View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10346_low_44 (Length: 254)

Name: NF10346_low_44
Description: NF10346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10346_low_44
NF10346_low_44
[»] chr3 (73 HSPs)
chr3 (15-197)||(40838646-40838825)
chr3 (12-191)||(40275464-40275639)
chr3 (12-197)||(330206-330388)
chr3 (12-193)||(52375701-52375879)
chr3 (12-197)||(25534884-25535067)
chr3 (12-189)||(52236818-52236992)
chr3 (12-197)||(55389599-55389781)
chr3 (12-192)||(46013421-46013598)
chr3 (12-192)||(51828538-51828716)
chr3 (12-193)||(49720369-49720547)
chr3 (12-192)||(51827956-51828133)
chr3 (12-195)||(47431692-47431873)
chr3 (12-193)||(55389967-55390145)
chr3 (12-188)||(40839022-40839195)
chr3 (12-188)||(51473225-51473399)
chr3 (12-191)||(40275093-40275271)
chr3 (12-195)||(41998225-41998406)
chr3 (15-191)||(43678657-43678830)
chr3 (12-191)||(49951916-49952092)
chr3 (12-191)||(51828910-51829086)
chr3 (14-189)||(52237189-52237361)
chr3 (27-188)||(22370599-22370758)
chr3 (12-185)||(34105018-34105190)
chr3 (11-193)||(2051293-2051476)
chr3 (12-191)||(43678295-43678471)
chr3 (14-192)||(2044270-2044445)
chr3 (14-192)||(51472854-51473029)
chr3 (12-192)||(14654561-14654736)
chr3 (12-193)||(32730387-32730565)
chr3 (14-193)||(38535667-38535843)
chr3 (12-190)||(46013792-46013968)
chr3 (20-193)||(38535307-38535477)
chr3 (12-200)||(32730759-32730944)
chr3 (12-188)||(49951549-49951722)
chr3 (12-191)||(50662782-50662958)
chr3 (12-191)||(52375327-52375503)
chr3 (12-192)||(41998600-41998775)
chr3 (27-191)||(44676472-44676633)
chr3 (12-188)||(44676842-44677015)
chr3 (12-191)||(51828327-51828504)
chr3 (50-192)||(49720769-49720908)
chr3 (12-189)||(30513724-30513898)
chr3 (18-190)||(43222765-43222935)
chr3 (21-192)||(16701168-16701339)
chr3 (50-197)||(16689352-16689496)
chr3 (12-165)||(34104664-34104813)
chr3 (101-192)||(36701105-36701196)
chr3 (28-190)||(37075687-37075848)
chr3 (100-193)||(33412609-33412702)
chr3 (98-193)||(14654197-14654292)
chr3 (12-192)||(39010074-39010250)
chr3 (12-135)||(43222446-43222566)
chr3 (98-193)||(49407794-49407889)
chr3 (98-193)||(50900980-50901075)
chr3 (98-196)||(27199697-27199795)
chr3 (98-187)||(329850-329939)
chr3 (101-190)||(37076131-37076219)
chr3 (101-189)||(36701552-36701640)
chr3 (28-191)||(55192118-55192277)
chr3 (98-188)||(8874139-8874229)
chr3 (101-191)||(12141147-12141237)
chr3 (28-193)||(27200078-27200239)
chr3 (160-193)||(29801930-29801963)
chr3 (101-197)||(12140931-12141026)
chr3 (101-189)||(50900534-50900621)
chr3 (18-69)||(14654310-14654361)
chr3 (140-191)||(50116903-50116954)
chr3 (160-194)||(37220554-37220588)
chr3 (111-188)||(8873694-8873770)
chr3 (160-197)||(23644456-23644493)
chr3 (160-192)||(25611497-25611529)
chr3 (121-193)||(30104480-30104551)
chr3 (160-200)||(37222085-37222125)
[»] chr2 (60 HSPs)
chr2 (12-192)||(42192612-42192790)
chr2 (12-197)||(11540008-11540190)
chr2 (12-193)||(20128107-20128285)
chr2 (12-191)||(42192240-42192416)
chr2 (12-193)||(38007948-38008127)
chr2 (12-192)||(44220013-44220192)
chr2 (14-191)||(4355755-4355929)
chr2 (12-197)||(38008321-38008503)
chr2 (12-192)||(11539636-11539814)
chr2 (12-197)||(63328-63516)
chr2 (12-203)||(16175719-16175908)
chr2 (20-210)||(15550654-15550842)
chr2 (12-193)||(62955-63133)
chr2 (12-192)||(649526-649702)
chr2 (15-203)||(20127724-20127910)
chr2 (12-192)||(32418158-32418333)
chr2 (15-192)||(6949450-6949625)
chr2 (12-193)||(33920981-33921160)
chr2 (14-193)||(43160007-43160184)
chr2 (12-192)||(43216079-43216256)
chr2 (27-193)||(24140064-24140222)
chr2 (12-190)||(16953304-16953479)
chr2 (12-194)||(44219641-44219820)
chr2 (12-197)||(4809249-4809431)
chr2 (12-188)||(33920615-33920788)
chr2 (14-197)||(43160382-43160563)
chr2 (12-200)||(13315484-13315673)
chr2 (12-193)||(4356126-4356304)
chr2 (12-165)||(4808905-4809055)
chr2 (12-192)||(16952934-16953113)
chr2 (12-192)||(17060905-17061084)
chr2 (27-151)||(13399462-13399583)
chr2 (12-88)||(5560920-5560996)
chr2 (12-188)||(9330164-9330338)
chr2 (99-193)||(25336054-25336148)
chr2 (99-191)||(6949898-6949990)
chr2 (101-193)||(28143485-28143577)
chr2 (12-165)||(13399790-13399939)
chr2 (12-193)||(15551044-15551223)
chr2 (98-197)||(31797230-31797329)
chr2 (101-193)||(20495191-20495283)
chr2 (14-88)||(43215809-43215883)
chr2 (99-192)||(5560050-5560143)
chr2 (46-193)||(32418550-32418694)
chr2 (110-194)||(649802-649886)
chr2 (12-87)||(22445741-22445816)
chr2 (101-154)||(5035900-5035953)
chr2 (12-84)||(9329985-9330056)
chr2 (105-193)||(14942306-14942394)
chr2 (102-149)||(5037155-5037202)
chr2 (138-201)||(35779698-35779761)
chr2 (140-189)||(15551501-15551550)
chr2 (121-202)||(28847171-28847251)
chr2 (160-193)||(43058846-43058879)
chr2 (105-181)||(2190536-2190612)
chr2 (124-188)||(5561019-5561083)
chr2 (160-192)||(7446341-7446373)
chr2 (116-192)||(9747520-9747596)
chr2 (160-196)||(11091034-11091070)
chr2 (110-193)||(18451295-18451378)
[»] chr5 (42 HSPs)
chr5 (12-200)||(18150093-18150279)
chr5 (12-193)||(21371066-21371244)
chr5 (12-193)||(15115465-15115640)
chr5 (14-192)||(28289683-28289858)
chr5 (12-195)||(15029679-15029859)
chr5 (12-194)||(28290014-28290193)
chr5 (12-193)||(4967139-4967319)
chr5 (12-191)||(19291356-19291533)
chr5 (12-190)||(32697593-32697771)
chr5 (12-188)||(4966819-4966991)
chr5 (12-187)||(38900648-38900818)
chr5 (12-190)||(8418991-8419165)
chr5 (20-191)||(38901020-38901186)
chr5 (12-189)||(22651347-22651521)
chr5 (98-194)||(18149730-18149826)
chr5 (12-189)||(39083361-39083536)
chr5 (101-193)||(20266371-20266463)
chr5 (27-188)||(14340792-14340953)
chr5 (101-194)||(17260676-17260769)
chr5 (101-178)||(32305831-32305908)
chr5 (12-88)||(5161683-5161759)
chr5 (101-193)||(22651767-22651859)
chr5 (101-189)||(28595182-28595270)
chr5 (101-192)||(41834516-41834606)
chr5 (98-192)||(5162022-5162116)
chr5 (111-188)||(14340401-14340478)
chr5 (28-193)||(16752580-16752741)
chr5 (111-191)||(13556995-13557072)
chr5 (108-194)||(28495294-28495380)
chr5 (101-198)||(10721779-10721875)
chr5 (14-84)||(21370798-21370870)
chr5 (105-193)||(20260923-20261011)
chr5 (98-190)||(27307513-27307605)
chr5 (138-193)||(24331557-24331612)
chr5 (14-88)||(14340480-14340554)
chr5 (160-197)||(2865269-2865306)
chr5 (130-191)||(4623148-4623209)
chr5 (160-189)||(15371873-15371902)
chr5 (12-57)||(22651715-22651760)
chr5 (160-193)||(24362350-24362383)
chr5 (28-192)||(27307060-27307220)
chr5 (12-65)||(32697458-32697511)
[»] chr7 (51 HSPs)
chr7 (12-193)||(48247585-48247767)
chr7 (12-192)||(9181779-9181959)
chr7 (12-192)||(2758068-2758245)
chr7 (12-193)||(7732486-7732664)
chr7 (12-191)||(27245203-27245380)
chr7 (50-195)||(5333876-5334018)
chr7 (14-191)||(26048319-26048492)
chr7 (12-189)||(9181534-9181708)
chr7 (14-192)||(16081671-16081846)
chr7 (12-199)||(787152-787340)
chr7 (12-193)||(25637195-25637374)
chr7 (12-193)||(48247961-48248140)
chr7 (12-188)||(25637568-25637741)
chr7 (12-188)||(26026320-26026494)
chr7 (12-191)||(24929673-24929854)
chr7 (12-185)||(35161171-35161342)
chr7 (12-196)||(39388636-39388819)
chr7 (14-192)||(786781-786957)
chr7 (12-165)||(27245574-27245724)
chr7 (12-192)||(34595142-34595319)
chr7 (12-188)||(28687869-28688041)
chr7 (12-190)||(15712366-15712541)
chr7 (11-192)||(5746008-5746187)
chr7 (12-188)||(5745642-5745815)
chr7 (12-188)||(11973772-11973945)
chr7 (12-192)||(16081298-16081475)
chr7 (99-189)||(5334273-5334363)
chr7 (12-192)||(11971333-11971514)
chr7 (12-193)||(26026688-26026866)
chr7 (103-192)||(39136991-39137080)
chr7 (14-148)||(14311659-14311790)
chr7 (12-197)||(7732857-7733039)
chr7 (12-189)||(34594585-34594758)
chr7 (101-193)||(39136684-39136776)
chr7 (12-138)||(14311368-14311492)
chr7 (12-70)||(26048066-26048124)
chr7 (31-191)||(28687593-28687750)
chr7 (98-193)||(16917711-16917806)
chr7 (101-190)||(35579342-35579430)
chr7 (101-189)||(9393738-9393825)
chr7 (99-190)||(9394184-9394274)
chr7 (101-192)||(49064033-49064124)
chr7 (101-191)||(4477702-4477792)
chr7 (27-88)||(33880970-33881030)
chr7 (13-84)||(35160906-35160976)
chr7 (100-182)||(18535338-18535419)
chr7 (101-192)||(45815343-45815431)
chr7 (160-196)||(35289415-35289451)
chr7 (98-197)||(26047951-26048050)
chr7 (160-200)||(28583430-28583470)
chr7 (105-189)||(33880622-33880706)
[»] scaffold0097 (2 HSPs)
scaffold0097 (12-197)||(46260-46443)
scaffold0097 (12-193)||(46637-46816)
[»] chr4 (62 HSPs)
chr4 (12-193)||(46737025-46737203)
chr4 (12-193)||(34807114-34807293)
chr4 (12-189)||(34789752-34789927)
chr4 (15-193)||(33689827-33690001)
chr4 (12-189)||(28465083-28465257)
chr4 (12-192)||(55677327-55677505)
chr4 (12-188)||(14439831-14440004)
chr4 (12-191)||(14440198-14440374)
chr4 (27-197)||(19528863-19529031)
chr4 (16-197)||(21034229-21034408)
chr4 (12-192)||(21034606-21034784)
chr4 (12-189)||(24851835-24852010)
chr4 (12-193)||(45838545-45838723)
chr4 (12-191)||(34789382-34789558)
chr4 (12-197)||(45838917-45839101)
chr4 (12-189)||(54440573-54440745)
chr4 (13-191)||(56077695-56077870)
chr4 (12-189)||(54440939-54441113)
chr4 (12-199)||(26974275-26974460)
chr4 (12-193)||(12593393-12593571)
chr4 (12-188)||(41608377-41608551)
chr4 (12-205)||(28465451-28465641)
chr4 (14-188)||(36168332-36168506)
chr4 (12-188)||(41114160-41114335)
chr4 (14-192)||(12593023-12593198)
chr4 (14-88)||(24851565-24851639)
chr4 (12-205)||(28165990-28166180)
chr4 (12-188)||(6616675-6616849)
chr4 (28-177)||(35193322-35193467)
chr4 (50-201)||(6617070-6617217)
chr4 (12-194)||(229158-229337)
chr4 (98-188)||(26974698-26974788)
chr4 (12-166)||(34807509-34807660)
chr4 (14-192)||(46736654-46736829)
chr4 (12-188)||(229529-229702)
chr4 (100-193)||(41608870-41608963)
chr4 (12-88)||(35643667-35643743)
chr4 (100-195)||(24851312-24851407)
chr4 (12-188)||(16214865-16215038)
chr4 (12-193)||(19529063-19529242)
chr4 (105-189)||(24336223-24336307)
chr4 (101-193)||(35193759-35193850)
chr4 (98-165)||(33778065-33778132)
chr4 (98-192)||(40160093-40160187)
chr4 (99-191)||(30597973-30598065)
chr4 (19-86)||(18965513-18965580)
chr4 (103-188)||(10795769-10795854)
chr4 (98-151)||(17504412-17504465)
chr4 (101-190)||(18965141-18965230)
chr4 (12-85)||(36168701-36168774)
chr4 (103-194)||(1397592-1397683)
chr4 (101-192)||(51309961-51310052)
chr4 (116-193)||(24335759-24335836)
chr4 (160-197)||(51021309-51021346)
chr4 (98-193)||(33777630-33777725)
chr4 (105-191)||(51309667-51309753)
chr4 (115-188)||(16690939-16691012)
chr4 (130-191)||(16691555-16691616)
chr4 (101-190)||(23986521-23986610)
chr4 (52-88)||(35643968-35644004)
chr4 (125-189)||(35644042-35644106)
chr4 (125-189)||(44219377-44219441)
[»] chr1 (59 HSPs)
chr1 (14-191)||(2868080-2868254)
chr1 (12-196)||(1837500-1837681)
chr1 (11-193)||(34555377-34555558)
chr1 (14-194)||(8230013-8230190)
chr1 (12-188)||(17641734-17641912)
chr1 (12-193)||(8229635-8229816)
chr1 (12-194)||(34555750-34555931)
chr1 (12-190)||(44954596-44954771)
chr1 (12-189)||(10278550-10278725)
chr1 (12-192)||(30786770-30786948)
chr1 (12-192)||(52335880-52336057)
chr1 (12-193)||(37421158-37421338)
chr1 (15-189)||(1744330-1744500)
chr1 (14-192)||(4080020-4080195)
chr1 (12-197)||(443921-444103)
chr1 (12-188)||(21938566-21938739)
chr1 (12-191)||(23340183-23340359)
chr1 (12-192)||(29438929-29439107)
chr1 (12-191)||(37505438-37505613)
chr1 (12-190)||(16298683-16298858)
chr1 (98-193)||(39485063-39485158)
chr1 (12-193)||(9992152-9992331)
chr1 (14-191)||(10278922-10279093)
chr1 (12-189)||(44582059-44582233)
chr1 (98-189)||(50304441-50304532)
chr1 (192-254)||(938788-938850)
chr1 (12-191)||(9992525-9992701)
chr1 (98-188)||(45048158-45048248)
chr1 (12-165)||(44954252-44954402)
chr1 (15-193)||(16299055-16299229)
chr1 (99-193)||(17088593-17088687)
chr1 (12-193)||(29021234-29021413)
chr1 (12-149)||(50305152-50305289)
chr1 (12-191)||(9833522-9833698)
chr1 (14-151)||(17641405-17641539)
chr1 (27-192)||(37505066-37505229)
chr1 (12-194)||(50926611-50926790)
chr1 (98-198)||(30787251-30787351)
chr1 (22-189)||(2867913-2868077)
chr1 (12-87)||(6224800-6224875)
chr1 (101-196)||(48174178-48174273)
chr1 (12-189)||(50926232-50926408)
chr1 (12-189)||(44582427-44582603)
chr1 (101-190)||(23526659-23526748)
chr1 (12-88)||(50304882-50304958)
chr1 (98-165)||(29439375-29439442)
chr1 (101-189)||(23526986-23527074)
chr1 (116-196)||(39485509-39485589)
chr1 (101-193)||(44802627-44802719)
chr1 (101-192)||(36228792-36228883)
chr1 (101-203)||(45048592-45048693)
chr1 (102-187)||(25274760-25274845)
chr1 (98-165)||(37421397-37421465)
chr1 (160-194)||(26859573-26859607)
chr1 (160-196)||(15173607-15173643)
chr1 (138-194)||(18984116-18984172)
chr1 (101-189)||(44291303-44291391)
chr1 (123-195)||(50970274-50970345)
chr1 (160-192)||(52268289-52268321)
[»] chr8 (35 HSPs)
chr8 (12-191)||(7910986-7911162)
chr8 (12-190)||(28254796-28254971)
chr8 (12-191)||(9796726-9796902)
chr8 (12-193)||(35427182-35427360)
chr8 (15-193)||(42036144-42036320)
chr8 (12-194)||(34799453-34799632)
chr8 (17-193)||(15256203-15256379)
chr8 (12-197)||(18428131-18428314)
chr8 (12-193)||(41260631-41260809)
chr8 (16-192)||(599531-599704)
chr8 (12-190)||(35693869-35694046)
chr8 (12-190)||(42035773-42035948)
chr8 (12-194)||(28254422-28254602)
chr8 (12-191)||(18049590-18049767)
chr8 (13-193)||(6115481-6115659)
chr8 (54-193)||(15255851-15255987)
chr8 (12-188)||(18049961-18050134)
chr8 (12-195)||(599868-600048)
chr8 (12-193)||(16578106-16578285)
chr8 (12-193)||(34799077-34799256)
chr8 (12-188)||(9797096-9797270)
chr8 (14-188)||(35694242-35694421)
chr8 (15-193)||(26252809-26252982)
chr8 (12-189)||(2208716-2208891)
chr8 (12-193)||(16578466-16578644)
chr8 (14-193)||(5730815-5730990)
chr8 (98-192)||(7910615-7910709)
chr8 (12-149)||(5731182-5731316)
chr8 (50-192)||(41260270-41260409)
chr8 (12-70)||(35163816-35163874)
chr8 (101-184)||(28876910-28876993)
chr8 (98-192)||(18674147-18674241)
chr8 (106-188)||(28877350-28877432)
chr8 (12-84)||(35426917-35426989)
chr8 (160-192)||(9930171-9930203)
[»] chr6 (26 HSPs)
chr6 (12-202)||(31574095-31574282)
chr6 (12-192)||(5114467-5114644)
chr6 (12-191)||(31073512-31073688)
chr6 (12-191)||(25472382-25472559)
chr6 (29-193)||(5120856-5121017)
chr6 (12-194)||(29891077-29891256)
chr6 (12-188)||(24640555-24640728)
chr6 (15-193)||(30251064-30251240)
chr6 (12-193)||(25468847-25469027)
chr6 (44-196)||(28636287-28636435)
chr6 (12-88)||(28636566-28636642)
chr6 (12-193)||(31573718-31573901)
chr6 (98-197)||(35163640-35163739)
chr6 (15-88)||(29891453-29891526)
chr6 (115-193)||(835695-835773)
chr6 (138-191)||(22534217-22534270)
chr6 (101-193)||(31242804-31242896)
chr6 (101-189)||(33095716-33095804)
chr6 (12-70)||(30250809-30250867)
chr6 (101-193)||(835392-835484)
chr6 (48-88)||(31073250-31073290)
chr6 (101-193)||(32836005-32836096)
chr6 (112-191)||(31073143-31073222)
chr6 (160-194)||(1149462-1149496)
chr6 (98-191)||(32836449-32836542)
chr6 (160-192)||(31470314-31470346)
[»] scaffold0712 (2 HSPs)
scaffold0712 (12-191)||(6392-6568)
scaffold0712 (12-188)||(6761-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (12-191)||(6410-6586)
scaffold0709 (12-188)||(6779-6957)
[»] scaffold1432 (1 HSPs)
scaffold1432 (98-193)||(518-613)
[»] scaffold0007 (4 HSPs)
scaffold0007 (101-192)||(210793-210884)
scaffold0007 (101-193)||(204926-205018)
scaffold0007 (101-189)||(205823-205911)
scaffold0007 (101-193)||(205356-205448)
[»] scaffold0025 (1 HSPs)
scaffold0025 (12-88)||(78417-78493)
[»] scaffold0108 (1 HSPs)
scaffold0108 (101-191)||(15554-15644)
[»] scaffold0057 (1 HSPs)
scaffold0057 (126-188)||(61939-62000)


Alignment Details
Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 40838825 - 40838646
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||         ||||||||||| |||||    
T  40838825 ataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa---catatagtttatggacg 40838729  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    |||||||||||||||||||||||| |||||||||||| ||||  ||||||| |||||||||||||||||||||| ||||||||    
T  40838728 attttgtttgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaaacctatttt 40838646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 40275464 - 40275639
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||| |    
T  40275464 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc---aaaaaacatatagtttagag 40275560  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  |||||||  ||||| ||||||||||||||||||    
T  40275561 acgattttgttcgatttaaaagaggtaggacca-tttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 40275639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 330206 - 330388
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| | ||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||         ||||||||||||||    
T  330206 agcataggtggttggattaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaa---catatagtttaggg 330302  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||  ||||||| |||||| |||| |||||||||||||| ||||    
T  330303 acgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaagcctttttt 330388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 52375701 - 52375879
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||| ||    
T  52375701 agcataagtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaa---catatagtttatgg 52375797  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||  ||||||||||||||||||||||||||| ||||  ||||||| |||||| ||||||||||||||||||||    
T  52375798 acgattttgttcaatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagccta 52375879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 25535067 - 25534884
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagttta-gg 110  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||         |||||| |||| ||    
T  25535067 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatataatttaggg 25534971  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    |||||||||||| |||||||||||||||||||||||||| | | ||  ||||||| |||||| ||||||||||||||||||| ||||    
T  25534970 gacgattttgttcgatttaaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaagcctttttt 25534884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 52236992 - 52236818
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||| ||| ||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||         ||||||||||||||    
T  52236992 agcataggtgattggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggggatatgactaaaactgc---aaaaaacatatagtttaggg 52236896  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||| ||||||||||||||| |||||||||||| | ||  ||||||| ||||||  |||||||||||||||    
T  52236895 acgattttgttcgatttaaaagaggtatgaccattttcgtgaattgttcaaaatgcgaggactaaaagtgtaattaag 52236818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 55389781 - 55389599
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  55389781 agcataggtggttgaactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaagg 55389685  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||  || ||||  ||||| |||||||||||||| |||||||||    
T  55389684 acgattttgttcgatttaaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaattatgcctatttt 55389599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 46013598 - 46013421
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||  |||||| |||||||||||||||||| |||||||| |||||||||||||||||         |||||| |||||||    
T  46013598 agcataggtggttggactaaaaccgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa---catatactttaggg 46013502  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||| ||||| |||||| ||||  ||||||| | ||||||||||||||||||||||||    
T  46013501 acgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 46013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 51828716 - 51828538
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  51828716 agcatagatggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagtttacgg 51828619  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||| ||||| |||||||| ||  ||||||| | |||| |||||||||||||||||||    
T  51828618 acgattttgttcgatttaaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaagcct 51828538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 49720547 - 49720369
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||| |||||| || |||| ||||||||||||         | |||| |||||||    
T  49720547 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaa---cgtatactttaggg 49720451  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||| | |||||||||||||||||||||||||    
T  49720450 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagccta 49720369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 51828133 - 51827956
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||| |||| |||||||| |||         ||||||||||||||    
T  51828133 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaa---catatagtttaggg 51828037  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| |||||||||||| |||||||| |||||| ||||  ||||||| | |||| |||||||||||||||||||    
T  51828036 acgattttgttcgatttaaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 51827956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 47431873 - 47431692
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||| |||| ||||||||||||         |||||||||||  |    
T  47431873 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaa--catatagtttaaag 47431776  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatt 195  Q
    ||||||||||| ||||||||||||||| |||||||||||| ||||  |||||||   |||| ||||||||||||||||||||||    
T  47431775 acgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctatt 47431692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 55389967 - 55390145
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| | || |||||||||| |         |||||||||||| |    
T  55389967 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaaa---catatagtttagtg 55390063  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||  | ||||| |||||| ||||||||||||||||||||    
T  55390064 acgattttgtttgatttaaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaagccta 55390145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 40839022 - 40839195
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| || |||| ||||||||| |||||| ||||||||||||||||| ||||||||| |||| ||||||||||||         ||||||||||||||    
T  40839022 agcatatgtagttggactaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaa---catatagtttaggg 40839118  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||||||||| |||||||||||| ||||  |||||||  ||||| |||||||||||||||    
T  40839119 acgattttgttcgatttaaaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaa 40839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 51473225 - 51473399
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  51473225 agcataggtggttggactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagtttaagg 51473322  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   ||||||||||||||||||||    
T  51473323 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 40275271 - 40275093
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| ||||||||||||||||| |||||| || |||| ||||||||||||         |||| |||||||||    
T  40275271 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaa-catagagtttaggg 40275173  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    || |||||||| |||||||||||||||||||||||||||| ||||  |||||||  ||||| ||||||||||||||||||    
T  40275172 acaattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 40275093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 41998406 - 41998225
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||| ||||| ||||||||||||||||| |||||||||||||||||         ||||||||||| ||    
T  41998406 agcataggtggttggactaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgc--aaaaaaacatatagtttaagg 41998309  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatt 195  Q
    ||||||||||| ||||||||| || ||||||||||||||  ||||  |||||||   |||| ||||||||||||||||||||||    
T  41998308 acgattttgttcgatttaaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaagcctatt 41998225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 43678657 - 43678830
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||  ||||||||| |||||||         ||||||||||| |||||    
T  43678657 ataggtggttgaactaaaactgtcatttatgtgcgtttctagagttggaaataggaagatatgactgaaactgcaaaaaa---catatagtttatggacg 43678753  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||||||| |||||||||||||| ||||||  ||||| |||| |||||||| | |||| ||||||||||||||||||    
T  43678754 attttgttcgatttaaaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcc 43678830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 49951916 - 49952092
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||||         ||| |||||||  |    
T  49951916 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgc---aaaaaacatgtagtttaatg 49952012  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||||||||| ||||| |||||| ||||  ||||||| | |||| ||||| ||||||||||||    
T  49952013 acgattttgttcgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcc 49952092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 51828910 - 51829086
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| || |||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  51828910 agcataggtggttggactaaaactgtcatttatgtgcgtttatgaagttggaaatagggagataggactaaaactgcaaaaaa---catatagtttaagg 51829006  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||||||||||||| |||||| || || |||||||||||| |||| |||||||||  | || ||||||||||||||||||    
T  51829007 acgattttgtttgaattaaaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaagcc 51829086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 52237189 - 52237361
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||| ||||||  ||||||||| |||||| |||||||||| |||||| ||||||||| |||| ||||||||||||         |||||| |||||||||    
T  52237189 catatgtggtttgactaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaa---catataatttagggac 52237285  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||| |||||||||||||||||||||||||||| ||||  |||||||  ||||| ||||||||||||||||    
T  52237286 gattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 52237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 22370758 - 22370599
Alignment:
Q  27 actaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgat 126  Q
    ||||||||| | |||| |||||||||||||||||||| ||| || |||| ||||||||||||         ||||||||||||||||||||||||||| |    
T  22370758 actaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaa--catatagtttagggacgattttgtttggt 22370661  T
Q  127 ttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||| |||||||||||||||||| ||||  ||||||| |||||| |||||||||||||||    
T  22370660 ttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 34105018 - 34105190
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||| || |||  ||||||||||||         ||||||||||||||    
T  34105018 agcataggtggttggactaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaa-catatagtttaggg 34105116  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaat 185  Q
    ||||||||||| ||||||||||||| |||||||  ||||||||||  ||||||| | |||| ||||||||||||    
T  34105117 acgattttgttcgatttaaaagagggaggaccaacttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 2051476 - 2051293
Alignment:
Q  11 aagcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc-nnnnnnnnncatatagtttag 109  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||  ||| || |||||||||          |||||||||||     
T  2051476 aagcataggtggttggactaaaactgtcatttttgtgcgtttctggagttagaaatagggaaataggaataaaactgcaaaaaaaaaacatatagtttaa 2051377  T
Q  110 ggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    | ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| ||||||||||||||||||||    
T  2051376 gaacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 2051293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 43678471 - 43678295
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||| |||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  43678471 agcataggtggttggactaaaactgtcatttatgtgcgcttctggagttggaaatagggagataagactaaaactgc---aaaaaacatatagtttaagg 43678375  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || || |||||| ||||| ||||  |||||||   |||| ||||||||||||||||||    
T  43678374 acgattttgttcgatttaaaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 43678295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 2044445 - 2044270
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| ||||||||| | |||| ||||||||||| ||||||||||||||| ||||||||||||||| |         |||||| |||| ||||    
T  2044445 cataggtggttggactaaaactgttatttatgtgcgtttcttgagttggaaatagggagatatgactaaaactcc---aaaaaacatataatttatggac 2044349  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||| ||||||||||||||| |||||||||| | ||||  ||||||| |||| | |||||||| ||||||||||    
T  2044348 gattttgttcgatttaaaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaagcct 2044270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 51473029 - 51472854
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         |||||| |||||||||    
T  51473029 cataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgc---aaaaaacatatactttagggac 51472933  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
     |||||||||||||||||||||||||||  | |||| | ||||  ||||||| | |||| ||||||| |||||||||||    
T  51472932 aattttgtttgatttaaaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaagcct 51472854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 14654561 - 14654736
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||| || |||| ||||||||||||          | |||||||| ||    
T  14654561 agcatagatggttgaactaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaa-----acatagtttacgg 14654655  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||||  ||| |||||| ||||  ||||||| | |||| |||||||||||||||||||    
T  14654656 acgattttgttcgatttaaaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 14654736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 32730565 - 32730387
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||| ||| ||||||||| |||||| ||||||||||| ||||||||||||||| |||| || |||||||||         ||||||||||||||    
T  32730565 agcataggtgattgaactaaaactgtcatttatgtgcgtttctagagttggaaatagggagatacgattaaaactgcaaaaaa---catatagtttaggg 32730469  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||  |||||||||||||||||||| ||||   ||||  ||||||| | |||| ||||||||||||||| ||||    
T  32730468 acgattttgttcaatttaaaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaattaaaccta 32730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 38535667 - 38535843
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||| ||||||| ||||||||| | |||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||||||||    
T  38535667 catatgtggttggactaaaactgtaatttatgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttagggac 38535763  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||| || |||||||||||| | |||| | |||||||||||  ||||||| |  ||| ||||||| ||||||||||||    
T  38535764 gattttattcgatttaaaagagatcggactaatttcgtaagttggtcaaaatgcacggaccaaaagtataattaagccta 38535843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 46013792 - 46013968
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  46013792 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagtttaagg 46013889  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    ||||||||||| ||||||||| || ||| |||||||| |  ||||  |||||||   || | |||||||||||||||||    
T  46013890 acgattttgttcgatttaaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaagc 46013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 38535477 - 38535307
Alignment:
Q  20 tggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgatttt 119  Q
    |||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| |||| |||||||         ||||||||||| ||||||||||    
T  38535477 tggttgaactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactgaaactgcaaaaaa---catatagtttaaggacgatttt 38535381  T
Q  120 gtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||| ||||||||| || ||||||||||||| | ||||  |||||||   |||| ||||||||||||||||||||    
T  38535380 gttcgatttaaaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 38535307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 32730759 - 32730944
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||| |||| || |||||||||         ||||||||||| ||    
T  32730759 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgc---aaaaaacatatagtttaagg 32730855  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttata 200  Q
    |||||||||||  |||||||| || ||||||||||||| | ||||  | |||||   | || |||||||||||||||| ||||||||||    
T  32730856 acgattttgttcaatttaaaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaattaagtctattttata 32730944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 49951722 - 49951549
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| | |||| ||||||||| ||||||||||||||||| |||| |||||||| |||         ||||||||||| ||    
T  49951722 agcatatgtggttggactaaaactgttatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaa---catatagtttaagg 49951626  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| |||||||||||||||    
T  49951625 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 50662782 - 50662958
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||| | || ||||||||||||         ||||||||||| ||    
T  50662782 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagctaggactaaaactgc---aaaaaacatatagtttaagg 50662878  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || || ||| |||||||| ||||  |||||||   |||| ||||||| ||||||||||    
T  50662879 acgattttgttcgatttaaaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaagcc 50662958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 52375503 - 52375327
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||  ||||||||| |||||| | ||||||||||||||| ||||||||| ||||  |||||||||||         ||||||||||||||    
T  52375503 agcatatgtggttagactaaaactgtcatttctatgcgtttctggagttagaaatagggagatagaactaaaactgcaaaaaa---catatagtttaggg 52375407  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||||||||||  |||||||||||||| |||||||||||| | ||  | |||||  ||||| ||||||||||||||||||    
T  52375406 acgattttgttcaatttaaaagaggtatgaccattttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaagcc 52375327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 41998600 - 41998775
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| |||||| || ||||| | || ||||||| |||||| |||||||| | || ||||||||||||         ||||||||| ||||    
T  41998600 agcataggtggttgaactaaatctatcattat-gtacgtttctagagttgaaaatagggag-taggactaaaactgcaaaaaaa--catatagtt-aggg 41998694  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||  ||||||| | |||| |||||||||||||||||||    
T  41998695 acgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 41998775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 191
Target Start/End: Complemental strand, 44676633 - 44676472
Alignment:
Q  27 actaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgat 126  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||| |||| ||||||| ||||         ||||||||||||||||| ||||||| |||    
T  44676633 actaaaactgtcatttctgtgcgtttcttgagttggaaatagggagataggactaaagctgcaaaaaa---catatagtttagggacggttttgttcgat 44676537  T
Q  127 ttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||||||||||| || || |||| | ||||  ||||||| | |||| ||||||||||||||||||    
T  44676536 ttaaaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagcc 44676472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 44676842 - 44677015
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||  ||||||||| |||||| |||||||||||||||||| |||||| | |||| |||||||| |||         ||||||||||| ||    
T  44676842 agcataggtggttagactaaaactgtcatttatgtgcgtttctggagttgaaaatagagagataggactaaaattgcaaaaaa---catatagtttaagg 44676938  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||| || || |||||||||||| ||||  |||||||   |||| |||||||||||||||    
T  44676939 acgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 51828327 - 51828504
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||||| |||| ||||||||| |||||| | ||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  51828327 agcataggtagttggactaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagtttaagg 51828424  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    || |||||||| ||||||||| |  || |||||||||||| ||||  ||||| |   |||| ||||||||||||||||||    
T  51828425 acaattttgttcgatttaaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaagcc 51828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 49720769 - 49720908
Alignment:
Q  50 tttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatttaaaagaggtaggaccattttc 149  Q
    ||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||||||||||||| ||||||||| || || ||||||||||    
T  49720769 tttctggagttggaaatagggagataagactaaaactgcaaaaaa---catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttc 49720865  T
Q  150 gtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    || ||||  ||||||||  |||| |||||||||||||||||||    
T  49720866 gtgagttggtcaaaatagtaggaccaaaagtgtaattaagcct 49720908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 30513898 - 30513724
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||||||| || ||||||||| |||||| |||||||||||| |||| |||||| || |||||||||||||||||         |||||||||||  |    
T  30513898 agcataggtggctggactaaaactgtcatttctgtgcgtttctgaagttcgaaatatggagatatgactaaaactgc--agaaaaacatatagttta-ag 30513802  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||| || ||||||||| || ||||||||||||||| ||||  ||||||| | |||| ||||| ||||||||||    
T  30513801 acgattttattcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaag 30513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 43222765 - 43222935
Alignment:
Q  18 ggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaa-tagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgat 116  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||| ||||||| |  ||||||||||||         |||| ||||||||||||||    
T  43222765 ggtggttggactaaaactgtcatttttgtgcgtttctggagttgaaaaataggggg-tgggactaaaactgcaaaaaaa--cataaagtttagggacgat 43222861  T
Q  117 tttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    |||||| ||||||||||||| | ||||||||||||  | |  ||||||| |||||| ||||||||| |||||||    
T  43222862 tttgttcgatttaaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaagtgtgattaagc 43222935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 192
Target Start/End: Original strand, 16701168 - 16701339
Alignment:
Q  21 ggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttg 120  Q
    ||||| ||||||||| | ||||   ||||||| ||||||||||||||||| |||||||||||||||||         ||||||||||| |||||||||||    
T  16701168 ggttggactaaaactgtaatttcgatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaaaacatatagtttaaggacgattttg 16701267  T
Q  121 tttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    || || |||||| || || |||||||||||| ||||  |||||||   |||| ||||| |||||||||||||    
T  16701268 ttcgaattaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagcct 16701339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 16689496 - 16689352
Alignment:
Q  50 tttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatttaaaagaggtaggaccattttc 149  Q
    |||||||||| |||||||||| |||| ||||||||||||         |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||    
T  16689496 tttctggagtcggaaatagggtgataggactaaaactgcaaaaaa---catatattttatggacgattttgttcgatttaaaagaggtaggaccaatttc 16689400  T
Q  150 gtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    || ||||  ||||||| | |||| ||||| ||||||||| ||||||||    
T  16689399 gtgagttggtcaaaatgctaggaccaaaactgtaattaaacctatttt 16689352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 34104813 - 34104664
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||||||||||||||||||| |||||||| || |||||||||||||||||         |||||||||||  |    
T  34104813 agcataggtggttggactaaaaatgtcatttttgtgcgtttctggagctggaaata-ggagatatgactaaaactgc---aaaaaacatatagtttaatg 34104718  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaat 165  Q
    |||||||||||  |||||||| || ||| ||||||||||| ||||  |||||||    
T  34104717 acgattttgttcaatttaaaaaagatagaaccattttcgtgagttggtcaaaat 34104664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 36701196 - 36701105
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||| ||||||||||||| ||||| ||||||| | || ||||||||| |||| |||||||| |||||| |||||||||||||||||||    
T  36701196 atagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaagcct 36701105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 37075848 - 37075687
Alignment:
Q  28 ctaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatt 127  Q
    |||||||  |||||| | |||||||||||||||| ||||| | || || ||||||||||||         |||||||||||||||||  |||||||||||    
T  37075848 ctaaaacggtcatttctctgcgtttctggagttgaaaataagagg-taggactaaaactgcaaaaaaaaacatatagtttagggacgggtttgtttgatt 37075750  T
Q  128 taaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    | ||||||| |||||||||||||| ||||  ||||||| ||  || |||||||||||||||||    
T  37075749 tgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaagc 37075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 33412609 - 33412702
Alignment:
Q  100 tatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||||||||||||| ||||  ||||||  || ||||||||||| || | |||||||| |||||| ||||||||||||||||||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaagccta 33412702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 14654292 - 14654197
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||  |||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   || ||||||||||||||||||||||    
T  14654292 catatagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaagccta 14654197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 39010250 - 39010074
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| ||||| ||| |||||||| |||||||| ||| |||||||||||||         |||| |||||| |     
T  39010250 agcatatgtggttggactaaaactatcatttatgtgc-tttatggagttgaaaatagggagatgtgactaaaactgc---aaaaaacatacagtttaaga 39010155  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    || |||||||| ||||||||||||||| || || ||| || ||||  ||||||| | |||| ||||| |||||||||||||    
T  39010154 acaattttgttcgatttaaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcct 39010074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 43222566 - 43222446
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttg-gaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagg 110  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||||||  |||||||||| || || ||||| |||         |||||||||||||    
T  43222566 agcataggtggttggactaaaactgtcatttttgtacgtttctggagttgaaaaataggggg-taggattaaaaatgc---aaaaaacatatagtttagg 43222471  T
Q  111 gacgattttgtttgatttaaaagag 135  Q
    |||||||||||| ||||||||||||    
T  43222470 gacgattttgttcgatttaaaagag 43222446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 49407889 - 49407794
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||| |||||||||||| |||||||  |||| ||||||| | |||||||||||| || |  ||||||| |||||| ||||||||||||||||||||    
T  49407889 cataaagtttagggacggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagccta 49407794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 50900980 - 50901075
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||||||| ||||||| |||||  |||||| ||| ||||||| || || |  ||||||| |||||| ||||||||||||||||||||    
T  50900980 catatagtttagggacggttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagccta 50901075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 27199795 - 27199697
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattt 196  Q
    |||||||||||| |||| ||||||| ||||| ||||||| | |||||||||||| || |  ||||||| |||||| ||||| ||||||||| |||||||    
T  27199795 catatagtttagtgacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaaacctattt 27199697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 329939 - 329850
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaatta 187  Q
    ||||||||||| ||||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   || | ||||||||||||||    
T  329939 catatagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcgtgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 37076131 - 37076219
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    |||||||||| ||||||||||| ||||| |||||||  ||||||||||||| || | |||||||| |||||| ||||| |||||||||||    
T  37076131 atagtttagg-acgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaagc 37076219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 36701552 - 36701640
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||| ||||||||| ||||| ||||||  | |||||||||||| || |  ||||||| |||||| ||||||||||||||||    
T  36701552 atagtttagggatgattttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 191
Target Start/End: Complemental strand, 55192277 - 55192118
Alignment:
Q  28 ctaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatt 127  Q
    |||||||| |||||| | |||||||||||||||| ||||||| || || |||||||||| |         ||||||||||| ||||| ||||||||||||    
T  55192277 ctaaaactgtcatttctctgcgtttctggagttgaaaataggagg-taggactaaaactacaaaaaa---catatagtttatggacggttttgtttgatt 55192182  T
Q  128 taaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    | |||||||   |||||||||||| || |  ||||||| || |||  |||||||||||||||||    
T  55192181 tgaaagaggcgagaccattttcgtgagctggtcaaaatgcggggactaaaagtgtaattaagcc 55192118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 8874139 - 8874229
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||||||| | ||||||| ||||||||||| | |||||||||||||| || |  ||||||  || |||| ||||||||||||||    
T  8874139 catatagtttagggaaggttttgttcgatttaaaagaagcaggaccattttcgtgagctggtcaaaacgcggggatgaaaagtgtaattaa 8874229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 12141147 - 12141237
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||| || | ||||||| ||||| |||||||||||||||||| ||| |  | || ||||| |||||| ||||||||||||||||||    
T  12141147 atagtttagagatggttttgttcgatttgaaagaggtaggaccatttacgtgatctgataaaaatgcgaggaacaaaagtgtaattaagcc 12141237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 27200078 - 27200239
Alignment:
Q  28 ctaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncat-atagtttagggacgattttgtttgat 126  Q
    ||||| || |||||| | |||||||||||||||| ||||||| || |||||||||||||||         ||| |||||||||| ||| | ||||| |||    
T  27200078 ctaaacctgtcatttctctgcgtttctggagttgaaaataggagg-tatgactaaaactgcaaaaaa---catgatagtttagg-acggtattgttcgat 27200172  T
Q  127 ttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    || ||||||| || ||||||||||| || |  ||||||| | |||| ||||||||||||||||||||    
T  27200173 ttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagccta 27200239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 29801930 - 29801963
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||||||||||||||||||||||||    
T  29801930 caaaatacgaggatcaaaagtgtaattaagccta 29801963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 12141026 - 12140931
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    |||||||||||||| |||| || ||||| ||||||| | |||||||||||| |  | || |||||||||||| |||||||| || ||||||| ||||    
T  12141026 atagtttagggacg-ttttcttcgatttgaaagaggcatgaccattttcgtgatctgataaaaatacgaggaacaaaagtgcaagtaagcctttttt 12140931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 50900621 - 50900534
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||| ||| ||||||| ||||| |||||| ||||||||||||||| || | ||||||||  || || ||||||| ||||||||    
T  50900621 atagtttagg-acggttttgttcgatttgaaagagttaggaccattttcgtgagctgatcaaaatttgaagaccaaaagtttaattaag 50900534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 14654361 - 14654310
Alignment:
Q  18 ggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagg 69  Q
    |||||||| ||||||||| |||||| |||||||||  |||||||||||||||    
T  14654361 ggtggttggactaaaactgtcatttctgtgcgtttacggagttggaaatagg 14654310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 50116903 - 50116954
Alignment:
Q  140 gaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||| |||||| ||| | |||||| ||||||||||||||||||||||||||    
T  50116903 gaccaatttcgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 37220588 - 37220554
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||||||||||| |||||||||||||||||||||    
T  37220588 caaaatacgaggaccaaaagtgtaattaagcctat 37220554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 8873770 - 8873694
Alignment:
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||| ||||||| ||||||||||||  | ||||||||||||||  | |||||||| |||||| ||||| |||||||||    
T  8873770 gacggttttgttcgatttaaaagagacatgaccattttcgtaaactgatcaaaatgcgaggaccaaaa-tgtaattaa 8873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 23644493 - 23644456
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  23644493 caaaatacgaggaccaaaagtgtaattaagcctttttt 23644456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 25611529 - 25611497
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||| |||||||||||||||||||||||||||    
T  25611529 caaaacacgaggatcaaaagtgtaattaagcct 25611497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 30104551 - 30104480
Alignment:
Q  121 tttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||| |||||||| || ||||||| |||||| |||   |||||| ||||||| ||||||||||||||||||||    
T  30104551 tttgttttaaaag-ggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 30104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 37222085 - 37222125
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctattttata 200  Q
    ||||| ||||||| ||||||||||||||||||||| |||||    
T  37222085 caaaacacgaggaccaaaagtgtaattaagcctatattata 37222125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 6e-55; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 42192612 - 42192790
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||         ||| ||||||||||    
T  42192612 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaaa--catctagtttaggg 42192709  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||  ||||||| |||||| |||||||||||||||||||    
T  42192710 acgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcct 42192790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 11540008 - 11540190
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||  ||||||||||||||||         ||||||||||| ||    
T  11540008 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaa---catatagtttatgg 11540104  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||  ||||||| ||| || ||||||| ||||||||||||||||    
T  11540105 acgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaagcctatttt 11540190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 20128107 - 20128285
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| |||         ||||||||||| ||    
T  20128107 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaa---catatagtttaagg 20128203  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||  | ||||| | |||| ||||||||||||||||||||    
T  20128204 acgattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagccta 20128285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 42192416 - 42192240
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| ||||||||||||||||| ||||||||| |||| ||||||||||||         ||||||||||||||    
T  42192416 agcatatgtggttggactaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaa---catatagtttaggg 42192320  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||  |||||||  ||||| ||||||||||||||||||    
T  42192319 acgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 42192240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 38008127 - 38007948
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||| ||||| | ||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||         ||||||||||||||    
T  38008127 agcataggcggttggattaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaa--catatagtttaggg 38008030  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||| | |||| ||||||||||||||||||||    
T  38008029 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 38007948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 44220013 - 44220192
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaataggggga--tatgactaaaactgcnnnnnnnnncatatagtttag 109  Q
    |||||||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||||  ||||||||||||| |         ||||||||||||    
T  44220013 agcataggtggttggactaaaattatcatttttgtacgtttctggagttggaaatagggggagatatgactaaaactacaaaaaa---catatagtttag 44220109  T
Q  110 ggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||||||||||||||| ||||| |||||||||||| ||||  ||||||| ||||||  ||||||||||||||||||    
T  44220110 ggacgattttgtttgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaagcct 44220192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 4355929 - 4355755
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||| |||| ||||||||||||         ||||||||||||||||    
T  4355929 cataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaa---catatagtttagggac 4355833  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||| ||||||||||||||| ||||| |||||| |||   ||||||| | |||| ||||||||||||||||||    
T  4355832 gattttgttcgatttaaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagcc 4355755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 38008321 - 38008503
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  38008321 agcataggtggttggactaaaactatcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaagg 38008417  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| ||||||||||||||||||| ||||    
T  38008418 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctttttt 38008503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 11539814 - 11539636
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  11539814 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagtttaagg 11539717  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||| |  ||||||||||||||| ||||  |||||||   |||| |||||||||||||||||||    
T  11539716 acgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 11539636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 63328 - 63516
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnn---catatagttta 108  Q
    |||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||  |||| ||||||||||||            |||||||||||    
T  63328 agcataggtggttggactaaaactgtcatttatgtgcgtttctagagttggaaataggaagataggactaaaactgcaaaaaaaaaaaacatatagttta 63427  T
Q  109 gggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||  ||||||||| |||| ||||| | ||||||| ||||||||    
T  63428 gggacgattttgtttgatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaaacctatttt 63516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 16175719 - 16175908
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  16175719 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagtttaagg 16175816  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttataata 203  Q
    ||||||||||| ||||||||||||||| ||||| |||||| ||||  | |||||   |||| |||||||||||||| ||||| | |||||||    
T  16175817 acgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaattatgcctaatatataata 16175908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 210
Target Start/End: Complemental strand, 15550842 - 15550654
Alignment:
Q  20 tggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgatttt 119  Q
    |||||| ||||||||| |||||| |||||||||||||||||| ||||||||  ||| ||||||||||||         ||||||||||||||||||||||    
T  15550842 tggttgaactaaaactgtcatttctgtgcgtttctggagttgaaaatagggaaataggactaaaactgcaaaaaaa--catatagtttagggacgatttt 15550745  T
Q  120 gtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttataatataagaga 210  Q
    ||| ||||||||||||||||||||| |||||| ||||  ||| ||| | |||||||||||||||||||| |||| | | || |||||||||    
T  15550744 gttcgatttaaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaaacctaatatttattataagaga 15550654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 63133 - 62955
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  63133 agcataggtggttggactaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaagg 63037  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||| ||| |||||||||||||||||| ||||  |||||||   |||| || |||||||||||||||||    
T  63036 acgattttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaagccta 62955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 649702 - 649526
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||||||| || ||||||||  |||||| ||||||||||||||||||||||||||| || |  |||||||||||         ||||||||||||||    
T  649702 agcataggtggctggactaaaacg-tcatttatgtgcgtttctggagttggaaatagggagacagaactaaaactgcaaaaaa---catatagtttaggg 649607  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||  |||| || | |||| |||||||||||||||||||    
T  649606 acgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaagcct 649526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 20127910 - 20127724
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| ||||||| | |||||||||||||||||||| ||||||||||||| |||| ||||||||||||         ||||||||||| |||||    
T  20127910 ataggtggttggactaaaattgtcatttttgtgcgtttctggggttggaaatagggagataggactaaaactgcaaaaaaa--catatagtttaaggacg 20127813  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttataata 203  Q
    |||||||| ||||||||| || ||||||||||||||| | ||  |||||||   |||| ||||||||||||||||||| |||| |||||    
T  20127812 attttgttcgatttaaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaagccttttttttaata 20127724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 32418333 - 32418158
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||| |||||||||||||||||||||||| || |||||||||||||||||          |||||||||||||    
T  32418333 agcataggtggttggactaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaat---atatagtttaggg 32418237  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||  ||||||||||||||| |||||| ||||  ||||||| | |||| || ||||||||||||||||    
T  32418236 acgattttgttcgatt--aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaagcct 32418158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 6949625 - 6949450
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||| | |||||    
T  6949625 ataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagttaaaggacg 6949528  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||| ||||||||| || ||||||||||||||| ||||| |||||||   |||| ||||| |||||||||||||    
T  6949527 attttgttcgatttaaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaagcct 6949450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 33920981 - 33921160
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||| |||| ||||||||||||         ||| |||||||  |    
T  33920981 agcataggtggttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgc--aaaaaaacatttagtttaaag 33921078  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| ||||||||||||||||||||    
T  33921079 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 33921160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 43160184 - 43160007
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||  ||||||||| |||||| |||||||||||||||||| |||||||| |||| ||||||||||||           ||||||||||||||    
T  43160184 cataggtggttagactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaaatg--tatagtttagggac 43160087  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||| ||||||||||||||| ||||| |||||| |||| |||||||| | |||| ||||| ||||||||| ||||    
T  43160086 gattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaatccta 43160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 43216079 - 43216256
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||| ||||| ||||||||||||||||||| | |||| ||||||||||||          |||||||||||||    
T  43216079 agcataggtggttggactaaaattgtcatttctgtgcatttctggagttggaaatagagagataggactaaaactgcaaaaaat---atatagtttaggg 43216175  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||  | ||||  ||||||||||||||||||    
T  43216176 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagcct 43216256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 24140064 - 24140222
Alignment:
Q  27 actaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgat 126  Q
    ||||||| | |||||| |||||||||||||||||||||||||||  |||  |||||||||||          |||||||||| |||||||||||||||||    
T  24140064 actaaaaatgtcatttctgtgcgtttctggagttggaaatagggatatagaactaaaactgcaa--------atatagtttatggacgattttgtttgat 24140155  T
Q  127 ttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||| |||||||||||||||||| ||||  |||| || |||||| ||||||||||||||||||||    
T  24140156 ttaaaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaagccta 24140222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 16953304 - 16953479
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||| |||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         |||||| |||||||    
T  16953304 agcatagttggttggactaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgc---aaaaaacatatactttaggg 16953400  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    ||  ||||||| ||||||||||||||||||||| |||| | ||||  ||||||| | |||| |||||||||||||||||    
T  16953401 acatttttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 44219820 - 44219641
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||| ||| ||||||||| |||||| |||||||||||||||||||||| |||| |||| ||||||||||||         |||||| |||| ||    
T  44219820 agcataggtgattggactaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgc---aaaaaacatataatttaagg 44219724  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    || |||||||| ||||||||| |||||||| |||||| || |||| ||||||||   |||| |||||||||||||||||||||    
T  44219723 acaattttgttcgatttaaaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaagcctat 44219641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 4809249 - 4809431
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||||||||| ||| || |||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  4809249 agcataggtggttggactaaaactgtcatttttgtgcttttttgtagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaagg 4809345  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    |||| ||||||  |||||||| |  ||||||||||||||| ||||| |||||||   |||| ||||||||||||||||||| ||||    
T  4809346 acgactttgttcaatttaaaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaagcctttttt 4809431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 33920788 - 33920615
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||||||| || ||||||||| |||||| | |||||||||||||||| |||||||| |||| ||||||||||||         ||||||||||||||    
T  33920788 agcataggtggctggactaaaactgtcatttctatgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaat---catatagtttaggg 33920692  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||||||||| || || |||||| ||||  ||||||| | |||| ||||| |||||||||    
T  33920691 acgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 197
Target Start/End: Original strand, 43160382 - 43160563
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    ||||| |||||| | ||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||||    
T  43160382 catagatggttggattaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagtttaaggac 43160479  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||| ||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| | ||||||||||||||||| ||||    
T  43160480 gatttagttcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaagcctttttt 43160563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 13315673 - 13315484
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgttt-ctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagg 110  Q
    |||||||||||||| ||||||||| |||||| ||||| ||| |||||||||||||||||| |||| ||||||||||||         ||||||||||| |    
T  13315673 agcataggtggttggactaaaactgtcatttctgtgcattttctggagttggaaatagggagataggactaaaactgcaaaaaaaaacatatagtttaag 13315574  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttata 200  Q
    |||||||||||| ||||||||| || || |||||||||| | ||||  |||||||   ||||  |||||||||||||| |||| ||||||    
T  13315573 gacgattttgttcgatttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaaacctactttata 13315484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 4356126 - 4356304
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||  |||  | |||||||||         ||||||||||| ||    
T  4356126 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggaaatagaattaaaactgc---aaaaaacatatagtttaagg 4356222  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||| || || ||||||| |||| ||||  |||||||   |||| ||||||||||||||||||||    
T  4356223 acgattttgttcgatttaaaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaagccta 4356304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 4809055 - 4808905
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||  |||| |||||||||| |         ||||||||||| ||    
T  4809055 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactac---aaaaaacatatagtttatgg 4808959  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaat 165  Q
    ||||||||||| |||||||||||||||||| || |||||| ||||  |||||||    
T  4808958 acgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaat 4808905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 16953113 - 16952934
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||||| |||| ||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||| ||         ||||||||||| ||    
T  16953113 agcataggtagttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgc-aaaaaaaacatatagtttaagg 16953015  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||| || || ||| |||||||| ||||  |||||||   |||| ||||||| |||||||||||    
T  16953014 acgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcct 16952934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 17061084 - 17060905
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||||| |||| ||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||| ||         ||||||||||| ||    
T  17061084 agcataggtagttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgc-aaaaaaaacatatagtttaagg 17060986  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||| || || ||| |||||||| ||||  |||||||   |||| ||||||| |||||||||||    
T  17060985 acgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagcct 17060905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 13399583 - 13399462
Alignment:
Q  27 actaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgat 126  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         |||||||||||||||||||||||||  ||    
T  13399583 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttagggacgattttgttccat 13399487  T
Q  127 ttaaaagaggtaggaccattttcgt 151  Q
    |||||||||||| ||||| ||||||    
T  13399486 ttaaaagaggtatgaccaatttcgt 13399462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 5560920 - 5560996
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  5560920 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc 5560996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 9330164 - 9330338
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| | || ||||||  ||||| |||||||  |||| ||||||||||||         |||||||||| |||    
T  9330164 agcataggtggttggactaaaactgtcatttctatgtgtttctatagttgaaaataggtagataggactaaaactgcaaaaaaa--catatagtttgggg 9330261  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||||||||| ||| | |||||| ||||  ||||||| | |||| |||||||||||||||    
T  9330262 acgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 25336054 - 25336148
Alignment:
Q  99 atatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||| |||||| ||||  ||||||| | |||| ||||||||||||||||||||    
T  25336054 atataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 25336148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 6949898 - 6949990
Alignment:
Q  99 atatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||| |||||| ||||  ||||||| | |||| ||||||||||||||||||    
T  6949898 atatagtttagggacgattttgttctatttaaaagatgtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 6949990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 28143485 - 28143577
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||||||| || |  ||||||| |||||| |||||||| |||||||||||    
T  28143485 atagtttagggacgattttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagccta 28143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 13399790 - 13399939
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| | ||||||| |||||| | ||||||| ||||||||||||||||| |||||||||||||||||          |||||||||| ||    
T  13399790 agcataggtggttggattaaaactgtcatttctatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaat---atatagtttaagg 13399886  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaat 165  Q
    || |||||||| |||||||||||  || |||||||||||| ||||  |||||||    
T  13399887 acaattttgttcgatttaaaagaaata-gaccattttcgtgagttggtcaaaat 13399939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 15551044 - 15551223
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| | |||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||  ||| ||    
T  15551044 agcatatgtggttggactaaaactattatttatgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaaacatataacttaagg 15551141  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||| |  || ||||||||| || ||||  |||||||   |||  ||||||||||||||| ||||    
T  15551142 acgattttgttcgatttaaaaaatatatgaccatttttgtgagttggtcaaaatggtagggccaaaagtgtaattaaaccta 15551223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 31797230 - 31797329
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||||||||| ||||||| ||||| ||||||| | |||||||||||| || |  |||||||  ||||| ||||||||||||||||||| ||||    
T  31797230 catatagtttagggacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagcctttttt 31797329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 20495283 - 20495191
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||||||||||||| ||||||||||||| | || ||||||||| ||||  ||||||| |||| | |||||||| |||||| ||||    
T  20495283 atagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtgaaattaaaccta 20495191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 43215883 - 43215809
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    |||||||||||| ||||||||| |||||| | | ||||| |||||||| |||||||| |||||||||||||||||    
T  43215883 cataggtggttggactaaaactgtcatttctattcgtttttggagttgaaaatagggagatatgactaaaactgc 43215809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 5560143 - 5560050
Alignment:
Q  99 atatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||||| |||||||||||||  |||||||| || || |||||||||||| ||||  |||||||   |||| |||||||||||||||||||    
T  5560143 atatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 5560050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 193
Target Start/End: Original strand, 32418550 - 32418694
Alignment:
Q  46 tgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatttaaaagaggtaggaccat 145  Q
    ||||||||| ||||||||||||||| |||| || |||||||||          |||||||||| ||||||||||||| |||||||||||||||| | ||     
T  32418550 tgcgtttctagagttggaaatagggagataagattaaaactgcaaaaaat---atatagtttaaggacgattttgttcgatttaaaagaggtagaatcaa 32418646  T
Q  146 tttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||| | ||  |||||||   |||| ||||||| ||||||||||||    
T  32418647 tttcgtgaattggtcaaaatgataggaccaaaagtataattaagccta 32418694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 649802 - 649886
Alignment:
Q  110 ggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||||||||||| ||||||||| |  ||||||||||||||| ||||  |||||||   |||| |||||||||||||||| ||||    
T  649802 ggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaagtctat 649886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 22445816 - 22445741
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactg 87  Q
    |||||||||||||  ||||||||| |||||| |||| ||||||| ||||| |||||||| ||||  ||||||||||    
T  22445816 agcataggtggtttgactaaaactgtcatttatgtgtgtttctgaagttgaaaatagggagatagtactaaaactg 22445741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 5035953 - 5035900
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaag 154  Q
    |||||||||||||| ||||||| ||||||||| ||  |||||||||||||||||    
T  5035953 atagtttagggacggttttgttcgatttaaaaaagacaggaccattttcgtaag 5035900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 9330056 - 9329985
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaa 84  Q
    |||||| ||||||| ||| ||||| |||||| ||||||||||| |||||||||||| || |||| ||||||||    
T  9330056 agcataagtggttg-actgaaactgtcatttctgtgcgtttctagagttggaaataaggagataggactaaaa 9329985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 14942306 - 14942394
Alignment:
Q  105 tttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||| |||| |||||||| ||||| ||||||  | |||||||||||| || |  ||||||| ||| || ||||||||||||||||||||    
T  14942306 tttatggacaattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagccta 14942394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 5037155 - 5037202
Alignment:
Q  102 tagtttagggacgattttgtttgatttaaaagaggtaggaccattttc 149  Q
    |||||||||||||||||||||  |||||||||||| | ||||||||||    
T  5037155 tagtttagggacgattttgttcaatttaaaagaggcatgaccattttc 5037202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 35779761 - 35779698
Alignment:
Q  138 aggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttataa 201  Q
    |||||||||||||| |||   |||||| ||||||| |||||||||||||||||| || ||||||    
T  35779761 aggaccattttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagccaatattataa 35779698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 15551550 - 15551501
Alignment:
Q  140 gaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||| ||| || ||||| ||||||| ||||||||||||||||    
T  15551550 gaccattttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 28847171 - 28847251
Alignment:
Q  121 tttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttataat 202  Q
    |||| ||||||||||  ||||||| |||||| |||  | ||||| ||||||| ||||| ||||||||||||||| |||||||    
T  28847171 tttgttttaaaagagc-aggaccagtttcgtgagtagaccaaaacacgaggaccaaaaatgtaattaagcctatattataat 28847251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 43058846 - 43058879
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||| ||||||||||||||||||||||||||||    
T  43058846 caaaacacgaggatcaaaagtgtaattaagccta 43058879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 2190536 - 2190612
Alignment:
Q  105 tttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtg 181  Q
    |||||||||||||||||| ||||| ||| ||| ||||||| |||||| || |  ||||||| ||| || ||||||||    
T  2190536 tttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgaccaaaagtg 2190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 5561019 - 5561083
Alignment:
Q  124 gatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||||||||||||| || |||||| ||||| | ||||| | |||| |||||| ||||||||    
T  5561019 gatttaaaagaggtaggatcaatttcgtgagttagttaaaatgcaaggaccaaaagggtaattaa 5561083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 7446373 - 7446341
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||| |||||||||||||||||||||||||||    
T  7446373 caaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 9747596 - 9747520
Alignment:
Q  116 ttttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||| ||||||||| ||| || |||| |||||| ||    ||||||| ||||||||||||||| ||||||||||    
T  9747596 ttttgttggatttaaaaaaggcagaaccaatttcgtgagcatgtcaaaatgcgaggatcaaaagtgcaattaagcct 9747520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 11091034 - 11091070
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctattt 196  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  11091034 caaaacacgaggaccaaaagtgtaattaagcctattt 11091070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 18451295 - 18451378
Alignment:
Q  110 ggacgattttgtt-tgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||| |||||||| || |||||||| || ||||||| ||||||||||    ||||| ||||||| ||||||||||||||||||||    
T  18451295 ggactattttgttctgttttaaaag-ggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18451378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 9e-48; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 18150093 - 18150279
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||  |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||||||    
T  18150093 agcataggtggttgaactaaaacggtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaa--catatagtttaggg 18150190  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttata 200  Q
    | ||||||||| ||||||||||||||||||||| |||||| ||||  ||||||||| ||||||| ||||||||||||||||| ||||||    
T  18150191 atgattttgttcgatttaaaagaggtaggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaagcctagtttata 18150279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 21371066 - 21371244
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| |||||||| |||         ||||||||||||||    
T  21371066 agcataggtggttgaactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaa---catatagtttaggg 21371162  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||||||||||||||||||||||| |||  | ||||  ||||||| | |||||||||||||||||||||||||    
T  21371163 acgattttgtttgatttaaaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaagccta 21371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 15115465 - 15115640
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| ||||||||| | ||||||||||||||| |||||||||||||||||          |||||||||| ||    
T  15115465 agcatatgtggttgaactaaaactgtcatttatgtgcgttttttgagttggaaatagggcgatatgactaaaactgcaaaa------atatagtttaagg 15115558  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||  |||||||  ||||||||||||||||||||||||||    
T  15115559 acgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaagccta 15115640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 28289858 - 28289683
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| |||||||||||          |||||| |||||||||    
T  28289858 cataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactg---gaaaaaacatataatttagggac 28289762  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||| ||||||||||||||| ||| | |||||| ||||  ||||||| | ||||||||||||||||||||||||    
T  28289761 gattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 28289683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 195
Target Start/End: Original strand, 15029679 - 15029859
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||| |||   |||||||||||         ||||||||||| ||    
T  15029679 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaa---catatagtttaagg 15029775  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatt 195  Q
    ||||||||||| ||||||||| ||||| |||||||||||| ||||  |||||||  ||||| ||||||||||||||||||||||    
T  15029776 acgattttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagcctatt 15029859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 28290014 - 28290193
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  28290014 agcatagatggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaagg 28290110  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||||||||| |||||||||  | ||||||||||||||| ||||  |||||||   |||| |||||||||||||||||||||    
T  28290111 acgattttgttcgatttaaaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctat 28290193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 4967139 - 4967319
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| ||||||||||| ||||| |||||||||  ||| ||||||||||||         ||||||||||||||    
T  4967139 agcatatgtggttggactaaaactatcatttatgtgcgtttctagagttagaaatagggatataggactaaaactgcaaaaaaaa-catatagtttaggg 4967237  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||| ||||||||| || ||||  |||||||  ||||| ||||||||||||||||||||    
T  4967238 acgattttgttcgatttaaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccta 4967319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 19291533 - 19291356
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||| || |||| ||||||||||||         ||||||||||| ||    
T  19291533 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaa--catatagtttaagg 19291436  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || |||||||||||| || ||||  ||||||||  |||| ||||||||||||||||||    
T  19291435 acgattttgttcgatttaaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaagcc 19291356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 32697593 - 32697771
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||  | |||||| |||| |||||||||||||||||||||| | ||| |||||||||||         ||||||||||||||    
T  32697593 agcataggtggttggactaaatttgtcatttctgtgtgtttctggagttggaaatagggaggtatcactaaaactgcaaaataaaacatatagtttaggg 32697692  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    |||||| |||| ||||||||||||||||||||| |||||| ||||  ||||||| | | || |||||||||||||||||    
T  32697693 acgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaagc 32697771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 4966991 - 4966819
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||||||||||  | |||||| |||||| ||||| ||||| |||||||||||||||| ||||||||||||||||         ||||||||||||||    
T  4966991 agcataggtggttggcccaaaactgtcatttctgtgcatttctagagttggaaatagggg-atatgactaaaactgctaaaaa---catatagtttaggg 4966896  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||||||| || || |||||||| ||||  ||||||| |||||| |||||||||||||||    
T  4966895 acgattttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 38900818 - 38900648
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| |||||  || |||||| ||| ||||| ||||||||||||||||| |||| ||||||||||||         |||||| |||||||    
T  38900818 agcataggtggttggactaa--ctgtcatttatgtacgtttatggagttggaaatagggagataggactaaaactgcaaaaaa---catataatttaggg 38900724  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaatta 187  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||  ||||||| |||||| ||||||||||||||    
T  38900723 acgattttgttcgatttaaaagaggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 8418991 - 8419165
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||| ||| | ||||| | |||||| ||||||||||||||||||||||||||| |||| ||||||||||||          |||||||||| ||    
T  8418991 agcataggtgtttggattaaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa----atatagtttaagg 8419086  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    |||||||||||  |||||||| || ||||||||| ||||| ||||  |||||||   |||| |||||||||||||||||    
T  8419087 acgattttgttcaatttaaaaaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 8419165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 38901020 - 38901186
Alignment:
Q  20 tggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgatttt 119  Q
    |||||| ||||||||| |||||| |||||||||||||  ||||||||| || ||||| |||||||||||         ||||||||||| ||||||||||    
T  38901020 tggttggactaaaactgtcatttatgtgcgtttctgg--ttggaaataaggagatataactaaaactgcaaaaaa---catatagtttaaggacgatttt 38901114  T
Q  120 gtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||| |||||||||  |||||||||||||||||   ||| |||||||   |||| ||||||||||||||||||    
T  38901115 gttcgatttaaaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaagcc 38901186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 22651521 - 22651347
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncat-atagtttagg 110  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||||| ||||| || | || ||||||||||||         ||| |||||||| |    
T  22651521 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttgaaaataaggaggtaggactaaaactgc----aaaaacatgatagtttaag 22651426  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    || | ||||||||||||||||||||| | |||||||| ||| || |  |||||||||||| | ||||| ||||||||||    
T  22651425 gatggttttgtttgatttaaaagaggcatgaccatttccgtgagctggtcaaaatacgagaaccaaaaatgtaattaag 22651347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 18149826 - 18149730
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||||||||| ||||||||||||| ||||||||| || ||||||||||||||| ||||  || ||||   ||||||||||||||||||||||||||    
T  18149826 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtccaaatggtaggatcaaaagtgtaattaagcctat 18149730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 39083536 - 39083361
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||| ||| ||||||||| |||||| |||| ||||||||||||||||||| || |||||||||||||||||          |||||||||| |     
T  39083536 agcatatgtgattggactaaaactgtcatttctgtgtgtttctggagttggaaatatggagatatgactaaaactgcaaaaaatat-atatagtttaaga 39083438  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    || |||||||| ||||||||| |  ||||||||||||||| ||||  |||||||   |||||| ||||||||||||||    
T  39083437 acaattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggatc-aaagtgtaattaag 39083361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 20266371 - 20266463
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||||||||||||| ||||| ||||||  | ||||||||||||||| |  |||||||||||||| |||||||| |||||| ||||    
T  20266371 atagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaaaatacgaggaccaaaagtgcaattaaaccta 20266463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 14340792 - 14340953
Alignment:
Q  27 actaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgat 126  Q
    ||||||||| |||||| | | ||||| |||||||||||||| || |||| |||||||||| |          |||||||||| ||||||||||||| |||    
T  14340792 actaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaactacaaaaaaaaatatatagtttatggacgattttgttcgat 14340891  T
Q  127 ttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||| ||| ||||| |||||| ||||  ||||||| | || | ||||| |||||||||    
T  14340892 ttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaa 14340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 17260676 - 17260769
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    |||||||||||| | ||||||| ||||| |||||||||| | ||||||||| | ||  ||||||| |||||| |||||||| ||||||||||||    
T  17260676 atagtttagggatggttttgttcgatttgaaagaggtagaatcattttcgtgaattggtcaaaatgcgaggaccaaaagtgcaattaagcctat 17260769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 32305908 - 32305831
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaa 178  Q
    |||||||||||||||||||||| |||||||||||||||| || |||||||| || | |||||||| ||| || |||||    
T  32305908 atagtttagggacgattttgttcgatttaaaagaggtagaacaattttcgtgagctgatcaaaatgcgatgaccaaaa 32305831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 5161759 - 5161683
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    |||||||||||||| ||||||||| |||||| | ||||||| || |||||||||||||  |||| ||||||||||||    
T  5161759 agcataggtggttgaactaaaactgtcatttctatgcgtttttgaagttggaaataggaagataagactaaaactgc 5161683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 22651767 - 22651859
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||| ||||||||||||| ||||| ||| ||| || ||||||||||| || |  ||||||| ||||||  |||||||||||||||||||    
T  22651767 atagtttatggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagccta 22651859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 28595270 - 28595182
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||||||||||||| | ||| ||||| | | ||||||||| ||||| |  |||||||||||||| |||||||| |||||||    
T  28595270 atagtttagggacgattttgttcgttttgaaagaagcatgaccatttttgtaagctggtcaaaatacgaggaccaaaagtgcaattaag 28595182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 41834516 - 41834606
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||||| ||| ||||||| ||| | ||||||| |||||||||||||| || |  ||||||| |||||| |||||||||||||||||||    
T  41834516 atagtttagg-acggttttgttcgatctgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcct 41834606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 5162022 - 5162116
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||| | | || | ||||  ||||||| | ||||| |||| |||||||||||||    
T  5162022 catataatttagggacgattttgttcgatttaaaagaggtatgactaatctcatgagttggtcaaaatgcaaggataaaaaatgtaattaagcct 5162116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 14340478 - 14340401
Alignment:
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||||||| ||||||||| || ||||||||||||||| |||| ||||||||   |||| ||||| |||||||||    
T  14340478 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 16752741 - 16752580
Alignment:
Q  28 ctaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatt 127  Q
    |||||||| |||||| | ||||||| |||||||| ||||||| || |||||| ||||||||         ||||||||||| ||||||||||||| ||||    
T  16752741 ctaaaactatcatttctttgcgtttatggagttgaaaataggagg-tatgacaaaaactgcaaaaaa---catatagtttatggacgattttgttcgatt 16752646  T
Q  128 taaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    | ||||| | | || ||||||||| || |  ||||||| |  ||| ||||||||||||||||||||    
T  16752645 tgaaagaagcatgatcattttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaagccta 16752580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 13557072 - 13556995
Alignment:
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||||||||||||||||| ||||||| | |||||||||||| || |  ||||||| |||||||   |||||||||||||||    
T  13557072 gacgattttgtttgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggat---aagtgtaattaagcc 13556995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 28495294 - 28495380
Alignment:
Q  108 agggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    |||||| |||||||| ||||| ||||||| | |||||||||||| || |  |||||||| |  || |||||||||||||||||||||    
T  28495294 agggacaattttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatatggagaccaaaagtgtaattaagcctat 28495380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 10721875 - 10721779
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttta 198  Q
    |||||||||| ||||||||||| ||||| ||||||  | |||||||||||| || |  |||||||  ||||| ||||| ||||||||||| |||||||    
T  10721875 atagtttagg-acgattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaagcatatttta 10721779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 21370870 - 21370798
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgt--gcgtttctggagttggaaatagggggatatgactaaaa 84  Q
    |||||||||| | |||||||||  ||||||| |  |||||||||||||||||||||||| |||| ||||||||    
T  21370870 cataggtggtcggactaaaactgacatttttttttgcgtttctggagttggaaatagggagataggactaaaa 21370798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 20261011 - 20260923
Alignment:
Q  105 tttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||| |||||||||||||||| |||||||  ||||||||||| | || || |||||||  ||||| |||||||  |||||| ||||    
T  20261011 tttagggtcgattttgtttgatttgaaagaggcgggaccattttcatgagctagtcaaaatgtgaggaccaaaagtaaaattaaaccta 20260923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 27307513 - 27307605
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    ||||||||||| ||||| ||||||| ||||| ||||||| || ||||||||||| |  |  ||||||| || ||| ||||||| |||||||||    
T  27307513 catatagtttatggacggttttgttcgatttgaaagagggagaaccattttcgtgaactggtcaaaatgcggggaccaaaagtctaattaagc 27307605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 24331612 - 24331557
Alignment:
Q  138 aggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||| |||||| |||  ||||||| ||||||| ||||||||||||||||||||    
T  24331612 aggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagccta 24331557  T

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Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 14340554 - 14340480
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    |||| ||||||| ||||||||| |||||| |||  |||||| ||||||||||||| | |||| || |||||||||    
T  14340554 cataagtggttggactaaaactgtcatttctgtaggtttctagagttggaaatagagagataggattaaaactgc 14340480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 2865269 - 2865306
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  2865269 caaaacacgaggaccaaaagtgtaattaagcctatttt 2865306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 4623209 - 4623148
Alignment:
Q  130 aaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||| ||||||| |||||| ||| | |||||| |||| || ||||||||||||||||||    
T  4623209 aaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 189
Target Start/End: Complemental strand, 15371902 - 15371873
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||||||||||||||||||||||    
T  15371902 caaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 22651715 - 22651760
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctgga 57  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||    
T  22651715 agcataggtggttggactaaaactgtcatttatgtgcgtttatgga 22651760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 24362350 - 24362383
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||| ||||||||||||||||||||    
T  24362350 caaaatacgaggaccaaaagtgtaattaagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 27307220 - 27307060
Alignment:
Q  28 ctaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncat-atagtttagggacgattttgtttgat 126  Q
    |||||||| |||||| | |||||||||||||||| ||||||| || || ||||||||||||         ||| |||||||||| | |||||||||  ||    
T  27307220 ctaaaactgtcatttctatgcgtttctggagttgaaaataggagg-taagactaaaactgcaaaaaa---catgatagtttagg-atgattttgttcaat 27307126  T
Q  127 ttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    || |||||   | |||||||||| ||||||  ||||||| |||| | |||||||||||||||||||    
T  27307125 ttgaaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaagcct 27307060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 32697511 - 32697458
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaa 65  Q
    |||||||||||||| ||||||  | |||||| |||| |||||||||||||||||    
T  32697511 agcataggtggttggactaaatttgtcatttctgtgtgtttctggagttggaaa 32697458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 48247767 - 48247585
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnnc-atatagtttagg 110  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||           ||||| ||||||    
T  48247767 agcataggtggttggactaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaaaaatatatactttagg 48247668  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||| | |||| ||||||||||||||||||||    
T  48247667 gacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagccta 48247585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 9181779 - 9181959
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||          ||||||||||||||    
T  9181779 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaaaaacatatagtttaggg 9181878  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||| || || |||||| | ||  ||||||| | ||||||||||||||||||||||||    
T  9181879 acgattttgttcgatttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaagcct 9181959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 2758068 - 2758245
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| | ||||||||||||||| |||||||||||||||||||||| ||||         ||||||||||| ||    
T  2758068 agcataagtggttggactaaaactgtcatttatatgcgtttctggagttagaaatagggggatatgactaaacctgcaaaaaa---catatagtttatgg 2758164  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||| | |||||| |||||| |||||||||||||||||||    
T  2758165 acgattttgttcgatttaaaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaagcct 2758245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 7732664 - 7732486
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| |||||||| |||||||| |||| ||||||||||||         ||||||||||| ||    
T  7732664 agcataggtggttggactaaaactgtcatttatgtgcgtttatggagttgaaaatagggagataggactaaaactgcaaaaaa---catatagtttaagg 7732568  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||| |||||||| | |||| ||||| ||||||||||||||    
T  7732567 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaagccta 7732486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 27245380 - 27245203
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| || |||| ||||||||||||         ||||| |||| |||    
T  27245380 agcataggtggttggactaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaa--catatggtttgggg 27245283  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||| | |||| ||||||||||||||||||    
T  27245282 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 27245203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 50 - 195
Target Start/End: Complemental strand, 5334018 - 5333876
Alignment:
Q  50 tttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatttaaaagaggtaggaccattttc 149  Q
    |||||||||| ||||||||||||||||||||||||||||         ||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  5334018 tttctggagtaggaaatagggggatatgactaaaactgcaaaaaa---catatagtttagggacgattttgttcgatttaaaagaggtacgaccattttc 5333922  T
Q  150 gtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatt 195  Q
    || ||||  ||||||| | |||||||||||||||||||||||||||    
T  5333921 gtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcctatt 5333876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 26048319 - 26048492
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| ||||||||| |||||| ||||| ||| ||||||||||||||||| |||||||||||||||||         ||||||||||| ||||    
T  26048319 cataggtggttggactaaaactgtcatttatgtgcatttttggagttggaaatagggagatatgactaaaactgcaaaaa----catatagtttaaggac 26048414  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
     |||||||||||||||||||||||||||||| |||||| ||||  ||||||  | |||| ||||||||||||||||||    
T  26048415 aattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaagcc 26048492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 9181708 - 9181534
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||          |||||||||| ||    
T  9181708 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaa---atatagtttaagg 9181612  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| ||||||||||||||||    
T  9181611 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 9181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 16081671 - 16081846
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||| ||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||||||||     
T  16081671 cataagtggttggactaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttagggat 16081767  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||| |||||||||||||||||| || |||||| ||||  ||||||| | |||| |||| ||||||||||||||    
T  16081768 gattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaagcct 16081846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 787152 - 787340
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnn-catatagtttagg 110  Q
    |||||| ||||||| ||||||||| |||||| |||||||||||||||||| ||||| |  |||| |||||||||| |          || ||||||||||    
T  787152 agcatatgtggttggactaaaactatcatttatgtgcgtttctggagttgaaaatatgaagataagactaaaactacaaattaaaaacaaatagtttagg 787251  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttat 199  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||  |||||||||||| | ||||||||||||||| ||||| ||||    
T  787252 gacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaaacctatcttat 787340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 25637374 - 25637195
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||||||||||   ||||||| |||||| ||||||||||||||||||||||||||| |||| |||||||||| |         ||||||||||||||    
T  25637374 agcataggtggttggcttaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaa--catatagtttaggg 25637277  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||||||||| |||| | ||||  |||| || | |||| ||||||||||||||||||||    
T  25637276 acgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaagccta 25637195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 48247961 - 48248140
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||  ||||||||||||         ||||||||||| ||    
T  48247961 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgc--aaaaaaacatatagtttaagg 48248058  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||| || |||||||||||| || ||||  |||||||   |||| ||||||||||||||||||||    
T  48248059 acgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 48248140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 25637568 - 25637741
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  25637568 agcataggtggttggactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaagg 25637664  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| |||||||||||||||    
T  25637665 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 26026494 - 26026320
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| |||||||||||||||||| |||||||| |||| ||||||||||||         ||||||||||| ||    
T  26026494 agcatatgtggttgaactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataagactaaaactgcaaaaaaa--catatagtttatgg 26026397  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||||||||| ||||| |||||| || |  ||||||||| |||| |||||||||||||||    
T  26026396 acgattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 24929673 - 24929854
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatat--agtttag 109  Q
    ||||||||| |||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||          ||||  |||||||    
T  24929673 agcataggtcgttggactaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaaaatatatatagtttag 24929772  T
Q  110 ggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||  ||||||| | |||| ||||| ||||||||||||    
T  24929773 ggacgattttgtttgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcc 24929854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 35161171 - 35161342
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||| |  | |||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||         ||||||||||||||    
T  35161171 agcataggtggtcggcccaaaactatcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaa--catatagtttaggg 35161268  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaat 185  Q
    ||||||||||| ||||||||||||||||||||| || ||| ||||  ||||||| | |||| ||||||||||||    
T  35161269 acgattttgttcgatttaaaagaggtaggaccaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 39388636 - 39388819
Alignment:
Q  12 agcataggtggttgcactaaaactctcattttt-gtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagg 110  Q
    |||||| ||||||| ||||||||| |||||||| |||||||| |||||||| |||||||| |||| ||||||||||||         ||||||||||||     
T  39388636 agcatatgtggttggactaaaactgtcattttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaaaa--catatagtttaga 39388733  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattt 196  Q
    |||||||||||| ||||||||||||||||||| | |||||| ||||  ||||||| | |||| ||||||||||||||||| |||||    
T  39388734 gacgattttgttcgatttaaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcatattt 39388819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 786957 - 786781
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| ||||||||| ||| || ||||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||||| |||     
T  786957 cataggtggttgaactaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaa--catatagtttaaggaa 786860  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
     |||||||| ||||||||| ||||| |||||||||||| ||||  |||||||   ||||||||||||||||||||||||    
T  786859 aattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaagcct 786781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 27245574 - 27245724
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||| |||         |||||| |||| ||    
T  27245574 agcataggtggttggactaaaactatgatttctgtgcgtttctggagttggaaatagggagatatgactaaaattgc---aaaatacatataatttaagg 27245670  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaat 165  Q
    ||||||||||| ||||||||| || ||||||||||||||| |||| ||||||||    
T  27245671 acgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaat 27245724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 34595142 - 34595319
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncat-atagtttagg 110  Q
    ||||| |||||||| ||||||||| |||||| |||||||||||||||||| ||||| |||| ||  |||||||||||         ||| ||||||||||    
T  34595142 agcatgggtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaataagggggtagcactaaaactgcaaaaa----catgatagtttagg 34595237  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||||||| ||||||||||| | |||||||||||||| ||||  |||||||  ||||| |||||||||||||||||||    
T  34595238 gacgattttgttcgatttaaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcct 34595319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 28687869 - 28688041
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||  |||| |||||||| |||         ||||||||||||||    
T  28687869 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaagtgc---aaaaaacatatagtttaggg 28687965  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||||||||| || || |||||| ||||  ||||||| | |||| ||||| |||||||||    
T  28687966 acgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaa-tgtaattaa 28688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 15712541 - 15712366
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| ||||||||||| ||||||||||||||| |||| |||||||||| |          |||||||||| ||    
T  15712541 agcatatgtggttggactaaaactgtcatttatgtgcgtttctagagttggaaatagggagataggactaaaactacaaaaaat---atatagtttaagg 15712445  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| |||||||||||||||||    
T  15712444 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 15712366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 5746008 - 5746187
Alignment:
Q  11 aagcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagg 110  Q
    ||||||||||| ||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| |||||||| |||         ||||||||||| |    
T  5746008 aagcataggtgattggactaaaactgtcatttatgtgcgtttatggagttggaaatagggagataagactaaaattgc-aaaaaaaacatatagtttatg 5746106  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||| ||||||| ||||||||||||| | || || |||||| ||||| ||||||| | |||| |||||||||||||||||||    
T  5746107 gacggttttgttcgatttaaaagaggca-gatcaatttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaagcct 5746187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 5745815 - 5745642
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||| |||| ||||||||||||         ||||||||||| |     
T  5745815 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagtaggaaatagggagataagactaaaactgc---aaaaaacatatagtttaaga 5745719  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    | ||||||||| ||||||||| || || |||||||||||| ||||  |||||||   |||| |||||||||||||||    
T  5745718 aagattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 5745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 11973772 - 11973945
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||| |||||||||||||  ||||  |||||||||||         ||| || |||||||    
T  11973772 agcataggtggttggactaaaactgtcatttctgtgcgtttctgaagttggaaataggaagatagaactaaaactgc---aaaaaccatttaatttaggg 11973868  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||||||  ||||||||||||||| |||| ||||||| |||  ||||||| | |||| ||||| |||||||||    
T  11973869 acgattttgttcaatttaaaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaattaa 11973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 16081475 - 16081298
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| |||| |||| ||||||||||||||||  |||| ||||||||||||         || |||||||| ||    
T  16081475 agcatatgtggttggactaaaactgtcatttctgtgtgtttttggagttggaaataggtagataggactaaaactgcaaaaaa---caaatagtttaagg 16081379  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||| || ||||||||||| | | ||||  ||||||||  |||| |||||||||||||||||||    
T  16081378 acgattttgttcgatttaaaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaagcct 16081298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 5334273 - 5334363
Alignment:
Q  99 atatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||  |||||||  ||||| ||||||||||||||||    
T  5334273 atatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 5334363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 11971514 - 11971333
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactg-cnnnnnnnnncatatagtttagg 110  Q
    |||||||||||||| ||||||||| |||||| |||| |||||| || |||||||||||| |||| |||||||||||           ||||||||||| |    
T  11971514 agcataggtggttggactaaaactgtcatttatgtgtgtttctagaattggaaatagggagataggactaaaactgtaaaaaaaaaacatatagtttaag 11971415  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||||||| ||||||||| || ||||||||||||||| |||   |||||||   |||| ||||||| |||||||||||    
T  11971414 gacgattttgttcgatttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaagcct 11971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 26026688 - 26026866
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| | ||||||| ||||||||||||||||| ||||  |||||||||||         ||||||||||| ||    
T  26026688 agcataggtggttggactaaaactgtcatttctatgcgtttttggagttggaaatagggagataaaactaaaactgc---aaaaaacatatagtttaagg 26026784  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    | | ||||||| |||||| || || ||||||||||||||| | ||  ||||||||  |||| ||||||||||||||| ||||    
T  26026785 atggttttgttcgatttataaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaattaaaccta 26026866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 39136991 - 39137080
Alignment:
Q  103 agtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||| ||||||||||||| ||||||||||||| |||||||||||||| ||    ||||||||||||||||||||||||||||||||||    
T  39136991 agtttatggacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagcct 39137080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 14311659 - 14311790
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| ||||||| | |||||| ||||||||||| ||||||||||||||| |||| ||||||||||||         |||||||||||  |||    
T  14311659 cataggtggttggactaaaattgtcatttctgtgcgtttctagagttggaaatagggagataagactaaaactgc---aaaaaacatatagtttaaagac 14311755  T
Q  114 gattttgtttgatttaaaagaggtaggaccatttt 148  Q
    ||||||||| ||||||||| || ||||||||||||    
T  14311756 gattttgttcgatttaaaaaagataggaccatttt 14311790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 7732857 - 7733039
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| |||| || | | |||| ||||| ||| |||||||| |||||||| |||| |||||||| |||         ||||||||||| ||    
T  7732857 agcataggtggttggactagaattgttatttctgtgcatttatggagttgaaaatagggagataggactaaaattgcaaaaaa---catatagtttaagg 7732953  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||| ||||||||| || ||||| ||||||||| ||||  |||||||   |||| ||||||||||||||||||| ||||    
T  7732954 acgattttgttcgatttaaaaaagataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctttttt 7733039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 34594758 - 34594585
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncat-atagtttagg 110  Q
    |||||||||||||| ||||||||| |||||| |||  |||||| |||||| |||||||||| || ||||||||||||         ||| ||||||||||    
T  34594758 agcataggtggttggactaaaactatcatttatgtttgtttctcgagttgaaaataggggg-taggactaaaactgcaaaaa----catgatagtttagg 34594664  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    || |||||||||||||| |||||| |   ||  |||||||| ||||| ||||||| |||||| ||||||||||||||||    
T  34594663 gatgattttgtttgattgaaaagatgcgagataattttcgtgagttagtcaaaatgcgaggaccaaaagtgtaattaag 34594585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 39136776 - 39136684
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||||||||||||| ||||| ||||||  || ||||||||||| || |  ||||||| | |||||||||||||||||||||||||    
T  39136776 atagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaagccta 39136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 14311492 - 14311368
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||| |||| ||||||||||||||||| |||| || ||||||||          ||||||||||||||    
T  14311492 agcataggtggttggactaaaactgtcatttatgtgtgtttatggagttggaaatagggagataggattaaaactg--taaaaaaacatatagtttaggg 14311395  T
Q  112 acgattttgtttgatttaaaagaggta 138  Q
    |||||||| ||  ||||||||||||||    
T  14311394 acgattttattcaatttaaaagaggta 14311368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 26048124 - 26048066
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaataggg 70  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  26048124 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggg 26048066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 28687750 - 28687593
Alignment:
Q  31 aaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatttaa 130  Q
    ||||| |||||| ||||||||||||||||||||||||||  |||| ||||| ||||||          |||||||||| ||||||||||||| ||||||     
T  28687750 aaactgtcatttatgtgcgtttctggagttggaaataggaagataggactagaactgcaaaaaaa---atatagtttaaggacgattttgttcgatttat 28687654  T
Q  131 aagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    || || ||| ||||||||||| ||||  |||||||   | || ||||||||||||||||||    
T  28687653 aaaagatagaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaagcc 28687593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 16917806 - 16917711
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||| ||||||||| ||||||||| || || |||||||||||| ||||  |||||||   |||| ||||||||||||||||||||    
T  16917806 catatagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 16917711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 35579342 - 35579430
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    |||||||||| ||| ||||||||||||| ||||||| |  | ||||||||| || | |||||||| ||||||||||||||||||||||||    
T  35579342 atagtttagg-acggttttgtttgatttgaaagaggcataatcattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaagc 35579430  T

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Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 9393825 - 9393738
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||| ||| ||||||| ||||| ||||||| | ||| |||||||| || | |||||||| |||||||||||||||||||||||    
T  9393825 atagtttagg-acggttttgttcgatttgaaagaggcaagacaattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaag 9393738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 9394184 - 9394274
Alignment:
Q  99 atatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    |||||||||||||||| ||||||| ||||| ||| ||||||||||||||| || || |  ||||||| ||| || |||||||||||||||||    
T  9394184 atatagtttagggacggttttgttcgatttgaaaaaggtaggaccatttttgtgagctggtcaaaatgcga-gaccaaaagtgtaattaagc 9394274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 49064124 - 49064033
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||| ||| |||||||||  |||| ||||||| |  ||||||||||| || |  |||||||||||||| |||||||||||||||||||    
T  49064124 atagtttatggaagattttgttctatttgaaagaggcaataccattttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaagcct 49064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 4477792 - 4477702
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||||||||||| ||  ||||||||||||  ||||||||||||| | ||  |||||||   |||||||| ||||||||||||||    
T  4477792 atagtttagggacgattttattcaatttaaaagaggcgggaccattttcgtgaattggtcaaaatgtaaggatcaatagtgtaattaagcc 4477702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 33880970 - 33881030
Alignment:
Q  27 actaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    ||||||||| |||||| |||||||||||||||||| ||||| ||||||| ||||||||||||    
T  33880970 actaaaactgtcatttatgtgcgtttctggagttgaaaata-ggggataagactaaaactgc 33881030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 35160976 - 35160906
Alignment:
Q  13 gcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaa 84  Q
    ||||||||||||| ||||||||| |||||| ||||||  |||||||||| |||||||| |||| ||||||||    
T  35160976 gcataggtggttggactaaaactatcatttctgtgcg-ctctggagttgaaaatagggagataggactaaaa 35160906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 182
Target Start/End: Original strand, 18535338 - 18535419
Alignment:
Q  100 tatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgt 182  Q
    ||||||||||||||| ||||||| ||||| ||||||||| |||||||||| | ||    |||||||||||||| |||||||||    
T  18535338 tatagtttagggacggttttgttcgatttgaaagaggta-gaccattttcttgagcatgtcaaaatacgaggaccaaaagtgt 18535419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 45815431 - 45815343
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||||||||| ||||||| ||||| ||||||| | ||||||||||   || |  ||||||| | |||| |||||||||||||||||||    
T  45815431 atagtttagggacggttttgttcgatttgaaagaggcatgaccattttc---agctggtcaaaatgcaaggaccaaaagtgtaattaagcct 45815343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 35289415 - 35289451
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctattt 196  Q
    ||||| |||||||||||||||||||||||||||||||    
T  35289415 caaaacacgaggatcaaaagtgtaattaagcctattt 35289451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 26048050 - 26047951
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||| |||| ||||| || ||||||||| || || |||||||||||| ||||  || ||||   || |||||||||||||||||  |||||||    
T  26048050 catatagtttaaggacaattttattcgatttaaaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaattaattctatttt 26047951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 28583470 - 28583430
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctattttata 200  Q
    ||||| ||||||| |||||||||||||||||||||| ||||    
T  28583470 caaaacacgaggaccaaaagtgtaattaagcctattatata 28583430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 33880706 - 33880622
Alignment:
Q  105 tttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||| ||||||| ||||| ||||||| || || ||||| || || |  |||||||||||||| ||||| || |||||||    
T  33880706 tttagggacggttttgttcgatttgaaagaggcagaacaatttttgtgagctggtcaaaatacgaggaccaaaaatgcaattaag 33880622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 46443 - 46260
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||||||||| ||| |||| |||||||||||| |||||||||||||||||         ||||||||||||||    
T  46443 agcataggtggttggactaaaactgtcatttttgtgcatttatggaattggaaatagggagatatgactaaaactgcaaaaaaa--catatagtttaggg 46346  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    | ||||||||| |||||||||||||||| ||||||||||||||||  ||||||| |||||| |||||||| |||||||||| ||||    
T  46345 atgattttgttcgatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaagcctttttt 46260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 46637 - 46816
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| || |||| | |||||| ||||||||| ||||||||||||||||| ||||  ||||||||| |         |||||||||||  |    
T  46637 agcataggtggttggaccaaaattgtcatttatgtgcgtttttggagttggaaatagggtgatagaactaaaactacaaaaaaa--catatagtttaaag 46734  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||| |  ||||||||||||||| ||||  |||||||   |||| ||||||||||||||||||||    
T  46735 acgattttgttcgatttaaaatatataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 46816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 46737025 - 46737203
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||| |||||  |||||||||||||||||         ||||||||||||||    
T  46737025 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggagataggaagatatgactaaaactgcaaaaaa---catatagtttaggg 46737121  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||| | |||| ||||||||||||||||||||    
T  46737122 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 46737203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 34807293 - 34807114
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| || |||| ||||||||||||         |||||| |||||||    
T  34807293 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaa--catatactttaggg 34807196  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||| ||||| |||||| |||| |||||||| | |||| ||||||||||||||||||||    
T  34807195 acgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagccta 34807114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 34789752 - 34789927
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||||||||    
T  34789752 agcataggtggttggactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaa--catatagtttaggg 34789849  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    || |||||||| ||||||||||||||||||||| |||||| ||||  ||||||| | |||| ||||||||||||||||    
T  34789850 acaattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 34789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 33690001 - 33689827
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| ||||| ||| |||||| |||||||||||||||||| |||||||| |||||||||||||||||         ||||||||||| |||||    
T  33690001 ataggtggttggactaacactgtcatttatgtgcgtttctggagttgtaaatagggagatatgactaaaactgcaaaaa----catatagtttaaggacg 33689906  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||| ||||||||||||||||||||| ||| || ||||  ||||||| | |||| ||||||||||||||||||||    
T  33689905 attttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 33689827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 28465257 - 28465083
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||||         ||||||||||| ||    
T  28465257 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgc---aaaaaacatatagtttaagg 28465161  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||| |||||||||||||||||| || |||||||||||  |||||||   ||||  |||||||||||||||    
T  28465160 acgattttgttcgatttaaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaag 28465083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 55677327 - 55677505
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||| ||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| |||||||| ||          |||||||||||| |    
T  55677327 agcataggtgattggactaaaactgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaattg--taaaaaaacatatagtttagag 55677424  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||||| |||| |||||||||||||||||||    
T  55677425 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagcct 55677505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 14440004 - 14439831
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||||||    
T  14440004 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaggg 14439908  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||||||| |||||||| ||||| ||||| |||||| ||||  ||||||| | |||| ||||| |||||||||    
T  14439907 acgattttgtttaatttaaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 14440198 - 14440374
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||         ||||||||||| ||    
T  14440198 agcataggtggttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgc---aaaaaacatatagtttaagg 14440294  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    | ||||||||| ||||||||| || ||||||||||||||||||||  |||||||   |||| ||||||| ||||||||||    
T  14440295 atgattttgttcgatttaaaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaagcc 14440374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 197
Target Start/End: Complemental strand, 19529031 - 19528863
Alignment:
Q  27 actaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgat 126  Q
    ||||||||| |||||| |||||||||| |||||||||||||||| |||| ||||||||||||         |||||||||||||||||||||| || |||    
T  19529031 actaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaa--catatagtttagggacgattttattcgat 19528934  T
Q  127 ttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    |||||||||||||||||| |||||| | ||  ||||||| | |||| ||||||||||||||||||||||||    
T  19528933 ttaaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaagcctatttt 19528863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 21034408 - 21034229
Alignment:
Q  16 taggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacga 115  Q
    |||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||||          ||||||||||| ||||||    
T  21034408 taggtggttggactaaaactgtcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactg--taaaaaaacatatagtttaaggacga 21034311  T
Q  116 ttttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| |||||||||||||||||| |||||    
T  21034310 ttttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaatttt 21034229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 21034606 - 21034784
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||| ||||  |||||||||||          |||||||| ||||    
T  21034606 agcataggtggttggactaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaaaaa--atatagttcaggg 21034703  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| |||||||||||| |||||||| |||||| ||||  ||||||| | |||| ||||| |||||||||||||    
T  21034704 acgattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagcct 21034784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 24851835 - 24852010
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||   |||| ||||||||||||         ||||||||||||||    
T  24851835 agcataggtggttgtactaaaactttcatttctgtgcgtttctggagttggaaatagaaagataggactaaaactgcaaaaaaa--catatagtttaggg 24851932  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||| |||||||||||||||||| || |||||| ||||  ||||||| | |||| ||||||| ||||||||    
T  24851933 acgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaag 24852010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 45838723 - 45838545
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| || |||||| |||||| ||||||||| || ||| |||||||||| |||| ||||||||||||         ||||||||||||||    
T  45838723 agcataggtggttggacaaaaactatcatttctgtgcgtttttgaagtaggaaatagggagataggactaaaactgcaaaaaa---catatagtttaggg 45838627  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||||||||| || ||| ||||  ||||||||| |||| ||||||||||| ||||||||    
T  45838626 acgattttgttcgatttaaaagaggtaggaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaaataagccta 45838545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 34789558 - 34789382
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||| ||||||||||||||||| ||||||||| |||| ||||||||||||         ||||||||||| ||    
T  34789558 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaa---catatagtttaagg 34789462  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| ||||||||||||||||||    
T  34789461 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcc 34789382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 45838917 - 45839101
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||  |||| ||||||||||||         ||||||||||| ||    
T  45838917 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactgcaaaaaaaaacatatagtttaagg 45839016  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||| ||||||||| || |||||||| |||||| ||||  ||||||||  |||| ||||||||||||||| ||| ||||    
T  45839017 acgattttgttcgatttaaaaaagataggacca-tttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaaacctttttt 45839101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 54440745 - 54440573
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||| |||||| ||||| |||||||| |||| ||||||||||||          | |||||||||||    
T  54440745 agcataggtggttggactaaaactgtcatttctgtgcatttctgaagttgaaaatagggagataggactaaaactgcaaaaa-----acatagtttaggg 54440651  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||| | |||| ||||||||||||||||    
T  54440650 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 56077695 - 56077870
Alignment:
Q  13 gcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggga 112  Q
    ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||| ||||||||||||         ||||||||||| |||    
T  56077695 gcataggtggttggactaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaagga 56077791  T
Q  113 cgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||||||||| ||||||||| || || |||||||||||| ||||  |||||||   |||| ||||| ||||||||||||    
T  56077792 cgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagcc 56077870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 54440939 - 54441113
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||   |||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  54440939 agcataggtggttggactaaaactgtcattgacgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaagg 54441035  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||| ||||||||| || ||||||||||||||| || | ||||||||   |||| ||||||||||||||||    
T  54441036 acgattttgttcgatttaaaaaagataggaccattttcgtgagctgatcaaaatggtaggaccaaaagtgtaattaag 54441113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 26974460 - 26974275
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| |||||||||||          ||||||||||| ||    
T  26974460 agcatagttggttgaactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactg--taaaaaaacatatagtttaagg 26974363  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttat 199  Q
    ||||||||||| ||||||||| || || |||||||||||| ||||  | |||||   |||| ||||||||||||||||||| ||||||    
T  26974362 acgattttgttcgatttaaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaagccttttttat 26974275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 12593393 - 12593571
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||  |||||||||||||||||| |||||||| |||| ||||||||||||          ||||||||||  |    
T  12593393 agcatatgtggttggactaaaactgtcattcctgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaat---atatagtttacag 12593489  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||| ||||| |||||| ||||  ||||||| | |||| ||||||||||||||||||||    
T  12593490 acgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 12593571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 41608551 - 41608377
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||| || |||| ||||||||||||         ||||||||||  ||    
T  41608551 agcataggtggttggactaaaactgtcatttctgtgcgtttttgaagttggaaatatggagataggactaaaactgcaaaaaaaaacatatagttt--gg 41608454  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||||||||| ||||| |||| | |||| |||||||| | |||| |||||||||||||||    
T  41608453 acgattttgttcgatttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaa 41608377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 28465451 - 28465641
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| |||||||||   |||| ||||||||| ||||||||||||||||| |||| |||||||| |||         ||||||||||| ||    
T  28465451 agcataggtggttggactaaaactgctatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaa---catatagtttaagg 28465547  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttataatata 205  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| |||||||||||||||||| | ||| |||||||    
T  28465548 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaaatttttaatata 28465641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 36168506 - 36168332
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| |||| |||| |||||| | ||||||||||||||| ||||||||| |||| ||||||||||||         |||||| |||| ||||    
T  36168506 cataggtggttggactataactgtcatttatatgcgtttctggagttagaaatagggagataagactaaaactgcaaaaaaaaacatataatttaaggac 36168407  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||| ||||||||||||||| ||||| ||||||  |||  ||||||| | |||| |||||||||||||||    
T  36168406 gattttgttcgatttaaaagaggtaagaccaatttcgtgggttggtcaaaatgcaaggagcaaaagtgtaattaa 36168332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 41114335 - 41114160
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||| ||||||||||| ||||||||||||||| |||||||||||||||||         ||||||||||| ||    
T  41114335 agcataggtggttggactaaaattgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgc-aaaaaaaacatatagtttaagg 41114237  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||| ||||||| ||||||||| || ||||||| ||||||| ||||  |||||||   |||| ||||||||| |||||    
T  41114236 acgtttttgttcgatttaaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaa 41114160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 12593198 - 12593023
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    ||||||| |||| ||||||||| |||||| |||||||||||||||||| |||||||| |||| || ||||| |||         ||||||||||| ||||    
T  12593198 cataggttgttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaaattgcaaaaaa---catatagtttaaggac 12593102  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||| ||||||||| ||||| |||||||||||| ||||  ||||| |   |||| |||||||||||||||||||    
T  12593101 gattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaagcct 12593023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 24851639 - 24851565
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  24851639 cataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataagactaaaactgc 24851565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 28166180 - 28165990
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| | ||||||| |||||| ||||||||| || ||||| |||||||| |||| ||||||||||||          |||||||||| ||    
T  28166180 agcataggtggttgaattaaaactatcatttctgtgcgtttttgtagttgaaaatagggagataggactaaaactgcaaaaaaa---atatagtttaagg 28166084  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttataatata 205  Q
    || |||||||| ||||||||| || ||||||||||||||| ||||  ||||||||  |||| ||||| | ||||||| ||||||  ||||||||    
T  28166083 acaattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaaacctattaaataatata 28165990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 6616849 - 6616675
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| | | || |||||| || ||         ||||||||||| ||    
T  6616849 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagagaggtaggactaacacagc--aaaaaaacatatagtttaagg 6616752  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||| |  || |||||||||||| |||| ||||||||   || | |||||||||||||||    
T  6616751 acgattttgttcgatttaaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaa 6616675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 35193467 - 35193322
Alignment:
Q  28 ctaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatt 127  Q
    |||||||| |||||| | |||||||||| ||||| ||||||| | ||| ||||||||||||         ||||||||||||||||||||||||| ||||    
T  35193467 ctaaaactgtcatttctctgcgtttctgaagttgaaaataggag-ataggactaaaactgcaaaaaa---catatagtttagggacgattttgttcgatt 35193372  T
Q  128 taaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaa 177  Q
    | |||||||||||||||||||||| || | |||||||| |||||| ||||    
T  35193371 tgaaagaggtaggaccattttcgtgagctgatcaaaatgcgaggaccaaa 35193322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 201
Target Start/End: Original strand, 6617070 - 6617217
Alignment:
Q  50 tttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatttaaaagaggtaggaccattttc 149  Q
    |||||||||||||| |||||| |||| ||||||||||||          ||||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  6617070 tttctggagttggagatagggagataggactaaaactgcaaaaaaa---atatagtttagggacgattttattcgatttaaaagaggtaggaccaatttc 6617166  T
Q  150 gtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttataa 201  Q
    || ||||| ||||||| | || | ||||| ||||||||| || |||||||||    
T  6617167 gtgagttagtcaaaatgcaagtagcaaaaatgtaattaaacc-attttataa 6617217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 229337 - 229158
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncat-atagtttagg 110  Q
    |||||||||||||| ||||||||| ||| |||||||||||| |||||||| ||||| |||  ||  |||||||||||         ||| |||||||| |    
T  229337 agcataggtggttggactaaaactgtcacttttgtgcgtttatggagttgaaaataagggagtagaactaaaactgcaaaaa----catgatagtttaag 229242  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||||||||||  |||| ||||||| | |||||||||||  || |  |||||||||||||| ||||||||||||||| |||||    
T  229241 gacgattttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaaacctat 229158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 26974698 - 26974788
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| |||||| | ||| ||||||| | |||| ||||| |||||||||    
T  26974698 catatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattcaaaatgcaaggaccaaaaatgtaattaa 26974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 34807509 - 34807660
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| | ||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  34807509 agcatatgtggttggactaaaactgtcatttctatgcgtttatggagttggaaatagggagataggactaaaactgc---caaaaacatatagtttaagg 34807605  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaata 166  Q
    ||||||||||| || |||||| || ||| |  |||||||| |||| |||||||||    
T  34807606 acgattttgttcgaattaaaaaagatagaataattttcgtgagttgatcaaaata 34807660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 46736829 - 46736654
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||| ||||||| ||||||||| |||||| |||||||||||||||||| |||||||| |||| || |||| ||||         ||||||||||| ||||    
T  46736829 cataagtggttgaactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaatctgc---aaaaaacatatagtttaaggac 46736733  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
     |||||||| ||||||||| |  || |||||||||||| ||||  ||||||||  || | ||||||| |||||||||||    
T  46736732 aattttgttcgatttaaaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaagcct 46736654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 229529 - 229702
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncat-atagtttagg 110  Q
    |||||||||||||| ||||||| | ||| || |||||||||||||||||| ||||| || | || || |||||||||         ||| |||||||| |    
T  229529 agcataggtggttgtactaaaattgtcacttctgtgcgtttctggagttgaaaataaggaggtaggattaaaactgcaaaaa----catgatagtttaag 229624  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||||||||||||| ||||||| | |||||||||||| || |  ||||||| ||| || |||||||||||||||    
T  229625 gacgattttgtttgatttgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 41608870 - 41608963
Alignment:
Q  100 tatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||| |||||| ||||  |||||||   |||| ||||||||||||||||||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 41608963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 35643743 - 35643667
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    |||||||||||||| ||||||||| |||||| ||||||||| |||||||| |||||||| |||| ||||||||||||    
T  35643743 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttgtaaatagggagataggactaaaactgc 35643667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 24851407 - 24851312
Alignment:
Q  100 tatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatt 195  Q
    ||||||||| |||||||||||||  |||||||| || ||| ||||||||||| ||||  |||||||   |||||||||||||||||||||||||||    
T  24851407 tatagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcctatt 24851312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 16214865 - 16215038
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||| ||||||||||||| |||||||  ||||  | |||||||||          |||||||||| ||    
T  16214865 agcataggtggttggactaaaactatcatttatgtgtgtttctggagttgaaaataggaagatagaattaaaactgcaaaaaat---atatagtttaagg 16214961  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||| ||  |||||||| || || || |||||||||||||| ||||||||   |||| ||||||| |||||||    
T  16214962 acgattttattcaatttaaaaaagatatgatcattttcgtaagttgatcaaaatgataggaccaaaagtataattaa 16215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 19529063 - 19529242
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||| |||||| ||||||||| |||||| ||||||||| |  ||||||||||| || ||||  |||||||||||         |||||||||||  |    
T  19529063 agcatagatggttggactaaaactgtcatttctgtgcgttttttaagttggaaatatggagatagaactaaaactgcaaaaaaa--catatagtttaaag 19529160  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||  ||||||||||| ||| | ||||||  ||||||  |||||||   |||| ||||||||||||||||||||    
T  19529161 acgattttgttcaatttaaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaagccta 19529242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 24336223 - 24336307
Alignment:
Q  105 tttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||| ||| ||||||| ||||| ||||||| |||||||||||||| || |  ||||||| |||||||||||||||||||||||    
T  24336223 tttaggaacggttttgttcgatttgaaagaggcaggaccattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaag 24336307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 35193759 - 35193850
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||| ||| ||||||| ||||| ||||||| |||||||||||||| || | |||||||| | |||| ||||||||||||||||||||    
T  35193759 atagtttagg-acggttttgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaagccta 35193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 33778065 - 33778132
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaat 165  Q
    |||||| |||||| |||||||||||||||||||||||||||| | ||||||||| ||||| |||||||    
T  33778065 catataatttaggaacgattttgtttgatttaaaagaggtagaatcattttcgtgagttagtcaaaat 33778132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 40160187 - 40160093
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||||||||| ||||||| ||||||||||||| | ||| |||||||| || |  | ||||| || ||||||||| |||||||||||||    
T  40160187 catatagtttagggacggttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatgcggggatcaaaaatgtaattaagcct 40160093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 30597973 - 30598065
Alignment:
Q  99 atatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||| |||||||||||||||||| ||||||||||||  || |||| || ||| ||||  |||||| ||||||| |||||||||||| |||||    
T  30597973 atataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggaccaaaagtgtaatcaagcc 30598065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 18965513 - 18965580
Alignment:
Q  19 gtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaact 86  Q
    ||||||| ||||||||| |||||| ||||||||| |||||||| |||||||||  |||||||||||||    
T  18965513 gtggttggactaaaactgtcatttatgtgcgtttatggagttgaaaataggggagtatgactaaaact 18965580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 10795769 - 10795854
Alignment:
Q  103 agtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||| |||||||||||| ||||| ||||||  ||||||| |||||| || |  ||||||| || |||||||||||||||||||    
T  10795769 agtttagagacgattttgttcgatttgaaagagagaggaccaatttcgtgagctgttcaaaatgcggggatcaaaagtgtaattaa 10795854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 17504412 - 17504465
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgt 151  Q
    ||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||    
T  17504412 catatagtttaaggacggttttgttcgatttaaaagagataggaccattttcgt 17504465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 18965230 - 18965141
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    |||||||| ||||||||||||| ||||| ||||||| | |||| ||||||| ||| | | |||||  ||||||||||| |||||||||||    
T  18965230 atagtttaaggacgattttgttcgatttgaaagaggcaagaccgttttcgtgagtaagttaaaatgtgaggatcaaaaatgtaattaagc 18965141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 36168701 - 36168774
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaac 85  Q
    |||||||||||||| ||||||||| | |||| ||||| ||| |||||||| |||||||| |||| |||||||||    
T  36168701 agcataggtggttggactaaaactgtgatttatgtgcatttatggagttgaaaatagggagataggactaaaac 36168774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 1397683 - 1397592
Alignment:
Q  103 agtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    |||||| ||||||||||||| ||||||||| || ||||||||||||  | ||||  |||||||    |||||||||||||||||||| ||||    
T  1397683 agtttaaggacgattttgttcgatttaaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaattaagtctat 1397592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 51309961 - 51310052
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||||||||  ||||||| ||||| ||||||| | |||||||||||| || |  | ||||| |||||| |||||||| ||||||||||    
T  51309961 atagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaagtgcaattaagcct 51310052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 24335836 - 24335759
Alignment:
Q  116 ttttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||| ||||| ||||||| | |||||||||||| || |  ||||||| | |||||| ||||||||||||||||||    
T  24335836 ttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggatcgaaagtgtaattaagccta 24335759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 51021309 - 51021346
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  51021309 caaaacacgaggatcaaaagtgtaattaagcctatttt 51021346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 33777725 - 33777630
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||| ||||| ||| |  || || ||||||||| ||||  |||||||   |||| ||||||||||||||| ||||    
T  33777725 catatagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcgtgagttggtcaaaatggtaggaacaaaagtgtaattaaaccta 33777630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 51309753 - 51309667
Alignment:
Q  105 tttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||||||||  ||||||| ||||| ||||| | | || ||||||||| || |||| |||||||||||| |||||||  |||||||||    
T  51309753 tttagggacagttttgttcgatttgaaagacgcatgatcattttcgtgagctaataaaaatacgaggaccaaaagtacaattaagcc 51309667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 16691012 - 16690939
Alignment:
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||||  ||| ||||||| |||||||||||||| |||  ||||||| || |||| ||||| |||||||||    
T  16691012 attttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 16691555 - 16691616
Alignment:
Q  130 aaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||| |||||||||||||| |||   |||||| ||  ||||||||||||||||||||||    
T  16691555 aaagaggcaggaccattttcgtgagtaggtcaaaacacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 23986610 - 23986521
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    |||||||||||||  ||||||| ||||| ||||||  | |||||||||||| || |  |||||||  ||||| |||||||| ||||||||    
T  23986610 atagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgaaattaagc 23986521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 35643968 - 35644004
Alignment:
Q  52 tctggagttggaaatagggggatatgactaaaactgc 88  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  35643968 tctggagttggaaatagggagataagactaaaactgc 35644004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 35644042 - 35644106
Alignment:
Q  125 atttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||||| ||||  |||||| ||||  ||||||| | |||| ||||||||||||||||    
T  35644042 atttaaaagaggtatgacctatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 35644106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 44219441 - 44219377
Alignment:
Q  125 atttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||| ||  ||||||| |||||| ||||  | |||||||||||| ||||||||||||||||    
T  44219441 atttaaaaaagagaggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaag 44219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 6e-46; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 2868080 - 2868254
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||| ||||||| ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||         |||||||| |||||||    
T  2868080 catatgtggttggactaaaactgtcacttatgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaa---catatagtgtagggac 2868176  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||| ||||||||||||||||||||||||||||  |||  |||||||  ||||||||||||||||||||||||    
T  2868177 gattttgttcgatttaaaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaagcc 2868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 1837681 - 1837500
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||||         ||||||||||||||    
T  1837681 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgc---aaaaaacatatagtttaggg 1837585  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattt 196  Q
    || |||||||| |||||||||||| || || || |||||| |||| |||||||| | |||| |||||||||||||||||||||||    
T  1837584 acaattttgttcgatttaaaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcctattt 1837500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 34555558 - 34555377
Alignment:
Q  11 aagcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagg 110  Q
    ||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| |||||||||||          |||||||||||||    
T  34555558 aagcatatgtggttgaactaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactg-taaaaaaaacatatagtttagg 34555460  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||| |||||||||||||||| |||| |||||  ||||| ||||||| | |||| ||||||||||||||||||||    
T  34555459 gacgattttgttcgatttaaaagaggtagcaccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaagccta 34555377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 8230013 - 8230190
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||    
T  8230013 cataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgc---aaaaaacatatagtttagggac 8230109  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||||||| |||||||||||||||  ||||||||||| | |   ||||||| |||| | ||||| ||||||||| |||||    
T  8230110 gattttgttcgatttaaaagaggtataaccattttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaaacctat 8230190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 17641734 - 17641912
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncata--tagtttag 109  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||          | |  ||||||||    
T  17641734 agcataggtggttgaactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaataaaaatagtttag 17641833  T
Q  110 ggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||  ||||||| |||||| |||||||||||||||    
T  17641834 ggacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 8229816 - 8229635
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| || |||| ||||||||| |||||| ||||||||||||||||| ||||||||| |||| ||||||||||||         |||||||||||| |    
T  8229816 agcatatgtagttggactaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaaacatatagtttagag 8229717  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||| || ||||||||||| |||| | ||||||||| |||| ||||||||  ||||||||||||||||||||||||||    
T  8229716 acgattttattcgatttaaaagatgtagaatcattttcgtgagttgatcaaaatgtgaggatcaaaagtgtaattaagccta 8229635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 34555750 - 34555931
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||         ||||||||||| ||    
T  34555750 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgc-aaaaaaaacatatagtttaagg 34555848  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   ||||  ||||||||||||||| ||||    
T  34555849 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaagtctat 34555931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 44954596 - 44954771
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  44954596 agcataggtggtttgactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttatgg 44954692  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    | ||||||||||||||||||| ||||| || ||||||| | ||||  ||||||| |||||| |||||||||||||||||    
T  44954693 atgattttgtttgatttaaaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 44954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 10278725 - 10278550
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||| |||||||||||||||||| |||| ||| |||| ||||||||||||         ||||||||||||||    
T  10278725 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaa--catatagtttaggg 10278628  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||| |||||||||||||||||| || |||||| ||||  ||||||| | |||| ||||||||||||||||    
T  10278627 acgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 10278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 30786948 - 30786770
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||  |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||||||||    
T  30786948 agcataagtggttggactaaaaccgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa---catatagtttaggg 30786852  T
Q  112 acgattttgtttgatttaaaagaggtaggacc-attttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||  ||||||| | || | |||||||||||||||||||    
T  30786851 acgattttgttcgatttaaaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaagcct 30786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 52335880 - 52336057
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||    
T  52335880 agcatatgtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaa---atatagtttaggg 52335976  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||||||||| |||| | ||||  |||||||   || | |||||| ||||||||||||    
T  52335977 acgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaagcct 52336057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 37421338 - 37421158
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||  ||||||||| |||||| ||||||||| |||||||||||||||||  ||||||||||||||||         ||||||||||||||    
T  37421338 agcataggtggttagactaaaactgtcatttctgtgcgtttttggagttggaaatagggaaatatgactaaaactgc-aaaaaaaacatatagtttaggg 37421240  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||| ||||| |||||| | ||  ||||||| | | || ||||||||||||||| ||||    
T  37421239 acgattttgttcgatttaaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaaaccta 37421158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 1744500 - 1744330
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||    
T  1744500 ataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaat--atatagtttagggacg 1744403  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||| ||||| |  ||| |||||||| ||||| ||| ||||  ||||||||||| || ||||||||||||||||    
T  1744402 attttatttgact--aaaaaggtaggatcatttacgtgagtttgtcaaaatacgaagaccaaaagtgtaattaag 1744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 4080195 - 4080020
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    ||||| |||||| ||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||          ||||||||||||||||    
T  4080195 catagatggttggactaaaactgtcatttttgtgcgtttctagagttggaaatagggagatatgactaaaactg---taaaaaacatatagtttagggac 4080099  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||| ||||||||| ||||| || || |||||| ||||  |||| || | |||| ||||||||||||| |||||    
T  4080098 gattttgttcgatttaaaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaattgagcct 4080020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 443921 - 444103
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| || |||||| |||| |||||||||||| |||| ||||||||||||         |||||||||||||     
T  443921 agcataggtggttggactaaaactgtcatttatgcgcgtttatggaattggaaatagggagataggactaaaactgcaaaaaa---catatagtttagga 444017  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||| ||||||||||||||| ||| | |||||| ||||  ||||||| | | |||||||||| |||||||||| |||||    
T  444018 acgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaagatcaaaagtataattaagccaatttt 444103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 21938739 - 21938566
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  21938739 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttatgg 21938643  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||| || || || ||||||||| |||| ||||||||   | || |||||||||||||||    
T  21938642 acgattttgttcgatttaaaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaa 21938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 23340359 - 23340183
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| || ||||||||||||||||||||| || |||||||||||||||||          |||||||||| |     
T  23340359 agcatatgtggttgaactaaaactgtcatttctgagcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaat---atatagtttatga 23340263  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
     |||||||||| |||||||||||| |||||||| |||||| ||||  ||||||| | | |||||||||||||||||||||    
T  23340262 gcgattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaagcc 23340183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 29439107 - 29438929
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| | ||||||||| |||| | || ||| |||||| | |||| ||||||||||||         ||| ||||||||||    
T  29439107 agcataggtggttggactaaaactgttatttttgtgtgttttttgaattgaaaatagagagataggactaaaactgcaaaaaaa--catttagtttaggg 29439010  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||| | |||| |||||||||||||||||||    
T  29439009 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 29438929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 37505438 - 37505613
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||| |||| ||||||||||||         ||||||||||| ||    
T  37505438 agcataggtggttggactaaaactgtcatttttgtgcgtttttggagttgaaaatagggagataggactaaaactgc----aaaaacatatagtttatgg 37505533  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||||| |||||||||| || || || |||||| ||||  ||||||||  |||| ||||| | ||||||||||    
T  37505534 acgattttgtttgttttaaaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaagcc 37505613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 16298858 - 16298683
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| | ||||||||  ||||||||||||||  |||| ||||||||||||         ||||||||||||||    
T  16298858 agcataggtggttggactaaaactatcatttatttgcgtttccagagttggaaataggtagataggactaaaactgcaaaaaa---catatagtttaggg 16298762  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    ||||||||||| ||||||||||||||| ||||| |||||| ||||  ||||||| | |||  ||||| |||||||||||    
T  16298761 acgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaagggccaaaaatgtaattaagc 16298683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 39485158 - 39485063
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || || ||||||| |||||| ||||||||||||||| ||||    
T  39485158 catatagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaaaccta 39485063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 9992331 - 9992152
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||| | ||||||||| |||||| |||| |||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  9992331 agcataggtggtcggactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaagg 9992235  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatc-aaaatacgaggatcaaaagtgtaattaagccta 193  Q
    || |||||||| ||||||||| || ||||||||||| ||| ||||  || |||||   |||| ||||||||||||||||||||    
T  9992234 accattttgttcgatttaaaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaagccta 9992152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 10278922 - 10279093
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||| ||||||| ||||||||| |||||| |||| ||||||||||||||| ||| || |||| |||||||||||          ||||||||||| ||||    
T  10278922 catatgtggttggactaaaactgtcatttctgtgtgtttctggagttggatatatggagataggactaaaactg------aaaacatatagtttaaggac 10279015  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||| ||||||||| || ||||||||||||||| ||||  ||||||    |||||||||||||||||||||||    
T  10279016 gattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaagcc 10279093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 44582233 - 44582059
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||| ||||||||| |||||||||||| |  | |||| ||||||||||||         |||||| ||||| |    
T  44582233 agcataggtggttggactaaaattgtcatttatgtgcgtttatggagttggaaacaaagagataggactaaaactgcaaaaaa---catataatttagag 44582137  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  |||||||   |||| ||||||||||||||||    
T  44582136 acgattttgttcgatttaaaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaag 44582059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 50304532 - 50304441
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||| |||||||||||| ||||||||||||||| |||||||||||| ||||  ||||||| |||||| ||||||||||||||||    
T  50304532 catatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 50304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 938850 - 938788
Alignment:
Q  192 tattttataatataagagactaaaaggatattttattttttccatgtgagataggaaattttt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  938850 tattttataatataagagactaaaaggatattttattttttccatgtgtgataggaaattttt 938788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 9992525 - 9992701
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||| |||||| | ||||||| |||||| |  ||||||||||||||| |||||||| |||| |||||| |||||         ||||||||||| |     
T  9992525 agcatagatggttggattaaaactgtcatttctacgcgtttctggagttgaaaatagggagataggactaatactgcaaaaaa---catatagtttaagc 9992621  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || ||||||||||||| | ||||  ||||||| | |||| ||||||||||||||||||    
T  9992622 acgattttgttcgatttaaaaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagcc 9992701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 45048248 - 45048158
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||  ||||||| | |||| |||||||||||||||    
T  45048248 catatagtttatggacgattttgttcaatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 44954402 - 44954252
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| |||||||||||||||||||||| || | |||| ||||||||||||         |||||| ||||  |    
T  44954402 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttggaaacagagagatacgactaaaactgc---aaaaaacatataatttaaag 44954306  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaat 165  Q
    ||||||||||| ||||||||| ||||| |||||||||||| ||||  |||||||    
T  44954305 acgattttgttggatttaaaaaaggtatgaccattttcgtgagttggtcaaaat 44954252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 16299055 - 16299229
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| ||||||| | |||||| |||||||||||||||||||||||| || |||| ||||||||||||         ||||||||||| |||||    
T  16299055 ataggtggttgaactaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgc---aaaaaacatatagtttaaggacg 16299151  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||| || | |||||| |  ||||||||||||||  |||| ||||||||   ||||  |||||| ||||||||||||    
T  16299152 attttg-ttcaattaaaaaaaataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaagccta 16299229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 17088593 - 17088687
Alignment:
Q  99 atatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||||||| ||||||||||||| ||||||| | |||||||||||| || |  |||||||  ||||| ||||||||||||||||||||    
T  17088593 atatagtttagggacggttttgtttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaagccta 17088687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 29021234 - 29021413
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| || |||||| |||||| |||||||||||||||||| |||||||||| || ||||||||||||            ||| |||||||    
T  29021234 agcataggtggttggacaaaaactgtcatttatgtgcgtttctggagttgaaaataggggg-taagactaaaactgcaaaaaaccg-tgataatttaggg 29021331  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||| ||||||| | || ||||||||| || |  |||||||  ||||| |||||||| |||||||||||    
T  29021332 acgattttgttcgatttgaaagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagccta 29021413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 50305152 - 50305289
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| || |||| | ||||||| |||||| |||| |||| |||||||| |||||||| |||||||||||||||||          |||||||||| ||    
T  50305152 agcataagtagttggattaaaactgtcatttatgtgtgtttatggagttgaaaatagggagatatgactaaaactgcaaaaaaaaatatatagtttaagg 50305251  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttc 149  Q
    ||||||||||| ||||||||| || |||||||||||||    
T  50305252 acgattttgttcgatttaaaaaagataggaccattttc 50305289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 9833522 - 9833698
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||| | ||||||| | | |||| |||||||||||||||||| |||||||||| || ||||||||||||          ||||  |||||||    
T  9833522 agcataggtggtaggactaaaaatgttatttctgtgcgtttctggagttgaaaataggggg-taggactaaaactgcaaaaaacataatat--tttaggg 9833618  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||| ||||||| | ||| |||||||| ||||  ||||| ||| ||||||||||||  |||||||||    
T  9833619 acgattttgttcgatttgaaagaggcatgactattttcgtgagttggtcaaagtacaaggatcaaaagtacaattaagcc 9833698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 17641539 - 17641405
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| ||||  ||||||||| |         | ||||||||| | ||    
T  17641539 cataggtggttgaactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaactaaaactac---aaaaaacgtatagtttaagaac 17641443  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgt 151  Q
     |||||||| ||||||||| ||||| ||||||||||||    
T  17641442 aattttgttcgatttaaaaaaggtatgaccattttcgt 17641405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 37505229 - 37505066
Alignment:
Q  27 actaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgat 126  Q
    ||||||||| |||||| ||| | ||| |||||||| ||||||||  ||| ||||||||||||         ||||||||||| ||||||||||||| |||    
T  37505229 actaaaactgtcatttctgttcatttttggagttgaaaatagggaaataggactaaaactgcaaaaaaa--catatagtttaaggacgattttgttcgat 37505132  T
Q  127 ttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||| || ||| ||||||||||| ||||  |||||||   |||| |||||||||||||||||||    
T  37505131 ttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 37505066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 50926611 - 50926790
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| |||||||||  ||||| |||| |||| |||||||| ||||||||||  | ||||||||||||            |||||||||||    
T  50926611 agcataggtggttggactaaaactaccatttatgtgtgtttatggagttgaaaatagggggtaaggactaaaactgcaaaaaaatg---atagtttaggg 50926707  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||| ||||||| ||||| ||||||   ||||||||||||| || |  ||||||| ||| || |||||||||||||||||||||    
T  50926708 acggttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaagcctat 50926790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 30787251 - 30787351
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||| ||||||||||||| ||||| ||| || || |||||||||||| |||| ||| ||||   ||||||||||||||||||||||||| |||    
T  30787251 catatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaagcctaattt 30787350  T
Q  198 a 198  Q
    |    
T  30787351 a 30787351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 2868077 - 2867913
Alignment:
Q  22 gttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgt 121  Q
    |||| ||||||||| |||||| ||||||||| ||||||| || ||||||  ||||||||||||||||         |||||||||||  ||| |||||||    
T  2868077 gttggactaaaactgtcatttatgtgcgtttttggagttagagatagggaaatatgactaaaactgcaaaaaa---catatagtttaacgacaattttgt 2867981  T
Q  122 ttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    | |||||||||||| || || ||||||||| ||||  ||||||| ||| || ||||| ||||||||||    
T  2867980 tcgatttaaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaag 2867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 6224875 - 6224800
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactg 87  Q
    |||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  6224875 agcataggtggtttgactaaaactgtcatttatgtgcgtttctggagttggaaatagagagataagactaaaactg 6224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 48174178 - 48174273
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattt 196  Q
    |||||||||||||| ||||||||||||||||||||  || ||| ||||||| || | ||||||||||||  ||||| ||||||||| |||||||||    
T  48174178 atagtttagggacggttttgtttgatttaaaagagacagaaccgttttcgtgagctgatcaaaatacgaaaatcaatagtgtaatttagcctattt 48174273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 50926408 - 50926232
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncat-atagtttagg 110  Q
    |||||||||||||| |||||||||  ||||| |||| ||||||||||||| ||||||| ||  | ||||||||||||          || ||||||||||    
T  50926408 agcataggtggttggactaaaactaccatttatgtgtgtttctggagttgaaaataggaggtaaggactaaaactgcaaaaaaaa--atgatagtttagg 50926311  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||| ||||| ||||||||| ||  |||||||| || |  |||||||  ||||| ||||| ||||||||||    
T  50926310 gacgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaag 50926232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 44582427 - 44582603
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcg-tttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagg 110  Q
    |||||||||||||| ||||||||| |||||| |||||| ||| ||||| || |||||||| || | ||||||||||||         |||||||||||      
T  44582427 agcataggtggttggactaaaactgtcatttctgtgcgttttttggagctgaaaatagggagacaagactaaaactgc--aaaaaaacatatagtttaaa 44582524  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||| ||||| |||  | || |||||||||||| |||| ||||||||   || | ||||||||||||||||    
T  44582525 gacgattttgttcgatttgaaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaag 44582603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 23526748 - 23526659
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    ||||| |||||| ||||||||| ||||||||||||| |||||||||||||| || |  |||||||  ||||| ||||||||||| |||||    
T  23526748 atagtctagggatgattttgttcgatttaaaagaggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaactaagc 23526659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 50304958 - 50304882
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    |||||||||||||| | ||||| |  |||||||||| |||| ||||||| ||||||||| |||||||||||||||||    
T  50304958 agcataggtggttggattaaaattgccatttttgtgtgtttatggagtttgaaatagggagatatgactaaaactgc 50304882  T

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Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 29439375 - 29439442
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaat 165  Q
    ||||||||||| ||||||||||||| ||||||||| || ||||| ||||||||| |||| ||||||||    
T  29439375 catatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttgatcaaaat 29439442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 23526986 - 23527074
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||| |||| ||||||| ||||||||| ||| | |||||||||| | || | ||||||||  ||||||||||||| ||||||||    
T  23526986 atagtttagagacggttttgttcgatttaaaaaaggcatgaccattttcatgagctgatcaaaatgtgaggatcaaaagtataattaag 23527074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 39485509 - 39485589
Alignment:
Q  116 ttttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattt 196  Q
    ||||||||||||| ||||||| || ||||||||| | || | || ||||| |||||||||||||| |||||||||| ||||    
T  39485509 ttttgtttgatttgaaagaggcagaaccattttcatgagctgattaaaatgcgaggatcaaaagtataattaagcccattt 39485589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 44802627 - 44802719
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||||||||||||   ||| ||||||| | ||||| |||||| || |  ||||||| | |||| ||||||||||||||||||||    
T  44802627 atagtttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagccta 44802719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 36228883 - 36228792
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||||   |||||||  |||||||||||||| ||||||||| || || | || |||||  |||||||||||||| ||||||||||    
T  36228883 atagtttagggatcgttttgttcaatttaaaagaggtaagaccatttttgtgagctgattaaaatgtgaggatcaaaagtgcaattaagcct 36228792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 45048592 - 45048693
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttata 200  Q
    |||||||||| ||| ||||||| ||||  ||||||||| |||||||||||| |  |  ||||||| |||||| ||||||||||||||| |||| || |||    
T  45048592 atagtttagg-acggttttgttcgattggaaagaggtatgaccattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaaacctaattcata 45048690  T
Q  201 ata 203  Q
    |||    
T  45048691 ata 45048693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 25274845 - 25274760
Alignment:
Q  102 tagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaatta 187  Q
    ||||||||| ||| ||||||| ||||| ||||||| | |||||||||||| || |  ||||||| |||||| |||||||| |||||    
T  25274845 tagtttaggaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgcaatta 25274760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 37421397 - 37421465
Alignment:
Q  98 catatagtttagggacgattttgtttgattt-aaaagaggtaggaccattttcgtaagttaatcaaaat 165  Q
    ||||||||||| ||||||||||||| ||||| |||| || ||||||||||||||| ||||  |||||||    
T  37421397 catatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaat 37421465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 26859573 - 26859607
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||| |||||||||||||||||||||||||||||    
T  26859573 caaaacacgaggatcaaaagtgtaattaagcctat 26859607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 15173607 - 15173643
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctattt 196  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  15173607 caaaacacgaggaccaaaagtgtaattaagcctattt 15173643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 18984172 - 18984116
Alignment:
Q  138 aggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||||| |||||| |||  | ||||| ||||||| |||||||||||||||||||||    
T  18984172 aggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcctat 18984116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 44291391 - 44291303
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||| |||||||||||||  |||| ||||||| |  ||||||||||| || |  |||||||  ||||| |||||||| |||||||    
T  44291391 atagtttatggacgattttgttcaatttgaaagaggcataaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaag 44291303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 50970345 - 50970274
Alignment:
Q  123 tgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatt 195  Q
    |||||||||||||  ||||||| |||||| |||    ||||| ||||||| ||||||||||||||||||||||    
T  50970345 tgatttaaaagagc-aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 50970274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 52268321 - 52268289
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||||| |||||||||||||||||||    
T  52268321 caaaatacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 7910986 - 7911162
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| |||||||| |||||| |||||||||||||||||||          |||||||||||||    
T  7910986 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttgaaaatagagggatatgactaaaactgcaaaaaat---atatagtttaggg 7911082  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||  ||||||| ||||||| |||||||||||||||||    
T  7911083 acgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaagcc 7911162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 28254796 - 28254971
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||          |||||||||||||    
T  28254796 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaatt---atatagtttaggg 28254892  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||| | |||| |||||||||||||||||    
T  28254893 acgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 28254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 9796902 - 9796726
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||         ||||||||||| ||    
T  9796902 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgc---aaaaaacatatagtttatgg 9796806  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    | ||||||||| ||||||||||||||||||||| ||| || ||||  ||||||| | |||| ||||||||||||||||||    
T  9796805 atgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 9796726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 35427182 - 35427360
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| |||  ||||||||||||          ||||| |||||||    
T  35427182 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaat---atataatttaggg 35427278  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| | |||||||||||||| ||||||||||| ||||  ||||||| |||||| ||||||||||||||||||||    
T  35427279 acgattttgttcggtttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagccta 35427360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 42036144 - 42036320
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||||||||||| | | ||| ||||||||||||         |||||||||||||||||    
T  42036144 ataggtggttggactaaaactgtcatttttgtgcatttctggagttggaaatatgagaatacgactaaaactgcaaaaaaa--catatagtttagggacg 42036241  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||| ||||||||||||||| || ||||||||||||||  ||||||| ||| ||| |||||| ||||||||||||    
T  42036242 attttgttcgatttaaaagaggtaagatcattttcgtaagttggtcaaaatgcgaagatgaaaagtataattaagccta 42036320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 34799453 - 34799632
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||  |||| ||||||||||||         ||||||||||||||    
T  34799453 agcataggtggttgaactaaaactatcatttatgtgcgtttatggagttggaaataggaagataggactaaaactgcaaaaaa---catatagtttaggg 34799549  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    || |||||||| ||||||||||||||||||||| |||||| | ||  |||||||   |||| |||||||||||||||||||||    
T  34799550 acaattttgttcgatttaaaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaagcctat 34799632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 15256203 - 15256379
Alignment:
Q  17 aggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgat 116  Q
    ||||||||| ||||||| | |||||| ||||||||||||||||||||||||||| |||||||||| ||||||         ||||||||||| |||||||    
T  15256203 aggtggttggactaaaattgtcatttctgtgcgtttctggagttggaaatagggagatatgactagaactgcaaaaaaaaacatatagtttaaggacgat 15256302  T
Q  117 tttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||| ||||||||| || ||||||||||||| | ||||  |||||||   |||| ||||||||||||||||||||    
T  15256303 tttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 15256379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 18428131 - 18428314
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| || |||||||||         ||||||||||| ||    
T  18428131 agcatagatggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgc--aaaaaaacatatagtttaagg 18428228  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||   |||| ||||||||||||||| ||| ||||    
T  18428229 acgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaacctttttt 18428314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 41260631 - 41260809
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| |||||||||||||||||| |||||||| |||| ||||||||||||         ||||||||||||||    
T  41260631 agcataagtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaa---catatagtttaggg 41260727  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| ||||||||||||||| || || |||||| |||| |||||||| | | || ||||||| ||||||||||||    
T  41260728 acgattttgttcgatttaaaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaagccta 41260809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 599704 - 599531
Alignment:
Q  16 taggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacga 115  Q
    ||||||| || ||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||         |||||| |||||||| ||    
T  599704 taggtggctggactaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgc---aaaaaacatataatttagggatga 599608  T
Q  116 ttttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||| ||||||||||||||| ||||| |||||| ||||  ||||||| | |||| ||||| |||||||||||||    
T  599607 ttttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcct 599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 35694046 - 35693869
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||| ||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| |||||||||||           |||||||||| ||    
T  35694046 agcaaaggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgaaaaaaatat-atatagtttatgg 35693948  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    |||||||| || |||||||||||||||| | ||||||||||| ||  ||||||| | ||||||||||||||||||||||    
T  35693947 acgattttattcgatttaaaagaggtagaatcattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaagc 35693869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 190
Target Start/End: Complemental strand, 42035948 - 42035773
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||||||||||||| ||||||| ||||||||| |||| |||||||| |||          |||||||||| ||    
T  42035948 agcatatgtggttggactaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatat---atatagtttatgg 42035852  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagc 190  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||  |||||||  ||||| |||||||||||||||||    
T  42035851 acgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 42035773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 28254602 - 28254422
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||| | ||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  28254602 agcataggtggttggactaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaa--catatagtttaagg 28254505  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    |||||||||||  |||||||| || ||||||||||||||| |||| ||||||||   |||| |||||||||||||||| ||||    
T  28254504 acgattttgttcaatttaaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaagtctat 28254422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 18049767 - 18049590
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| | ||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  18049767 agcataggtggttggattaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagtttaagg 18049670  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || ||| ||||||||||| ||||  |||||||   |||| ||||||||||||| ||||    
T  18049669 acgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattgagcc 18049590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 193
Target Start/End: Original strand, 6115481 - 6115659
Alignment:
Q  13 gcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggga 112  Q
    ||||| ||||||| ||||||||| |||||| ||||||||||| |||||| ||||| || ||||  ||||||||| |         |||||||||||||||    
T  6115481 gcataagtggttggactaaaactgtcatttctgtgcgtttcttgagttgaaaataaggagatagaactaaaactacaaaaaaa--catatagtttaggga 6115578  T
Q  113 cgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||| ||||||||||||||||||||| |||||  ||||  ||||||||| |||| ||||||| ||||||||||||    
T  6115579 cgattttgttcgatttaaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaagccta 6115659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 193
Target Start/End: Complemental strand, 15255987 - 15255851
Alignment:
Q  54 tggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaa 153  Q
    ||||||||||||||||| |||| ||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |    
T  15255987 tggagttggaaatagggagataggactaaaactgcaaaaaa---catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtga 15255891  T
Q  154 gttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||  ||||||| | |||| ||||||||||||||||||||    
T  15255890 gttggtcaaaatgcaaggaccaaaagtgtaattaagccta 15255851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 18049961 - 18050134
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| | ||||||| | |||| |||||||||||||||||| |||||||| |||| || |||||| ||         ||||||||||||||    
T  18049961 agcataggtggttggagtaaaactgttatttctgtgcgtttctggagttgaaaatagggagataggattaaaacagcaaaaaa---catatagtttaggg 18050057  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||||||||| ||||| |||||| ||||  ||||||| | |||| ||||| |||||||||    
T  18050058 acgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 18050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 195
Target Start/End: Original strand, 599868 - 600048
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| ||||||||| |||||| | |||||||||||| |||||||||| | |||| ||||||||||||         ||||||||||| ||    
T  599868 agcataagtggttggactaaaactgtcatttctatgcgtttctggaattggaaatagagagataagactaaaactgcaaaaaa---catatagtttaagg 599964  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatt 195  Q
    |||||||||||  |||||||| || || |||||||||||| ||||  |||||||   |||| ||||||||||||||||||||||    
T  599965 acgattttgttccatttaaaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaagcctatt 600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 16578285 - 16578106
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgt-gcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagg 110  Q
    ||||||| |||||| ||||||||| |  ||||| | |||||||||||||||||||||||| |||| ||| ||||||||         |||||| ||||||    
T  16578285 agcatagatggttggactaaaactgtttttttttttgcgtttctggagttggaaatagggagataggaccaaaactgcaaaaaa---catataatttagg 16578189  T
Q  111 gacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||| | || | ||||| ||||||||||||||    
T  16578188 gacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaagccta 16578106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 34799256 - 34799077
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  34799256 agcataggtggttggactaaaattgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgc--aaaaaaacatatagtttaagg 34799159  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||| |||||| ||||||||| |  ||||||||||||| | ||||  |||||||   | || ||||||||||||||||||||    
T  34799158 acgactttgttcgatttaaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaagccta 34799077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 9797096 - 9797270
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||  ||||||||| |||||| ||||||||| ||||||||||||||||  ||||  |||||||||||         ||||||||||| ||    
T  9797096 agcataggtggttagactaaaactgtcatttctgtgcgtttatggagttggaaataggtagatagaactaaaactgcaaaaaaa--catatagtttaagg 9797193  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||| |||||||||||| || ||| ||||||||||| ||||  |||||||   |||| |||||||||||||||    
T  9797194 acgattttatttgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9797270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 35694242 - 35694421
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc-----nnnnnnnnncatatagttta 108  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||| ||               ||||||||||    
T  35694242 cataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataagactaaaacagcaaaaaaaaaaaaaaaatatagttta 35694341  T
Q  109 gggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
     ||||||||||||| ||||||||| | ||||||||||||| || ||||| |||||||   |||| |||||||||||||||    
T  35694342 aggacgattttgttcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaa 35694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 26252982 - 26252809
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| |||||| || |||||| || |||||||||||||||||||||||| |||| ||||||||||||         |||||||||||||||||    
T  26252982 ataggtggttggactaaatctgtcatttctgagcgtttctggagttggaaatagggagataggactaaaactgc---acaaaacatatagtttagggacg 26252886  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||| |||||||||||| |   |||| |||||| | ||| ||  ||| | | |||||||||||||||||||||||    
T  26252885 attttgttcgatttaaaagagatgttaccaatttcgtgaattagtc--aatgcaaagatcaaaagtgtaattaagccta 26252809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 2208891 - 2208716
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| | |||| ||| |||||||||| ||| |||||||| ||||||||||||| ||           |||||||||| ||    
T  2208891 agcataggtggttggactaaaactattatttctgtacgtttctggaattgaaaatagggagatatgactaaaattgtaaaaaaat--atatagtttaagg 2208794  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    ||||||||||| ||||||||| || |||||| |||||||| ||||  |||||||   |||||||||||||||||||||    
T  2208793 acgattttgttcgatttaaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaag 2208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 16578466 - 16578644
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||| |||| ||||||||||||         |||||||||||  |    
T  16578466 agcataggtggttggactaaaactgtcatttctgtgcgtttctagtgttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaatg 16578562  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    | ||||||||| ||||| ||| || ||  ||||||||||| ||||  |||||||   |||| ||||||||||||||||||||    
T  16578563 atgattttgttcgatttgaaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaagccta 16578644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 5730990 - 5730815
Alignment:
Q  14 cataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggac 113  Q
    |||||||| ||| ||||||||| |||||| ||| |||||||||||||  |||||||| | || ||||||||| ||         ||||||||||| ||||    
T  5730990 cataggtgattg-actaaaactgtcatttctgtacgtttctggagttaaaaatagggaggtaggactaaaacagcaaaaaa---catatagtttaaggac 5730895  T
Q  114 gattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||||||||| || |||||| |||||||| ||||  |||||||   |||| ||||||||||||||||||||    
T  5730894 gattttgtttgatttaaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 5730815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 7910709 - 7910615
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||| |||||||||||||||||| |||||||||||||||  ||||||||||| |||| ||||||||  ||||| ||||| |||||||||||||    
T  7910709 catataatttagggacgattttgttcgatttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaagcct 7910615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 5731182 - 5731316
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||| ||||  |||||||||||         ||||||||||| ||    
T  5731182 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatagaactaaaactgc---aaaaaacatatagtttatgg 5731278  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttc 149  Q
    ||||||||||| |||||| || |||||| |||| ||||    
T  5731279 acgattttgttcgatttataaaaggtagaaccaatttc 5731316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 41260409 - 41260270
Alignment:
Q  50 tttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatttaaaagaggtaggaccattttc 149  Q
    ||||| ||||||||||||||| |||| ||||||||||||         ||||||||||| ||||||||||||| ||||||||| || |||||||||||||    
T  41260409 tttctagagttggaaatagggagataagactaaaactgcaaaaaa---catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttc 41260313  T
Q  150 gtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
     | ||||  |||||||   |||| |||||||||||||||||||    
T  41260312 atgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 41260270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 35163874 - 35163816
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaataggg 70  Q
    |||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||||    
T  35163874 agcataggtggttggactaaaactgtcatttctgtgcgtttctcgagttggaaataggg 35163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 28876993 - 28876910
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaa 184  Q
    |||||||||||||||||||||| ||||| ||||||| || |  |||||||| || | |||||||| |||||| |||||||||||    
T  28876993 atagtttagggacgattttgttcgatttgaaagaggcagaattattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaa 28876910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 18674241 - 18674147
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||||||||||||||||| |||||||||| || || |||| |||||| | ||  ||||| | | |||| ||| |||||||||||||||    
T  18674241 catatagtttagggacgattttgttcgatttaaaagtggaagaaccaatttcgtgaattggtcaaagtgcaaggaccaagagtgtaattaagcct 18674147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 28877350 - 28877432
Alignment:
Q  106 ttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||| ||||||||  |||| |||||||||  ||||||||||| ||||  ||||||| |||||| |||||||||||||||    
T  28877350 ttagggacaattttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 35426989 - 35426917
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaa 84  Q
    |||||| ||||||  ||||||||| |||||| ||||||||| ||||||||||||||||| |||| || |||||    
T  35426989 agcatatgtggttagactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggagtaaaa 35426917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 9930171 - 9930203
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||||| |||||||||||||||||||    
T  9930171 caaaatacgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 202
Target Start/End: Original strand, 31574095 - 31574282
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||| | |||||| |||||||||||||||||| |||||||| |||||||||||||||||         ||||||||||||||    
T  31574095 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaa---catatagtttaggg 31574191  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattttataat 202  Q
    ||||||||||| ||||||||||||||| ||| | |||||| ||||  ||||||| | |||| ||||||||||||||||||| |||| ||||    
T  31574192 acgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccttttttttaat 31574282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 5114644 - 5114467
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  5114644 agcataggtggttgaactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaa---catatagtttaagg 5114548  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||||||||| ||||||||| || ||||||||||||||| |||| ||||||||   |||||||||| |||||||||||||    
T  5114547 acgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaagcct 5114467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 31073512 - 31073688
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||         ||||||||||||||    
T  31073512 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc---acaaaacatatagtttaggg 31073608  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    || |||||||| ||||||||||||||| ||||| |||||| || |  ||||||| | |||| ||||||||||||||||||    
T  31073609 acaattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcc 31073688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 25472382 - 25472559
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  25472382 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgc--aaaaaaacatatagtttaagg 25472479  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || || |||||||||||| ||||  |||||||   |||||||||||||||||||||||    
T  25472480 acgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcc 25472559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 193
Target Start/End: Original strand, 5120856 - 5121017
Alignment:
Q  29 taaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgattt 128  Q
    ||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||         ||||||||||||||||||||||||| |||||    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaa---catatagtttagggacgattttgttcgattt 5120952  T
Q  129 aaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||||  | |||||| ||||  ||||||| | |||| ||||||||||||||||||||    
T  5120953 aaaagaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 5121017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 29891256 - 29891077
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| ||||  | ||||| ||          ||||||||||||||    
T  29891256 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaattaaaattg---taaaaaacatatagtttaggg 29891160  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||| ||||||| | ||||||||||||| || || |||||||||||| |||||||   |||| |||||||||||||||||||||    
T  29891159 acgcttttgttcggtttaaaagaggtatgatcaatttcgtaagttagtcaaaatgtaaggaacaaaagtgtaattaagcctat 29891077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 24640555 - 24640728
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| |||| |||| |||||| |||||||||  |||||||||||||||| |||| ||||||||||||         ||||||||||| ||    
T  24640555 agcataggtggttggactagaactgtcatttctgtgcgttttcggagttggaaatagggagataagactaaaactgcaaaaaa---catatagtttaagg 24640651  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||||||||||| ||||||||| || ||||||||||||||| |||| ||||||||   |||| ||||||| |||||||    
T  24640652 acgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtataattaa 24640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 30251064 - 30251240
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacg 114  Q
    ||||||||||| |||||| || |||||| ||||||||||||||||||||||||||| |||| |||||||||| |         || |||||||| |||||    
T  30251064 ataggtggttggactaaatctgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactac--aaaaatacaaatagtttaaggacg 30251161  T
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||| ||||||||| || || ||| ||||| || ||||  ||||||||  |||||||||||||||||||||||||    
T  30251162 attttgttcgatttaaaaaagatatgacaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaagccta 30251240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 25469027 - 25468847
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||||||||||| | ||||||| |||||| |||||||||||||| ||  |||||||| |||| ||||||||||||         ||||||||||||||    
T  25469027 agcataggtggttggaataaaactgtcatttctgtgcgtttctggaatttaaaatagggagataggactaaaactgcaagaaaaa-catatagtttaggg 25468929  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||| |||||||||||| || ||||| |||||| ||||  |||||||   |||| ||||||||||||||| ||||    
T  25468928 acgattttgttcgatttaaaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaaaccta 25468847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 28636435 - 28636287
Alignment:
Q  44 tgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttagggacgattttgtttgatttaaaagaggtaggacc 143  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||         ||||||||||||| ||||||||||| ||||||||||| ||| ||||    
T  28636435 tgtgcatttatggagttggaaatagggagatatgactaaaactgcaaaaa----catatagtttaggaacgattttgttcgatttaaaagaagtaagacc 28636340  T
Q  144 attttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctattt 196  Q
    | |||||| ||||  ||||||||| | || ||||| |||||||||||| ||||    
T  28636339 aatttcgtgagttggtcaaaatacaatgaccaaaaatgtaattaagccaattt 28636287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 28636566 - 28636642
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  28636566 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactgc 28636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 31573901 - 31573718
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc-nnnnnnnnncatatagtttagg 110  Q
    |||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||| |||| ||||||||||||          ||||||||||| |    
T  31573901 agcataggtggttggactaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaaacatatagtttaag 31573802  T
Q  111 gacgattttgtttgattt-aaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
     ||||||||||| ||||| |||| |  |||||| |||||||| ||||  |||||||   |||| ||||||| ||||||||||||    
T  31573801 aacgattttgttcgatttaaaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagccta 31573718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 35163640 - 35163739
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcctatttt 197  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||||||| || |  ||||||| || ||| ||||||||||||||||||| ||||    
T  35163640 catatagtttagggacgattttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagcctttttt 35163739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 29891453 - 29891526
Alignment:
Q  15 ataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  29891453 ataggtggttggactaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc 29891526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 835695 - 835773
Alignment:
Q  115 attttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||| ||||| ||||||| ||||||||||||||||| |  | ||||| |||||| |||||||| |||||||||||    
T  835695 attttgttcgatttgaaagaggcaggaccattttcgtaagctgctaaaaatgcgaggaccaaaagtgcaattaagccta 835773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 22534217 - 22534270
Alignment:
Q  138 aggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||||||||||||| ||||  |||||||||||||| ||||||||||||||||||    
T  22534217 aggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 31242896 - 31242804
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||| |||||  || |||| ||||||||| ||| |||| ||||||||| ||||  ||||||| ||||| |||||||||||||||| ||||    
T  31242896 atagtttggggacagttatgttcgatttaaaaaaggcaggatcattttcgtgagttggtcaaaatgcgagggtcaaaagtgtaattaaaccta 31242804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 33095804 - 33095716
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||||| ||||||| ||||| ||||||||  |||||||||||  || | || ||||| |||||| |||||||| |||||||    
T  33095804 atagtttagggacggttttgttcgatttgaaagaggtgagaccattttcgcgagctgataaaaatgcgaggaccaaaagtgcaattaag 33095716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 30250867 - 30250809
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaataggg 70  Q
    |||||| ||| ||| ||||||||| |||||| |||||||||||| ||||||||||||||    
T  30250867 agcataagtgattggactaaaactgtcatttctgtgcgtttctgtagttggaaataggg 30250809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 835484 - 835392
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||||  ||||||| ||||| ||||||| | |||||||||||| || |  | |||||  ||||| |||||||| |||||||||||    
T  835484 atagtttagggacagttttgttcgatttgaaagaggcaagaccattttcgtgagctgctaaaaatgtgaggaccaaaagtgcaattaagccta 835392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 31073290 - 31073250
Alignment:
Q  48 cgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  31073290 cgtttctggagttggaaataggaagatatgactaaaactgc 31073250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 32836096 - 32836005
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||| ||| ||||||| ||||| ||||||| |||||| |||| || || |  ||||||| | |||||||||||||||||||| ||||    
T  32836096 atagtttagg-acggttttgttcgatttgaaagaggcaggaccgtttttgtgagctggtcaaaatgcaaggatcaaaagtgtaattaaaccta 32836005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 31073222 - 31073143
Alignment:
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || ||||||||||||| |  |||  |||||||   |||| ||||||||||||||||||    
T  31073222 acgattttgttcgatttaaaaaagataggaccattttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaagcc 31073143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 1149496 - 1149462
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcctat 194  Q
    ||||| |||||||||||||||||||||||||||||    
T  1149496 caaaacacgaggatcaaaagtgtaattaagcctat 1149462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 32836449 - 32836542
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||| |||||| | ||| ||||||| ||||| ||||||| | |||||||||||| || |  ||||||| | ||||  |||||||||||||||||    
T  32836449 catacagtttaagaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaagcc 32836542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 31470346 - 31470314
Alignment:
Q  160 caaaatacgaggatcaaaagtgtaattaagcct 192  Q
    ||||| |||||||||||||||||||||||||||    
T  31470346 caaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 6568 - 6392
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| | ||||||| |||||| |||||||||||| |||||||||||||  |||| ||||||||||||         |||||| |||| ||    
T  6568 agcatatgtggttggaataaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgc---aaaaaacatataatttaagg 6472  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || ||| ||||||||| | |||| ||||||||   |||| |||||||| |||||||||    
T  6471 acgattttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagcc 6392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 6761 - 6939
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaataggggga----tatgactaaaactgcnnnnnnnnncatatagttt 107  Q
    |||||| ||||||| ||||||||| |||||| |||||||||||||||||| |||||||| ||    || ||||||||||||         ||| ||||||    
T  6761 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgc--aaaaaaacatgtagttt 6858  T
Q  108 agggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||| ||||||||||| ||||||||||| ||| ||||| |||||||| ||  ||||||| | |||| |||||| ||||||||    
T  6859 aggtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6939  T

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Target: scaffold0709 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 6586 - 6410
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcnnnnnnnnncatatagtttaggg 111  Q
    |||||| ||||||| | ||||||| |||||| |||||||||||| |||||||||||||  |||| ||||||||||||         |||||| |||| ||    
T  6586 agcatatgtggttggaataaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgc---aaaaaacatataatttaagg 6490  T
Q  112 acgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    ||||||||||| ||||||||| || ||| ||||||||| | |||| ||||||||   |||| |||||||| |||||||||    
T  6489 acgattttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagcc 6410  T

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Target: scaffold0709; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 6779 - 6957
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaataggggga----tatgactaaaactgcnnnnnnnnncatatagttt 107  Q
    |||||| ||||||| ||||||||| |||||| |||||||||||||||||| |||||||| ||    || ||||||||||||         ||| ||||||    
T  6779 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgc--aaaaaaacatgtagttt 6876  T
Q  108 agggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    ||| ||||||||||| ||||||||||| ||| ||||| |||||||| ||  ||||||| | |||| |||||| ||||||||    
T  6877 aggtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6957  T

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Target: scaffold1432 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 518 - 613
Alignment:
Q  98 catatagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    |||||||||||| |||  ||||||| ||||| ||||||| | |||||||||||| || |  ||||||| |||||||||||||||||||||||||||    
T  518 catatagtttagagactgttttgttcgatttgaaagaggcaagaccattttcgtgagctcgtcaaaatgcgaggatcaaaagtgtaattaagccta 613  T

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Target: scaffold0007 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 210793 - 210884
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcct 192  Q
    |||||||||||||| ||||||| ||||| ||||||| |||||||||||| | ||||  |||||||  ||||| |||||||||||||||||||    
T  210793 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagcct 210884  T

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Target: scaffold0007; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 205018 - 204926
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||  |||| || |  ||||||||| |||| ||||||||||||||| ||||    
T  205018 atagtttagggacaattttgtttgatttgaaagaggaaggaccatagtcgtgagctggtcaaaatacaaggaccaaaagtgtaattaaaccta 204926  T

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Target: scaffold0007; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 205823 - 205911
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaag 189  Q
    |||||||||||||| ||||||| ||||| ||||||| |||||||||||||| ||||  |||||||  |||||  |||||||||||||||    
T  205823 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

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Target: scaffold0007; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 205448 - 205356
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagccta 193  Q
    ||||||||||||| | |||||| ||||| ||||||| ||||||||  |||| || |  ||||||||| |||||||||||||||||||| ||||    
T  205448 atagtttagggacaaatttgttcgatttgaaagaggaaggaccatagtcgtgagctggtcaaaatacaaggatcaaaagtgtaattaaaccta 205356  T

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Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 78493 - 78417
Alignment:
Q  12 agcataggtggttgcactaaaactctcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgc 88  Q
    |||||||||||||| ||||||| | |||||| | ||| ||||||||||||||||||| | |||| ||||||||||||    
T  78493 agcataggtggttggactaaaattgtcatttctatgcatttctggagttggaaatagagagataggactaaaactgc 78417  T

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Target: scaffold0108 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 15554 - 15644
Alignment:
Q  101 atagtttagggacgattttgtttgatttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaagcc 191  Q
    |||||||||||||  ||||||| ||||| ||||||  |||||||||||||| || | |||||||| |||| | ||||| | ||||||||||    
T  15554 atagtttagggacagttttgttcgatttgaaagagtcaggaccattttcgtgagctgatcaaaatgcgagaaccaaaaatctaattaagcc 15644  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 61939 - 62000
Alignment:
Q  126 tttaaaagaggtaggaccattttcgtaagttaatcaaaatacgaggatcaaaagtgtaattaa 188  Q
    |||||||| ||||||||||||||||| |||  | ||||| |||||||||||||||||||||||    
T  61939 tttaaaag-ggtaggaccattttcgtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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