View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10346_low_45 (Length: 254)

Name: NF10346_low_45
Description: NF10346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10346_low_45
NF10346_low_45
[»] chr3 (59 HSPs)
chr3 (147-237)||(49476863-49476955)
chr3 (33-115)||(49476777-49476859)
chr3 (1-33)||(7858243-7858275)
chr3 (3-35)||(38511657-38511689)
chr3 (1-36)||(44184252-44184287)
chr3 (1-35)||(3212433-3212467)
chr3 (1-35)||(5577214-5577248)
chr3 (3-33)||(9630768-9630798)
chr3 (3-33)||(14004117-14004147)
chr3 (2-36)||(20982277-20982311)
chr3 (1-35)||(25053865-25053899)
chr3 (1-35)||(27857416-27857450)
chr3 (3-33)||(36373828-36373858)
chr3 (1-39)||(42230312-42230350)
chr3 (1-35)||(47530337-47530371)
chr3 (1-35)||(53192394-53192428)
chr3 (1-34)||(22202483-22202516)
chr3 (1-38)||(28964435-28964472)
chr3 (1-33)||(257717-257749)
chr3 (3-35)||(2118997-2119029)
chr3 (1-33)||(2239511-2239543)
chr3 (1-33)||(8313949-8313981)
chr3 (1-33)||(10864115-10864147)
chr3 (1-33)||(10864400-10864432)
chr3 (1-33)||(12881235-12881267)
chr3 (1-33)||(12881496-12881528)
chr3 (1-33)||(14904442-14904474)
chr3 (3-35)||(17483559-17483591)
chr3 (3-35)||(17483841-17483873)
chr3 (1-33)||(17916364-17916396)
chr3 (1-33)||(19391638-19391670)
chr3 (1-33)||(19391984-19392016)
chr3 (1-33)||(19914753-19914785)
chr3 (1-33)||(20982540-20982572)
chr3 (1-33)||(21841727-21841759)
chr3 (1-33)||(26494685-26494717)
chr3 (1-33)||(27748244-27748276)
chr3 (1-33)||(27748524-27748556)
chr3 (1-33)||(27766518-27766550)
chr3 (1-33)||(27766798-27766830)
chr3 (3-35)||(27984137-27984169)
chr3 (1-33)||(28964153-28964185)
chr3 (3-31)||(33622149-33622177)
chr3 (1-33)||(37182004-37182036)
chr3 (1-33)||(41281845-41281877)
chr3 (3-35)||(41282130-41282162)
chr3 (1-33)||(42465691-42465723)
chr3 (1-33)||(44177288-44177320)
chr3 (1-33)||(44183972-44184004)
chr3 (1-33)||(44895929-44895961)
chr3 (1-33)||(45743899-45743931)
chr3 (1-33)||(45744180-45744212)
chr3 (3-35)||(45760516-45760548)
chr3 (1-33)||(47423409-47423441)
chr3 (1-33)||(47530621-47530653)
chr3 (3-35)||(51213305-51213337)
chr3 (1-33)||(52916859-52916891)
chr3 (1-33)||(53192114-53192146)
chr3 (1-33)||(53532087-53532119)
[»] scaffold0213 (2 HSPs)
scaffold0213 (1-36)||(21063-21098)
scaffold0213 (1-35)||(21328-21362)
[»] chr1 (52 HSPs)
chr1 (1-35)||(866425-866459)
chr1 (3-36)||(18590113-18590146)
chr1 (2-35)||(32038121-32038154)
chr1 (1-33)||(43677103-43677135)
chr1 (1-32)||(8029238-8029269)
chr1 (1-36)||(23793063-23793098)
chr1 (1-36)||(26434971-26435006)
chr1 (1-35)||(3263998-3264032)
chr1 (3-33)||(4243410-4243440)
chr1 (1-35)||(6182980-6183014)
chr1 (3-33)||(6809068-6809098)
chr1 (3-33)||(8028960-8028990)
chr1 (1-35)||(9058164-9058198)
chr1 (1-35)||(12071926-12071960)
chr1 (1-35)||(32341493-32341527)
chr1 (1-35)||(42407166-42407200)
chr1 (2-35)||(2371175-2371208)
chr1 (1-30)||(5225633-5225662)
chr1 (3-32)||(13098032-13098061)
chr1 (3-36)||(22075634-22075667)
chr1 (2-35)||(30294868-30294901)
chr1 (1-33)||(922444-922476)
chr1 (3-35)||(2371460-2371492)
chr1 (3-35)||(6183265-6183297)
chr1 (3-35)||(6491699-6491731)
chr1 (1-33)||(8774298-8774330)
chr1 (1-33)||(11018401-11018433)
chr1 (1-33)||(11051896-11051928)
chr1 (1-33)||(11052178-11052210)
chr1 (1-33)||(11204507-11204539)
chr1 (1-33)||(12690021-12690053)
chr1 (3-35)||(13791858-13791890)
chr1 (1-33)||(15161579-15161611)
chr1 (1-33)||(20017658-20017690)
chr1 (1-33)||(20596144-20596176)
chr1 (1-33)||(23342242-23342274)
chr1 (1-33)||(23356693-23356725)
chr1 (1-33)||(26861274-26861306)
chr1 (1-33)||(27396807-27396839)
chr1 (3-35)||(28503419-28503451)
chr1 (1-33)||(29794693-29794725)
chr1 (1-33)||(30288176-30288208)
chr1 (1-33)||(31797064-31797096)
chr1 (3-35)||(38622686-38622718)
chr1 (3-47)||(41585271-41585315)
chr1 (1-33)||(43914578-43914610)
chr1 (1-33)||(45012632-45012664)
chr1 (1-33)||(45664421-45664453)
chr1 (3-31)||(45680093-45680121)
chr1 (1-33)||(45885230-45885262)
chr1 (3-35)||(52149797-52149829)
chr1 (1-33)||(52233431-52233463)
[»] chr8 (48 HSPs)
chr8 (2-35)||(28596212-28596245)
chr8 (1-33)||(4132754-4132786)
chr8 (1-37)||(40918655-40918691)
chr8 (1-36)||(414664-414699)
chr8 (1-36)||(2321798-2321833)
chr8 (1-36)||(20814022-20814057)
chr8 (2-33)||(27872710-27872741)
chr8 (2-33)||(41554869-41554900)
chr8 (2-33)||(42524710-42524741)
chr8 (3-33)||(994993-995023)
chr8 (3-37)||(4167483-4167517)
chr8 (3-33)||(6014701-6014731)
chr8 (1-35)||(7151123-7151157)
chr8 (1-35)||(20095968-20096002)
chr8 (1-35)||(20283956-20283990)
chr8 (1-35)||(21070584-21070618)
chr8 (1-35)||(39515556-39515590)
chr8 (3-33)||(41625460-41625490)
chr8 (1-34)||(5734466-5734499)
chr8 (1-34)||(7318916-7318949)
chr8 (2-35)||(18531115-18531148)
chr8 (1-30)||(29233545-29233574)
chr8 (2-35)||(31190641-31190674)
chr8 (1-30)||(35409716-35409745)
chr8 (1-34)||(39626249-39626282)
chr8 (1-34)||(39635799-39635832)
chr8 (1-33)||(1657666-1657698)
chr8 (3-35)||(4107131-4107163)
chr8 (1-33)||(6107117-6107149)
chr8 (3-35)||(6641881-6641913)
chr8 (1-33)||(6655559-6655591)
chr8 (1-33)||(6735961-6735993)
chr8 (1-33)||(8870259-8870291)
chr8 (1-33)||(14032036-14032068)
chr8 (1-33)||(20095686-20095718)
chr8 (3-35)||(23233779-23233811)
chr8 (1-33)||(27822875-27822907)
chr8 (1-33)||(30359123-30359155)
chr8 (1-33)||(30845841-30845873)
chr8 (1-33)||(32332140-32332172)
chr8 (1-33)||(36226696-36226728)
chr8 (1-33)||(37205822-37205854)
chr8 (1-33)||(38593187-38593219)
chr8 (1-33)||(39616832-39616864)
chr8 (1-33)||(41693333-41693365)
chr8 (1-33)||(42267739-42267771)
chr8 (1-33)||(42642369-42642401)
chr8 (1-33)||(42906655-42906687)
[»] chr7 (39 HSPs)
chr7 (1-33)||(30699023-30699055)
chr7 (3-38)||(388184-388219)
chr7 (1-35)||(10385730-10385764)
chr7 (1-35)||(19233600-19233634)
chr7 (3-33)||(35121413-35121443)
chr7 (1-35)||(39976727-39976761)
chr7 (1-30)||(18798291-18798320)
chr7 (3-32)||(25036316-25036345)
chr7 (2-35)||(38445402-38445435)
chr7 (1-33)||(3235397-3235429)
chr7 (1-33)||(5096788-5096820)
chr7 (1-33)||(7974672-7974704)
chr7 (3-35)||(10319176-10319208)
chr7 (1-33)||(11900050-11900082)
chr7 (1-33)||(11900331-11900363)
chr7 (1-33)||(16879519-16879551)
chr7 (1-33)||(18852774-18852806)
chr7 (1-33)||(19194160-19194192)
chr7 (1-33)||(19233340-19233372)
chr7 (1-33)||(21782603-21782635)
chr7 (1-33)||(25683956-25683988)
chr7 (1-33)||(25982989-25983021)
chr7 (1-33)||(27432490-27432522)
chr7 (3-35)||(30699307-30699339)
chr7 (1-33)||(34288048-34288080)
chr7 (1-37)||(34404439-34404475)
chr7 (1-33)||(34533214-34533246)
chr7 (1-33)||(35437495-35437527)
chr7 (1-33)||(35924172-35924204)
chr7 (1-33)||(36376060-36376092)
chr7 (3-39)||(37452332-37452368)
chr7 (1-33)||(38053146-38053178)
chr7 (3-35)||(38445689-38445721)
chr7 (1-33)||(38879431-38879463)
chr7 (1-33)||(39753872-39753904)
chr7 (1-33)||(42997056-42997088)
chr7 (1-33)||(43632341-43632373)
chr7 (1-33)||(44214659-44214691)
chr7 (1-33)||(46622554-46622586)
[»] chr5 (34 HSPs)
chr5 (3-35)||(39252-39284)
chr5 (1-33)||(41032467-41032499)
chr5 (3-37)||(8339955-8339989)
chr5 (3-33)||(16666073-16666103)
chr5 (3-33)||(22627266-22627296)
chr5 (1-35)||(23502409-23502443)
chr5 (1-34)||(223175-223208)
chr5 (1-30)||(40297947-40297976)
chr5 (1-33)||(2710340-2710372)
chr5 (1-33)||(3223565-3223597)
chr5 (1-33)||(4125444-4125476)
chr5 (1-33)||(5088074-5088106)
chr5 (1-33)||(5088353-5088385)
chr5 (1-33)||(9071968-9072000)
chr5 (1-33)||(11480036-11480068)
chr5 (1-33)||(12049119-12049151)
chr5 (1-36)||(13356830-13356866)
chr5 (1-33)||(15526704-15526736)
chr5 (3-31)||(16329862-16329890)
chr5 (1-33)||(16521154-16521186)
chr5 (1-33)||(16666854-16666886)
chr5 (1-33)||(18266352-18266384)
chr5 (3-35)||(26323658-26323690)
chr5 (1-33)||(27264109-27264141)
chr5 (1-33)||(28394933-28394965)
chr5 (1-33)||(28620039-28620071)
chr5 (1-33)||(29401370-29401402)
chr5 (1-33)||(30894125-30894157)
chr5 (3-35)||(34169071-34169103)
chr5 (1-33)||(35306710-35306742)
chr5 (1-33)||(40297665-40297697)
chr5 (1-33)||(40768169-40768201)
chr5 (3-35)||(42739870-42739902)
chr5 (1-33)||(43586067-43586099)
[»] chr4 (48 HSPs)
chr4 (1-33)||(7705870-7705902)
chr4 (3-35)||(20466383-20466415)
chr4 (1-33)||(52114415-52114447)
chr4 (3-42)||(13019264-13019303)
chr4 (3-33)||(7119877-7119907)
chr4 (1-35)||(7666479-7666513)
chr4 (1-35)||(10045954-10045988)
chr4 (1-35)||(17262366-17262400)
chr4 (1-35)||(27247140-27247174)
chr4 (3-33)||(29432330-29432360)
chr4 (1-35)||(43821717-43821751)
chr4 (1-34)||(11159701-11159734)
chr4 (2-35)||(17266029-17266062)
chr4 (1-34)||(21536879-21536912)
chr4 (3-32)||(37289739-37289768)
chr4 (1-33)||(104200-104232)
chr4 (1-33)||(4902136-4902168)
chr4 (1-33)||(4902437-4902469)
chr4 (1-33)||(6386731-6386763)
chr4 (1-33)||(7119594-7119626)
chr4 (1-33)||(7396141-7396173)
chr4 (1-33)||(7666200-7666232)
chr4 (1-33)||(7705590-7705622)
chr4 (1-33)||(11529759-11529791)
chr4 (1-33)||(12641100-12641132)
chr4 (1-33)||(13021260-13021292)
chr4 (1-33)||(14578438-14578470)
chr4 (1-33)||(23315659-23315691)
chr4 (1-33)||(24415073-24415105)
chr4 (1-33)||(24415355-24415387)
chr4 (1-33)||(27246859-27246891)
chr4 (1-33)||(29548461-29548493)
chr4 (3-35)||(34363101-34363133)
chr4 (3-35)||(35364194-35364226)
chr4 (1-33)||(37289455-37289487)
chr4 (1-33)||(39136578-39136610)
chr4 (1-33)||(41205498-41205530)
chr4 (1-33)||(41205777-41205809)
chr4 (1-33)||(42672349-42672381)
chr4 (1-33)||(43821979-43822011)
chr4 (1-33)||(51537430-51537462)
chr4 (1-33)||(51696536-51696568)
chr4 (1-33)||(52045721-52045753)
chr4 (1-33)||(52045997-52046029)
chr4 (1-33)||(52310801-52310833)
chr4 (1-33)||(52311083-52311115)
chr4 (1-33)||(54215956-54215988)
chr4 (1-33)||(55586898-55586930)
[»] chr2 (26 HSPs)
chr2 (1-36)||(1375043-1375078)
chr2 (1-36)||(1466807-1466842)
chr2 (2-33)||(13732449-13732480)
chr2 (1-36)||(17798845-17798880)
chr2 (2-33)||(42445654-42445685)
chr2 (2-33)||(45395520-45395551)
chr2 (3-33)||(22093501-22093531)
chr2 (3-33)||(24858159-24858189)
chr2 (1-35)||(34850938-34850972)
chr2 (1-35)||(36987410-36987444)
chr2 (3-37)||(39245665-39245699)
chr2 (3-33)||(40324634-40324664)
chr2 (1-38)||(17096906-17096943)
chr2 (3-36)||(21552538-21552571)
chr2 (3-32)||(24894970-24894999)
chr2 (1-34)||(36987694-36987727)
chr2 (1-33)||(9715130-9715162)
chr2 (1-33)||(19256870-19256902)
chr2 (3-35)||(22194731-22194763)
chr2 (1-33)||(23000790-23000822)
chr2 (1-33)||(25429922-25429954)
chr2 (1-33)||(25430051-25430083)
chr2 (1-33)||(26717158-26717190)
chr2 (1-33)||(39620545-39620577)
chr2 (3-35)||(39642727-39642759)
chr2 (1-33)||(45127117-45127149)
[»] scaffold1067 (1 HSPs)
scaffold1067 (3-33)||(1355-1385)
[»] scaffold0121 (2 HSPs)
scaffold0121 (1-35)||(22293-22327)
scaffold0121 (1-35)||(22557-22591)
[»] chr6 (30 HSPs)
chr6 (3-33)||(5606296-5606326)
chr6 (1-35)||(26479324-26479358)
chr6 (1-39)||(29697124-29697162)
chr6 (1-42)||(1896889-1896930)
chr6 (3-36)||(3195995-3196028)
chr6 (1-34)||(6261380-6261413)
chr6 (1-34)||(13042689-13042722)
chr6 (2-35)||(23883370-23883403)
chr6 (2-35)||(34705658-34705691)
chr6 (3-35)||(1814974-1815006)
chr6 (1-33)||(4405522-4405554)
chr6 (1-33)||(6261658-6261690)
chr6 (1-33)||(7391485-7391517)
chr6 (1-33)||(9126656-9126688)
chr6 (1-33)||(10893889-10893921)
chr6 (3-35)||(10977656-10977688)
chr6 (1-33)||(11213464-11213496)
chr6 (1-33)||(11745998-11746030)
chr6 (1-33)||(13042408-13042440)
chr6 (1-33)||(15272998-15273030)
chr6 (1-33)||(20080118-20080150)
chr6 (1-33)||(23291256-23291288)
chr6 (1-33)||(23585259-23585291)
chr6 (1-33)||(25749955-25749987)
chr6 (1-33)||(26171488-26171520)
chr6 (1-33)||(26716652-26716684)
chr6 (1-33)||(27223590-27223622)
chr6 (3-35)||(28930747-28930779)
chr6 (1-33)||(31833547-31833579)
chr6 (1-33)||(31951482-31951514)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-34)||(16035-16068)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-30)||(139178-139207)
[»] scaffold1171 (1 HSPs)
scaffold1171 (1-33)||(819-851)
[»] scaffold0922 (1 HSPs)
scaffold0922 (1-33)||(114-146)
[»] scaffold0693 (1 HSPs)
scaffold0693 (1-33)||(4802-4834)
[»] scaffold0606 (1 HSPs)
scaffold0606 (1-33)||(6868-6900)
[»] scaffold0594 (2 HSPs)
scaffold0594 (1-33)||(5592-5624)
scaffold0594 (1-33)||(5874-5906)
[»] scaffold0474 (1 HSPs)
scaffold0474 (1-33)||(7721-7753)
[»] scaffold0370 (2 HSPs)
scaffold0370 (1-33)||(10909-10941)
scaffold0370 (1-33)||(16199-16231)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-33)||(29650-29682)
scaffold0122 (1-33)||(29932-29964)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-33)||(81583-81615)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-33)||(78990-79022)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-33)||(238905-238937)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-33)||(400704-400736)
scaffold0001 (1-33)||(400987-401019)


Alignment Details
Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 49476863 - 49476955
Alignment:
Q  147 aataataaatgttacattgaactttgaaagttataacagttttctc--tcttttagatgcaacaattgaaaaagacaaagagggagcaaatac 237  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  49476863 aataataaatgttacattaaactttgaaagttataacagttttctctctcttttagatgcaacaattgaaaaagacaaagagggagcaaatac 49476955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 49476777 - 49476859
Alignment:
Q  33 caattaacaactaataaattgtttaccttcaatacaattacttatcnnnnnnnnctatagtaactttaatcattccctttgta 115  Q
    |||||||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  49476777 caattaacaactaataaactgtttaccttcaatacaattacttatcttttttttctatagtaactttaatcattccctttgta 49476859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7858243 - 7858275
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  7858243 ggaaagatagggatccaaaagtgcaattaagcc 7858275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 38511689 - 38511657
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||||||||||||||||||||||||    
T  38511689 aaagatagggatccaaaagtgcaattaagccaa 38511657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 44184252 - 44184287
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  44184252 ggaaagataggggtccaaaagtgcaattaagccaat 44184287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 3212433 - 3212467
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  3212433 ggaaagataggggtccaaaagtgcaattaagccaa 3212467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 5577214 - 5577248
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  5577214 ggaaagataggggtccaaaagtgcaattaagccaa 5577248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 9630798 - 9630768
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  9630798 aaagatagggatccaaaagtgcaattaagcc 9630768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 14004117 - 14004147
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  14004117 aaagatagggatccaaaagtgcaattaagcc 14004147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 20982311 - 20982277
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaat 36  Q
    ||||||||||| |||||||||||||||||||||||    
T  20982311 gaaagataggggtccaaaagtgcaattaagccaat 20982277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 25053865 - 25053899
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  25053865 ggaaagataggggtccaaaagtgcaattaagccaa 25053899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 27857416 - 27857450
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  27857416 ggaaagataggggtccaaaagtgcaattaagccaa 27857450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 36373828 - 36373858
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  36373828 aaagatagggatccaaaagtgcaattaagcc 36373858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42230312 - 42230350
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaattaa 39  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  42230312 ggaaagataggggtccaaaagtgcaattaagcctattaa 42230350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 47530371 - 47530337
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  47530371 ggaaagataggggtccaaaagtgcaattaagccaa 47530337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 53192394 - 53192428
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  53192394 ggaaagataggggtccaaaagtgcaattaagccaa 53192428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22202516 - 22202483
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  22202516 ggaaagataggggtccaaaagtgcaattaagcca 22202483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28964435 - 28964472
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaatta 38  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  28964435 ggaaagataggggtccaaaagtgcaattaagcctatta 28964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 257717 - 257749
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  257717 ggaaagataggggtccaaaagtgcaattaagcc 257749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 2118997 - 2119029
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  2118997 aaagataggggtccaaaagtgcaattaagccaa 2119029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2239511 - 2239543
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  2239511 ggaaagataggggtccaaaagtgcaattaagcc 2239543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8313981 - 8313949
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  8313981 ggaaagataggggtccaaaagtgcaattaagcc 8313949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10864147 - 10864115
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  10864147 ggaaagataggggtccaaaagtgcaattaagcc 10864115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10864400 - 10864432
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  10864400 ggaaagataggggtccaaaagtgcaattaagcc 10864432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12881267 - 12881235
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  12881267 ggaaagataggggtccaaaagtgcaattaagcc 12881235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12881496 - 12881528
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  12881496 ggaaagataggggtccaaaagtgcaattaagcc 12881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14904474 - 14904442
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  14904474 ggaaagataggggtccaaaagtgcaattaagcc 14904442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 17483591 - 17483559
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  17483591 aaagataggggtccaaaagtgcaattaagccaa 17483559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 17483841 - 17483873
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  17483841 aaagataggggtccaaaagtgcaattaagccaa 17483873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 17916364 - 17916396
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  17916364 ggaaagataggggtccaaaagtgcaattaagcc 17916396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19391670 - 19391638
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  19391670 ggaaagataggggtccaaaagtgcaattaagcc 19391638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19391984 - 19392016
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  19391984 ggaaagataggggtccaaaagtgcaattaagcc 19392016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19914753 - 19914785
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  19914753 ggaaagataggggtccaaaagtgcaattaagcc 19914785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20982540 - 20982572
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  20982540 ggaaagataggggtccaaaagtgcaattaagcc 20982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21841759 - 21841727
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  21841759 ggaaagataggggtccaaaagtgcaattaagcc 21841727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26494717 - 26494685
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  26494717 ggaaagataggggtccaaaagtgcaattaagcc 26494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27748276 - 27748244
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27748276 ggaaagataggggtccaaaagtgcaattaagcc 27748244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27748524 - 27748556
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27748524 ggaaagataggggtccaaaagtgcaattaagcc 27748556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27766550 - 27766518
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27766550 ggaaagataggggtccaaaagtgcaattaagcc 27766518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27766798 - 27766830
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27766798 ggaaagataggggtccaaaagtgcaattaagcc 27766830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 27984169 - 27984137
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  27984169 aaagataggggtccaaaagtgcaattaagccaa 27984137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28964185 - 28964153
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  28964185 ggaaagataggggtccaaaagtgcaattaagcc 28964153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 33622149 - 33622177
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaag 31  Q
    |||||||||||||||||||||||||||||    
T  33622149 aaagatagggatccaaaagtgcaattaag 33622177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 37182036 - 37182004
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  37182036 ggaaagataggggtccaaaagtgcaattaagcc 37182004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41281877 - 41281845
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  41281877 ggaaagataggggtccaaaagtgcaattaagcc 41281845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 41282130 - 41282162
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  41282130 aaagataggggtccaaaagtgcaattaagccaa 41282162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42465723 - 42465691
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  42465723 ggaaagataggggtccaaaagtgcaattaagcc 42465691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44177320 - 44177288
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  44177320 ggaaagataggggtccaaaagtgcaattaagcc 44177288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44184004 - 44183972
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  44184004 ggaaagataggggtccaaaagtgcaattaagcc 44183972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 44895929 - 44895961
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  44895929 ggaaagataggggtccaaaagtgcaattaagcc 44895961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45743931 - 45743899
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  45743931 ggaaagataggggtccaaaagtgcaattaagcc 45743899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45744180 - 45744212
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  45744180 ggaaagatagagatccaaaagtgcaattaagcc 45744212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 45760516 - 45760548
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  45760516 aaagataggggtccaaaagtgcaattaagccaa 45760548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 47423409 - 47423441
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  47423409 ggaaagataggggtccaaaagtgcaattaagcc 47423441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 47530621 - 47530653
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  47530621 ggaaagataggggtccaaaagtgcaattaagcc 47530653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 51213337 - 51213305
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  51213337 aaagataggggtccaaaagtgcaattaagccaa 51213305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 52916891 - 52916859
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  52916891 ggaaagataggggtccaaaagtgcaattaagcc 52916859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 53192146 - 53192114
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  53192146 ggaaagataggggtccaaaagtgcaattaagcc 53192114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 53532087 - 53532119
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  53532087 ggaaagataggggtccaaaagtgcaattaagcc 53532119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 21098 - 21063
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  21098 ggaaagatagggatccaaaagtgcaattaagccaat 21063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 21328 - 21362
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  21328 ggaaagataggggtccaaaagtgcaattaagccaa 21362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 866425 - 866459
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||||||||||||||||||||||||||    
T  866425 ggaaagatagggatccaaaagtgcaattaagccaa 866459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 18590113 - 18590146
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaat 36  Q
    ||||||||||||||||||||||||||||||||||    
T  18590113 aaagatagggatccaaaagtgcaattaagccaat 18590146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 32038121 - 32038154
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||||||||||||||||||||||||||    
T  32038121 gaaagatagggatccaaaagtgcaattaagccaa 32038154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 43677135 - 43677103
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  43677135 ggaaagatagggatccaaaagtgcaattaagcc 43677103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8029238 - 8029269
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagc 32  Q
    ||||||||||||||||||||||||||||||||    
T  8029238 ggaaagatagggatccaaaagtgcaattaagc 8029269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 23793063 - 23793098
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  23793063 ggaaagataggggtccaaaagtgcaattaagccaat 23793098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 26434971 - 26435006
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  26434971 ggaaagataggggtccaaaagtgcaattaagccaat 26435006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 3264032 - 3263998
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  3264032 ggaaagataggggtccaaaagtgcaattaagccaa 3263998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 4243410 - 4243440
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  4243410 aaagatagggatccaaaagtgcaattaagcc 4243440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 6183014 - 6182980
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  6183014 ggaaagataggggtccaaaagtgcaattaagccaa 6182980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 6809098 - 6809068
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  6809098 aaagatagggatccaaaagtgcaattaagcc 6809068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 8028990 - 8028960
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  8028990 aaagatagggatccaaaagtgcaattaagcc 8028960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 9058198 - 9058164
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  9058198 ggaaagataggggtccaaaagtgcaattaagccaa 9058164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 12071926 - 12071960
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  12071926 ggaaagatagagatccaaaagtgcaattaagccaa 12071960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 32341527 - 32341493
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  32341527 ggaaagataggggtccaaaagtgcaattaagccaa 32341493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 42407166 - 42407200
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  42407166 ggaaagataggggtccaaaagtgcaattaagccaa 42407200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 2371208 - 2371175
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||| ||||||||||||||||||||||    
T  2371208 gaaagataggggtccaaaagtgcaattaagccaa 2371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 5225633 - 5225662
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaa 30  Q
    ||||||||||||||||||||||||||||||    
T  5225633 ggaaagatagggatccaaaagtgcaattaa 5225662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 13098061 - 13098032
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagc 32  Q
    ||||||||||||||||||||||||||||||    
T  13098061 aaagatagggatccaaaagtgcaattaagc 13098032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 22075634 - 22075667
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||| |||||||||||||||||||||||    
T  22075634 aaagataggggtccaaaagtgcaattaagccaat 22075667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 30294901 - 30294868
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||| ||||||||||||||||||||||    
T  30294901 gaaagataggggtccaaaagtgcaattaagccaa 30294868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 922444 - 922476
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  922444 ggaaagataggggtccaaaagtgcaattaagcc 922476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 2371460 - 2371492
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  2371460 aaagataggggtccaaaagtgcaattaagccaa 2371492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 6183265 - 6183297
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  6183265 aaagataggggtccaaaagtgcaattaagccaa 6183297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 6491699 - 6491731
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  6491699 aaagataggggtccaaaagtgcaattaagccaa 6491731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8774330 - 8774298
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  8774330 ggaaagataggggtccaaaagtgcaattaagcc 8774298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11018433 - 11018401
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11018433 ggaaagataggggtccaaaagtgcaattaagcc 11018401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11051928 - 11051896
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11051928 ggaaagataggggtccaaaagtgcaattaagcc 11051896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11052178 - 11052210
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11052178 ggaaagataggggtccaaaagtgcaattaagcc 11052210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11204539 - 11204507
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11204539 ggaaagataggggtccaaaagtgcaattaagcc 11204507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12690053 - 12690021
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  12690053 ggaaagataggggtccaaaagtgcaattaagcc 12690021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 13791858 - 13791890
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  13791858 aaagataggggtccaaaagtgcaattaagccaa 13791890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15161579 - 15161611
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  15161579 ggaaagataggggtccaaaagtgcaattaagcc 15161611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20017658 - 20017690
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  20017658 ggaaagataggggtccaaaagtgcaattaagcc 20017690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20596144 - 20596176
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  20596144 ggaaagataggggtccaaaagtgcaattaagcc 20596176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23342242 - 23342274
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  23342242 ggaaagataggggtccaaaagtgcaattaagcc 23342274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23356725 - 23356693
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  23356725 ggaaagataggggtccaaaagtgcaattaagcc 23356693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26861306 - 26861274
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  26861306 ggaaagataggggtccaaaagtgcaattaagcc 26861274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27396807 - 27396839
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27396807 ggaaagataggggtccaaaagtgcaattaagcc 27396839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 28503419 - 28503451
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  28503419 aaagataggggtccaaaagtgcaattaagccaa 28503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29794725 - 29794693
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  29794725 ggaaagataggggtccaaaagtgcaattaagcc 29794693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30288208 - 30288176
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  30288208 ggaaagataggggtccaaaagtgcaattaagcc 30288176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31797096 - 31797064
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  31797096 ggaaagataggggtccaaaagtgcaattaagcc 31797064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 38622686 - 38622718
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  38622686 aaagataggggtccaaaagtgcaattaagccaa 38622718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 41585315 - 41585271
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaattaacaactaat 47  Q
    |||||||| ||||||||| ||||||||||||||| || |||||||    
T  41585315 aaagatagagatccaaaaatgcaattaagccaataaaaaactaat 41585271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 43914610 - 43914578
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  43914610 ggaaagataggggtccaaaagtgcaattaagcc 43914578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45012664 - 45012632
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  45012664 ggaaagataggggtccaaaagtgcaattaagcc 45012632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45664421 - 45664453
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  45664421 ggaaagataggggtccaaaagtgcaattaagcc 45664453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 45680121 - 45680093
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaag 31  Q
    |||||||||||||||||||||||||||||    
T  45680121 aaagatagggatccaaaagtgcaattaag 45680093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45885230 - 45885262
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  45885230 ggaaagataggggtccaaaagtgcaattaagcc 45885262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 52149797 - 52149829
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  52149797 aaagataggggtccaaaagtgcaattaagccaa 52149829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 52233463 - 52233431
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  52233463 ggaaagataggggtccaaaagtgcaattaagcc 52233431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 28596212 - 28596245
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||||||||||||||||||||||||||    
T  28596212 gaaagatagggatccaaaagtgcaattaagccaa 28596245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4132786 - 4132754
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  4132786 ggaaagatagggatccaaaagtgcaattaagcc 4132754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 40918655 - 40918691
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaatt 37  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40918655 ggaaagataggggtccaaaagtgcaattaagccaatt 40918691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 414699 - 414664
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  414699 ggaaagataggggtccaaaagtgcaattaagccaat 414664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 2321798 - 2321833
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  2321798 ggaaagataggggtccaaaagtgcaattaagccaat 2321833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 20814022 - 20814057
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  20814022 ggaaagataggggtccaaaagtgcaattaagccaat 20814057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 27872741 - 27872710
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagcc 33  Q
    ||||||||||||||||||||||||||||||||    
T  27872741 gaaagatagggatccaaaagtgcaattaagcc 27872710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 41554869 - 41554900
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagcc 33  Q
    ||||||||||||||||||||||||||||||||    
T  41554869 gaaagatagggatccaaaagtgcaattaagcc 41554900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 42524741 - 42524710
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagcc 33  Q
    ||||||||||||||||||||||||||||||||    
T  42524741 gaaagatagggatccaaaagtgcaattaagcc 42524710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 995023 - 994993
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  995023 aaagatagggatccaaaagtgcaattaagcc 994993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 4167483 - 4167517
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaatt 37  Q
    |||||||||| ||||||||||||||||||||||||    
T  4167483 aaagataggggtccaaaagtgcaattaagccaatt 4167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 6014701 - 6014731
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  6014701 aaagatagggatccaaaagtgcaattaagcc 6014731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7151123 - 7151157
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  7151123 ggaaagataggggtccaaaagtgcaattaagccaa 7151157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 20095968 - 20096002
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  20095968 ggaaagataggggtccaaaagtgcaattaagccaa 20096002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 20283956 - 20283990
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  20283956 ggaaagataggggtccaaaagtgcaattaagccaa 20283990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 21070584 - 21070618
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  21070584 ggaaagataggggtccaaaagtgcaattaagccaa 21070618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39515590 - 39515556
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  39515590 ggaaagataggggtccaaaagtgcaattaagccaa 39515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 41625490 - 41625460
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  41625490 aaagatagggatccaaaagtgcaattaagcc 41625460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5734466 - 5734499
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  5734466 ggaaagataggggtccaaaagtgcaattaagcca 5734499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7318916 - 7318949
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  7318916 ggaaagataggggtccaaaagtgcaattaagcca 7318949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 18531115 - 18531148
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||| ||||||||||||||||||||||    
T  18531115 gaaagataggggtccaaaagtgcaattaagccaa 18531148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 29233574 - 29233545
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaa 30  Q
    ||||||||||||||||||||||||||||||    
T  29233574 ggaaagatagggatccaaaagtgcaattaa 29233545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 31190674 - 31190641
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||| ||||||||||||||||||||||    
T  31190674 gaaagataggggtccaaaagtgcaattaagccaa 31190641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 35409745 - 35409716
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaa 30  Q
    ||||||||||||||||||||||||||||||    
T  35409745 ggaaagatagggatccaaaagtgcaattaa 35409716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39626249 - 39626282
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  39626249 ggaaagataggggtccaaaagtgcaattaagcca 39626282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39635799 - 39635832
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  39635799 ggaaagataggggtccaaaagtgcaattaagcca 39635832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1657666 - 1657698
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  1657666 ggaaagataggggtccaaaagtgcaattaagcc 1657698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 4107131 - 4107163
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  4107131 aaagataggggtccaaaagtgcaattaagccaa 4107163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6107149 - 6107117
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  6107149 ggaaagataggggtccaaaagtgcaattaagcc 6107117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 6641881 - 6641913
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  6641881 aaagataggggtccaaaagtgcaattaagccaa 6641913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6655559 - 6655591
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||| ||||||||||||    
T  6655559 ggaaagatagggatccaaaaatgcaattaagcc 6655591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6735961 - 6735993
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||| ||||||||||||    
T  6735961 ggaaagatagggatccaaaaatgcaattaagcc 6735993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8870291 - 8870259
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  8870291 ggaaagataggggtccaaaagtgcaattaagcc 8870259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14032068 - 14032036
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  14032068 ggaaagataggggtccaaaagtgcaattaagcc 14032036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20095718 - 20095686
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  20095718 ggaaagataggggtccaaaagtgcaattaagcc 20095686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 23233811 - 23233779
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  23233811 aaagataggggtccaaaagtgcaattaagccaa 23233779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27822907 - 27822875
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27822907 ggaaagataggggtccaaaagtgcaattaagcc 27822875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30359123 - 30359155
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  30359123 ggaaagataggggtccaaaagtgcaattaagcc 30359155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30845841 - 30845873
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  30845841 ggaaagataggggtccaaaagtgcaattaagcc 30845873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32332172 - 32332140
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  32332172 ggaaagataggggtccaaaagtgcaattaagcc 32332140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36226696 - 36226728
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  36226696 ggaaagataggggtccaaaagtgcaattaagcc 36226728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37205822 - 37205854
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  37205822 ggaaagataggggtccaaaagtgcaattaagcc 37205854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38593219 - 38593187
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  38593219 ggaaagataggggtccaaaagtgcaattaagcc 38593187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39616832 - 39616864
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  39616832 ggaaagataggggtccaaaagtgcaattaagcc 39616864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41693333 - 41693365
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    ||||||||| |||||||||||||||||||||||    
T  41693333 ggaaagataaggatccaaaagtgcaattaagcc 41693365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 42267739 - 42267771
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  42267739 ggaaagataggggtccaaaagtgcaattaagcc 42267771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 42642369 - 42642401
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  42642369 ggaaagataggggtccaaaagtgcaattaagcc 42642401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 42906655 - 42906687
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  42906655 ggaaagataggggtccaaaagtgcaattaagcc 42906687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30699055 - 30699023
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  30699055 ggaaagatagggatccaaaagtgcaattaagcc 30699023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 388184 - 388219
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaatta 38  Q
    |||||||||| |||||||||||||||||||||||||    
T  388184 aaagataggggtccaaaagtgcaattaagccaatta 388219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 10385730 - 10385764
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  10385730 ggaaagataggggtccaaaagtgcaattaagccaa 10385764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 19233600 - 19233634
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  19233600 ggaaagataggggtccaaaagtgcaattaagccaa 19233634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 35121443 - 35121413
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  35121443 aaagatagggatccaaaagtgcaattaagcc 35121413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39976761 - 39976727
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  39976761 ggaaagataggggtccaaaagtgcaattaagccaa 39976727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 18798291 - 18798320
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaa 30  Q
    ||||||||||||||||||||||||||||||    
T  18798291 ggaaagatagggatccaaaagtgcaattaa 18798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 25036316 - 25036345
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagc 32  Q
    ||||||||||||||||||||||||||||||    
T  25036316 aaagatagggatccaaaagtgcaattaagc 25036345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 38445435 - 38445402
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||||||||||||||||||||| ||||    
T  38445435 gaaagatagggatccaaaagtgcaattaaaccaa 38445402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3235397 - 3235429
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  3235397 ggaaagataggggtccaaaagtgcaattaagcc 3235429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5096820 - 5096788
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  5096820 ggaaagataggggtccaaaagtgcaattaagcc 5096788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7974672 - 7974704
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  7974672 ggaaagataggggtccaaaagtgcaattaagcc 7974704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 10319176 - 10319208
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  10319176 aaagataggggtccaaaagtgcaattaagccaa 10319208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11900082 - 11900050
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11900082 ggaaagataggggtccaaaagtgcaattaagcc 11900050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11900331 - 11900363
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11900331 ggaaagataggggtccaaaagtgcaattaagcc 11900363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16879519 - 16879551
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  16879519 ggaaagataggggtccaaaagtgcaattaagcc 16879551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18852774 - 18852806
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  18852774 ggaaagataggggtccaaaagtgcaattaagcc 18852806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19194192 - 19194160
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  19194192 ggaaagataggggtccaaaagtgcaattaagcc 19194160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19233372 - 19233340
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  19233372 ggaaagatagggttccaaaagtgcaattaagcc 19233340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21782635 - 21782603
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  21782635 ggaaagataggggtccaaaagtgcaattaagcc 21782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25683956 - 25683988
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  25683956 ggaaagataggggtccaaaagtgcaattaagcc 25683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25983021 - 25982989
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  25983021 ggaaagataggggtccaaaagtgcaattaagcc 25982989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27432522 - 27432490
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27432522 ggaaagataggggtccaaaagtgcaattaagcc 27432490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 30699307 - 30699339
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  30699307 aaagataggggtccaaaagtgcaattaagccaa 30699339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34288080 - 34288048
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  34288080 ggaaagataggggtccaaaagtgcaattaagcc 34288048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34404475 - 34404439
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaatt 37  Q
    |||||||||||| || |||||||||||||||||||||    
T  34404475 ggaaagataggggtctaaaagtgcaattaagccaatt 34404439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34533246 - 34533214
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  34533246 ggaaagataggggtccaaaagtgcaattaagcc 34533214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35437495 - 35437527
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  35437495 ggaaagataggggtccaaaagtgcaattaagcc 35437527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35924172 - 35924204
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  35924172 ggaaagataggggtccaaaagtgcaattaagcc 35924204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36376092 - 36376060
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  36376092 ggaaagataggggtccaaaagtgcaattaagcc 36376060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 37452332 - 37452368
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaattaa 39  Q
    |||||||||| |||||||||||||||||||| |||||    
T  37452332 aaagataggggtccaaaagtgcaattaagcctattaa 37452368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38053178 - 38053146
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  38053178 ggaaagataggggtccaaaagtgcaattaagcc 38053146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 38445689 - 38445721
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  38445689 aaagataggggtccaaaagtgcaattaagccaa 38445721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38879431 - 38879463
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  38879431 ggaaagataggggtccaaaagtgcaattaagcc 38879463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39753904 - 39753872
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  39753904 ggaaagataggggtccaaaagtgcaattaagcc 39753872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42997088 - 42997056
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  42997088 ggaaagataggggtccaaaagtgcaattaagcc 42997056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 43632373 - 43632341
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  43632373 ggaaagataggggtccaaaagtgcaattaagcc 43632341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44214691 - 44214659
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  44214691 ggaaagataggggtccaaaagtgcaattaagcc 44214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 46622586 - 46622554
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  46622586 ggaaagataggggtccaaaagtgcaattaagcc 46622554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 39252 - 39284
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||||||||||||||||||||||||    
T  39252 aaagatagggatccaaaagtgcaattaagccaa 39284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41032467 - 41032499
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  41032467 ggaaagatagggatccaaaagtgcaattaagcc 41032499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 8339989 - 8339955
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaatt 37  Q
    |||||||||| ||||||||||||||||||||||||    
T  8339989 aaagataggggtccaaaagtgcaattaagccaatt 8339955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 16666103 - 16666073
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  16666103 aaagatagggatccaaaagtgcaattaagcc 16666073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 22627266 - 22627296
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  22627266 aaagatagggatccaaaagtgcaattaagcc 22627296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 23502409 - 23502443
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  23502409 ggaaagataggggtccaaaagtgcaattaagccaa 23502443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 223175 - 223208
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  223175 ggaaagataggggtccaaaagtgcaattaagcca 223208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 40297947 - 40297976
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaa 30  Q
    ||||||||||||||||||||||||||||||    
T  40297947 ggaaagatagggatccaaaagtgcaattaa 40297976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2710372 - 2710340
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  2710372 ggaaagataggggtccaaaagtgcaattaagcc 2710340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3223565 - 3223597
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  3223565 ggaaagataggggtccaaaagtgcaattaagcc 3223597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4125476 - 4125444
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  4125476 ggaaagataggggtccaaaagtgcaattaagcc 4125444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5088106 - 5088074
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  5088106 ggaaagataggggtccaaaagtgcaattaagcc 5088074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5088353 - 5088385
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  5088353 ggaaagataggggtccaaaagtgcaattaagcc 5088385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 9072000 - 9071968
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  9072000 ggaaagataggggtccaaaagtgcaattaagcc 9071968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11480068 - 11480036
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11480068 ggaaagataggggtccaaaagtgcaattaagcc 11480036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12049151 - 12049119
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  12049151 ggaaagataggggtccaaaagtgcaattaagcc 12049119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 13356830 - 13356866
Alignment:
Q  1 ggaaagataggg-atccaaaagtgcaattaagccaat 36  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13356830 ggaaagataggggatccaaaagtgcaattaagccaat 13356866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15526736 - 15526704
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  15526736 ggaaagataggggtccaaaagtgcaattaagcc 15526704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 16329862 - 16329890
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaag 31  Q
    |||||||||||||||||||||||||||||    
T  16329862 aaagatagggatccaaaagtgcaattaag 16329890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16521186 - 16521154
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  16521186 ggaaagataggggtccaaaagtgcaattaagcc 16521154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16666854 - 16666886
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  16666854 ggaaagataggggtccaaaagtgcaattaagcc 16666886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18266384 - 18266352
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  18266384 ggaaagataggggtccaaaagtgcaattaagcc 18266352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 26323658 - 26323690
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  26323658 aaagataggggtccaaaagtgcaattaagccaa 26323690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27264141 - 27264109
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27264141 ggaaagataggggtccaaaagtgcaattaagcc 27264109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28394965 - 28394933
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  28394965 ggaaagataggggtccaaaagtgcaattaagcc 28394933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28620071 - 28620039
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  28620071 ggaaagataggggtccaaaagtgcaattaagcc 28620039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 29401370 - 29401402
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  29401370 ggaaagataggggtccaaaagtgcaattaagcc 29401402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30894157 - 30894125
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  30894157 ggaaagataggggtccaaaagtgcaattaagcc 30894125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 34169071 - 34169103
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  34169071 aaagataggggtccaaaagtgcaattaagccaa 34169103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35306742 - 35306710
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  35306742 ggaaagataggggtccaaaagtgcaattaagcc 35306710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 40297697 - 40297665
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  40297697 ggaaagataggggtccaaaagtgcaattaagcc 40297665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40768169 - 40768201
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  40768169 ggaaagataggggtccaaaagtgcaattaagcc 40768201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 42739870 - 42739902
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  42739870 aaagataggggtccaaaagtgcaattaagccaa 42739902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43586067 - 43586099
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  43586067 ggaaagataggggtccaaaagtgcaattaagcc 43586099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7705870 - 7705902
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  7705870 ggaaagatagggatccaaaagtgcaattaagcc 7705902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 20466415 - 20466383
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||||||||||||||||||||||||    
T  20466415 aaagatagggatccaaaagtgcaattaagccaa 20466383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 52114415 - 52114447
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  52114415 ggaaagatagggatccaaaagtgcaattaagcc 52114447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 13019303 - 13019264
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaattaacaa 42  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  13019303 aaagataggggtccaaaagtgcaattaagccaataaacaa 13019264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 7119877 - 7119907
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  7119877 aaagatagggatccaaaagtgcaattaagcc 7119907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7666479 - 7666513
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  7666479 ggaaagataggggtccaaaagtgcaattaagccaa 7666513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 10045988 - 10045954
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  10045988 ggaaagataggggtccaaaagtgcaattaagccaa 10045954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 17262366 - 17262400
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  17262366 ggaaagataggggtccaaaagtgcaattaagccaa 17262400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 27247140 - 27247174
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  27247140 ggaaagataggggtccaaaagtgcaattaagccaa 27247174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 29432330 - 29432360
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  29432330 aaagatagggatccaaaagtgcaattaagcc 29432360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 43821751 - 43821717
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  43821751 ggaaagataggggtccaaaagtgcaattaagccaa 43821717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11159701 - 11159734
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  11159701 ggaaagataggggtccaaaagtgcaattaagcca 11159734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 17266029 - 17266062
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||| ||||||||||||||||||||||    
T  17266029 gaaagataggggtccaaaagtgcaattaagccaa 17266062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21536912 - 21536879
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  21536912 ggaaagataggggtccaaaagtgcaattaagcca 21536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 37289739 - 37289768
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagc 32  Q
    ||||||||||||||||||||||||||||||    
T  37289739 aaagatagggatccaaaagtgcaattaagc 37289768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 104232 - 104200
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  104232 ggaaagataggggtccaaaagtgcaattaagcc 104200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4902168 - 4902136
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  4902168 ggaaagataggggtccaaaagtgcaattaagcc 4902136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4902437 - 4902469
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  4902437 ggaaagataggggtccaaaagtgcaattaagcc 4902469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6386763 - 6386731
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  6386763 ggaaagataggggtccaaaagtgcaattaagcc 6386731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7119626 - 7119594
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||| ||||||||||    
T  7119626 ggaaagatagggatccaaaagtacaattaagcc 7119594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7396173 - 7396141
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  7396173 ggaaagataggggtccaaaagtgcaattaagcc 7396141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7666232 - 7666200
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  7666232 ggaaagataggggtccaaaagtgcaattaagcc 7666200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7705622 - 7705590
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  7705622 ggaaagataggggtccaaaagtgcaattaagcc 7705590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11529791 - 11529759
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11529791 ggaaagataggggtccaaaagtgcaattaagcc 11529759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12641100 - 12641132
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  12641100 ggaaagataggggtccaaaagtgcaattaagcc 12641132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 13021260 - 13021292
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  13021260 ggaaagataggggtccaaaagtgcaattaagcc 13021292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14578470 - 14578438
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  14578470 ggaaagataggggtccaaaagtgcaattaagcc 14578438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23315659 - 23315691
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  23315659 ggaaagataggggtccaaaagtgcaattaagcc 23315691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24415105 - 24415073
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  24415105 ggaaagataggggtccaaaagtgcaattaagcc 24415073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24415355 - 24415387
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  24415355 ggaaagataggggtccaaaagtgcaattaagcc 24415387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27246891 - 27246859
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27246891 ggaaagataggggtccaaaagtgcaattaagcc 27246859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 29548461 - 29548493
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  29548461 ggaaagataggggtccaaaagtgcaattaagcc 29548493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 34363101 - 34363133
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  34363101 aaagataggggtccaaaagtgcaattaagccaa 34363133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 35364226 - 35364194
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  35364226 aaagataggggtccaaaagtgcaattaagccaa 35364194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 37289487 - 37289455
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  37289487 ggaaagataggggtccaaaagtgcaattaagcc 37289455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39136578 - 39136610
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  39136578 ggaaagataggggtccaaaagtgcaattaagcc 39136610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41205530 - 41205498
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  41205530 ggaaagataggggtccaaaagtgcaattaagcc 41205498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41205777 - 41205809
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  41205777 ggaaagataggggtccaaaagtgcaattaagcc 41205809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 42672349 - 42672381
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  42672349 ggaaagataggggtccaaaagtgcaattaagcc 42672381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43821979 - 43822011
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  43821979 ggaaagataggggtccaaaagtgcaattaagcc 43822011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 51537462 - 51537430
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  51537462 ggaaagataggggtccaaaagtgcaattaagcc 51537430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 51696568 - 51696536
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  51696568 ggaaagataggggtccaaaagtgcaattaagcc 51696536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 52045753 - 52045721
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  52045753 ggaaagataggggtccaaaagtgcaattaagcc 52045721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 52045997 - 52046029
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  52045997 ggaaagataggggtccaaaagtgcaattaagcc 52046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 52310833 - 52310801
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  52310833 ggaaagataggggtccaaaagtgcaattaagcc 52310801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 52311083 - 52311115
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  52311083 ggaaagataggggtccaaaagtgcaattaagcc 52311115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 54215988 - 54215956
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  54215988 ggaaagataggggtccaaaagtgcaattaagcc 54215956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 55586898 - 55586930
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  55586898 ggaaagataggggtccaaaagtgcaattaagcc 55586930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000006; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 1375078 - 1375043
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  1375078 ggaaagataggggtccaaaagtgcaattaagccaat 1375043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 1466842 - 1466807
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  1466842 ggaaagataggggtccaaaagtgcaattaagccaat 1466807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 13732449 - 13732480
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagcc 33  Q
    ||||||||||||||||||||||||||||||||    
T  13732449 gaaagatagggatccaaaagtgcaattaagcc 13732480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 17798880 - 17798845
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  17798880 ggaaagataggggtccaaaagtgcaattaagccaat 17798845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 42445654 - 42445685
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagcc 33  Q
    ||||||||||||||||||||||||||||||||    
T  42445654 gaaagatagggatccaaaagtgcaattaagcc 42445685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 45395520 - 45395551
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagcc 33  Q
    ||||||||||||||||||||||||||||||||    
T  45395520 gaaagatagggatccaaaagtgcaattaagcc 45395551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 22093501 - 22093531
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  22093501 aaagatagggatccaaaagtgcaattaagcc 22093531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 24858159 - 24858189
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  24858159 aaagatagggatccaaaagtgcaattaagcc 24858189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 34850938 - 34850972
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  34850938 ggaaagataggggtccaaaagtgcaattaagccaa 34850972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 36987444 - 36987410
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  36987444 ggaaagataggggtccaaaagtgcaattaagccaa 36987410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 39245699 - 39245665
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaatt 37  Q
    ||||||| |||||||||||||||||||||||||||    
T  39245699 aaagatatggatccaaaagtgcaattaagccaatt 39245665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 40324664 - 40324634
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  40324664 aaagatagggatccaaaagtgcaattaagcc 40324634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17096943 - 17096906
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaatta 38  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  17096943 ggaaagttagggatccaaaagtgcaattaagcctatta 17096906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 21552571 - 21552538
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaat 36  Q
    |||||||||| |||||||||||||||||||||||    
T  21552571 aaagataggggtccaaaagtgcaattaagccaat 21552538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 24894999 - 24894970
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagc 32  Q
    ||||||||||||||||||||||||||||||    
T  24894999 aaagatagggatccaaaagtgcaattaagc 24894970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36987694 - 36987727
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  36987694 ggaaagataggggtccaaaagtgcaattaagcca 36987727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9715130 - 9715162
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  9715130 ggaaagataggggtccaaaagtgcaattaagcc 9715162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19256870 - 19256902
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  19256870 ggaaagataggggtccaaaagtgcaattaagcc 19256902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 22194731 - 22194763
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  22194731 aaagataggggtccaaaagtgcaattaagccaa 22194763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23000790 - 23000822
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  23000790 ggaaagataggggtccaaaagtgcaattaagcc 23000822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25429954 - 25429922
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  25429954 ggaaagataggggtccaaaagtgcaattaagcc 25429922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25430051 - 25430083
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  25430051 ggaaagataggggtccaaaagtgcaattaagcc 25430083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26717190 - 26717158
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  26717190 ggaaagataggggtccaaaagtgcaattaagcc 26717158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39620577 - 39620545
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    ||||||||||||| |||||||||||||||||||    
T  39620577 ggaaagatagggacccaaaagtgcaattaagcc 39620545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 39642759 - 39642727
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  39642759 aaagataggggtccaaaagtgcaattaagccaa 39642727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45127117 - 45127149
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  45127117 ggaaagataggggtccaaaagtgcaattaagcc 45127149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1067 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1067
Description:

Target: scaffold1067; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 1385 - 1355
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  1385 aaagatagggatccaaaagtgcaattaagcc 1355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 22327 - 22293
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  22327 ggaaagataggggtccaaaagtgcaattaagccaa 22293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 22557 - 22591
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  22557 ggaaagataggggtccaaaagtgcaattaagccaa 22591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 5606326 - 5606296
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||||||||||||||||||||||    
T  5606326 aaagatagggatccaaaagtgcaattaagcc 5606296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 26479324 - 26479358
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||| |||||||||||||||||||||||||||||    
T  26479324 ggaaaaatagggatccaaaagtgcaattaagccaa 26479358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29697124 - 29697162
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaattaa 39  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  29697124 ggaaagataggggtccaaaagtgcaattaagcctattaa 29697162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1896930 - 1896889
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagccaattaacaa 42  Q
    |||||||||||| ||||||||||||||||||||  |||||||    
T  1896930 ggaaagataggggtccaaaagtgcaattaagccttttaacaa 1896889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 3195995 - 3196028
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaat 36  Q
    ||||||| ||||||||||||||||||||||||||    
T  3195995 aaagataaggatccaaaagtgcaattaagccaat 3196028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6261413 - 6261380
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  6261413 ggaaagataggggtccaaaagtgcaattaagcca 6261380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13042689 - 13042722
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  13042689 ggaaagataggggtccaaaagtgcaattaagcca 13042722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 23883370 - 23883403
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||| ||||||||||||||||||||||    
T  23883370 gaaagataggggtccaaaagtgcaattaagccaa 23883403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 34705658 - 34705691
Alignment:
Q  2 gaaagatagggatccaaaagtgcaattaagccaa 35  Q
    ||||||||||| ||||||||||||||||||||||    
T  34705658 gaaagataggggtccaaaagtgcaattaagccaa 34705691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 1815006 - 1814974
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  1815006 aaagataggggtccaaaagtgcaattaagccaa 1814974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4405522 - 4405554
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  4405522 ggaaagataggggtccaaaagtgcaattaagcc 4405554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6261658 - 6261690
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  6261658 ggaaagataggggtccaaaagtgcaattaagcc 6261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7391517 - 7391485
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  7391517 ggaaagataggggtccaaaagtgcaattaagcc 7391485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9126656 - 9126688
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  9126656 ggaaagataggggtccaaaagtgcaattaagcc 9126688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10893921 - 10893889
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  10893921 ggaaagataggggtccaaaagtgcaattaagcc 10893889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 10977688 - 10977656
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  10977688 aaagataggggtccaaaagtgcaattaagccaa 10977656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11213464 - 11213496
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11213464 ggaaagataggggtccaaaagtgcaattaagcc 11213496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11746030 - 11745998
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11746030 ggaaagataggggtccaaaagtgcaattaagcc 11745998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13042440 - 13042408
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  13042440 ggaaagataggggtccaaaagtgcaattaagcc 13042408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15273030 - 15272998
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  15273030 ggaaagataggggtccaaaagtgcaattaagcc 15272998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20080150 - 20080118
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  20080150 ggaaagataggggtccaaaagtgcaattaagcc 20080118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23291288 - 23291256
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  23291288 ggaaagataggggtccaaaagtgcaattaagcc 23291256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23585259 - 23585291
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  23585259 ggaaagataggggtccaaaagtgcaattaagcc 23585291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25749987 - 25749955
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  25749987 ggaaagataggggtccaaaagtgcaattaagcc 25749955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26171488 - 26171520
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  26171488 ggaaagataggggtccaaaagtgcaattaagcc 26171520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26716652 - 26716684
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  26716652 ggaaagataggggtccaaaagtgcaattaagcc 26716684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27223590 - 27223622
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  27223590 ggaaagataggggtccaaaagtgcaattaagcc 27223622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 28930747 - 28930779
Alignment:
Q  3 aaagatagggatccaaaagtgcaattaagccaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  28930747 aaagataggggtccaaaagtgcaattaagccaa 28930779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31833547 - 31833579
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  31833547 ggaaagataggggtccaaaagtgcaattaagcc 31833579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31951482 - 31951514
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  31951482 ggaaagataggggtccaaaagtgcaattaagcc 31951514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16035 - 16068
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  16035 ggaaagataggggtccaaaagtgcaattaagcca 16068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 139207 - 139178
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaa 30  Q
    ||||||||||||||||||||||||||||||    
T  139207 ggaaagatagggatccaaaagtgcaattaa 139178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1171 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1171
Description:

Target: scaffold1171; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 851 - 819
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  851 ggaaagataggggtccaaaagtgcaattaagcc 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 114 - 146
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  114 ggaaagataggggtccaaaagtgcaattaagcc 146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4802 - 4834
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  4802 ggaaagataggggtccaaaagtgcaattaagcc 4834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6900 - 6868
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  6900 ggaaagataggggtccaaaagtgcaattaagcc 6868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5624 - 5592
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  5624 ggaaagataggggtccaaaagtgcaattaagcc 5592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5874 - 5906
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  5874 ggaaagataggggtccaaaagtgcaattaagcc 5906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7753 - 7721
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  7753 ggaaagataggggtccaaaagtgcaattaagcc 7721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10909 - 10941
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  10909 ggaaagataggggtccaaaagtgcaattaagcc 10941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16199 - 16231
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  16199 ggaaagataggggtccaaaagtgcaattaagcc 16231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29682 - 29650
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  29682 ggaaagataggggtccaaaagtgcaattaagcc 29650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 29932 - 29964
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  29932 ggaaagataggggtccaaaagtgcaattaagcc 29964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 81583 - 81615
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  81583 ggaaagataggggtccaaaagtgcaattaagcc 81615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 79022 - 78990
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  79022 ggaaagataggggtccaaaagtgcaattaagcc 78990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 238905 - 238937
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  238905 ggaaagataggggtccaaaagtgcaattaagcc 238937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 400736 - 400704
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  400736 ggaaagataggggtccaaaagtgcaattaagcc 400704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 400987 - 401019
Alignment:
Q  1 ggaaagatagggatccaaaagtgcaattaagcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  400987 ggaaagataggggtccaaaagtgcaattaagcc 401019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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