View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10353_high_5 (Length: 340)
Name: NF10353_high_5
Description: NF10353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10353_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 10023559 - 10023883
Alignment:
| Q |
1 |
ttattatgatattgttttatcgattttcgatcaatcttttgtatattccgtaaccttttgtttatgatcaaaataatataataaaagaaaaatcactggc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10023559 |
ttattatgatattgttttatcgattttcgatcaatcttttgtatattccgtaaccttttgtttatgatcaaaataatataataaaagaaaaatcactggc |
10023658 |
T |
|
| Q |
101 |
tcatgcatctaatgaagttaatgagtagtaaactaattatcctgcttgatttcacg-ctgcagctataaagcagagaatggagaaggatgttgatgaagt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10023659 |
tcatgcatctaatgaagttaatgagtagtaaactaattatcctgcttgatttcacgtctgcagctataaagcagagaatggagaaggatgttgatgaagt |
10023758 |
T |
|
| Q |
200 |
taagaaaactgcatatttcttaaagaccaaagttgaagagctggacaaagaggtatgatctctactgaaagtatttcggtgttttattaagtacttagat |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
10023759 |
taagaaaactgcatatttcttaaagaccaaagttgaagagctggacaaagaggtatgatctctactgaaagtatttcggtgttttattaagtacctagat |
10023858 |
T |
|
| Q |
300 |
tcttgttattaactcatcacattat |
324 |
Q |
| |
|
||||||||||||||||||||||||| |
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| T |
10023859 |
tcttgttattaactcatcacattat |
10023883 |
T |
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