View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10349_high_8 (Length: 359)
Name: NF10349_high_8
Description: NF10349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10349_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 16203025 - 16203356
Alignment:
| Q |
17 |
atgagttctccattgattcgtagtgtagatgaggttgttctccaagtgttgtgtttttgttgtactgttcatggcttccagctgaagggtattgagtttt |
116 |
Q |
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| T |
16203025 |
atgagttctccattgattcatagtgtagatgcggttgttctccaagtgttgtgtttttgttgtactgttcatggcttccagctgaagggttttgagtttt |
16203124 |
T |
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| Q |
117 |
cattgcactagagtgttgtggttgcatatattgaccatgacttgtagcagaatggtgttcagttggtaaccctgccctaaactgatcatggcttccagaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16203125 |
cattgcactagagtgttgtggttgcatatattgaccatgacttgtagcagaatggtgttcagttggtaaccctgccctaaactgatcatggcttccagaa |
16203224 |
T |
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| Q |
217 |
gacgggtacggagtttgcattgcacctgaatgatgtggcaagtttgtagcagattggtgttgaggattagcctcagttgcactagaatatggtgacaaat |
316 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
16203225 |
gatgggtacggagtttgcattgcacctgaatgatgtggcaagtttgtagcagattggtgttgaggattagcctcagtagcactagaatatggtgacaaat |
16203324 |
T |
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| Q |
317 |
attggtcttcactagtgtttaaagggtgatga |
348 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
16203325 |
attggtcttcactagtgtttaaagggtgatga |
16203356 |
T |
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