View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10346_low_71 (Length: 208)
Name: NF10346_low_71
Description: NF10346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10346_low_71 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-106
Query Start/End: Original strand, 15 - 208
Target Start/End: Original strand, 40809265 - 40809458
Alignment:
| Q |
15 |
cagaaccaatatacttcaaactcgaaagatcatacttatcaaccaaaccatgtttcgctagagcgagtacaatcggtggcacaatccataatctcgtaac |
114 |
Q |
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| T |
40809265 |
cagaaccaatatacttcaaactcgaaagatcatacttatcaaccaaaccatgtttcgctagagcgagtacaatcggtggcacaatccataatctcgtaac |
40809364 |
T |
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| Q |
115 |
cctaaacttctcaatcgttttcaaaaccacttcaaactcaaaccgcttcaacgaaacaatcgcattccctctctgaagctgcgaatacgttatc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40809365 |
cctaaacttctcaatcgttttcaaaaccacttcaaactcaaaccgcttcaacgaaacaatcgcattccctctctgaagctgcgaatacgttatc |
40809458 |
T |
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