View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10353_low_9 (Length: 374)
Name: NF10353_low_9
Description: NF10353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10353_low_9 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 14178708 - 14179057
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14178708 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
14178807 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178808 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
14178903 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
14178904 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttattgctaccgctgcgctgcaagatccagtctct |
14179003 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14179004 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
14179057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 14173954 - 14174304
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14173954 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
14174053 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174054 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
14174149 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
14174150 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcactaccgctgcgctgcaagatccagtctct |
14174249 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174250 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
14174304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 28611916 - 28611566
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28611916 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
28611817 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611816 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
28611721 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
28611720 |
ttgtcccgtggtttttccctcggtattagagggtttttcacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtctct |
28611621 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611620 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
28611566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 351
Target Start/End: Complemental strand, 28607154 - 28606805
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28607154 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
28607055 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607054 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
28606959 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||| ||||| |
|
|
| T |
28606958 |
ttgtcccgtggtttttccctcggtattagagggtttttcacgttaaatattggtgttaattttttttatcgctaccgctgcgctgcaagatccagtctct |
28606859 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606858 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
28606805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 44161603 - 44161949
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
44161603 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
44161702 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161703 |
gtcttacgggaaacactatattgtatctct----tgtgtgtgtaagagagtggagaga--attgtaatattctttaatatagtggaatatttttcggagt |
44161796 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
44161797 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccaatctct |
44161896 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161897 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
44161949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 11104486 - 11104829
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| | |
|
|
| T |
11104486 |
gtgttgagtaaatccagagagtgtaggaaaaatacaccgggtggatatcatctctataacttctaggtgttataaaataatagcatttgaataggagtgg |
11104585 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
11104586 |
gtctcacgggaaacactatattgtatctct-----ttgtgtgtaagagagtggagagaatattgtaatattcttagatatggtggaatatttttcggagt |
11104680 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctctttt |
300 |
Q |
| |
|
||||||||||| ||| ||||| ||||||||| ||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
11104681 |
ttgtcccgtgg-tttaccctcgatattagaggattttctatgttaaatattggtgttcatttttatcgctacagctgcgctgcaagatccaatctctttt |
11104779 |
T |
|
| Q |
301 |
ggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11104780 |
ggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
11104829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 46 - 351
Target Start/End: Complemental strand, 48827000 - 48826701
Alignment:
| Q |
46 |
tatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnna |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||| | |
|
|
| T |
48827000 |
tatcatctctataacttctaggtgctataaaataatagcattcaaataggagtgaatctcacgggaaacactatattgtatctcttgtgtgtgta----a |
48826905 |
T |
|
| Q |
146 |
gagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtta |
245 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||| |
|
|
| T |
48826904 |
gagagcgaagagaatattgtaatattctttaatatagtggaatatttttcggag-ttgtcccgtgatttttccctcggtattagaggattttccacgtta |
48826806 |
T |
|
| Q |
246 |
aatattggtgttc-annnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagc |
344 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||| | |
|
|
| T |
48826805 |
aatattggtgttctttttctatcgctaccgctgcgctgcaagatccaatctc--ttgaattttgaaattttaatttacaattgcgttaagctcgtcgatc |
48826708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 153 - 323
Target Start/End: Complemental strand, 48708256 - 48708086
Alignment:
| Q |
153 |
gagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattg |
252 |
Q |
| |
|
||||||||||||||||||| ||||||||| || ||||||||| |||||||||| ||||||||||| || ||||||| || ||||| || ||||||||||| |
|
|
| T |
48708256 |
gagagaatattgtaatattttttaatataatgaaatattttttggagtttgtcacgtggtttttctcttagtattatagagtttttcatgttaaatattg |
48708157 |
T |
|
| Q |
253 |
gtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttaca |
323 |
Q |
| |
|
|| || | || ||| ||||| || ||||| |||| |||||| ||||||||||||||||||||| |
|
|
| T |
48708156 |
gtatttaattttatcgccaccactgcgttgtaagattcaatttcttttatattttggaattttaatttaca |
48708086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 24726381 - 24726288
Alignment:
| Q |
145 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttc |
238 |
Q |
| |
|
||||| ||||||||||||| | || |||||||||||| ||||||||||||| ||||||||| ||||| |||||||| ||||||| ||||||| |
|
|
| T |
24726381 |
agagaatggagagaatattattatgttctttaatataatggaatatttttcagagtttgtctcgtggcttttcccttgatattagatggttttc |
24726288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 12930693 - 12931042
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
12930693 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtag |
12930792 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930793 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
12930888 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctctt |
298 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
12930889 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctctt |
12930988 |
T |
|
| Q |
299 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
352 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930989 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
12931042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 12935439 - 12935786
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
12935439 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagagtaaaagtag |
12935538 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935539 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
12935634 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctctt |
298 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |
|
|
| T |
12935635 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtttctt |
12935734 |
T |
|
| Q |
299 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
350 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935735 |
ttgaattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
12935786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 26505055 - 26504985
Alignment:
| Q |
145 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttt |
215 |
Q |
| |
|
||||||| || |||||||||||||||| |||| |||||| |||||||||| ||||||||| | |||||||| |
|
|
| T |
26505055 |
agagagttgaaagaatattgtaatattttttattatagttgaatattttttggagtttgtactgtggtttt |
26504985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 15588948 - 15589060
Alignment:
| Q |
147 |
agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaa |
246 |
Q |
| |
|
|||||||||| ||| |||||||||| ||| ||| |||| ||||||||| ||||||||| | || |||||| |||| || ||||||||||| || ||| |
|
|
| T |
15588948 |
agagtggagaaaatgttgtaatattgtttgataaagtgaaatattttttagagtttgtcacttgatttttctctcattaatagagggtttttcaaaataa |
15589047 |
T |
|
| Q |
247 |
atattggtgttca |
259 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
15589048 |
atattgatgttca |
15589060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 26504895 - 26504850
Alignment:
| Q |
297 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcga |
342 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | |||| |||||||| |
|
|
| T |
26504895 |
ttttggattttgaaattttaatttacacttccattaaactcgtcga |
26504850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 34907156 - 34907503
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
34907156 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtag |
34907255 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907256 |
gtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
34907351 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctctt |
298 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
34907352 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctctt |
34907451 |
T |
|
| Q |
299 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907452 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
34907503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 37040774 - 37040426
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37040774 |
gtgttgagtaaatccagagagtgtgggaaaaatacatcgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtag |
37040675 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040674 |
gtctcacggaaaacactatattgtatctct----tgtgtgtgtgagagagtggagaaaatattgtaatattctttaatatagtggaatatttttcggagt |
37040579 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctct |
297 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | |
|
|
| T |
37040578 |
ttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtcttt |
37040479 |
T |
|
| Q |
298 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040478 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
37040426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 15290249 - 15290596
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| ||| | |
|
|
| T |
15290249 |
gtgttgactaaatccagaaagtgtgg-aaaaatacaccgggtgggtatcatctctataacttctaggtgctgaaata--atagcattcgaataggagtgg |
15290345 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||| ||||| |
|
|
| T |
15290346 |
gtctcacgg-aaacactatattgtatctcttgtgtgtgta----agagagtggagagaatattgtaatattcttaaatatagtggaaaatcttttggagt |
15290440 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc- |
296 |
Q |
| |
|
|||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
15290441 |
ttgtcccgtggtttatacctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaaggctgcgctgcaagatccaatctct |
15290540 |
T |
|
| Q |
297 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
352 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
15290541 |
ttttggattttgaaattttaatttacaattgcgttaagctcgtcgagcccaacaag |
15290596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 45 - 350
Target Start/End: Original strand, 12099060 - 12099361
Alignment:
| Q |
45 |
gtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnn |
144 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| |||||| |||| |||||| ||| ||||||| ||||||| ||||||| ||||| |
|
|
| T |
12099060 |
gtatcatctctataacttttaggtgttataaaataatatcatttgaataggagtgagtctcactagaaacacaatattgtgtctcttgtgcgtgta---- |
12099155 |
T |
|
| Q |
145 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtt |
244 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| || ||||||||||||| ||||| |
|
|
| T |
12099156 |
agagagtggagagaatattgtaatattctttaatatagttgaaattttttcggagtttgtcccttggtttttccttcgtcattagagggtttttcacgta |
12099255 |
T |
|
| Q |
245 |
aaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagc |
344 |
Q |
| |
|
|||||||| | |||| |||| || || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
12099256 |
aaatattgcttttcatttttatcgctatcggtgagctgcaagatcatatctcttttggattttggaattttaatttacactcgcgttaaactcgtcgagc |
12099355 |
T |
|
| Q |
345 |
ccaaca |
350 |
Q |
| |
|
|||||| |
|
|
| T |
12099356 |
ccaaca |
12099361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 12082055 - 12082227
Alignment:
| Q |
25 |
gggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgt |
124 |
Q |
| |
|
|||||||||| | ||||| ||||| |||||||||||||||||| ||||||| |||||| |||| |||||| || |||||| ||||||||||||||| |
|
|
| T |
12082055 |
gggaaaaatatatcgggtaggtattatctctataacttctaggcgctataaaataataacatttgaataggagcgagtctcattagaaacactatattgt |
12082154 |
T |
|
| Q |
125 |
atctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagttt |
202 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12082155 |
atctct----tttccgtgtaagagagtggagaaaatattgtaatattc-ttaatatagtggaatattttttggagttt |
12082227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 268 - 350
Target Start/End: Original strand, 12084669 - 12084751
Alignment:
| Q |
268 |
gctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
350 |
Q |
| |
|
||||||| |||||| ||||||||||| ||| |||||||||| ||||||||||||| || | ||||||||||| |||||||||| |
|
|
| T |
12084669 |
gctaccgttgcgctacaagatccaatgtctattggattttgaaattttaatttaccctcgtgttaagctcgttgagcccaaca |
12084751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 2757418 - 2757307
Alignment:
| Q |
145 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtt |
244 |
Q |
| |
|
||||||||||||||||| || |||||| || |||||||||||||| ||||| | |||||| | |||||||||| | || |||| |||| ||| || || |
|
|
| T |
2757418 |
agagagtggagagaatagtgcaatatttttaaatatagtggaata-ttttcaaaatttgtctcatggtttttccttaagcattaaaggggttttcatatt |
2757320 |
T |
|
| Q |
245 |
aaatattggtgtt |
257 |
Q |
| |
|
||||||||||||| |
|
|
| T |
2757319 |
aaatattggtgtt |
2757307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 2757273 - 2757211
Alignment:
| Q |
290 |
caatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
352 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||| ||||||||| || | ||||||| |
|
|
| T |
2757273 |
caatttcttttgaattttggaattttaatttacacttgtaataagctcgttgaacacaacaag |
2757211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 29107223 - 29106878
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtggg-tatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
29107223 |
gtgttgagtaaatccagagagtgtgggaaaaatacattgggtggggtatcatctttataacttctaggtgctaaaaaataatagcattagaatagaagta |
29107124 |
T |
|
| Q |
100 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
199 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107123 |
ggtctcacgggaaacactat-ttgtatctcttgtgtgtgta----agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
29107029 |
T |
|
| Q |
200 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttt |
299 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
29107028 |
tttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttaacgctaccgctgcgctgcaagatccaatcttttt |
29106929 |
T |
|
| Q |
300 |
tggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
350 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
29106928 |
tggattttggaattttaatttacacttgcattaagctcctcgatcccaaca |
29106878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 351
Target Start/End: Complemental strand, 42911337 - 42910992
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
42911337 |
gtgttgagtaaatccagagagtgtggaaaaaatacactgggtgggtatcatctctataacttcttggtgctataaaataatagcattagaatagaagtag |
42911238 |
T |
|
| Q |
101 |
gtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagt |
200 |
Q |
| |
|
|||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
42911237 |
gtctcaagggaaacactatattgtatcttt----tgtgtgtgtgagagagtggagagaatattgtaatattcttaaatatagtggaata-ttttcggagt |
42911143 |
T |
|
| Q |
201 |
ttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctctttt |
300 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||| |||||||||| |
|
|
| T |
42911142 |
ttgtcccgtggtttttccctcggtattagagggttttccatgttaaatattggtgttcatttttatcgttgccgctgcgctgcaagatctaatctctttt |
42911043 |
T |
|
| Q |
301 |
ggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
351 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
42911042 |
ggattttaaaattttaatttccacttgcgttaagctcgtcgagcccaacaa |
42910992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 270 - 352
Target Start/End: Complemental strand, 38994779 - 38994697
Alignment:
| Q |
270 |
taccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
352 |
Q |
| |
|
||||||||| |||||||||||||| | ||||| |||||||||||||||||||||| || ||||| ||||| ||||||||||| |
|
|
| T |
38994779 |
taccgctgcactgcaagatccaattttgtttgggttttggaattttaatttacactagcattaagatcgtcaagcccaacaag |
38994697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 38997320 - 38997230
Alignment:
| Q |
168 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttc |
258 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| ||||||| || ||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
38997320 |
tattctttaatataatggattattttttggagtttgtcccgtagtttttcgttcgatattagagggttttcgacgtaaaatattgctgttc |
38997230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 38997193 - 38997136
Alignment:
| Q |
295 |
tcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
352 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||| | |||| ||||||||| |
|
|
| T |
38997193 |
tcttttggattctggaattttaatttacacccgcattaagcccttcgaacccaacaag |
38997136 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 8539200 - 8539554
Alignment:
| Q |
1 |
gtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtag |
100 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||| ||||||||| | |||||| ||| | |
|
|
| T |
8539200 |
gtgttcagtaaattcagagagtgtgggaaaaatacatcggatgggtatcatctctataacttttaggtgctgtaaaataatagcaatcgaataggagtgg |
8539299 |
T |
|
| Q |
101 |
gtctcacgggaaacactata---ttgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcgg |
197 |
Q |
| |
|
||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
8539300 |
gtctcacgg-aaacactataatattgtatctcttgtgtgtgta----agagagtggagataatattgtaatattcttaaatatagtggaatatctttcgg |
8539394 |
T |
|
| Q |
198 |
agtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca-nnnnnnnngctaccgctgcgctgcaagatccaatctc |
296 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||| |
|
|
| T |
8539395 |
agtttgtcccgtgatttttccctcggtattagagggttttccacgttaaatattgatgttcattttttattgttaccgctgcgctgcaagatccaatctc |
8539494 |
T |
|
| Q |
297 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagatat |
356 |
Q |
| |
|
|||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8539495 |
ttttagaatttggaattttaatttacacttgcgttaagctcgtcgagcccaacaatatat |
8539554 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 51302181 - 51302306
Alignment:
| Q |
4 |
ttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtc |
103 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||| |||||| ||| |||| |
|
|
| T |
51302181 |
ttgagtaaatccagagagtgtggataaaatacaccgggtgggaatcatctctataacttctaggtgctataaaacaattgcattcgaataggagtgggtc |
51302280 |
T |
|
| Q |
104 |
tcacgggaaacactatattgtatctc |
129 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
51302281 |
tcacgggaaacactatattgtatctc |
51302306 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 268 - 352
Target Start/End: Original strand, 51302937 - 51303021
Alignment:
| Q |
268 |
gctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaag |
352 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
51302937 |
gctaccgctgcgctgcaagatccaatctgttttggattttgaaattttaatttacacttgcattaagctcgtcgatcccaacaag |
51303021 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 51302308 - 51302344
Alignment:
| Q |
223 |
gtattagagggttttccacgttaaatattggtgttca |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302308 |
gtattagagggttttccacgttaaatattggtgttca |
51302344 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 168 - 350
Target Start/End: Complemental strand, 2100379 - 2100199
Alignment:
| Q |
168 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnn |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||||| |||||||||||| |||||||||| |||||| |
|
|
| T |
2100379 |
tattctttaatatagtggaatatttttcggagtttgcccc---gtttttcgctcattattaaagggttttccaccttaaatattgatgttcaattttatc |
2100283 |
T |
|
| Q |
268 |
gctaccgctgcgctgcaaga-tccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
350 |
Q |
| |
|
|| || || ||||||| | || |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2100282 |
attatcgttgtgctgcaaaattcaaatctcttatgaattttggaattttaatttacacttgtgttaagctcgtcgagcccaaca |
2100199 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 2100753 - 2100723
Alignment:
| Q |
145 |
agagagtggagagaatattgtaatattcttt |
175 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
2100753 |
agagagtggagagaatattgtaatattcttt |
2100723 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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