View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10349_high_18 (Length: 249)
Name: NF10349_high_18
Description: NF10349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10349_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 45681258 - 45681480
Alignment:
| Q |
13 |
ggacgttggaattatatttaaattctcattagaaagatgcttctaaaattctaatctccataatacatacccttatcttatcttatac--ttcccaatcc |
110 |
Q |
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| T |
45681258 |
ggacgttggaattatatttaaattctcattagaaagatgcttctaaaattctaatctccataatacatacccttatcttatcttatacacttcccaatcc |
45681357 |
T |
|
| Q |
111 |
catatgagttgttcagctaagtcaaactccaaatattaaaatagaaatgtaacttgtattttattgacagaacaaaaaatgtaatgctccattgctcttg |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45681358 |
catatgagttgttcagctaagtcaaactccaaatattaaaataaaaatgtaacttgtattttattgacagaacaaaaaatgtaatgctccattgctcttg |
45681457 |
T |
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| Q |
211 |
ctgtatatatatgcctataatat |
233 |
Q |
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||||||||||||||||||||||| |
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| T |
45681458 |
ctgtatatatatgcctataatat |
45681480 |
T |
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