View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10351_high_7 (Length: 250)

Name: NF10351_high_7
Description: NF10351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10351_high_7
NF10351_high_7
[»] chr8 (29 HSPs)
chr8 (87-242)||(13224998-13225153)
chr8 (90-242)||(9928943-9929095)
chr8 (87-242)||(41681493-41681648)
chr8 (87-242)||(19176321-19176476)
chr8 (87-242)||(44831278-44831433)
chr8 (90-242)||(12572210-12572362)
chr8 (87-242)||(11656816-11656971)
chr8 (88-242)||(33328499-33328653)
chr8 (87-242)||(31133579-31133734)
chr8 (89-242)||(33742955-33743107)
chr8 (87-216)||(41681165-41681292)
chr8 (87-207)||(34540942-34541062)
chr8 (87-217)||(19176675-19176804)
chr8 (87-217)||(11656486-11656616)
chr8 (94-207)||(4629835-4629948)
chr8 (87-217)||(12571894-12572024)
chr8 (87-217)||(9930042-9930171)
chr8 (87-217)||(13224672-13224800)
chr8 (87-217)||(33328189-33328318)
chr8 (89-217)||(31133253-31133380)
chr8 (148-242)||(9177724-9177818)
chr8 (91-217)||(44831630-44831755)
chr8 (108-217)||(33743304-33743412)
chr8 (87-165)||(9178071-9178149)
chr8 (91-164)||(11336959-11337032)
chr8 (90-217)||(4630177-4630297)
chr8 (90-165)||(10918160-10918235)
chr8 (135-182)||(43958264-43958311)
chr8 (87-163)||(8073990-8074065)
[»] chr7 (28 HSPs)
chr7 (87-242)||(19590884-19591039)
chr7 (87-242)||(2658870-2659025)
chr7 (87-242)||(38859000-38859155)
chr7 (87-242)||(32004645-32004800)
chr7 (87-242)||(35288934-35289089)
chr7 (87-242)||(37787126-37787281)
chr7 (87-242)||(19830779-19830933)
chr7 (87-242)||(29099881-29100036)
chr7 (87-242)||(34533822-34533977)
chr7 (104-242)||(4641803-4641941)
chr7 (89-239)||(23952764-23952914)
chr7 (87-217)||(19830451-19830580)
chr7 (87-217)||(19590556-19590685)
chr7 (87-217)||(37786798-37786927)
chr7 (87-217)||(34534176-34534305)
chr7 (91-217)||(38858678-38858803)
chr7 (90-217)||(23953114-23953240)
chr7 (87-206)||(35289297-35289415)
chr7 (87-217)||(2659225-2659354)
chr7 (91-217)||(32004999-32005124)
chr7 (90-217)||(29100236-29100362)
chr7 (91-217)||(4641475-4641600)
chr7 (87-217)||(4478085-4478214)
chr7 (155-242)||(4477800-4477887)
chr7 (87-172)||(38160982-38161067)
chr7 (87-167)||(28584356-28584436)
chr7 (87-182)||(28583470-28583565)
chr7 (172-217)||(32427406-32427450)
[»] chr6 (37 HSPs)
chr6 (87-242)||(22219712-22219867)
chr6 (87-242)||(12935188-12935343)
chr6 (87-242)||(11445346-11445501)
chr6 (87-242)||(23075487-23075642)
chr6 (87-242)||(31470346-31470501)
chr6 (87-242)||(20741460-20741618)
chr6 (87-217)||(10899970-10900100)
chr6 (89-242)||(18257496-18257649)
chr6 (87-242)||(18504950-18505105)
chr6 (87-242)||(2319703-2319857)
chr6 (90-219)||(11276624-11276753)
chr6 (87-242)||(4811616-4811770)
chr6 (87-217)||(10900315-10900444)
chr6 (91-236)||(15827673-15827819)
chr6 (91-217)||(18257172-18257297)
chr6 (87-217)||(20741131-20741260)
chr6 (88-217)||(31470701-31470829)
chr6 (91-217)||(11276967-11277092)
chr6 (87-217)||(15828026-15828155)
chr6 (88-217)||(1149816-1149945)
chr6 (91-217)||(12935542-12935667)
chr6 (90-216)||(18505305-18505430)
chr6 (87-217)||(28472668-28472796)
chr6 (87-217)||(29859857-29859985)
chr6 (87-217)||(11445018-11445147)
chr6 (90-173)||(2322646-2322729)
chr6 (90-217)||(4811406-4811532)
chr6 (87-153)||(23074030-23074096)
chr6 (87-144)||(1149496-1149553)
chr6 (109-173)||(18296198-18296262)
chr6 (87-159)||(29033465-29033537)
chr6 (89-182)||(3835145-3835238)
chr6 (88-167)||(29035071-29035150)
chr6 (186-242)||(1149558-1149614)
chr6 (149-219)||(35163570-35163639)
chr6 (161-235)||(32836106-32836179)
chr6 (198-242)||(28472997-28473041)
[»] chr5 (47 HSPs)
chr5 (87-242)||(19359495-19359650)
chr5 (87-242)||(5818960-5819115)
chr5 (87-242)||(8647797-8647952)
chr5 (87-242)||(2864785-2864940)
chr5 (87-242)||(8461290-8461445)
chr5 (87-242)||(18183001-18183156)
chr5 (90-242)||(24331593-24331747)
chr5 (87-242)||(29454771-29454926)
chr5 (91-240)||(14215276-14215425)
chr5 (89-242)||(164224-164376)
chr5 (87-242)||(25000448-25000603)
chr5 (87-235)||(15709335-15709482)
chr5 (91-242)||(16018946-16019097)
chr5 (104-242)||(15371918-15372060)
chr5 (87-242)||(24361868-24362022)
chr5 (87-217)||(2865140-2865269)
chr5 (87-217)||(5819314-5819443)
chr5 (87-217)||(8647469-8647598)
chr5 (87-217)||(15372258-15372387)
chr5 (87-217)||(18183354-18183483)
chr5 (87-213)||(19359167-19359292)
chr5 (87-217)||(24362221-24362350)
chr5 (90-217)||(29455127-29455253)
chr5 (87-217)||(8460961-8461090)
chr5 (87-242)||(24325243-24325397)
chr5 (87-217)||(15709002-15709130)
chr5 (89-217)||(14215628-14215755)
chr5 (87-217)||(164576-164705)
chr5 (87-217)||(14463906-14464034)
chr5 (87-217)||(25000121-25000250)
chr5 (91-217)||(24331945-24332073)
chr5 (155-239)||(10721884-10721967)
chr5 (138-218)||(14462686-14462770)
chr5 (90-182)||(6019189-6019282)
chr5 (90-182)||(7348593-7348685)
chr5 (170-235)||(27307174-27307238)
chr5 (93-173)||(4222150-4222230)
chr5 (90-182)||(7349436-7349528)
chr5 (91-173)||(4623183-4623265)
chr5 (90-184)||(6018348-6018441)
chr5 (87-173)||(16018620-16018705)
chr5 (155-242)||(28494942-28495029)
chr5 (173-235)||(16752938-16752998)
chr5 (104-173)||(4219711-4219780)
chr5 (89-182)||(4624644-4624737)
chr5 (211-242)||(14463732-14463763)
chr5 (150-232)||(41834430-41834511)
[»] chr3 (60 HSPs)
chr3 (87-242)||(37727289-37727444)
chr3 (87-242)||(4275723-4275878)
chr3 (87-242)||(20840920-20841075)
chr3 (87-235)||(39555609-39555757)
chr3 (87-242)||(25853265-25853420)
chr3 (88-242)||(22424846-22425000)
chr3 (90-242)||(31778687-31778839)
chr3 (87-242)||(29801775-29801930)
chr3 (87-242)||(43973799-43973954)
chr3 (89-242)||(27393694-27393847)
chr3 (87-240)||(41047060-41047212)
chr3 (87-242)||(17464522-17464677)
chr3 (87-234)||(26837391-26837538)
chr3 (90-242)||(26274601-26274753)
chr3 (87-242)||(5137340-5137495)
chr3 (87-242)||(23644823-23644979)
chr3 (94-242)||(24300594-24300742)
chr3 (91-242)||(32534994-32535145)
chr3 (91-240)||(30098121-30098273)
chr3 (87-217)||(31779037-31779166)
chr3 (87-217)||(39555962-39556091)
chr3 (87-212)||(48453020-48453144)
chr3 (87-217)||(5137011-5137140)
chr3 (87-217)||(41046731-41046860)
chr3 (87-217)||(20840591-20840720)
chr3 (96-217)||(37726969-37727089)
chr3 (87-206)||(23644493-23644611)
chr3 (87-217)||(24300941-24301070)
chr3 (87-206)||(22425209-22425327)
chr3 (90-217)||(25853612-25853738)
chr3 (87-217)||(32535344-32535477)
chr3 (87-217)||(27393962-27394091)
chr3 (89-217)||(26274952-26275078)
chr3 (109-217)||(43973494-43973601)
chr3 (91-167)||(29801391-29801467)
chr3 (89-217)||(30104515-30104641)
chr3 (87-217)||(26837741-26837869)
chr3 (89-182)||(25612396-25612489)
chr3 (111-217)||(17464876-17464982)
chr3 (87-182)||(23228427-23228521)
chr3 (91-198)||(51474737-51474844)
chr3 (88-173)||(32697128-32697213)
chr3 (91-182)||(50116828-50116919)
chr3 (90-167)||(18010179-18010256)
chr3 (38-82)||(26671677-26671721)
chr3 (94-164)||(51473466-51473536)
chr3 (106-171)||(45965988-45966053)
chr3 (170-236)||(8873804-8873869)
chr3 (89-167)||(25420575-25420653)
chr3 (1-35)||(26671711-26671745)
chr3 (87-173)||(37220588-37220674)
chr3 (170-242)||(37076034-37076107)
chr3 (169-217)||(55192230-55192277)
chr3 (91-153)||(25419179-25419242)
chr3 (170-217)||(49407909-49407955)
chr3 (169-235)||(50900645-50900710)
chr3 (155-217)||(50900914-50900975)
chr3 (155-232)||(2323477-2323553)
chr3 (89-142)||(37222030-37222083)
chr3 (149-217)||(37075781-37075848)
[»] chr4 (58 HSPs)
chr4 (91-242)||(22434214-22434365)
chr4 (91-242)||(45082783-45082934)
chr4 (87-242)||(15523266-15523421)
chr4 (87-242)||(23494802-23494957)
chr4 (87-242)||(25447278-25447433)
chr4 (87-242)||(46193436-46193591)
chr4 (87-242)||(12234688-12234843)
chr4 (87-242)||(20470870-20471025)
chr4 (90-237)||(48526545-48526692)
chr4 (87-242)||(51021155-51021309)
chr4 (87-242)||(54995100-54995255)
chr4 (87-242)||(4219918-4220073)
chr4 (87-242)||(11153177-11153332)
chr4 (87-242)||(18751630-18751785)
chr4 (87-242)||(25938030-25938185)
chr4 (87-242)||(2118324-2118480)
chr4 (91-242)||(12503471-12503622)
chr4 (91-217)||(33109719-33109844)
chr4 (87-217)||(25447621-25447750)
chr4 (88-217)||(25937702-25937830)
chr4 (94-217)||(38962204-38962326)
chr4 (87-217)||(11153532-11153661)
chr4 (94-216)||(12234367-12234488)
chr4 (87-217)||(23494474-23494603)
chr4 (87-217)||(46193790-46193919)
chr4 (87-216)||(4219588-4219716)
chr4 (90-217)||(15523619-15523745)
chr4 (87-182)||(33109883-33109978)
chr4 (87-217)||(22434563-22434690)
chr4 (89-217)||(48526229-48526355)
chr4 (94-217)||(51020835-51020957)
chr4 (105-217)||(22170322-22170433)
chr4 (109-217)||(45082484-45082590)
chr4 (87-206)||(2118692-2118809)
chr4 (87-164)||(20958296-20958373)
chr4 (87-167)||(18763954-18764034)
chr4 (87-173)||(35363028-35363115)
chr4 (87-173)||(43243708-43243794)
chr4 (87-217)||(54995453-54995581)
chr4 (124-217)||(12503821-12503913)
chr4 (114-182)||(43242328-43242396)
chr4 (88-167)||(48713780-48713859)
chr4 (90-182)||(16690970-16691062)
chr4 (89-173)||(44892576-44892660)
chr4 (106-162)||(48708345-48708401)
chr4 (87-182)||(43281210-43281304)
chr4 (87-184)||(10258304-10258401)
chr4 (117-198)||(44220781-44220861)
chr4 (91-167)||(20957224-20957300)
chr4 (90-165)||(48294979-48295054)
chr4 (89-182)||(16691491-16691583)
chr4 (89-165)||(44890550-44890626)
chr4 (170-229)||(40160465-40160523)
chr4 (198-236)||(10795692-10795730)
chr4 (155-217)||(17504072-17504133)
chr4 (155-217)||(17504345-17504407)
chr4 (91-165)||(48293629-48293703)
chr4 (170-235)||(35193672-35193735)
[»] chr2 (39 HSPs)
chr2 (91-242)||(7446705-7446856)
chr2 (87-242)||(18450861-18451016)
chr2 (87-242)||(43058692-43058846)
chr2 (87-240)||(40027501-40027654)
chr2 (87-242)||(40815376-40815531)
chr2 (87-242)||(239711-239866)
chr2 (87-242)||(22374684-22374839)
chr2 (87-242)||(28616973-28617128)
chr2 (87-242)||(1978468-1978623)
chr2 (87-242)||(11090879-11091034)
chr2 (91-242)||(3025822-3025972)
chr2 (87-217)||(26538463-26538593)
chr2 (87-235)||(8425386-8425533)
chr2 (87-242)||(14432500-14432655)
chr2 (87-217)||(11090552-11090681)
chr2 (87-217)||(239384-239512)
chr2 (87-217)||(1978139-1978268)
chr2 (87-217)||(22374351-22374480)
chr2 (87-217)||(40027171-40027300)
chr2 (87-217)||(40815730-40815859)
chr2 (87-217)||(43058364-43058493)
chr2 (87-217)||(28616644-28616774)
chr2 (90-217)||(8425745-8425871)
chr2 (87-217)||(3025497-3025625)
chr2 (87-217)||(18451216-18451345)
chr2 (91-217)||(26538132-26538257)
chr2 (87-217)||(14432173-14432302)
chr2 (90-174)||(28847122-28847206)
chr2 (87-182)||(20444780-20444875)
chr2 (90-213)||(7446376-7446497)
chr2 (87-167)||(20440465-20440545)
chr2 (87-167)||(35781097-35781177)
chr2 (93-182)||(8972274-8972363)
chr2 (91-182)||(35779743-35779834)
chr2 (87-173)||(15552482-15552567)
chr2 (91-167)||(15551534-15551610)
chr2 (155-217)||(28143416-28143477)
chr2 (149-217)||(14942230-14942297)
chr2 (155-215)||(31797166-31797225)
[»] chr1 (41 HSPs)
chr1 (87-242)||(5539847-5540002)
chr1 (90-242)||(21856076-21856228)
chr1 (87-242)||(17433574-17433729)
chr1 (87-242)||(18984478-18984633)
chr1 (87-242)||(33143948-33144103)
chr1 (87-242)||(50970309-50970464)
chr1 (87-243)||(15646223-15646379)
chr1 (87-242)||(8678572-8678727)
chr1 (87-242)||(15173453-15173607)
chr1 (87-242)||(29869978-29870133)
chr1 (87-242)||(39154379-39154534)
chr1 (87-242)||(4636330-4636485)
chr1 (89-217)||(29307326-29307454)
chr1 (94-240)||(5962616-5962762)
chr1 (87-229)||(26859090-26859232)
chr1 (110-242)||(17112335-17112467)
chr1 (87-217)||(50970663-50970792)
chr1 (89-217)||(9019347-9019475)
chr1 (90-217)||(18984153-18984279)
chr1 (87-217)||(5540203-5540332)
chr1 (87-217)||(15646580-15646709)
chr1 (87-217)||(29306984-29307113)
chr1 (87-217)||(33144304-33144433)
chr1 (87-217)||(8678927-8679055)
chr1 (87-217)||(15173127-15173256)
chr1 (91-217)||(29869655-29869780)
chr1 (87-217)||(5962963-5963092)
chr1 (87-206)||(9019004-9019122)
chr1 (87-217)||(17433247-17433376)
chr1 (87-217)||(21856428-21856557)
chr1 (91-217)||(39154054-39154179)
chr1 (90-206)||(26859456-26859570)
chr1 (87-182)||(52268321-52268416)
chr1 (116-217)||(4636033-4636132)
chr1 (87-156)||(47827033-47827102)
chr1 (91-172)||(52269177-52269258)
chr1 (87-142)||(2733416-2733471)
chr1 (155-217)||(17088526-17088587)
chr1 (155-236)||(45048504-45048583)
chr1 (149-217)||(17088243-17088310)
chr1 (93-217)||(44802557-44802680)
[»] scaffold0273 (2 HSPs)
scaffold0273 (95-242)||(4242-4389)
scaffold0273 (91-217)||(4592-4717)
[»] scaffold0951 (2 HSPs)
scaffold0951 (87-240)||(2028-2181)
scaffold0951 (87-217)||(1698-1827)
[»] scaffold0417 (2 HSPs)
scaffold0417 (87-235)||(10989-11137)
scaffold0417 (87-217)||(10652-10781)
[»] scaffold0157 (2 HSPs)
scaffold0157 (91-242)||(16855-17006)
scaffold0157 (124-217)||(16564-16656)
[»] scaffold0007 (3 HSPs)
scaffold0007 (91-242)||(64664-64815)
scaffold0007 (91-217)||(64337-64462)
scaffold0007 (92-217)||(205754-205877)
[»] scaffold1223 (2 HSPs)
scaffold1223 (91-217)||(1125-1251)
scaffold1223 (87-217)||(784-912)
[»] scaffold0295 (2 HSPs)
scaffold0295 (87-236)||(5160-5305)
scaffold0295 (87-217)||(4824-4953)
[»] scaffold0027 (2 HSPs)
scaffold0027 (94-217)||(42207-42330)
scaffold0027 (90-217)||(42544-42669)
[»] scaffold0019 (1 HSPs)
scaffold0019 (87-217)||(134058-134187)
[»] scaffold0432 (2 HSPs)
scaffold0432 (88-242)||(9964-10116)
scaffold0432 (90-216)||(10259-10383)
[»] scaffold0176 (2 HSPs)
scaffold0176 (87-217)||(18866-18994)
scaffold0176 (87-153)||(19069-19135)
[»] scaffold0113 (1 HSPs)
scaffold0113 (87-167)||(28677-28757)
[»] scaffold1585 (1 HSPs)
scaffold1585 (87-167)||(598-678)
[»] scaffold0168 (1 HSPs)
scaffold0168 (105-199)||(7691-7784)
[»] scaffold0076 (1 HSPs)
scaffold0076 (90-159)||(8451-8520)
[»] scaffold1696 (1 HSPs)
scaffold1696 (87-172)||(480-565)
[»] scaffold0057 (1 HSPs)
scaffold0057 (90-182)||(61877-61969)


Alignment Details
Target: chr8 (Bit Score: 136; Significance: 5e-71; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 13225153 - 13224998
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  13225153 ggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 13225054  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13225053 ctccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 13224998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 9928943 - 9929095
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  9928943 ctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctccttttttcaaactc 9929042  T
Q  190 caaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || ||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  9929043 cagaaacgcagagaaatgtcagttttaggcggttttagacctacccttatgct 9929095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 41681648 - 41681493
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  41681648 ggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctgctattttcaaa 41681549  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41681548 ctccagaaacgcagagaaatggtagttttaggcggttttagacctacccctatgct 41681493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 19176321 - 19176476
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  19176321 ggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtccgacctcctattttcaaa 19176420  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  19176421 ctccagaaacgcagagaaatgacaattttaggcggttttagacctacccatatgct 19176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 44831278 - 44831433
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  44831278 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgcatttttcgtcctacctcctattttcaaa 44831377  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  44831378 ctccataaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 44831433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 90 - 242
Target Start/End: Complemental strand, 12572362 - 12572210
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    |||||||||||||  ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  12572362 ctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactc 12572263  T
Q  190 caaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  12572262 cagaaacgcagagaaattgcagttttaggcggttttagatctacccctatgct 12572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 11656971 - 11656816
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||| | |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  11656971 ggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 11656872  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  11656871 ctccagaaacgcagagaaatagcagttttaggcgattgtagacctacccctatgct 11656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 88 - 242
Target Start/End: Complemental strand, 33328653 - 33328499
Alignment:
Q  88 gcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaac 187  Q
    |||||||||||||||  ||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||||||||    
T  33328653 gcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttgcatttttcgtcccacctcccattttcaaac 33328554  T
Q  188 tccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33328553 tccagaaacgcagagaaatggcagttttaggcggttttaaacctacccctatgct 33328499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 31133734 - 31133579
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||    
T  31133734 ggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgcatttttcgtcatacctcctattttcaaa 31133635  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||| ||||||||||| | |||||| ||||||||||||||| | |||||||    
T  31133634 ctccagaaatgcagagaaatgacggttttatgcggttttagacctatctctatgct 31133579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 89 - 242
Target Start/End: Original strand, 33742955 - 33743107
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||||| |||| |||||||||||||||||||||| ||||| |||||||| |||||||| |||||||||||| |||||||||||||||| ||     
T  33742955 cctactcacgaaactggtcttgcccttttaaaacagaacaaa-cggtctttcaattatcatttttgatgcatttttcgtcctacctcctattttcatacc 33743053  T
Q  189 ccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  33743054 ccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 33743107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 41681165 - 41681292
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  41681165 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc-cccatttt-att 41681262  T
Q  187 ctccaaaaacgcagagaaatggcagtttta 216  Q
    ||||||||||||||||||||| ||||||||    
T  41681263 ctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 34541062 - 34540942
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  34541062 ggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 34540963  T
Q  187 ctccaaaaacgcagagaaatg 207  Q
    ||  | |||||||||||||||    
T  34540962 cttaagaaacgcagagaaatg 34540942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 19176804 - 19176675
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  19176804 ggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 19176706  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||| ||||| |||||||||    
T  19176705 ctccaaaaacgcagacaaatgacagttttag 19176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 11656486 - 11656616
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  11656486 ggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttgcatttttcgtcctaccccccatttt-att 11656584  T
Q  187 ctcc-aaaaacgcagagaaatggcagttttag 217  Q
    |||| |||||||||||||||||||||||||||    
T  11656585 ctccaaaaaacgcagagaaatggcagttttag 11656616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 4629835 - 4629948
Alignment:
Q  94 tcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaa 193  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||||  |||||||||||||||||||||| |    
T  4629835 tcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattgcatttttcgtcttacctcctattttcaaactccaga 4629934  T
Q  194 aacgcagagaaatg 207  Q
    |||||| |||||||    
T  4629935 aacgcaaagaaatg 4629948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 12571894 - 12572024
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttct-acctcctattttcaa 185  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| || ||||| |     
T  12571894 ggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaaccccccatttt-at 12571992  T
Q  186 actccaaaaacgcagagaaatggcagttttag 217  Q
     ||||||||||||||||||||| |||||||||    
T  12571993 tctccaaaaacgcagagaaatgacagttttag 12572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 9930171 - 9930042
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||||| ||||| || ||||| |      
T  9930171 ggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgttgcatttttcgtcctaccccccatttt-att 9930073  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    |||||||| ||||||||||||  ||||||||    
T  9930072 ctccaaaagcgcagagaaatgatagttttag 9930042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 13224672 - 13224800
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||| ||||| || ||||| |      
T  13224672 ggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaatttttcgtcctaccccccatttt-att 13224769  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  13224770 ctccaaaaacgcagagaaatgacagttttag 13224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 33328189 - 33328318
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||  | ||||| |      
T  33328189 ggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctaccctcgatttt-att 33328287  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||| ||||||| |||||||||    
T  33328288 ctccaaaaacgcaaagaaatgacagttttag 33328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 31133253 - 31133380
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||||| ||||| |||||||||||||| |||||||| ||||||||| || ||||||||||||||||||||| ||||| || ||||| |  ||    
T  31133253 cctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttgcatttttcgtcctaccccccatttt-attct 31133351  T
Q  189 ccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||| ||||||||| |||||||||    
T  31133352 ccaaaaacgtagagaaatgacagttttag 31133380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 9177724 - 9177818
Alignment:
Q  148 atttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    |||||||||||||||||| | | |||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacccctatgct 9177818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 44831755 - 44831630
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||| || ||||| || ||||| |  ||||    
T  44831755 tactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttgcatttttggtcctaccccccatttt-attctcc 44831657  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    |||||| |||||||||| |||||||||    
T  44831656 aaaaacacagagaaatgacagttttag 44831630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 33743412 - 33743304
Alignment:
Q  108 ctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatg 207  Q
    ||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||| || ||||| |  ||||||||||||||||||||     
T  33743412 ctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaata 33743314  T
Q  208 gcagttttag 217  Q
     |||||||||    
T  33743313 acagttttag 33743304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 9178149 - 9178071
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttc 165  Q
    |||||||||||||||| | || |||||| ||||||||||||||||||||||||||| || |||||||||||||||||||    
T  9178149 ggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttc 9178071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 11337032 - 11336959
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcattttt 164  Q
    |||||||||||  ||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  11337032 tactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 4630297 - 4630177
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||  ||||||||  ||||||||||||| | ||||||||||||||||      |||||||||||||| | ||||| || ||||| |  |||    
T  4630297 ctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgcatttttcatcctaccccccatttt-attctc 4630205  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||| ||||| |||||||||    
T  4630204 caaaaacgcagaaaaatgacagttttag 4630177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 10918160 - 10918235
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttc 165  Q
    ||||||||||||  |||| ||||   |||||||||| |||||  ||||||||| || |||||||||||||||||||    
T  10918160 ctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgcatttttc 10918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 43958264 - 43958311
Alignment:
Q  135 tccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    ||||||||||| ||||||||||||||||||||| |||||  |||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctatttt 43958311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 8074065 - 8073990
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttt 163  Q
    |||||| ||||||||  | || || ||||||||||||||||||||   ||||||||||| || ||||||||||||||    
T  8074065 ggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttgttgcatttt 8073990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 5e-71; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 19591039 - 19590884
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  19591039 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 19590940  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19590939 ctccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 19590884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 2658870 - 2659025
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  2658870 ggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcatacctcctattttcaaa 2658969  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  2658970 ctccaaaaacgcagagaaatggcagttttaggccgttttagacctacacctatgct 2659025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 38859155 - 38859000
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  38859155 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgcatttttcgtcctacctcctattttcaaa 38859056  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  38859055 ctccagaaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 38859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 32004645 - 32004800
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  32004645 ggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgccctacctcctattttcaaa 32004744  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  32004745 ctccagaaacgcagagaaatgacagttttaagcggttttagacctacccctatgct 32004800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 35288934 - 35289089
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| || ||||||||||    
T  35288934 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacttcatattttcaaa 35289033  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  35289034 ctccagaaacacagagaaatgacagttttaagcggttttagacctacccctatgct 35289089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 37787281 - 37787126
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  37787281 ggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 37787182  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  37787181 ctccagaaacgcagagaaatgacagtttttggcagttttagacctacccctatgct 37787126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 19830933 - 19830779
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||| |||| ||||||| |||||||||||| ||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  19830933 ggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttgttgcattttt-gtcctacctcctattttcaaa 19830835  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  19830834 ctccagaaacacagagaaatgacagttttaggcggttttagacctacccctatgct 19830779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 29099881 - 29100036
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  29099881 ggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 29099980  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||| ||||| ||| ||||| ||||||||||  |||||||||||||| |||||||    
T  29099981 ccccagaaacgtagataaatgacagttttaggaagttttagacctacctctatgct 29100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 34533822 - 34533977
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||| |||||||||||||| |||| |||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  34533822 ggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttgcattttccgtcctacctcctattttcaaa 34533921  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  34533922 ctccaaaaacgcagagaaatgacacttttaggcagttttagacctacccctatgct 34533977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 4641941 - 4641803
Alignment:
Q  104 ggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagaga 203  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||| | |||||||||||    
T  4641941 ggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatatttcgtcctacgtcctattttcaaactctagaaacgcagaga 4641842  T
Q  204 aatggcagttttaggcggttttagacctacccctatgct 242  Q
    |||| ||||||||||||||||||||| |||| |||||||    
T  4641841 aatgacagttttaggcggttttagacatacctctatgct 4641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 89 - 239
Target Start/End: Original strand, 23952764 - 23952914
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||||||||||||     
T  23952764 cctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgcatttttcgtcctaccttctattttcaaacc 23952863  T
Q  189 ccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctat 239  Q
    ||| |||||||||||||||  |||||||||| |||||| ||||||||||||    
T  23952864 ccagaaacgcagagaaatgatagttttaggcagttttaaacctacccctat 23952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 19830451 - 19830580
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  19830451 ggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 19830549  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  19830550 ctccaaaaacgcagagaaatgacagttttag 19830580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 19590556 - 19590685
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| || ||||| |      
T  19590556 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcatcctaccccccatttt-att 19590654  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    |||||||||| |||||||||| |||||||||    
T  19590655 ctccaaaaacccagagaaatgacagttttag 19590685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 37786798 - 37786927
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  37786798 ggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 37786896  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  37786897 ctccaaaaacgcagagaaatgacagttttag 37786927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 34534305 - 34534176
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  34534305 ggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 34534207  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    |||||||||  |||||||||| |||||||||    
T  34534206 ctccaaaaaaacagagaaatgacagttttag 34534176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 38858678 - 38858803
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| || ||||| || ||||| |  ||||    
T  38858678 tactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttggtcctaccccccatttt-attctcc 38858776  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||| |||||||||    
T  38858777 aaaaacgcagagaaatgacagttttag 38858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 23953240 - 23953114
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||  |||| || ||||| |  |||    
T  23953240 ctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcataccccccatttt-attctc 23953142  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||||||  |||||||||    
T  23953141 caaaaacgcagagaaataacagttttag 23953114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 35289415 - 35289297
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||  |||| || ||||| |      
T  35289415 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgcatttttcgtcataccccccatttt-att 35289317  T
Q  187 ctccaaaaacgcagagaaat 206  Q
    ||| ||||||||||||||||    
T  35289316 ctctaaaaacgcagagaaat 35289297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 2659354 - 2659225
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||| ||| ||||| |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| | ||||| || ||||| |      
T  2659354 ggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcatcctaccccccatttt-att 2659256  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  2659255 ctccaaaaacgcagagaaatgacagttttag 2659225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 32005124 - 32004999
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||  || ||||| |  ||||    
T  32005124 tactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgcatttttcgtcctactccccatttt-attctcc 32005026  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||| |||||||||    
T  32005025 aaaaacgcagagaaatgacagttttag 32004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 29100362 - 29100236
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || ||||| || ||||| |  |||    
T  29100362 ctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcattttttgtcctaccccccatttt-attctc 29100264  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||||||  |||||||||    
T  29100263 caaaaacgcagagaaataacagttttag 29100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 4641475 - 4641600
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||| ||||| ||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||| || ||||| |  ||||    
T  4641475 tactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctcc 4641573  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    ||||| |||||||||||  ||||||||    
T  4641574 aaaaatgcagagaaatgatagttttag 4641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 4478214 - 4478085
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||| || |  |||||||||||| |||||||||||||||||||||  || | |||  ||| |      
T  4478214 ggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgcatttttcgtcttatc-cctcattttatt 4478116  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||  |||||||||    
T  4478115 ctccaaaaacgcagagaaataacagttttag 4478085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 4477800 - 4477887
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||| || ||||||||||||||||||||||| |||||||| |||||| ||||||| ||  ||||||||||||||||||||||    
T  4477800 ttgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacccctatgct 4477887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 38160982 - 38161067
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctac 172  Q
    |||||||||||||||    ||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||| ||||    
T  38160982 ggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttgttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 28584436 - 28584356
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    |||||| ||||||||  |||| || ||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||    
T  28584436 ggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttgtatttttcgt 28584356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 28583470 - 28583565
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||| || |  ||| |||||||||||||||| || ||||| |||||||||||| ||||||| ||||||||||||| ||||| || |||||    
T  28583470 ggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattgcatttttcgtcctaccccccatttt 28583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 32427450 - 32427406
Alignment:
Q  172 cctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||    
T  32427450 cctcctattttcaa-ctctaaaaacgcagagaaatgacagttttag 32427406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 5e-71; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 22219867 - 22219712
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22219867 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaa 22219768  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  22219767 ctccagaaactcagagaaatgacagttttaggcggttttagacctacccctatgct 22219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 12935188 - 12935343
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  12935188 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 12935287  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  12935288 ctccataaacgcagagaaatgacagttttaggcggttttagatatacccctatgct 12935343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 11445501 - 11445346
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  11445501 ggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 11445402  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | ||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  11445401 ctctagaaacgcagagaaatgacagttttaggcggttttagacccacccctatgct 11445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 23075642 - 23075487
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  23075642 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctatttttaaa 23075543  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  23075542 ctccaaaaatgcagagaaatgacagttttaggcagttttagacctacccttatgct 23075487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 31470346 - 31470501
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||| ||| ||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  31470346 ggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttgttgcatttttcgtcctacctcctattttcaaa 31470445  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31470446 ctccagaaacgcagagaaatggcagttttaggcgattttagacctacccctatgct 31470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 20741618 - 20741460
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgtt---gcatttttcgttctacctcctattttc 183  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| ||   ||||||||||| |||||||||||||||    
T  20741618 ggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttttttttgcatttttcgtcctacctcctattttc 20741519  T
Q  184 aaactccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  20741518 aaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 20741460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 10899970 - 10900100
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  10899970 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 10900069  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||| ||||||||||||||| |||||||||    
T  10900070 ctccagaaacgcagagaaatgacagttttag 10900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 89 - 242
Target Start/End: Complemental strand, 18257649 - 18257496
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||| ||||||| ||||    
T  18257649 cctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttacatttttcgtcctacctcatattttccaact 18257550  T
Q  189 ccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | ||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  18257549 ccatacacgtagagaaatgacagttttaggcggttttagacctacccctatgct 18257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 18504950 - 18505105
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  18504950 ggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttcatttttcgtcctacctcctattttcaaa 18505049  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | ||| | ||||||||| |||||||||||| |||||||||||||||||||||    
T  18505050 ctctagaaatgtagagaaatgacagttttaggcgattttagacctacccctatgct 18505105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 2319703 - 2319857
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  2319703 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 2319801  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  2319802 ctccagaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 2319857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 90 - 219
Target Start/End: Original strand, 11276624 - 11276753
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||| ||||| | |||| ||||||||||||||||||||| ||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||    
T  11276624 ctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgtttcatttttcgtcctacctcctattttcaaactc 11276723  T
Q  190 caaaaacgcagagaaatggcagttttaggc 219  Q
    |||||||||||||||||| |||||||||||    
T  11276724 caaaaacgcagagaaatgacagttttaggc 11276753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 4811770 - 4811616
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| ||||| | || |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||    
T  4811770 ggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcatcatacctcctattttcaaa 4811671  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||| ||||||||| |||||||| |||||||  ||||||||||||||||||||||    
T  4811670 ccccataaacgcaga-aaatggcaattttaggtagttttagacctacccctatgct 4811616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 10900444 - 10900315
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  10900444 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 10900346  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  10900345 ctccaaaaacgcagagaaatgacagttttag 10900315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 91 - 236
Target Start/End: Original strand, 15827673 - 15827819
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaa--acggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||| ||| ||| |||||||||||| ||||||  |||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  15827673 tactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgttgcatttttcgtcctacctcctattttcaaact 15827772  T
Q  189 ccaaaaacgcagagaaatggcagttttaggcggttttagacctacccc 236  Q
    ||| ||||||||| ||||| || |||||||||||||||||| ||||||    
T  15827773 ccagaaacgcagaaaaatgaca-ttttaggcggttttagacttacccc 15827819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 18257172 - 18257297
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| || ||||| |  ||||    
T  18257172 tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcataccccccatttt-attctcc 18257270  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||| |||||||||    
T  18257271 aaaaacgcagagaaatgacagttttag 18257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 20741131 - 20741260
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| ||||| || ||||| |      
T  20741131 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttgcatttttcgtcctaccccccatttt-att 20741229  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  20741230 ctccaaaaacgcagagaaatgacagttttag 20741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 88 - 217
Target Start/End: Complemental strand, 31470829 - 31470701
Alignment:
Q  88 gcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaac 187  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  |    
T  31470829 gcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attc 31470731  T
Q  188 tccaaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||||||||| || ||||||    
T  31470730 tccaaaaacgcagagaaatgacaattttag 31470701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 11277092 - 11276967
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| || ||||| |  ||||    
T  11277092 tactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctcc 11276994  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    ||||||| ||||||||| |||||||||    
T  11276993 aaaaacgaagagaaatgacagttttag 11276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 15828155 - 15828026
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  15828155 ggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 15828057  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||  |||||||||    
T  15828056 ctccaaaaacgcagagaaataacagttttag 15828026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 217
Target Start/End: Complemental strand, 1149945 - 1149816
Alignment:
Q  88 gcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaac 187  Q
    ||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  |    
T  1149945 gcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttgcatttttcgtcctaccccccatttt-attc 1149847  T
Q  188 tcc-aaaaacgcagagaaatggcagttttag 217  Q
    ||| ||||||||||||||||| |||||||||    
T  1149846 tccaaaaaacgcagagaaatgacagttttag 1149816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 12935667 - 12935542
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| || ||||| |  ||||    
T  12935667 tactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgttacatttttcgtcctaccccccatttt-attctcc 12935569  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    | |||| |||||||||| |||||||||    
T  12935568 ataaacacagagaaatgacagttttag 12935542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 18505430 - 18505305
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| | |||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||| || ||||| |  |||    
T  18505430 ctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctc 18505332  T
Q  190 caaaaacgcagagaaatggcagtttta 216  Q
    ||| |||| ||||||||| ||||||||    
T  18505331 caacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 28472668 - 28472796
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||| ||||||||||  ||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  28472668 ggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgcatttttcgtcctacc-cccatttt-att 28472765  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  28472766 ctccaaaaacgcagagaaatgacagttttag 28472796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 29859857 - 29859985
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||| ||||||||||  ||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  29859857 ggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgcatttttcgtcctacc-cccatttt-att 29859954  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  29859955 ctccaaaaacgcagagaaatgacagttttag 29859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 11445018 - 11445147
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||| | |||||||||| |||||||||||| |||| ||||||||||||| ||||||||||||||||||||| |||||  | ||||| |      
T  11445018 ggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttgcatttttcgtcctaccctccatttt-att 11445116  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||| |||||| |||||||||| |||||||||    
T  11445117 ctctaaaaacacagagaaatgacagttttag 11445147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 2322729 - 2322646
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||||||||||||  ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  2322729 ctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 2322646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 4811406 - 4811532
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||  |||| || ||||| |  ||     
T  4811406 ctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtttcatttttcgtcttaccccccatttt-attctt 4811504  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||| ||||  |||||||||    
T  4811505 caaaaacgcagataaataacagttttag 4811532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 23074030 - 23074096
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacattttt 153  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  23074030 ggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 1149496 - 1149553
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaatt 144  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  1149496 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 18296198 - 18296262
Alignment:
Q  109 tgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| |||||    
T  18296198 tgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgttgcatttttcgtcctacc 18296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 29033465 - 29033537
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgca 159  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  29033465 ggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgca 29033537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 3835238 - 3835145
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||||||  |||||||||  |||||||||||||||||  |||||| ||||| ||||||||| ||||||||||| ||||| || |||||    
T  3835238 cctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggcatttttcgtcctaccccccatttt 3835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 29035150 - 29035071
Alignment:
Q  88 gcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    ||||||||||||||  |||  |||||||||||||||||||||||  |||||| | ||| |||||||||||||||||||||    
T  29035150 gcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttgcatttttcgt 29035071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 1149558 - 1149614
Alignment:
Q  186 actccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    |||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  1149558 actccagaaacacagagaaatagcagttttaggcgattttagacctacccctatgct 1149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 35163639 - 35163570
Alignment:
Q  149 tttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggc 219  Q
    ||||| ||||| |||| || ||||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaa-ctccaaaaacacagagaaatgacagttttaggc 35163570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 32836106 - 32836179
Alignment:
Q  161 ttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctaccc 235  Q
    |||| |||||||||||||||||||| ||||  |||| |||||||||| ||||||||| |  ||||||||||||||    
T  32836106 ttttagttctacctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctaccc 32836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 28473041 - 28472997
Alignment:
Q  198 cagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    |||| ||||| |||||||||| |||||||||||||||| ||||||    
T  28473041 cagaaaaatgacagttttagggggttttagacctacccatatgct 28472997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 19359650 - 19359495
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  19359650 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttggatttttcgtcctacctcctattttcaaa 19359551  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19359550 ctccagaaacgtagagaaatggcagttttaggcggttttagacctacccctatgct 19359495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 5818960 - 5819115
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||||||    
T  5818960 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcatttttcgtcttacctcctattttcaaa 5819059  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5819060 ctccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 5819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 8647952 - 8647797
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||| |||||||||||    
T  8647952 ggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcataccttctattttcaaa 8647853  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8647852 ctccataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 8647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 2864785 - 2864940
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  | || ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  2864785 ggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 2864884  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  2864885 ctccataaacgcagagaaatgacagttttaggcggttttagaactacccctatgct 2864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 8461445 - 8461290
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||    
T  8461445 ggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgctgcatttttcgtcatacctcctattttcaaa 8461346  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  8461345 ctccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 8461290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 18183001 - 18183156
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| | |    
T  18183001 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttttata 18183100  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  18183101 ccccagaaacgcagagaaatgacagttttaggcagttttaggcctacccctatgct 18183156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 24331593 - 24331747
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaaca--tttttgttgcatttttcgttctacctcctattttcaaac 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||| | ||| |||||||||||||||    
T  24331593 ctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgttgcatttttcatcctagctcctattttcaaac 24331692  T
Q  188 tccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24331693 tccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 24331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 29454771 - 29454926
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  29454771 ggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttgctgcatttttcgtcctacctcctattttcaaa 29454870  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  29454871 ctccagaaacgcagagaaatgatagttttaggcggttttagacctacccatatgct 29454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 14215276 - 14215425
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||  | ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  14215276 tactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttgcatttttcgtcctacctcctattttcaaactcc 14215375  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatg 240  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14215376 agaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 14215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 89 - 242
Target Start/End: Original strand, 164224 - 164376
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||    
T  164224 cctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gttgcatttttcgtcctacctcctattttcaaact 164322  T
Q  189 ccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| ||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  164323 ccagaaacgcagagaaatgacaattttatgcggttttagacctacccctatgct 164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 25000603 - 25000448
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||| ||  ||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  25000603 ggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttgttgcatttttcgtcccacctcctattttcaaa 25000504  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  25000503 ctccaaaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 25000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 15709482 - 15709335
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| |||||  ||| |||||||| |||||||||||||||||||||| | ||| ||||| ||||||||||||||| ||||||||||||||||||    
T  15709482 ggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgttgcatttttcgtcctacctcctattttcaaa 15709384  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctaccc 235  Q
    ||||| || |||||||||||| |||||||||||||||||||||||||||    
T  15709383 ctccataagcgcagagaaatgacagttttaggcggttttagacctaccc 15709335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 16019097 - 16018946
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||  |||||||| ||||||||| |||| |||| ||| ||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||    
T  16019097 tactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgtatttttcgtcctacctcctatttttaaactcc 16018998  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  16018997 agaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 16018946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 15371918 - 15372060
Alignment:
Q  104 ggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagaga 203  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||| | |||||||||||    
T  15371918 ggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcccacctcctatttgcaaactctagaaacgcagaga 15372017  T
Q  204 aatggcagtt----ttaggcggttttagacctacccctatgct 242  Q
    ||||  ||||    ||||||||||||||||||||| |||||||    
T  15372018 aatgatagttttaattaggcggttttagacctacctctatgct 15372060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 24361868 - 24362022
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||| |||||||| | || ||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||||| ||||| || ||||| |      
T  24361868 ggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatttttcgtcctaccccccatttt-att 24361966  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  24361967 ctccacaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 24362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 2865269 - 2865140
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| || ||||| |      
T  2865269 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctaccccccatttt-att 2865171  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||| ||||||||| |||||||||    
T  2865170 ctccaaaaacgtagagaaatgacagttttag 2865140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 5819443 - 5819314
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  5819443 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 5819345  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||| ||||||| |||||||||    
T  5819344 ctccaaaaacgcaaagaaatgacagttttag 5819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 8647469 - 8647598
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  8647469 ggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 8647567  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  8647568 ctccaaaaacgcagagaaatgacagttttag 8647598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 15372387 - 15372258
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| ||| ||||| |      
T  15372387 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcattttttgttctacatcccatttt-att 15372289  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
     |||||||||||||||||||| |||||||||    
T  15372288 ttccaaaaacgcagagaaatgacagttttag 15372258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 18183483 - 18183354
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||  ||| |      
T  18183483 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc-cctcattttatt 18183385  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||  |||||||||    
T  18183384 ctccaaaaacgcagagaaataacagttttag 18183354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 19359167 - 19359292
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  19359167 ggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 19359265  T
Q  187 ctccaaaaacgcagagaaatggcagtt 213  Q
    ||||||||||||||||||||| |||||    
T  19359266 ctccaaaaacgcagagaaatgacagtt 19359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 24362350 - 24362221
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||| || ||||| |      
T  24362350 ggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttgcatttttcgtcctaccccccatttt-att 24362252  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  24362251 ctccaaaaacgcagagaaatgacagttttag 24362221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 29455253 - 29455127
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  |||    
T  29455253 ctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctc 29455155  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    |||||||| ||||||||| |||||||||    
T  29455154 caaaaacgtagagaaatgacagttttag 29455127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 8460961 - 8461090
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||  |||| || ||||| |      
T  8460961 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcataccccccatttt-att 8461059  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||| ||||||||||| |||||||||    
T  8461060 ctccaaaaatgcagagaaatgacagttttag 8461090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 24325243 - 24325397
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||| |||||||| | || ||||||| ||||||||||||||| |||||||||| || ||||||||| ||||||||||| ||||| || ||||| |      
T  24325243 ggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatttttcgtcctaccccccatttt-att 24325341  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  24325342 ctccacaaacgcagagaaatgatagttttagccggttttagacctacccctatgct 24325397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 15709002 - 15709130
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| || ||||| |      
T  15709002 ggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatatttcgtcctacc-cccatttt-att 15709099  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  15709100 ctccaaaaacgcagagaaatgacagttttag 15709130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 14215755 - 14215628
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||  || | || ||||| |  ||    
T  14215755 cctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcttaacccccatttt-attct 14215657  T
Q  189 ccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||| ||||||||| |||||||||    
T  14215656 ccaaaaacgtagagaaatgacagttttag 14215628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 164705 - 164576
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||| |||||| |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| || ||||| |      
T  164705 ggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccatttt-att 164607  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||| | ||||||||| |||||||||    
T  164606 ctccaaaaatgtagagaaatgacagttttag 164576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 14464034 - 14463906
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||||||||   |  || |||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||| ||||| || ||||| |      
T  14464034 ggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttattgcatttttcgtcctacc-ccaatttt-att 14463937  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  14463936 ctccaaaaacgcagagaaatgacagttttag 14463906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 25000121 - 25000250
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||||||   |||| |||||| ||||||||||| |||| ||||||| ||||| ||||||| |||||||||| || ||||| || ||||| |      
T  25000121 ggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctaccccccatttt-att 25000219  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||| ||||||||| |||||||||    
T  25000220 ctccaaaaacgtagagaaatgacagttttag 25000250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 24332073 - 24331945
Alignment:
Q  91 tactcacgaaaccggtcctgccctttt-aaaacagaacaaaacggtccttcaattaacattttt-gttgcattttt-cgttctacctcctattttcaaac 187  Q
    |||||||||||| | ||||||| |||| ||||||||||||||||||||| |||||| ||||||| ||||||||||| ||| ||||| || ||| | |  |    
T  24332073 tactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgttgcattttttcgtcctaccccccattct-attc 24331975  T
Q  188 tccaaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||||||||| |||||||||    
T  24331974 tccaaaaacgcagagaaatgacagttttag 24331945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 10721884 - 10721967
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctat 239  Q
    ||||| |||| || ||||||||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  10721884 ttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctacccctat 10721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 14462686 - 14462770
Alignment:
Q  138 ttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc----caaaaacgcagagaaatggcagttttagg 218  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||    || ||||| ||||||||| ||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttagg 14462770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 6019282 - 6019189
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcat-ttttcgttctacctcctatttt 182  Q
    ||||||||||||| | || ||| |||||||||||||||||||| ||| || ||||| |||||||||||||| ||||||| |||||||| |||||    
T  6019282 ctactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcattttttcgtcctacctcccatttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 7348593 - 7348685
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    ||||||||||||  |||| ||||||||||||||||||||||||  ||||||  ||| ||||||||||||| ||||||| ||||| || |||||    
T  7348593 ctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgttgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 27307174 - 27307238
Alignment:
Q  170 tacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctaccc 235  Q
    |||||||||||||||| ||||| ||||||| ||||||| ||||||||||| |||||||||||||||    
T  27307174 tacctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctaccc 27307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 4222230 - 4222150
Alignment:
Q  93 ctcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||||||||  |||| |||||||||||||||||||||||  ||| |||| ||| ||||||| ||||||||||||| |||||    
T  4222230 ctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattgcatttttcgtcctacc 4222150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 7349528 - 7349436
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    ||||||||||||  |||||||| ||||||||||| ||||||||  ||||||| ||| ||||||||||||| ||||| | ||||| || |||||    
T  7349528 ctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttgcacttttcatcctaccccccatttt 7349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 4623183 - 4623265
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||||||||||  |||||||||  |||||||||||||||||  |||||||||||| ||||||| | ||||||| ||| |||||    
T  4623183 tactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttatggcattttccgtcctacc 4623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 6018348 - 6018441
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttca 184  Q
    ||||||||||||| |||| || ||||||||||||||||||||   | ||||||||| ||||||||||||| |||| || |||||  |||||||||    
T  6018348 ctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgttgcagttttagtcctaccctctattttca 6018441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 16018620 - 16018705
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||||| ||||||||  | || ||||||||||||| |||||||||||||||||||||| | |||||| ||||||||| ||| |||||    
T  16018620 ggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaatt-atatttttattgcattttccgtcctacc 16018705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 28494942 - 28495029
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctacc-cctatgct 242  Q
    ||||| |||| || ||||||||||||||||| ||||| |||||||||||| || || |||||||  |||||||||||||| ||||||||    
T  28494942 ttgcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaagtgacaattttaggtagttttagacctaccacctatgct 28495029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 16752998 - 16752938
Alignment:
Q  173 ctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctaccc 235  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||| | |||||||||||||    
T  16752998 ctcctattttcaa-ctccagaaacgcagaaaaatggcagttttaggcag-tttagacctaccc 16752938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 4219711 - 4219780
Alignment:
Q  104 ggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||| |||| |||||||||||||||||   |||||| | ||| ||||||||||||||||||||| |||||    
T  4219711 ggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgcatttttcgtcctacc 4219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 4624737 - 4624644
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||||||  |||| || |  ||||||||| ||||||||  || |||||||| ||||| ||||||||||||||| ||||| || |||||    
T  4624737 cctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctaccccccatttt 4624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 242
Target Start/End: Original strand, 14463732 - 14463763
Alignment:
Q  211 gttttaggcggttttagacctacccctatgct 242  Q
    ||||||||||||||||||||||||||||||||    
T  14463732 gttttaggcggttttagacctacccctatgct 14463763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 41834511 - 41834430
Alignment:
Q  150 ttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagaccta 232  Q
    |||| ||||| |||| || ||||||||||||||||| |||   ||||||||||||||| ||||||||| |  |||||||||||    
T  41834511 tttttttgcagttttagtcctacctcctattttcaa-ctcttgaaacgcagagaaatgacagttttagacaattttagaccta 41834430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 37727444 - 37727289
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  37727444 ggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 37727345  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37727344 ctccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 37727289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 4275878 - 4275723
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  4275878 ggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 4275779  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4275778 ctccataaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 4275723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 20841075 - 20840920
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  20841075 ggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 20840976  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  20840975 ctccataaacgcagagaaatggcagttttaggcggttttagatatacccctatgct 20840920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 39555609 - 39555757
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39555609 ggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaa 39555708  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctaccc 235  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  39555709 ctccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 25853265 - 25853420
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25853265 ggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaa 25853364  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  25853365 ctccagaaacgcagagaaataacagttttaggcggttttagacctatccctatgct 25853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 22424846 - 22425000
Alignment:
Q  88 gcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaac 187  Q
    ||||||| ||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  22424846 gcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaac 22424945  T
Q  188 tccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  22424946 tccagaaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 22425000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 31778687 - 31778839
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  31778687 ctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgttgcatttttcgtcctacctcctattttcaaactc 31778786  T
Q  190 caaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || ||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  31778787 cagaaacgcagagaaatgacagttttaggcggttttagacctacccgtatgct 31778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 29801930 - 29801775
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  29801930 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcatttttcgtcccacctcctattttcaaa 29801831  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| || |||||| |||||||||||||||| |||||||    
T  29801830 ctccagaaacgcagagaaatgacaattttagacggttttagacctacctctatgct 29801775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 43973954 - 43973799
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| |    
T  43973954 ggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacctcctattttcata 43973855  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  43973854 ccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 43973799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 89 - 242
Target Start/End: Original strand, 27393694 - 27393847
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||     
T  27393694 cctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccctattttcaaacc 27393793  T
Q  189 ccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  27393794 ccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 27393847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 41047212 - 41047060
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||| ||| ||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  41047212 ggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 41047114  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatg 240  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41047113 ctccagaaacgcagagaaatggcagttttaggcggttttagacctacccatatg 41047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 17464522 - 17464677
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||| || |||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  17464522 ggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 17464621  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||| | ||||||| |||||||||||||| |||||||||||||||||||    
T  17464622 ctccagaaacgtaaagaaatgacagttttaggcggtgttagacctacccctatgct 17464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 26837391 - 26837538
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  ||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  26837391 ggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 26837490  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacc 234  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  26837491 ctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 26274601 - 26274753
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  26274601 ctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcatacctcctattttcaaactc 26274700  T
Q  190 caaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || ||||||||  ||||| ||||||||||| |||||||||||||  |||||||    
T  26274701 cagaaacgcagttaaatgacagttttaggcagttttagacctacgtctatgct 26274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 5137495 - 5137340
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| ||||| ||| |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| || ||| ||||||||||||||    
T  5137495 ggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttagtcctatctcctattttcaaa 5137396  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  5137395 ctccagaaacgcagagaaatgacagttttaggcggttttagacctacccccatgct 5137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 23644979 - 23644823
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  23644979 ggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcatcctacctcctattttcaaa 23644880  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacct-acccctatgct 242  Q
    ||| |  |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  23644879 ctctagtaacgcagagaaatgacagttttaggcggttttagacctaacccctatgct 23644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 94 - 242
Target Start/End: Original strand, 24300594 - 24300742
Alignment:
Q  94 tcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaa 193  Q
    ||||||||| ||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||| |    
T  24300594 tcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgcaattttcgtcccacctcctattttcaaactccaga 24300693  T
Q  194 aacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  24300694 aacgcagagaaatgacagttttaggcggttttagacctacccatatgct 24300742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 32534994 - 32535145
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||     
T  32534994 tactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactct 32535093  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | || | |||||||||| |||||||||||||||||| |||| ||||||||||    
T  32535094 agaatcacagagaaatgacagttttaggcggttttataccttcccctatgct 32535145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 240
Target Start/End: Complemental strand, 30098273 - 30098121
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |    
T  30098273 tactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaacttc 30098174  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttag---acctacccctatg 240  Q
    | ||||||||||| ||| |||||||||||||||||||   |||||||||||||    
T  30098173 agaaacgcagagatatgacagttttaggcggttttagatcacctacccctatg 30098121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 31779166 - 31779037
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| || ||||| |      
T  31779166 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcccaccccccatttt-att 31779068  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  31779067 ctccaaaaacgcagagaaatgtcagttttag 31779037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 39556091 - 39555962
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| ||||| || ||||| |      
T  39556091 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgcatttttcgtcctaccccccatttt-att 39555993  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  39555992 ctccaaaaacgcagagaaatgacagttttag 39555962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 48453020 - 48453144
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  48453020 ggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 48453118  T
Q  187 ctccaaaaacgcagagaaatggcagt 212  Q
    ||||||||||||||||||||| ||||    
T  48453119 ctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 5137011 - 5137140
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  5137011 ggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 5137109  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  5137110 ctccaaaaacgcagagaaatgacagttttag 5137140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 41046731 - 41046860
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  41046731 ggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 41046829  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  41046830 ctccaaaaacgcagagaaatgacagttttag 41046860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 20840591 - 20840720
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  20840591 ggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 20840689  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||  ||||||||||||||| |||||||||    
T  20840690 ctccttaaacgcagagaaatgacagttttag 20840720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 37726969 - 37727089
Alignment:
Q  96 acgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaa 195  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  |||||||||    
T  37726969 acgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaa 37727067  T
Q  196 cgcagagaaatggcagttttag 217  Q
    |||||||||||| |||||||||    
T  37727068 cgcagagaaatgacagttttag 37727089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 23644493 - 23644611
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  23644493 ggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 23644591  T
Q  187 ctccaaaaacgcagagaaat 206  Q
    ||||||||||||||||||||    
T  23644592 ctccaaaaacgcagagaaat 23644611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 24301070 - 24300941
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  ||||||||| |||||||||| |||||||||||||||| | || ||||||||||||||||||||| ||||| || ||||| |      
T  24301070 ggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttgcatttttcgtcctaccccccatttt-att 24300972  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  24300971 ctccaaaaacgcagagaaatgacagttttag 24300941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 22425327 - 22425209
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||| | |||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  22425327 ggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 22425229  T
Q  187 ctccaaaaacgcagagaaat 206  Q
    ||||||||||||||||||||    
T  22425228 ctccaaaaacgcagagaaat 22425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 25853738 - 25853612
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||| || | |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  |||    
T  25853738 ctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctc 25853640  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||||||  |||||||||    
T  25853639 caaaaacgcagagaaataacagttttag 25853612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 32535477 - 32535344
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaatta-----acatttttgttgcatttttcgttctacctcctattt 181  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     | |||||||||||||||||||| ||||| || ||||    
T  32535477 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatttttgttgcatttttcgtcctacc-cccattt 32535379  T
Q  182 tcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    | |  |||||||||||||||||||||  ||||||||    
T  32535378 t-attctccaaaaacgcagagaaatgatagttttag 32535344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 27394091 - 27393962
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| | | ||||| || ||||| |      
T  27394091 ggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttgttgcattttccatcctacccccaatttt-att 27393993  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||  |||||||||    
T  27393992 ctccaaaaacgcagagaaataacagttttag 27393962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 26275078 - 26274952
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||| ||||| || ||||| |  ||    
T  26275078 cctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt-attct 26274981  T
Q  189 ccaaaaacgcagagaaatggcagttttag 217  Q
    |||||| |||||||||||| |||||||||    
T  26274980 ccaaaaccgcagagaaatgacagttttag 26274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 43973494 - 43973601
Alignment:
Q  109 tgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatgg 208  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  ||||||||||||||| ||||      
T  43973494 tgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagataaataa 43973592  T
Q  209 cagttttag 217  Q
    |||||||||    
T  43973593 cagttttag 43973601  T

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Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 29801391 - 29801467
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  29801391 tactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgt 29801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 30104515 - 30104641
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||||  |||||||||||||||||||| || | |||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |   |    
T  30104515 cctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttgcatttttcgtcctacc-cccatttt-attat 30104612  T
Q  189 ccaaaaacgcagagaaatggcagttttag 217  Q
    | ||||||||||||||||| |||||||||    
T  30104613 ctaaaaacgcagagaaatgacagttttag 30104641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 26837869 - 26837741
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||| ||||||| ||| ||||||||| |||| |||||||||||||| ||||| || |||||||||||||||||| || ||||| || ||||| |      
T  26837869 ggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttgcattttttgtcctaccccccatttt-att 26837772  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||| ||||||||||| |||||||||    
T  26837771 ctccaaaaatgcagagaaatgacagttttag 26837741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 25612489 - 25612396
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||||||  |||||||||||||||||| |||||||||| ||| || ||||| ||||||||||||||||||||| ||||| || |||||    
T  25612489 cctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgcatttttcgtcctaccccccatttt 25612396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 17464982 - 17464876
Alignment:
Q  111 cccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttc-gttctacctcctattttcaaactccaaaaacgcagagaaatggc 209  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  || ||||| || ||||| |  ||||||||| ||||||||||| |    
T  17464982 cccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcatttttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgac 17464884  T
Q  210 agttttag 217  Q
    ||||||||    
T  17464883 agttttag 17464876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 23228521 - 23228427
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||||||||  | || |||||||||||||| ||||||||  |||||||||||| ||||||| ||||||||||||| |||||||| |||||    
T  23228521 ggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttattgcatttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 51474844 - 51474737
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||  |||| ||||||||||||||| |||||||  |||||| | ||| ||||||||||||||||||||| ||||| || ||||| |  ||||    
T  51474844 tactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgttgcatttttcgtcctacccccaatttttatcctcc 51474745  T
Q  191 aaaaacgc 198  Q
    ||||||||    
T  51474744 aaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 32697213 - 32697128
Alignment:
Q  88 gcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    ||||||||||||||   |||  ||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||| |||||    
T  32697213 gcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttgcatttttcgtcctacc 32697128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 50116919 - 50116828
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||||  |||| ||||||||| ||| |||||||||||||| |||| ||| ||||||||||||| ||||||| ||||| || |||||    
T  50116919 tactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgcaattttcgtcctaccccccatttt 50116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 18010256 - 18010179
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    ||||||||||||  ||| | ||||||||||||||||||||||  ||  |||||||| |||||||||||||||||||||    
T  18010256 ctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgt 18010179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 26671721 - 26671677
Alignment:
Q  38 tattttaaattctatattagtgaaattaaactagaagcaatttat 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  26671721 tattttaaattctatatcagtgaaattaaactagaagcaatttat 26671677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 51473466 - 51473536
Alignment:
Q  94 tcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcattttt 164  Q
    ||||||||  ||||||||||||||||||||||||||||  |||||||  ||| ||||||||||||| ||||    
T  51473466 tcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttgcactttt 51473536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 45965988 - 45966053
Alignment:
Q  106 tcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttcta 171  Q
    |||||| ||||||||||| |||||||  ||||||| |||| ||||| |||||||||||||||||||    
T  45965988 tcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgttgcatttttcgttcta 45966053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 8873804 - 8873869
Alignment:
Q  170 tacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctacccc 236  Q
    |||||||||||||||| || || ||||||||||||||| |||||||||||  |||| ||||||||||    
T  8873804 tacctcctattttcaa-cttcagaaacgcagagaaatgacagttttaggcaattttggacctacccc 8873869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 25420653 - 25420575
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    |||||||||||||  | ||  |||||||||||| |||| ||||  ||||||||||||  ||||||||||||||||||||    
T  25420653 cctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttgcatttttcgt 25420575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 26671745 - 26671711
Alignment:
Q  1 tcctaatagtgtaggtacttttcatattttaaatt 35  Q
    |||||||||||||||||||||||||||||||||||    
T  26671745 tcctaatagtgtaggtacttttcatattttaaatt 26671711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 37220588 - 37220674
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    ||||||||||| | | || || ||| |||||||||||||| ||||  |||||||| ||| ||||||||||||| ||||||| |||||    
T  37220588 ggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttgttgcacttttcgtcctacc 37220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 37076107 - 37076034
Alignment:
Q  170 tacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagaccta-cccctatgct 242  Q
    ||||| |||||||  ||||| | ||||| ||||||||||||||||||||| ||||||||| || ||||||||||    
T  37076107 taccttctattttttaactctagaaacgtagagaaatggcagttttaggcagttttagacttatcccctatgct 37076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 55192230 - 55192277
Alignment:
Q  169 ctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  55192230 ctacctcctattttcaa-ctccagaaacgcagagaaatgacagttttag 55192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 25419179 - 25419242
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtcc-ttcaattaacattttt 153  Q
    |||||||||||   || ||||||||||||||||||||||||| |||| |||||||| |||||||    
T  25419179 tactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 49407909 - 49407955
Alignment:
Q  170 tacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||    
T  49407909 tacctcctattttcaa-ctccaaaaacgcagagaaatgacaattttag 49407955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 50900645 - 50900710
Alignment:
Q  169 ctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctaccc 235  Q
    |||||| |||||||||| ||| | ||||  ||||||||| ||||||||||| |||||||||||||||    
T  50900645 ctaccttctattttcaa-ctctagaaacatagagaaatgacagttttaggcagttttagacctaccc 50900710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 50900975 - 50900914
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||| |||| || ||||||||||||||| ||||||| ||||||| |||||| ||||||||||    
T  50900975 ttgcagtttttgtcctacctcctattttc-aactccataaacgcaaagaaattgcagttttag 50900914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 2323477 - 2323553
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagaccta 232  Q
    ||||| |||| || ||||||||||||||||| ||||| |||| | || ||||| |||||||||||  |||||||||||    
T  2323477 ttgcaattttagtcctacctcctattttcaa-ctccagaaacacggataaatgacagttttaggcaattttagaccta 2323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 37222083 - 37222030
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaa 142  Q
    ||||||||| |||  ||||||||| |||||||||||||||||||  ||||||||    
T  37222083 cctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 37075781 - 37075848
Alignment:
Q  149 tttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||| ||||| |||| || ||||||| ||||||||| ||||| ||||||||||||||| | |||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaa-ctccagaaacgcagagaaatgaccgttttag 37075848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 22434214 - 22434365
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  22434214 tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgtatttttcgtcctacctcctattttcaaactcc 22434313  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22434314 agaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 22434365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 45082934 - 45082783
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||     
T  45082934 tactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactct 45082835  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45082834 agaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 45082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 15523266 - 15523421
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||||||    
T  15523266 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttttgcatttttcgtcctacctcctattttcaaa 15523365  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  15523366 ctctagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 15523421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 23494957 - 23494802
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||    
T  23494957 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctattctcaaa 23494858  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||| | |||||||||| |||||||||||||||||||||||||||||||    
T  23494857 ctccagaaacgtaaagaaatggcaattttaggcggttttagacctacccctatgct 23494802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 25447278 - 25447433
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  25447278 ggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 25447377  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||||||| ||||||    
T  25447378 ctccataaacgcagagaaatgacaattttaggcagttttagacctacccatatgct 25447433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 46193436 - 46193591
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  46193436 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 46193535  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  46193536 ctccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 46193591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 12234843 - 12234688
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  12234843 ggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 12234744  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  12234743 ccccagaaatgcagagaaatgacagttttaggcagttttagacctacccctatgct 12234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 20471025 - 20470870
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||| ||||||| |||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  20471025 ggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 20470926  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  20470925 ctccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatgct 20470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 90 - 237
Target Start/End: Complemental strand, 48526692 - 48526545
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||    
T  48526692 ctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgcatttttcgtcctacctcctattttcaaactc 48526593  T
Q  190 caaaaacgcagagaaatggcagttttaggcggttttagacctacccct 237  Q
    || |||| |||||||||| |||||||||||||||||||||||||||||    
T  48526592 cataaacacagagaaatgacagttttaggcggttttagacctacccct 48526545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 51021309 - 51021155
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||||||||||    
T  51021309 ggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt-gttgcatttttcgtcctacctcctattttcaaa 51021211  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51021210 ctccagaaacgcagagaaatggcaattttaggcggttttagacctacccctatgct 51021155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 54995100 - 54995255
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  54995100 ggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 54995199  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||| | ||||||||| ||||||||||||||||||||||||||| ||||||    
T  54995200 ctccagaaatgtagagaaatgacagttttaggcggttttagacctacccttatgct 54995255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 4220073 - 4219918
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | |||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  4220073 ggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 4219974  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || |||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  4219973 cttcaaaaacgcagagaaataacagttttaggcggttttagacccacccctatgct 4219918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 11153177 - 11153332
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||| |||  |||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  11153177 ggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 11153276  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11153277 ccccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 11153332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 18751630 - 18751785
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||  |||| |||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||    
T  18751630 ggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgcatttttcgtcccacctcctattttcaaa 18751729  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  18751730 ctccagaaacgcagaaaaatggcagttttaggcggttttagacttacccctatgct 18751785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 25938185 - 25938030
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  25938185 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgcattttttgtcctacctcctattttcaaa 25938086  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||| || |||||||||||||||| ||||||||||||||||| |||||||    
T  25938085 ctccagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 25938030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 2118324 - 2118480
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||||||||||||||||||| |||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  2118324 ggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 2118423  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctac-ccctatgct 242  Q
    || || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  2118424 cttcagaaacgcagagaaattgcagttttaggcggttttagacctactccctatgct 2118480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 12503471 - 12503622
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| | ||| ||| ||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  12503471 tactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcc 12503570  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  12503571 agaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 12503622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 33109719 - 33109844
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  ||||    
T  33109719 tactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctcc 33109817  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||| |||||||||    
T  33109818 aaaaacgcagagaaatgacagttttag 33109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 25447750 - 25447621
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||  | ||||| |      
T  25447750 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcatttttcgtcctaccctccatttt-att 25447652  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||  |||||||||    
T  25447651 ctccaaaaacgcagagaaattacagttttag 25447621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 88 - 217
Target Start/End: Original strand, 25937702 - 25937830
Alignment:
Q  88 gcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaac 187  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||  | || ||||| |  |    
T  25937702 gcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctgtcccccatttt-attc 25937800  T
Q  188 tccaaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||||||||| |||||||||    
T  25937801 tccaaaaacgcagagaaatgacagttttag 25937830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 38962326 - 38962204
Alignment:
Q  94 tcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaa 193  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  || ||||    
T  38962326 tcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attcttcaaa 38962228  T
Q  194 aacgcagagaaatggcagttttag 217  Q
    |||||||||||||| |||||||||    
T  38962227 aacgcagagaaatgacagttttag 38962204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 11153661 - 11153532
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||  | ||||| |      
T  11153661 ggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgcatttttcgtcctaccctccatttt-att 11153563  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||  |||||||||    
T  11153562 ctccaaaaacgcagagaaataacagttttag 11153532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 12234367 - 12234488
Alignment:
Q  94 tcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaa 193  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| || ||||| |  |||||||    
T  12234367 tcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaa 12234465  T
Q  194 aacgcagagaaatggcagtttta 216  Q
    |||||||||||||  ||||||||    
T  12234466 aacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 23494474 - 23494603
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||| || ||||| |      
T  23494474 ggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgcatttttcgtcctaccccccatttt-att 23494572  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||| ||||||||||||| |||||||||    
T  23494573 ctccaaacacgcagagaaatgacagttttag 23494603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 46193919 - 46193790
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| || ||||| |      
T  46193919 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctaccccccatttt-att 46193821  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||| |||||| || |||||||||    
T  46193820 ctccaaaaacgtagagaattgacagttttag 46193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 4219588 - 4219716
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||| | |||||||| |||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  4219588 ggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 4219686  T
Q  187 ctccaaaaacgcagagaaatggcagtttta 216  Q
    ||||||||||||||||||||| ||||||||    
T  4219687 ctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 15523745 - 15523619
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||| ||||| || ||||| |  |||    
T  15523745 ctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttgttgcatttttcgtcctaccccccatttt-attctc 15523647  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    |||||||||| ||||||| |||||||||    
T  15523646 caaaaacgcaaagaaatgacagttttag 15523619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 33109978 - 33109883
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    ||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  33109978 ggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 22434690 - 22434563
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  22434690 ggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacc-cccatttt-att 22434594  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  22434593 ctccaaaaacgcagagaaatgacagttttag 22434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 48526229 - 48526355
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||| ||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  ||    
T  48526229 cctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc-cccatttt-attct 48526326  T
Q  189 ccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||| ||||||||||| |||||||||    
T  48526327 ccaaaaatgcagagaaatgacagttttag 48526355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 51020835 - 51020957
Alignment:
Q  94 tcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaa 193  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| || ||||| |  || ||||    
T  51020835 tcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attcttcaaa 51020933  T
Q  194 aacgcagagaaatggcagttttag 217  Q
    |||| ||||||||| |||||||||    
T  51020934 aacgtagagaaatgacagttttag 51020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 22170433 - 22170322
Alignment:
Q  105 gtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaa 204  Q
    |||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||| || ||||| |  ||||||||||||||||||    
T  22170433 gtcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaa 22170335  T
Q  205 atggcagttttag 217  Q
    ||| |||||||||    
T  22170334 atgacagttttag 22170322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 45082484 - 45082590
Alignment:
Q  109 tgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatgg 208  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  |||||||||| ||||||||||     
T  45082484 tgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacacagagaaatga 45082581  T
Q  209 cagttttag 217  Q
    || ||||||    
T  45082582 caattttag 45082590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 2118809 - 2118692
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||| |||| ||||| ||||||  |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  2118809 ggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacc-cccatttt-att 2118712  T
Q  187 ctccaaaaacgcagagaaat 206  Q
    ||||||||||||||||||||    
T  2118711 ctccaaaaacgcagagaaat 2118692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 20958373 - 20958296
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcattttt 164  Q
    |||||||||||||||  |||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||    
T  20958373 ggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgcattttt 20958296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 18764034 - 18763954
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    |||||||||||||||| |||| || |||||||||||||||||||| |||| ||||| || |||||||||||||||||||||    
T  18764034 ggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttgcatttttcgt 18763954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 35363115 - 35363028
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaa-caaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||||||||||||||| ||| |||| ||||||||| | || |||||||||| |||||||| |||||||||||||||||||||||||||    
T  35363115 ggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttgttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 43243794 - 43243708
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||||||||||||||  |||| |||||||||||||||||||||||  || ||||||||| |||||||||||||||||| || |||||    
T  43243794 ggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 54995581 - 54995453
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | || ||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| ||| | || ||||| |      
T  54995581 ggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgcatttttcgtcctaacccccatttt-att 54995484  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||| ||||||||| |||||||  ||||||||    
T  54995483 ctctaaaaacgcaaagaaatgatagttttag 54995453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 12503913 - 12503821
Alignment:
Q  124 gaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||| || |||||||||||||||||||||  |||| || ||||| |  ||||||||||||||||||||| |||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 12503821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 43242328 - 43242396
Alignment:
Q  114 ttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||||| |||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 48713859 - 48713780
Alignment:
Q  88 gcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    ||||||||| ||||  |||| ||| |||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  48713859 gcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgt 48713780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 16690970 - 16691062
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    ||||||||||||  |||||||||  ||||||||| |||||||   ||||||||||| ||||||||||||||||||||| ||||| || |||||    
T  16690970 ctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgcatttttcgtcctacccccgatttt 16691062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 44892660 - 44892576
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||||||||||||  ||| ||||| ||||||||||||||||||| ||| ||||||||   ||||||||||||||||||| |||||    
T  44892660 cctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgcatttttcgtcctacc 44892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 48708345 - 48708401
Alignment:
Q  106 tcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcattt 162  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  48708345 tcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 43281304 - 43281210
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||||||||  |||| |||| ||||||||||||||||||  || |||||||| | |||||||||||||||||||| ||||| || |||||    
T  43281304 ggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaatt-atatttttgttgcatttttcgtcctaccccccatttt 43281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 10258401 - 10258304
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttca 184  Q
    |||||||||| ||||  ||||||||||||||||||||||  ||||  ||  |||||||| ||||||||||||| |||| ||  |||| ||||||||||    
T  10258401 ggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttgttgcagttttagtcttaccccctattttca 10258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 44220861 - 44220781
Alignment:
Q  117 taaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgc 198  Q
    |||||||||||||||  |||||||| ||| |||||||||| |||||||||||||||| |||| ||| |  ||||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacc-cctaattttatcctccaaaaacgc 44220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 20957224 - 20957300
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    |||||||||||  |||| | | ||||||||||| |||||||  |||||||||||| || ||||||||||||||||||    
T  20957224 tactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcatttttcgt 20957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 48295054 - 48294979
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttc 165  Q
    ||||||||||||  |||| ||||  ||||||||| |||||||  ||| |||||||| |||||||||||||||||||    
T  48295054 ctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttgcatttttc 48294979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 16691583 - 16691491
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||||||  |||||||||  |||||| || |||||||  |||||| |||||  ||||||||||||||||||||  ||||||| |||||    
T  16691583 cctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgttgcatttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 44890550 - 44890626
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttc 165  Q
    |||| ||||||||  |||| |||||||||||||||||||||||   ||||| |||||   |||||||||||||||||    
T  44890550 cctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgttgcatttttc 44890626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 40160523 - 40160465
Alignment:
Q  170 tacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagac 229  Q
    |||||||||||||||| ||||| ||||| |||||||  |||||||||||| |||||||||    
T  40160523 tacctcctattttcaa-ctccagaaacgtagagaaaatgcagttttaggcagttttagac 40160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 10795730 - 10795692
Alignment:
Q  198 cagagaaatggcagttttaggcggttttagacctacccc 236  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  10795730 cagagaaatgacagttttaggcagttttagacctacccc 10795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 17504072 - 17504133
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||| |||| || ||||||||||||||| ||||||| ||||| ||||||||| |||||||||    
T  17504072 ttgcagttttagtcctacctcctattttc-aactccagaaacgtagagaaatgacagttttag 17504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 17504407 - 17504345
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||| |||| || ||||||||||||||  ||||| | ||||||||||||||| |||||||||    
T  17504407 ttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagttttag 17504345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 48293629 - 48293703
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttc 165  Q
    |||||||||||  | ||||| |  ||||||||| |||||||  || ||||||||| |||||||||||||||||||    
T  48293629 tactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgttgcatttttc 48293703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 35193735 - 35193672
Alignment:
Q  170 tacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctaccc 235  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||| || |||  ||||||||||    
T  35193735 tacctcctattttcaa-ctccagaaacgcagagaa-tggcagttttaagcagttacagacctaccc 35193672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 7446856 - 7446705
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  7446856 tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcc 7446757  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  7446756 aaaaacgcagagaaatgacagttttaggcggttttagacctactcatatgct 7446705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 18450861 - 18451016
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||    
T  18450861 ggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatttttagtcctacctcctattttcaaa 18450960  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18450961 ctccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 18451016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 43058846 - 43058692
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  43058846 ggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcatttt-gttgcatttttcgtcctacctcctattttcaaa 43058748  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43058747 ctccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 43058692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 40027654 - 40027501
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  40027654 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 40027555  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatg 240  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  40027554 ctccataaacgcagtgaaatggcagttttaggcggttttagacctacccatatg 40027501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 40815376 - 40815531
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  40815376 ggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgcatttttcgtcctacctcctatttttaaa 40815475  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40815476 ctccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 40815531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 239866 - 239711
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||  |||||||||||||||||    
T  239866 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgtttttcgtcatacctcctattttcaaa 239767  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  239766 ctccagaaacgcagagaaatggcagttttaggcggttttagacctaactctatgct 239711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 22374839 - 22374684
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  22374839 ggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 22374740  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | ||| ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  22374739 ctctagaaatgcagagaaatgacagttttaggcggttttagaccttcccctatgct 22374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 28617128 - 28616973
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  28617128 ggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcttacctcctattttcaaa 28617029  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  28617028 ctccagaaacgcagagaaatagcagttttaggcgattttagacctacccctatgct 28616973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 1978623 - 1978468
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  1978623 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgcattttttgtcctacctcctattttcaaa 1978524  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | |||| || |||||||||||||||| ||||||||||||||||| |||||||    
T  1978523 ctctagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 1978468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 11091034 - 11090879
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||| ||||||||||||||    
T  11091034 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgttgtatttttcgtcctatctcctattttcaaa 11090935  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  11090934 ctccagaaacgcagataaatgacaattttaggcggttttagacctacccatatgct 11090879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 3025972 - 3025822
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||  ||| |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  3025972 tactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgcatttttcgtcctacctcctattttcaaactcc 3025874  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||| ||||||||||| |||||||| |||| ||||||||||||| ||||||    
T  3025873 agaaatgcagagaaatgacagttttaagcgggtttagacctacccatatgct 3025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 26538593 - 26538463
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || |||||||||    
T  26538593 ggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattttcaaa 26538494  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    | ||| ||||||||||||||| |||||||||    
T  26538493 ccccagaaacgcagagaaatgacagttttag 26538463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 8425386 - 8425533
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||| | || ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  8425386 ggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgcatttttcgtcctacctcctattttcaaa 8425484  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctaccc 235  Q
    ||||| ||| ||||||||||| |||||||| ||||||||||||||||||    
T  8425485 ctccagaaatgcagagaaatgacagttttaagcggttttagacctaccc 8425533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 14432655 - 14432500
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| ||||| |||| |||| ||||||||||||| |||| ||| |||||||||  |||||||||||||||||| | ||||||||||||||||||    
T  14432655 ggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgcatttttcatcctacctcctattttcaaa 14432556  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | ||||||||||||||| ||||||||||||  ||||||||||||| ||||||    
T  14432555 ctctagaaacgcagagaaatgacagttttaggcgaatttagacctacccttatgct 14432500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 11090552 - 11090681
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  11090552 ggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 11090650  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  11090651 ctccaaaaacgcagagaaatgacagttttag 11090681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 239384 - 239512
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  239384 ggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 239481  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  239482 ctccaaaaacgcagagaaatgacagttttag 239512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 1978139 - 1978268
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||  | || ||||| |      
T  1978139 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctgtcccccatttt-att 1978237  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  1978238 ctccaaaaacgcagagaaatgacagttttag 1978268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 22374351 - 22374480
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  22374351 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 22374449  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||| |||||||  ||||||||    
T  22374450 ctccaaaaacgcaaagaaatgatagttttag 22374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 40027171 - 40027300
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||  | ||||| |      
T  40027171 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccctccatttt-att 40027269  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  40027270 ctccaaaaacgcagagaaatgacagttttag 40027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 40815859 - 40815730
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  40815859 ggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 40815761  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  40815760 ctccaaaaacgcagagaaatgacagttttag 40815730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 43058364 - 43058493
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||| |      
T  43058364 ggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgttctaccccccatttt-att 43058462  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||| ||||||||| |||||||||    
T  43058463 ctccaaaaacgtagagaaatgacagttttag 43058493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 28616644 - 28616774
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| || |||||   |    
T  28616644 ggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcaattttcgtcctaccccccattttatta 28616743  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
      | |||||||||||||||| ||||||||||    
T  28616744 tccaaaaaacgcagagaaatagcagttttag 28616774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 8425871 - 8425745
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||  |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||  |||| || ||||| |  |||    
T  8425871 ctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgcatttttcgtcttacccccaatttt-attctc 8425773  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||||||| |||||||||    
T  8425772 caaaaacgcagagaaatgacagttttag 8425745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 3025497 - 3025625
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||| || ||||| |      
T  3025497 ggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcctacc-cccatttt-att 3025594  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||| ||||||||| ||||||| |||||||||    
T  3025595 ctcaaaaaacgcaaagaaatgacagttttag 3025625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 18451345 - 18451216
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||| || ||||||||||||||||||| | ||||| || ||||| |      
T  18451345 ggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttgcatttttcttcctaccccccatttt-att 18451247  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  18451246 ctccaaaaacgcagagaaatgacagttttag 18451216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 26538132 - 26538257
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  ||||    
T  26538132 tactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctcc 26538230  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    |||||| |||||||||  |||||||||    
T  26538231 aaaaacacagagaaataacagttttag 26538257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 14432173 - 14432302
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| ||||| |||| ||||||||||||| | |||||||||||||||||| || |||||||||||||||||| || ||||| || ||||| |      
T  14432173 ggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgcatttttggtcctaccccccatttt-att 14432271  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  14432272 ctccaaaaacgcagagaaatgacagttttag 14432302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 28847206 - 28847122
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacct 174  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  28847206 ctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 20444780 - 20444875
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||| || |||||    
T  20444780 ggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttgcagttttcgtcctaccccccatttt 20444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 7446376 - 7446497
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||  |||| || ||||| |  |||    
T  7446376 ctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttattgcatttttcgtcatacc-cccatttt-attctc 7446473  T
Q  190 caaaaacgcagagaaatggcagtt 213  Q
    |||||||||||||||||| |||||    
T  7446474 caaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 20440545 - 20440465
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||    
T  20440545 ggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttgcagttttcgt 20440465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 35781177 - 35781097
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  35781177 ggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgcatttttcgt 35781097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 8972274 - 8972363
Alignment:
Q  93 ctcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||  |||| |||||||| ||||||||||||||  ||| |||||||| ||||||||||||||||||||||||||| ||||||||    
T  8972274 ctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttgcatttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 35779743 - 35779834
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    |||||||||||  ||||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||||| || ||||| || |||||    
T  35779743 tactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcattttttgtcctaccccccatttt 35779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 15552567 - 15552482
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacc 173  Q
    |||||||||||||||  | ||| ||||||||||||||||||||||  ||| |||||||| ||||||||||| ||||||||| |||||    
T  15552567 ggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttgtatttttcgtcctacc 15552482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 15551534 - 15551610
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    |||||||||||  |||| |||| |||||||||| |||||||  |||||||| ||| |||||||||||||||||||||    
T  15551534 tactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgcatttttcgt 15551610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 28143477 - 28143416
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||| |||| || |||| |||||||||||| ||||| ||||||||||||||| |||||||||    
T  28143477 ttgcagttttagtcctacgtcctattttcaa-ctccagaaacgcagagaaatgacagttttag 28143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 14942297 - 14942230
Alignment:
Q  149 tttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||| ||||| |||| || |||| |||||||||| ||||||| ||| |||||||||| ||||||||||    
T  14942297 ttttttttgcagttttagtcctacatcctattttc-aactccagaaatgcagagaaatcgcagttttag 14942230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 31797225 - 31797166
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagtttt 215  Q
    ||||| |||| || ||||||||||||||||| ||| | ||||||||||||||| |||||||    
T  31797225 ttgcagttttagtcctacctcctattttcaa-ctctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 5539847 - 5540002
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  5539847 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgtatttttcgtcctacctcctattttcaaa 5539946  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5539947 ctccataaacgcatagaaatggcagttttaggcggttttagacctacccctatgct 5540002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 21856076 - 21856228
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||    
T  21856076 ctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcatcctagctcctattttcaaactc 21856175  T
Q  190 caaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21856176 cagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 21856228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 17433729 - 17433574
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  17433729 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 17433630  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || || ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  17433629 cttcagaaacgcagagaaatgacagttttagacggttttagacctacccctatgct 17433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 18984633 - 18984478
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  18984633 ggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 18984534  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  18984533 ctctagaaacacagagaaatggcagttttaggcggttttagaccttcccctatgct 18984478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 33143948 - 33144103
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||    
T  33143948 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatttcgtcctacctcctattttcaaa 33144047  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33144048 ctctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 33144103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 50970309 - 50970464
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  50970309 ggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccttctattttcaaa 50970408  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  50970409 ctccagaaacgcagagaaatgacagtttttggcggttttagacctacccctatgct 50970464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 87 - 243
Target Start/End: Original strand, 15646223 - 15646379
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  15646223 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttgcatttttcgtcctacctcatattttcaaa 15646322  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgcta 243  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  15646323 ctccataaatgcagagaaatgacagttttaggcggttttagacctacccctatgcta 15646379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 8678572 - 8678727
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  8678572 ggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctgctattttcaaa 8678671  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || || ||||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  8678672 cttcagaaacgcaaagaaatgacagttttaggcggttttagacatacccctatgct 8678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 15173607 - 15173453
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  15173607 ggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 15173509  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15173508 ctctataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 29870133 - 29869978
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  29870133 ggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 29870034  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||  | ||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  29870033 ctttagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 39154534 - 39154379
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  39154534 ggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 39154435  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || || ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  39154434 cttcagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 39154379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 4636485 - 4636330
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  4636485 ggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgcatttttcgtcccacctcctattttcaaa 4636386  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    ||||| ||||||||||||||| || ||||| ||| |||||||||||||||||||||    
T  4636385 ctccagaaacgcagagaaatgacaattttatgcgattttagacctacccctatgct 4636330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 29307454 - 29307326
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  29307454 cctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaact 29307355  T
Q  189 ccaaaaacgcagagaaatggcagttttag 217  Q
    ||| ||||||||||||||| |||||||||    
T  29307354 ccagaaacgcagagaaatgacagttttag 29307326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 94 - 240
Target Start/End: Original strand, 5962616 - 5962762
Alignment:
Q  94 tcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaa 193  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |    
T  5962616 tcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttgcatttttcgttctacctcctattttcaaactccaga 5962715  T
Q  194 aacgcagagaaatggcagttttaggcggttttagacctacccctatg 240  Q
    ||| ||||| |||| |||||||||||||||||| || ||||||||||    
T  5962716 aacacagagtaatgacagttttaggcggttttaaacttacccctatg 5962762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 26859090 - 26859232
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  26859090 ggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcatattttcaaa 26859189  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagac 229  Q
    ||||| |||||||||||| |   ||||||||||||||||||||    
T  26859190 ctccagaaacgcagagaagtaatagttttaggcggttttagac 26859232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 17112335 - 17112467
Alignment:
Q  110 gcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggc 209  Q
    |||||||||||| |||| ||||  |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||      
T  17112335 gcccttttaaaatagaataaaatagtccttcaattatcatttttattgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgat 17112434  T
Q  210 agttttaggcggttttagacctacccctatgct 242  Q
    |||||||||||||||||||||||||||||||||    
T  17112435 agttttaggcggttttagacctacccctatgct 17112467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 50970792 - 50970663
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  50970792 ggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 50970694  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  50970693 ctccaaaaacgcagagaaatgacagttttag 50970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 9019475 - 9019347
Alignment:
Q  89 cctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaact 188  Q
    ||||||||| |||| ||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||     
T  9019475 cctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacctcctattttcaaacc 9019376  T
Q  189 ccaaaaacgcagagaaatggcagttttag 217  Q
    ||| ||||||||||||||  |||||||||    
T  9019375 ccagaaacgcagagaaataacagttttag 9019347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 18984153 - 18984279
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  |||    
T  18984153 ctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctc 18984251  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||  ||||||||    
T  18984252 caaaaacgcagagaaatgatagttttag 18984279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 5540332 - 5540203
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  5540332 ggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 5540234  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  5540233 ctccaaaaacgcagagaaatgacagttttag 5540203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 15646709 - 15646580
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  15646709 ggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacccccaatttt-att 15646611  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  15646610 ctccaaaaacgcagagaaatgacagttttag 15646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 29306984 - 29307113
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  29306984 ggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 29307082  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  29307083 ctccaaaaacgcagagaaatgacagttttag 29307113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 33144433 - 33144304
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || ||||||| || ||||||||||||||||||||| ||||| || ||||| |      
T  33144433 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgcatttttcgtcctaccccccatttt-att 33144335  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  33144334 ctccaaaaacgcagagaaatgacagttttag 33144304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 8679055 - 8678927
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| ||||| |      
T  8679055 ggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttgcatttttcgtcctacctcc-atttt-att 8678958  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||| ||||||||||| |||||||||    
T  8678957 ctccaaaaatgcagagaaatgacagttttag 8678927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 15173127 - 15173256
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||||||||  |||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  15173127 ggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 15173225  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  15173226 ctccaaaaacgcagagaaatgacagttttag 15173256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 29869655 - 29869780
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||  || ||||| |  ||||    
T  29869655 tactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgcatttttcgtcctacaccccatttt-attctcc 29869753  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||| |||||||||    
T  29869754 aaaaacgcagagaaatgacagttttag 29869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 5963092 - 5962963
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| | || ||||||||||||| |||||||||| ||| |||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  5963092 ggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 5962994  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  5962993 ctccaaaaacgcagagaaatgacagttttag 5962963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 9019004 - 9019122
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||| || ||||| |      
T  9019004 ggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttgcatttttcgtcctaccccccatttt-att 9019102  T
Q  187 ctccaaaaacgcagagaaat 206  Q
    ||||||||||||||||||||    
T  9019103 ctccaaaaacgcagagaaat 9019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 17433247 - 17433376
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| ||||| |  | |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | ||||| || ||||| |      
T  17433247 ggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcatcctaccccccatttt-att 17433345  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  17433346 ctccaaaaacgcagagaaatgacagttttag 17433376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 21856557 - 21856428
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||| ||||  || ||||| |      
T  21856557 ggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgcatttttcgtcctactccccatttt-att 21856459  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  21856458 ctccaaaaacgcagagaaatgacagttttag 21856428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 39154054 - 39154179
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| | || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| || ||| | |  ||||    
T  39154054 tactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgcatttttcgtcctaccccccattct-attctcc 39154152  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    ||||||||| ||||||| |||||||||    
T  39154153 aaaaacgcatagaaatgacagttttag 39154179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 26859570 - 26859456
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    |||||||||||||   |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| || ||||  |  |||    
T  26859570 ctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttgcatttttcgtcctaccccccattt--attctc 26859473  T
Q  190 caaaaacgcagagaaat 206  Q
    |||||||||||||||||    
T  26859472 caaaaacgcagagaaat 26859456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 52268321 - 52268416
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||||| ||||||| ||||| || |||||    
T  52268321 ggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttgttgcacttttcgtcctaccccccatttt 52268416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 4636033 - 4636132
Alignment:
Q  116 ttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagtttt 215  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||| || ||||| |  || |||||||||||||||||| |||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt-attcttcaaaaacgcagagaaatgacagtttt 4636130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 47827102 - 47827033
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgtt 156  Q
    |||||||||||||||  |||| |||||||||||||||||||||||  |||||| ||||| ||||||||||    
T  47827102 ggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 52269258 - 52269177
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctac 172  Q
    |||||| |||| |||| ||||||||||||||||||||||||  ||| |||| ||| ||||||||||||| ||||||| ||||    
T  52269258 tactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttgcacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 2733471 - 2733416
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaa 142  Q
    |||||| || |||||  |||||||||||||||||||||||||||||||||||||||    
T  2733471 ggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 17088587 - 17088526
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||| |||| ||||||||||||||||||||| || | ||||||||||||||| |||||||||    
T  17088587 ttgcagttttagttctacctcctattttcaaa-tctagaaacgcagagaaatgacagttttag 17088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 45048583 - 45048504
Alignment:
Q  155 ttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggcggttttagacctacccc 236  Q
    ||||| |||| || ||||||||||||||| ||||||| |||||||||||||| || | |||| || ||||||||||||||||    
T  45048583 ttgcagttttagtcctacctcctattttc-aactccagaaacgcagagaaatagccg-tttatgcagttttagacctacccc 45048504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 17088243 - 17088310
Alignment:
Q  149 tttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||| ||||| |||| || ||||||||||||||| |||| || ||| |||||||||||||||||||||    
T  17088243 ttttttttgcaattttagtcctacctcctattttc-aacttcagaaatgcagagaaatggcagttttag 17088310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 217
Target Start/End: Complemental strand, 44802680 - 44802557
Alignment:
Q  93 ctcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaa 192  Q
    |||||||||  |||| ||||  ||| |||| ||||||||  |||| | || || ||| ||| ||||| |||| |||||||||||||||||| |||||||     
T  44802680 ctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgttttttgcagttttagttctacctcctattttc-aactccag 44802582  T
Q  193 aaacgcagagaaatggcagttttag 217  Q
    |||| |||| ||||| || ||||||    
T  44802581 aaacacagaaaaatgacaattttag 44802557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 95 - 242
Target Start/End: Original strand, 4242 - 4389
Alignment:
Q  95 cacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaa 194  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  195 acgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttaggcggttttagacctacccctatgct 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 4717 - 4592
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| || ||||| |  ||||    
T  4717 tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgcatttttcgtcctaccccccatttt-attctcc 4619  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    |||||| |||||||||| |||||||||    
T  4618 aaaaacacagagaaatgacagttttag 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 2181 - 2028
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  2181 ggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 2082  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatg 240  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  2081 ctccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatg 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 1698 - 1827
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  1698 ggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 1796  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  1797 ctccaaaaacgcagagaaatgacagttttag 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 11137 - 10989
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  11137 ggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaa 11038  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctaccc 235  Q
    ||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  11037 ctcgagaaacgcagagaaattgcagttttaggcggttttagacctaccc 10989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 10652 - 10781
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||| |||||  | ||||| |      
T  10652 ggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctccatttt-att 10750  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||| ||||||||||| |||||||||    
T  10751 ctccaaaaatgcagagaaatgacagttttag 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 17006 - 16855
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| | ||| ||| ||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  17006 tactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactcc 16907  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  16906 agaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 16564 - 16656
Alignment:
Q  124 gaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||| || |||||||||||||||||||||  |||| || ||||| |  ||||||||||||||||||||| |||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 64815 - 64664
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| || |||||||||||||||    
T  64815 tactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgcatttttcgtcctatcttctattttcaaactcc 64716  T
Q  191 aaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    | ||||| ||| ||||  |||||||||||||||||||||||||| |||||||    
T  64715 agaaacggagaaaaataacagttttaggcggttttagacctacctctatgct 64664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 64337 - 64462
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| || ||||| |  ||||    
T  64337 tactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcataccccccatttt-attctcc 64435  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||| |||||||||    
T  64436 aaaaacgcagagaaatgacagttttag 64462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 217
Target Start/End: Complemental strand, 205877 - 205754
Alignment:
Q  92 actcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcca 191  Q
    ||||||||||  |||||||||  ||| |||  ||||||||| |||| | || || ||| ||| ||||| |||| || |||| |||||||||||| |||||    
T  205877 actcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttgcagttttagtcctacgtcctattttcaa-ctcca 205780  T
Q  192 aaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||||||||    
T  205779 aaaacgcagagaaatggcagttttag 205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 1251 - 1125
Alignment:
Q  91 tactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactcc 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||| ||    
T  1251 tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatctttcgtcctacctcctattttcaaacccc 1152  T
Q  191 aaaaacgcagagaaatggcagttttag 217  Q
    | ||||||||| |||||||||||||||    
T  1151 agaaacgcagaaaaatggcagttttag 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 784 - 912
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| || ||||| |      
T  784 ggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttgcatttttcgtcctaccccccatttt-att 881  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||  |||||||||    
T  882 ctccaaaaacgcagagaaataacagttttag 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 5305 - 5160
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||| ||||||||| |||| || ||||||||||||||| ||||||||  |||||||| |||||||||||||||||||||    |||||||||||||||    
T  5305 ggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttgcatttttcgt----cctcctattttcaaa 5210  T
Q  187 ctccaaaaacgcagagaaatggcagttttaggcggttttagacctacccc 236  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||| ||||||    
T  5209 ctccagaaacgcagaaaaatgacagttttaggcggttttagacttacccc 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 4824 - 4953
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |      
T  4824 ggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccatttt-att 4922  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||  |||||||||    
T  4923 ctccaaaaacgcagagaaataacagttttag 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 42207 - 42330
Alignment:
Q  94 tcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaa 193  Q
    ||||||||| | ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||  ||||||||||||||||||| || |    
T  42207 tcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgcattttttgtcatacctcctattttcaaacttcaga 42306  T
Q  194 aacgcagagaaatggcagttttag 217  Q
    |||||||||||||| |||||||||    
T  42307 aacgcagagaaatgacagttttag 42330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 42669 - 42544
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||| ||||| | | |||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||| ||||| || ||||| |  |||    
T  42669 ctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgtttcatttttcgtcctacc-cccatttt-attctc 42572  T
Q  190 caaaaacgcagagaaatggcagttttag 217  Q
    |||||||||||||||||| |||||||||    
T  42571 caaaaacgcagagaaatgacagttttag 42544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 134187 - 134058
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    ||||||||||||||||  ||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||| |      
T  134187 ggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttgttgcatttttcgtcctaccccccatttt-att 134089  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||| |||||||||    
T  134088 ctccaaaaacgcagagaaatgacagttttag 134058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 9964 - 10116
Alignment:
Q  88 gcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaac 187  Q
    ||||| ||||||||| | || ||||||||||| | ||||||||| ||||||||||||| || ||||||| || ||||| | |||||||||||||||||||    
T  9964 gcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttaca-ttttcatcctacctcctattttcaaac 10062  T
Q  188 tccaaaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 242  Q
    || | ||||| ||||||||| || ||||||||||||||| || ||||||||||||    
T  10063 tcaagaaacg-agagaaatgacaattttaggcggttttaaacatacccctatgct 10116  T

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Target: scaffold0432; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 10383 - 10259
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactc 189  Q
    ||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||| |  |||    
T  10383 ctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc-cccatttt-attctc 10286  T
Q  190 caaaaacgcagagaaatggcagtttta 216  Q
    ||||||  |||||||||| ||||||||    
T  10285 caaaaattcagagaaatgacagtttta 10259  T

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Target: scaffold0176 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 18866 - 18994
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaa 186  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| | ||||| || ||||| |      
T  18866 ggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttgttgcatttttcatcctacc-cccatttt-att 18963  T
Q  187 ctccaaaaacgcagagaaatggcagttttag 217  Q
    ||||||||||||||||||||  |||||||||    
T  18964 ctccaaaaacgcagagaaataacagttttag 18994  T

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Target: scaffold0176; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 19135 - 19069
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacattttt 153  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19135 ggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

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Target: scaffold0113 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 28757 - 28677
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    |||||||| ||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  28757 ggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcagttttcgt 28677  T

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Target: scaffold1585 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 598 - 678
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgt 167  Q
    |||||||||||||||  | || |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  598 ggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttgtatttttcgt 678  T

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Target: scaffold0168 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 7784 - 7691
Alignment:
Q  105 gtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctattttcaaactccaaaaacgca 199  Q
    ||||| |||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||||| ||||| |||||||| |  |||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt-atcctccaaaaacgca 7691  T

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Target: scaffold0076 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 8520 - 8451
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgca 159  Q
    ||||| ||||||| |||||| ||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  8520 ctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgca 8451  T

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Target: scaffold1696 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 480 - 565
Alignment:
Q  87 ggcctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctac 172  Q
    |||||||||||||||  |||| ||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||||||||| ||||    
T  480 ggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgcatttttcgtcctac 565  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 61969 - 61877
Alignment:
Q  90 ctactcacgaaaccggtcctgcccttttaaaacagaacaaaacggtccttcaattaacatttttgttgcatttttcgttctacctcctatttt 182  Q
    ||||||||||||  |||||| ||||||||||| |||||||||   || ||||| || ||||||||||  ||||||||| ||||| || |||||    
T  61969 ctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttatatttttcgtcctaccccccatttt 61877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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