View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1034_low_8 (Length: 262)
Name: NF1034_low_8
Description: NF1034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1034_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 31423933 - 31423810
Alignment:
| Q |
3 |
aaattatccacgaccaccccatccgaacgctacaaaccatcacacacaactacacaaacctacgcaaccatctcgctccaccgctaacagtaccacacca |
102 |
Q |
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| T |
31423933 |
aaattatccacaatcaccccatccgaacgctacaaaccatcacacaccactacacaaacctacacaaccatctcgctccactgctaacagtaccacacca |
31423834 |
T |
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| Q |
103 |
aacaaccacacaaaaccaacgtga |
126 |
Q |
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|||||||||||||||||||||||| |
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| T |
31423833 |
aacaaccacacaaaaccaacgtga |
31423810 |
T |
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