacacacc 136  Q
     ||||||||||||||||    
T  41103522 ctccatccaaacacacc 41103506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 2248522 - 2248454
Alignment:
Q  68 ccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||||| | ||| | |||  |||| ||||||||||||||||||| || |||||||||||||    
T  2248522 ccgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacacc 2248454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 8815316 - 8815383
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||||| |||||| |||  |||| ||||| ||||||||||||  || |||||||||||||    
T  8815316 cgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacacc 8815383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 24243164 - 24243052
Alignment:
Q  21 atttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactt 120  Q
    ||||||||||||| ||| | || ||||||||| | |||| ||||| || ||||||| ||||||||||||||    |||| ||||||||| || ||||||     
T  24243164 atttatcatgttattatttcaa-tttttaaaagacattttatagtgtc-gtaatttcaaaatgaaaagtaagtcatcccttcccttccc-tcttaaactc 24243068  T
Q  121 tccatccaaacacacc 136  Q
    ||||||||||||||||    
T  24243067 tccatccaaacacacc 24243052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 5562058 - 5562012
Alignment:
Q  45 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 91  Q
    |||||||||||| || ||| ||| |||||||||||||||||||||||    
T  5562058 ttttaaaaaataatttatattatacgtaatttaaaaatgaaaagtaa 5562012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 7394636 - 7394701
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 134  Q
    |||||||||||||  |||||| |||  |||| ||||||||||||||||||  || |||||||||||    
T  7394636 cgtaatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 30365219 - 30365126
Alignment:
Q  49 aaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 142  Q
    ||||||||||| ||  | | |||||||||||||| |||||| |||  |||| ||| ||| ||||||||||  || ||||||||||||| |||||    
T  30365219 aaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatccaaacacaccctaaaa 30365126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 40990299 - 40990183
Alignment:
Q  23 ttatcatgttaatatgttaacttttt--aaaaaatatttcatagtatccgt-aatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaact 119  Q
    |||||||||||||||||||||| |||  |||||| |||||||||| ||  | |||| ||||||||||  |||||  |||| ||| |||  |||| ||||     
T  40990299 ttatcatgttaatatgttaactctttaaaaaaaacatttcatagtgtctataaattaaaaaatgaaatataaaccctcccctcctttcttctcccaaacc 40990200  T
Q  120 ttccatccaaacacacc 136  Q
     ||||||||||||||||    
T  40990199 ctccatccaaacacacc 40990183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 42919879 - 42919912
Alignment:
Q  45 ttttaaaaaatatttcatagtatccgtaatttaa 78  Q
    ||||||||||||||| ||||||||||||||||||    
T  42919879 ttttaaaaaatattttatagtatccgtaatttaa 42919912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 7503126 - 7503202
Alignment:
Q  66 atccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaaa 142  Q
    |||| ||||||||||| |||||||||||  |||| |||| |||||||| |||   || ||||||||||||| |||||    
T  7503126 atccataatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccctaaaa 7503202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 11575582 - 11575646
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 134  Q
    ||||||||||||||||||||||||  |||| ||||||| | ||||||||  |  |||||||||||    
T  11575582 gtaatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 33922648 - 33922680
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaa 54  Q
    ||||||||| |||||||||||||||||||||||    
T  33922648 tttatcatgataatatgttaactttttaaaaaa 33922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 16412 - 16302
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    |||||||||||||||||||||| ||||| |||| |||||||||| | | |||||||||||||||||||||||  |||| ||| || |||||||||||  |    
T  16412 tttatcatgttaatatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccct 16313  T
Q  122 ccatccaaaca 132  Q
    |||||||||||    
T  16312 ccatccaaaca 16302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 16082 - 16173
Alignment:
Q  26 tcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaa 117  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||  |  | |||||||||||||||||    
T  16082 tcatattaatatgttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaataaactctttcctcccttcccctcctaaa 16173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 3235 - 3150
Alignment:
Q  50 aaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||| |||||||||| || |||||||||||| |||||||||||  |||| ||||||||||||||||||| || ||||||||||||    
T  3235 aaaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 1300 - 1377
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattccc 99  Q
    |||||||||  |||||||||||||||||||||| |||||||||| | | ||||||||||||||||||||||| |||||    
T  1300 tttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccttccc 1377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 1243 - 1175
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacac 135  Q
    ||||||||||||||| |||||||||||  |||| || |||||||||||||||  || ||||||||||||    
T  1243 tccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 15391 - 15507
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaacttt 121  Q
    ||||||| ||||||||||| || |||||||||| ||| |||||| |||||||||||||||| ||||||| |   ||   ||||||||| ||||||||  |    
T  15391 tttatcacgttaatatgttgaccttttaaaaaacatt-catagtgtccgtaatttaaaaataaaaagtagatcctcatttcccttcccttcctaaaccct 15489  T
Q  122 ccatccaaacacaccata 139  Q
    ||||||||||||||||||    
T  15490 ccatccaaacacaccata 15507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 18897 - 18968
Alignment:
Q  22 tttatcatgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||| ||||||| |||||||||| |||||||| |||   |||||||||||||||||||||    
T  18897 tttatcatgttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 18968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 6717 - 6780
Alignment:
Q  28 atgttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaa 91  Q
    |||||||||| |||| ||||| |||||||||||||||| | ||||||||||||| |||||||||    
T  6717 atgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagtaa 6780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 6652 - 6581
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacaccataaa 141  Q
    |||||||||||| |||||||||||  |||| ||||||| |||||||||  ||| ||||||||||||| ||||    
T  6652 gtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccctaaa 6581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 242366 - 242456
Alignment:
Q  44 tttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 134  Q
    ||||||||||  |||| ||| | ||||||||||||||| |||||||||||  |||| |||||||||||  |||||  ||||||||||||||    
T  242366 tttttaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 17716 - 17780
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacacacc 136  Q
    |||||||||||| |||||||||||   ||| |||||||| |||||||||  ||||||||||||||||    
T  17716 gtaatttaaaaaagaaaagtaaacc--cccctcccttccactcctaaaccctccatccaaacacacc 17780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 184784 - 184847
Alignment:
Q  71 taatttaaaaatgaaaagtaaacattcccatcccttcccctcctaaactttccatccaaacaca 134  Q
    ||||||||||| ||| |||||||  |||| |||||| |||||||||||  ||||||||||||||    
T  184784 taatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University