View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10350_high_11 (Length: 235)
Name: NF10350_high_11
Description: NF10350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10350_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 47120848 - 47120638
Alignment:
| Q |
4 |
ggatgtgtgcgctgcaaatctcgatctatctgttccgctatctctgtatgctagaaaatgggtagccggtgatatgtatctacttcattatcttgaaggc |
103 |
Q |
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| T |
47120848 |
ggatgtgtgcgctgcaaatctcgatctatctgttctgctatctctgtatgctagaaaatgggtagccggtgatatgtatccacttcattatcttgaaggc |
47120749 |
T |
|
| Q |
104 |
gtccaaagtaactataaaatggagaagaaactaacctgaaaatattgtctccaaagactttccttatcgaggctcaaagggtgatcttccacgggaattt |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47120748 |
gtccaaagtaactataaaatggagaagaaactaacctgaaaatattgtctccaaagactttccttatcgaggctcaaagggtgatcttccacgggaattt |
47120649 |
T |
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| Q |
204 |
catgtcgcctg |
214 |
Q |
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||||||||||| |
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| T |
47120648 |
catgtcgcctg |
47120638 |
T |
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