View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10353_high_9 (Length: 266)
Name: NF10353_high_9
Description: NF10353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10353_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 32856145 - 32856328
Alignment:
| Q |
17 |
agaaacagatacactttttaatctatttctaatctaacattttccccaaattagaaaccacggatgagagagggttggatagctcttgctttgagttaag |
116 |
Q |
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| T |
32856145 |
agaaacagatacactttttaatctatttctaatctaacattttccccaaattagaaaccacggatgagagagggttggatagctcttgctttgagttaag |
32856244 |
T |
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| Q |
117 |
agagaaagagttgggggttctgggttcgaacgtggacaaagaaatagatctaaatttaacaactaattactaacctttgtcatt |
200 |
Q |
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| T |
32856245 |
agagaaagagttgggggttctgggttcgaacgtggacagagaaatagatctaaatttaacaactaattactaacctttgtcatt |
32856328 |
T |
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Target: chr2 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 10223426 - 10223394
Alignment:
| Q |
169 |
aatttaacaactaattactaacctttgtcatta |
201 |
Q |
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|||||||||||||||||||||| |||||||||| |
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| T |
10223426 |
aatttaacaactaattactaacatttgtcatta |
10223394 |
T |
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