View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10350_low_6 (Length: 389)
Name: NF10350_low_6
Description: NF10350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10350_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 378
Target Start/End: Original strand, 10291512 - 10291888
Alignment:
| Q |
1 |
atttttagagagaaagagagggagtattttaaacttttttgtgtttgattcaatttttatgagggaaggagaagaggagcaaaatcgctcataaataatt |
100 |
Q |
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| T |
10291512 |
atttttagagaggaagagagggagtagttttt--ttttttttgtttgattcaatttctatgagggaaggagaagaggagcaaaatcgctcataaataatt |
10291609 |
T |
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| Q |
101 |
aaaataattaatttaatttgttcaaactagaatttgaactcgaattttcctgaaaaattt---gttattaacttaatttcactaaccacttgagtaaaat |
197 |
Q |
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| T |
10291610 |
aaaataattaatttaatttgttccaactagaatttgaatttgaatttttc--aaaatttttttgttattaactcaatttcactaaccacttgagtaaaat |
10291707 |
T |
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| Q |
198 |
tattcatttaaataagatacaaatttataacaaattatattctttgannnnnnnaagcaaaaattagaatgtaaaagcatcagataataattttgttggc |
297 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
10291708 |
tattcatttaaataagatacaaatatataacaaattatattctttgatttttttaagcaaaaattagaatgtaaaagcattagataataattttgttggc |
10291807 |
T |
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| Q |
298 |
cacaatctttcattcatttcacattatattctttaataacgattacagtgaaactcgaaccacaatcattcattcattcat |
378 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |
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| T |
10291808 |
cacaatctttcattcatttcacattatattctttaataacgattgcaggggaactcgaaccacaatcattcattcattcat |
10291888 |
T |
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