View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10348_4 (Length: 341)
Name: NF10348_4
Description: NF10348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10348_4 |
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Alignment Details
Target: chr8 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 2 - 331
Target Start/End: Original strand, 35378033 - 35378362
Alignment:
| Q |
2 |
aaattgacgactgtcattgggtgatcagaattaagtgacttaatttctcaattttgacaggcggaaagaagacgaaaacttggattggctccagaggagc |
101 |
Q |
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| T |
35378033 |
aaattgacgactgtcattgggtgatcagaattaagtgacttaatttctctattatgacaggcggaaagaagacgaaaacttggattggctccagaggagc |
35378132 |
T |
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| Q |
102 |
cttcaacagccaaaccttcagctgttgtagaggagaaaaaggtattaacttgtccagaaatggtggtgttttttatgccatacctatttatttgaaattt |
201 |
Q |
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| T |
35378133 |
cttcaacagccaaaccttcagctgttgtagaggagaaaaaggtattaacttgtccagaaatggtggtgttttttatgccatacctatttatttgaaattt |
35378232 |
T |
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| Q |
202 |
tgaaatttctgcatgcagagtttcctgccaattaggcctgccacaaaaaccgagcagatgagggagtgcttgcgttctctcaagcagaaccacaaggtac |
301 |
Q |
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| T |
35378233 |
tgaaatttctgcatgcagagtttcctgccaattaggcctgccacaaaaaccgagcagatgagggagtgcttgcgttctctcaagcagaaccacaaggtac |
35378332 |
T |
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| Q |
302 |
atttacattttcacttggtgagattctgtg |
331 |
Q |
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| T |
35378333 |
atttacattttcacttggtgagattctgtg |
35378362 |
T |
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