View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10347_low_7 (Length: 416)
Name: NF10347_low_7
Description: NF10347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10347_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 299
Target Start/End: Complemental strand, 7646654 - 7646370
Alignment:
| Q |
16 |
caataaagactgttttaacctctccacaagcttcatttccacgttcactctcttcaaacctttgtcgggaaacttccaccgttagattttgctccaaagc |
115 |
Q |
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| T |
7646654 |
caataaagactgttttaacctctccacaaacttcatttccacgttcactctcttcaaacctttgtcgggaaacttccaccgttagattttgctccaaagc |
7646555 |
T |
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| Q |
116 |
tgattcttcacataagatggacaaggctcaacaaaagtctagtagtgagaaaaaggaaactactgaacatgggtgagctcaaatcacgtaatttataatc |
215 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7646554 |
tgattctgcacataagatggacaaggctcaacaaaagtctagtagtgagaaaaaggaaactactgaacatgggtgagctcaaatcacgtaatttataatc |
7646455 |
T |
|
| Q |
216 |
ttcatgtgattgatttatcagtttactatcctattagggaatgg-tttatcgtgtttgtttttaacttcttcaatttctcttatt |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
7646454 |
ttcatgtgattgatttatcagtttactatcctattagggaatggttttatcgtgtttgtttttaacttcttcaatttctcttatt |
7646370 |
T |
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