View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10360_high_1 (Length: 741)

Name: NF10360_high_1
Description: NF10360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10360_high_1
NF10360_high_1
[»] scaffold0137 (1 HSPs)
scaffold0137 (50-449)||(5859-6258)
[»] chr5 (61 HSPs)
chr5 (50-449)||(40379678-40380076)
chr5 (50-449)||(16546216-16546615)
chr5 (50-449)||(40381889-40382287)
chr5 (50-449)||(16543994-16544393)
chr5 (44-449)||(25077706-25078110)
chr5 (44-449)||(25135675-25136079)
chr5 (44-451)||(10592842-10593248)
chr5 (61-449)||(22536482-22536852)
chr5 (44-449)||(29751338-29751724)
chr5 (58-449)||(18441840-18442233)
chr5 (44-449)||(29719965-29720354)
chr5 (58-449)||(9789416-9789809)
chr5 (58-449)||(26177466-26177859)
chr5 (58-437)||(26170370-26170750)
chr5 (149-436)||(24136183-24136470)
chr5 (210-449)||(27450171-27450409)
chr5 (210-449)||(43599079-43599318)
chr5 (210-449)||(43604571-43604810)
chr5 (210-449)||(43610063-43610302)
chr5 (210-449)||(27445328-27445566)
chr5 (44-226)||(29722332-29722514)
chr5 (265-450)||(30631764-30631949)
chr5 (271-449)||(29722152-29722332)
chr5 (191-449)||(1456638-1456896)
chr5 (265-442)||(28807083-28807260)
chr5 (231-451)||(16407639-16407862)
chr5 (265-449)||(15045096-15045279)
chr5 (58-449)||(16409077-16409451)
chr5 (168-320)||(35388016-35388169)
chr5 (210-341)||(43592634-43592764)
chr5 (265-442)||(2785778-2785955)
chr5 (265-442)||(33768587-33768764)
chr5 (265-442)||(33791719-33791896)
chr5 (271-449)||(29402550-29402728)
chr5 (266-437)||(37556137-37556308)
chr5 (266-437)||(37560959-37561130)
chr5 (325-449)||(29752265-29752390)
chr5 (149-349)||(38219732-38219929)
chr5 (168-449)||(9352807-9353089)
chr5 (265-442)||(31396497-31396674)
chr5 (326-451)||(15465001-15465127)
chr5 (265-442)||(31401354-31401531)
chr5 (191-341)||(31180591-31180741)
chr5 (326-437)||(36931856-36931967)
chr5 (58-188)||(25412601-25412730)
chr5 (392-449)||(31180773-31180830)
chr5 (58-188)||(36074244-36074373)
chr5 (392-449)||(43592797-43592854)
chr5 (58-154)||(13488075-13488171)
chr5 (58-188)||(13342900-13343029)
chr5 (58-188)||(28750855-28750985)
chr5 (392-442)||(14520796-14520846)
chr5 (58-154)||(30182461-30182557)
chr5 (401-450)||(35388197-35388247)
chr5 (168-245)||(15464876-15464952)
chr5 (522-557)||(30468668-30468703)
chr5 (406-449)||(43625605-43625648)
chr5 (58-170)||(533626-533737)
chr5 (58-154)||(39468749-39468845)
chr5 (125-196)||(16407877-16407947)
chr5 (58-188)||(30683120-30683249)
[»] chr7 (52 HSPs)
chr7 (50-451)||(18392379-18392782)
chr7 (50-449)||(6592523-6592921)
chr7 (50-449)||(6594741-6595137)
chr7 (50-449)||(1562187-1562587)
chr7 (44-449)||(32060503-32060888)
chr7 (50-350)||(18388943-18389245)
chr7 (44-449)||(24789426-24789831)
chr7 (44-450)||(20343499-20343887)
chr7 (149-449)||(2058304-2058604)
chr7 (44-437)||(43504333-43504708)
chr7 (230-449)||(21640204-21640423)
chr7 (168-437)||(21646360-21646630)
chr7 (58-449)||(39730933-39731345)
chr7 (84-437)||(25767180-25767527)
chr7 (168-449)||(18409116-18409399)
chr7 (230-449)||(20357028-20357247)
chr7 (168-450)||(18413992-18414276)
chr7 (149-406)||(1532947-1533204)
chr7 (265-437)||(21811751-21811923)
chr7 (211-449)||(12406619-12406857)
chr7 (211-449)||(4873483-4873721)
chr7 (231-449)||(48408398-48408619)
chr7 (58-225)||(48408605-48408771)
chr7 (211-449)||(31109070-31109309)
chr7 (265-437)||(24023831-24024003)
chr7 (265-442)||(24265684-24265861)
chr7 (137-437)||(2479647-2479947)
chr7 (211-449)||(12397267-12397492)
chr7 (265-442)||(24260828-24261005)
chr7 (285-437)||(47264102-47264254)
chr7 (393-449)||(18390506-18390562)
chr7 (78-189)||(48491416-48491526)
chr7 (58-189)||(48489268-48489399)
chr7 (265-442)||(16880476-16880653)
chr7 (265-442)||(16885331-16885508)
chr7 (78-188)||(1113495-1113604)
chr7 (374-437)||(44847632-44847695)
chr7 (58-154)||(24514960-24515056)
chr7 (58-154)||(29990927-29991023)
chr7 (58-188)||(35853754-35853883)
chr7 (389-437)||(1532897-1532945)
chr7 (374-442)||(21983791-21983859)
chr7 (58-154)||(4178647-4178743)
chr7 (347-388)||(18390479-18390520)
chr7 (74-154)||(30024949-30025028)
chr7 (58-188)||(47676336-47676465)
chr7 (374-437)||(21989455-21989518)
chr7 (392-442)||(79955-80005)
chr7 (306-340)||(4178461-4178495)
chr7 (58-154)||(43864116-43864212)
chr7 (78-154)||(14070054-14070129)
chr7 (78-154)||(14380082-14380157)
[»] chr3 (69 HSPs)
chr3 (50-449)||(25637013-25637412)
chr3 (44-449)||(3617034-3617439)
chr3 (44-449)||(6716085-6716490)
chr3 (44-449)||(54634710-54635115)
chr3 (50-449)||(4600928-4601328)
chr3 (50-450)||(10055804-10056203)
chr3 (50-449)||(10066915-10067313)
chr3 (50-449)||(4598707-4599107)
chr3 (50-449)||(10210978-10211379)
chr3 (50-449)||(10058027-10058425)
chr3 (50-449)||(10060249-10060647)
chr3 (50-449)||(10062471-10062869)
chr3 (50-449)||(10064693-10065091)
chr3 (44-449)||(6718288-6718674)
chr3 (44-449)||(45282585-45282973)
chr3 (50-449)||(10208778-10209159)
chr3 (58-449)||(23198137-23198530)
chr3 (58-449)||(23200336-23200729)
chr3 (175-450)||(8477729-8478003)
chr3 (149-449)||(40372256-40372556)
chr3 (44-450)||(800684-801081)
chr3 (167-449)||(7167600-7167882)
chr3 (211-449)||(22172662-22172899)
chr3 (149-449)||(28503319-28503620)
chr3 (166-433)||(27352097-27352364)
chr3 (213-449)||(1306366-1306604)
chr3 (92-320)||(7782375-7782603)
chr3 (191-449)||(28501152-28501410)
chr3 (265-437)||(2672431-2672603)
chr3 (231-399)||(2671115-2671283)
chr3 (149-371)||(8738602-8738823)
chr3 (149-371)||(9090840-9091061)
chr3 (265-449)||(18656844-18657029)
chr3 (265-437)||(2676587-2676759)
chr3 (168-449)||(33386137-33386419)
chr3 (78-449)||(37408036-37408406)
chr3 (231-449)||(26928080-26928301)
chr3 (172-449)||(27453303-27453581)
chr3 (168-388)||(32143664-32143885)
chr3 (265-442)||(8512643-8512820)
chr3 (265-444)||(32475887-32476066)
chr3 (265-444)||(32480745-32480924)
chr3 (211-449)||(37726060-37726299)
chr3 (265-451)||(8517523-8517709)
chr3 (326-449)||(7782588-7782712)
chr3 (265-442)||(24968520-24968697)
chr3 (58-154)||(5260523-5260619)
chr3 (58-269)||(45094920-45095133)
chr3 (78-158)||(9636347-9636427)
chr3 (285-388)||(27986000-27986103)
chr3 (392-449)||(8738542-8738599)
chr3 (392-449)||(9090780-9090837)
chr3 (78-170)||(29812920-29813010)
chr3 (392-440)||(40734084-40734132)
chr3 (390-437)||(27974446-27974493)
chr3 (391-442)||(36029658-36029709)
chr3 (58-189)||(5236656-5236787)
chr3 (58-154)||(5258344-5258440)
chr3 (392-442)||(16264896-16264946)
chr3 (392-442)||(21711768-21711818)
chr3 (392-442)||(30709266-30709316)
chr3 (392-437)||(27027273-27027318)
chr3 (306-340)||(3393293-3393327)
chr3 (306-340)||(5258592-5258626)
chr3 (390-436)||(27985971-27986017)
chr3 (137-189)||(27986180-27986231)
chr3 (392-442)||(39032025-39032075)
chr3 (58-154)||(40735255-40735351)
chr3 (401-442)||(1730916-1730957)
[»] chr4 (50 HSPs)
chr4 (44-451)||(7122265-7122672)
chr4 (50-449)||(5137875-5138274)
chr4 (50-449)||(5135649-5136049)
chr4 (50-449)||(8395191-8395589)
chr4 (50-450)||(8392981-8393380)
chr4 (44-451)||(31495495-31495904)
chr4 (58-449)||(13992485-13992879)
chr4 (149-450)||(24742277-24742578)
chr4 (257-449)||(7124489-7124681)
chr4 (265-449)||(18856125-18856309)
chr4 (211-449)||(56141511-56141750)
chr4 (210-449)||(51520812-51521050)
chr4 (44-150)||(7124785-7124891)
chr4 (265-442)||(45347324-45347501)
chr4 (211-449)||(28467977-28468217)
chr4 (232-451)||(9223897-9224115)
chr4 (211-449)||(9228686-9228924)
chr4 (231-388)||(29761040-29761197)
chr4 (334-449)||(18860406-18860521)
chr4 (265-449)||(5733062-5733247)
chr4 (265-449)||(3814422-3814605)
chr4 (168-320)||(31985236-31985389)
chr4 (269-409)||(18712295-18712435)
chr4 (265-386)||(45356861-45356982)
chr4 (326-458)||(31985118-31985251)
chr4 (137-353)||(5268769-5268986)
chr4 (374-442)||(8689044-8689114)
chr4 (58-154)||(30000005-30000101)
chr4 (390-442)||(5143807-5143859)
chr4 (392-442)||(16628353-16628403)
chr4 (392-442)||(38151918-38151968)
chr4 (58-154)||(48142914-48143010)
chr4 (462-590)||(48968424-48968560)
chr4 (58-154)||(52082857-52082953)
chr4 (393-442)||(3778116-3778165)
chr4 (78-154)||(52093885-52093960)
chr4 (374-442)||(5148226-5148294)
chr4 (391-442)||(5268699-5268750)
chr4 (658-693)||(48968321-48968356)
chr4 (306-340)||(5370523-5370557)
chr4 (58-154)||(5429551-5429647)
chr4 (392-442)||(6742896-6742946)
chr4 (58-154)||(9927657-9927753)
chr4 (392-442)||(10047932-10047982)
chr4 (392-442)||(16622774-16622824)
chr4 (58-154)||(37740498-37740594)
chr4 (58-154)||(52095562-52095658)
chr4 (58-154)||(56178836-56178932)
chr4 (78-154)||(12739771-12739846)
chr4 (78-154)||(12747977-12748052)
[»] scaffold0674 (1 HSPs)
scaffold0674 (50-449)||(3909-4310)
[»] chr1 (42 HSPs)
chr1 (50-449)||(44203218-44203617)
chr1 (44-449)||(9036003-9036407)
chr1 (44-451)||(40281956-40282367)
chr1 (36-449)||(20622408-20622821)
chr1 (56-451)||(21053538-21053936)
chr1 (44-450)||(9986784-9987192)
chr1 (265-449)||(44023377-44023561)
chr1 (168-449)||(19365768-19366051)
chr1 (265-449)||(1054514-1054698)
chr1 (265-449)||(39445898-39446082)
chr1 (265-442)||(25439406-25439583)
chr1 (231-449)||(19360912-19361133)
chr1 (265-442)||(25444599-25444776)
chr1 (58-449)||(51764990-51765363)
chr1 (265-437)||(41391002-41391173)
chr1 (191-388)||(24793708-24793904)
chr1 (168-320)||(24202360-24202513)
chr1 (149-371)||(24786904-24787125)
chr1 (326-449)||(24202251-24202375)
chr1 (211-449)||(13604095-13604334)
chr1 (265-388)||(41398657-41398779)
chr1 (265-442)||(43987956-43988133)
chr1 (58-188)||(13316518-13316647)
chr1 (392-449)||(24793666-24793723)
chr1 (58-154)||(20762544-20762640)
chr1 (58-189)||(44454997-44455128)
chr1 (79-188)||(3156705-3156812)
chr1 (392-442)||(13598967-13599017)
chr1 (58-154)||(31659110-31659206)
chr1 (392-450)||(41398764-41398822)
chr1 (168-225)||(19358530-19358587)
chr1 (392-437)||(21536125-21536170)
chr1 (78-154)||(28220447-28220522)
chr1 (78-154)||(28223642-28223717)
chr1 (58-188)||(37503754-37503883)
chr1 (392-436)||(37070334-37070378)
chr1 (58-154)||(3189203-3189299)
chr1 (58-154)||(3198020-3198116)
chr1 (58-154)||(3206859-3206955)
chr1 (168-202)||(19361142-19361176)
chr1 (306-340)||(20762358-20762392)
chr1 (58-188)||(10925062-10925191)
[»] scaffold0565 (1 HSPs)
scaffold0565 (50-449)||(2787-3185)
[»] chr2 (35 HSPs)
chr2 (50-449)||(12647569-12647967)
chr2 (44-450)||(6266273-6266681)
chr2 (58-449)||(4484530-4484923)
chr2 (449-595)||(1556496-1556642)
chr2 (149-449)||(9295862-9296162)
chr2 (78-449)||(30832921-30833293)
chr2 (58-449)||(32289148-32289541)
chr2 (168-451)||(14291844-14292127)
chr2 (149-437)||(25409963-25410253)
chr2 (168-449)||(3492094-3492377)
chr2 (149-449)||(11098387-11098687)
chr2 (650-740)||(1556691-1556781)
chr2 (172-449)||(40739178-40739457)
chr2 (211-449)||(39811477-39811715)
chr2 (326-449)||(32247229-32247352)
chr2 (265-442)||(19344825-19345002)
chr2 (265-436)||(19349683-19349854)
chr2 (374-449)||(44310471-44310546)
chr2 (58-170)||(5723454-5723565)
chr2 (58-154)||(36205863-36205959)
chr2 (58-188)||(39284724-39284853)
chr2 (58-154)||(4503332-4503428)
chr2 (58-154)||(45099627-45099723)
chr2 (137-368)||(28258733-28258963)
chr2 (392-442)||(8389631-8389681)
chr2 (58-154)||(36988275-36988371)
chr2 (390-442)||(36757425-36757477)
chr2 (78-188)||(38312079-38312187)
chr2 (390-437)||(28258682-28258729)
chr2 (58-154)||(2334617-2334713)
chr2 (392-442)||(10706733-10706783)
chr2 (392-442)||(21630511-21630561)
chr2 (392-442)||(33528105-33528155)
chr2 (392-442)||(39483443-39483493)
chr2 (401-442)||(20522797-20522838)
[»] chr6 (52 HSPs)
chr6 (50-451)||(33342289-33342690)
chr6 (44-449)||(16554454-16554859)
chr6 (44-449)||(16578696-16579101)
chr6 (44-449)||(16616279-16616684)
chr6 (44-449)||(16631010-16631415)
chr6 (50-449)||(6026834-6027232)
chr6 (50-449)||(34166666-34167064)
chr6 (50-449)||(34164444-34164842)
chr6 (44-341)||(25421000-25421295)
chr6 (144-449)||(6136241-6136547)
chr6 (44-449)||(16652716-16653102)
chr6 (50-441)||(27647476-27647847)
chr6 (212-449)||(25420797-25421034)
chr6 (44-449)||(411685-412091)
chr6 (44-451)||(3072938-3073345)
chr6 (149-437)||(5674242-5674530)
chr6 (229-441)||(13150857-13151070)
chr6 (168-449)||(22709362-22709645)
chr6 (58-436)||(2171730-2172090)
chr6 (265-449)||(6438899-6439083)
chr6 (282-449)||(30125018-30125185)
chr6 (211-449)||(11857330-11857567)
chr6 (211-442)||(16839092-16839323)
chr6 (211-449)||(22010189-22010427)
chr6 (58-225)||(6097632-6097800)
chr6 (230-388)||(5266453-5266611)
chr6 (269-449)||(14741926-14742106)
chr6 (265-442)||(33329940-33330117)
chr6 (265-442)||(33335437-33335614)
chr6 (211-388)||(28155132-28155309)
chr6 (265-442)||(6005822-6005999)
chr6 (326-449)||(6097862-6097986)
chr6 (265-442)||(5343880-5344057)
chr6 (346-449)||(34151828-34151931)
chr6 (374-451)||(26253587-26253665)
chr6 (58-154)||(31404873-31404970)
chr6 (231-320)||(6097786-6097877)
chr6 (392-449)||(14737085-14737142)
chr6 (374-437)||(23896881-23896944)
chr6 (58-154)||(5406398-5406494)
chr6 (58-154)||(5410723-5410819)
chr6 (269-341)||(14737174-14737246)
chr6 (60-188)||(30834738-30834865)
chr6 (58-154)||(16452529-16452625)
chr6 (78-154)||(5413613-5413688)
chr6 (211-320)||(26253698-26253808)
chr6 (392-442)||(5016976-5017026)
chr6 (411-449)||(5266615-5266653)
chr6 (58-154)||(9183231-9183327)
chr6 (392-442)||(31085953-31086003)
chr6 (58-156)||(33160553-33160652)
chr6 (58-188)||(33211385-33211514)
[»] chr8 (46 HSPs)
chr8 (50-449)||(42575508-42575909)
chr8 (44-449)||(3439088-3439494)
chr8 (44-388)||(25689603-25689945)
chr8 (50-449)||(15290143-15290508)
chr8 (50-449)||(15470512-15470877)
chr8 (44-449)||(2627318-2627725)
chr8 (149-449)||(4759534-4759834)
chr8 (230-449)||(33037287-33037506)
chr8 (175-450)||(36979741-36980015)
chr8 (191-449)||(30656025-30656282)
chr8 (149-451)||(18852625-18852927)
chr8 (149-436)||(1261428-1261717)
chr8 (265-450)||(39784324-39784509)
chr8 (149-449)||(18870021-18870321)
chr8 (168-449)||(26288234-26288517)
chr8 (168-449)||(26301491-26301774)
chr8 (168-449)||(26313485-26313768)
chr8 (265-451)||(10683737-10683923)
chr8 (211-450)||(7289426-7289666)
chr8 (230-442)||(6311717-6311928)
chr8 (265-442)||(35745794-35745971)
chr8 (269-449)||(25327664-25327844)
chr8 (326-451)||(31042906-31043032)
chr8 (149-388)||(10688660-10688900)
chr8 (285-437)||(7412787-7412939)
chr8 (392-449)||(25689561-25689618)
chr8 (58-188)||(34254529-34254657)
chr8 (58-170)||(31218114-31218225)
chr8 (392-449)||(10688618-10688675)
chr8 (58-188)||(17982492-17982621)
chr8 (58-188)||(34256705-34256833)
chr8 (213-320)||(31043017-31043125)
chr8 (168-246)||(31043112-31043189)
chr8 (58-188)||(1746418-1746547)
chr8 (58-188)||(43036262-43036391)
chr8 (392-442)||(5701959-5702009)
chr8 (78-154)||(30143214-30143289)
chr8 (58-156)||(33352020-33352118)
chr8 (91-188)||(19948554-19948650)
chr8 (306-340)||(1746666-1746700)
chr8 (58-154)||(12702838-12702934)
chr8 (58-154)||(15212658-15212754)
chr8 (306-340)||(34256952-34256986)
chr8 (58-154)||(44303726-44303822)
chr8 (392-437)||(4456575-4456620)
chr8 (78-154)||(42498066-42498141)
[»] scaffold0491 (2 HSPs)
scaffold0491 (58-449)||(11361-11753)
scaffold0491 (78-449)||(8956-9308)
[»] scaffold0464 (1 HSPs)
scaffold0464 (265-449)||(761-945)
[»] scaffold0286 (1 HSPs)
scaffold0286 (84-436)||(21953-22286)
[»] scaffold0188 (2 HSPs)
scaffold0188 (231-449)||(17431-17652)
scaffold0188 (149-202)||(17661-17715)
[»] scaffold1519 (1 HSPs)
scaffold1519 (58-409)||(523-885)
[»] scaffold0355 (1 HSPs)
scaffold0355 (211-449)||(3337-3575)
[»] scaffold0197 (2 HSPs)
scaffold0197 (232-442)||(18671-18880)
scaffold0197 (265-442)||(13791-13968)
[»] scaffold0259 (1 HSPs)
scaffold0259 (211-442)||(1746-1977)
[»] scaffold0135 (1 HSPs)
scaffold0135 (232-451)||(34552-34770)
[»] scaffold0028 (1 HSPs)
scaffold0028 (211-442)||(148451-148682)
[»] scaffold1455 (1 HSPs)
scaffold1455 (374-449)||(1709-1784)
[»] scaffold0009 (1 HSPs)
scaffold0009 (265-451)||(176448-176634)
[»] scaffold0006 (4 HSPs)
scaffold0006 (211-449)||(132752-132991)
scaffold0006 (392-442)||(6252-6302)
scaffold0006 (144-340)||(2811-3008)
scaffold0006 (392-442)||(3060-3110)
[»] scaffold0140 (1 HSPs)
scaffold0140 (326-449)||(7911-8035)
[»] scaffold0002 (2 HSPs)
scaffold0002 (58-154)||(434405-434501)
scaffold0002 (306-340)||(434218-434252)
[»] scaffold0665 (2 HSPs)
scaffold0665 (392-449)||(8216-8273)
scaffold0665 (269-341)||(8112-8184)
[»] scaffold0510 (1 HSPs)
scaffold0510 (374-437)||(1096-1159)
[»] scaffold0087 (1 HSPs)
scaffold0087 (285-437)||(43447-43599)
[»] scaffold0098 (1 HSPs)
scaffold0098 (390-449)||(45744-45804)


Alignment Details
Target: scaffold0137 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 6258 - 5859
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6258 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgatttcccaagtctctctc 6159  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6158 tcttccaacctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 6060  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgcaccc 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||    
T  6059 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcaccc 5960  T
Q  349 tgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 448  Q
    || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5959 tgcaaccctagctcacggcacctccaatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 5860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 338; Significance: 0; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 40380076 - 40379678
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  40380076 tctctctacaaggtgtttcccatgttttcaacccgagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 40379977  T
Q  150 tcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 248  Q
    |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40379976 t--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 40379879  T
Q  249 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccc 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||    
T  40379878 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccc 40379779  T
Q  349 tgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 448  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40379778 tgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 40379679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 16546615 - 16546216
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  16546615 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 16546516  T
Q  150 tcttccaacctctt--cttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    |  |||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16546515 t--tccaacctcttgccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttg 16546418  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||||    
T  16546417 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcacc 16546318  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16546317 ctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaa 16546218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 40382287 - 40381889
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  40382287 tctctctacaaggtgtttcccatgttttcaacccgagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 40382188  T
Q  150 tcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 248  Q
    |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40382187 t--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 40382090  T
Q  249 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccc 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||    
T  40382089 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccc 40381990  T
Q  349 tgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 448  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40381989 tgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaatctcaac 40381890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 16544393 - 16543994
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  16544393 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 16544294  T
Q  150 tcttccaacctctt--cttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    |  |||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16544293 t--tccaacctcttgccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttg 16544196  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||||    
T  16544195 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcacc 16544096  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16544095 ctgtaaccctagctcacagcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaa 16543996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 25078110 - 25077706
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  25078110 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtc 25078011  T
Q  144 tctctctcttccaacctcttc-ttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||||  |||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25078010 tctctct--tccaacctctcccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacg 25077913  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||    
T  25077912 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacga-ttt 25077814  T
Q  343 gca-ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    ||| ||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25077813 gcacccctacaaccctagctcacggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 25077714  T
Q  442 tctcaaca 449  Q
     |||||||    
T  25077713 actcaaca 25077706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 25136079 - 25135675
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  25136079 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtc 25135980  T
Q  144 tctctctcttccaacctcttc-ttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||||  |||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25135979 tctctct--tccaacctctcccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacg 25135882  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||    
T  25135881 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacga-ttt 25135783  T
Q  343 gca-ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    ||| ||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25135782 gcacccctacaaccctagctcacggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 25135683  T
Q  442 tctcaaca 449  Q
     |||||||    
T  25135682 actcaaca 25135675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 44 - 451
Target Start/End: Complemental strand, 10593248 - 10592842
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  10593248 tgattctctctttacaaggtgtttcccatgttttctacccaagagatactctaatcaaagaaccctaaaccctagagttccccctttgatttcccaagtc 10593149  T
Q  144 tctctctcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||||||||| ||  |||||||||||||||| || ||||||||||||    
T  10593148 tctctctcttccaac-tctctcttcaaatctgcacaagaacacttacatactagtcttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacg 10593050  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    || ||||| |  || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||    
T  10593049 atctgcgtaccaccgaagaaacgaccagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttt 10592950  T
Q  343 gcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| || |||| |||||||||||   |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10592949 gcaccctgcaa-cctatctcacggcacccggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 10592851  T
Q  443 ctcaacaga 451  Q
    |||||||||    
T  10592850 ctcaacaga 10592842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 61 - 449
Target Start/End: Original strand, 22536482 - 22536852
Alignment:
Q  61 ggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctct--tccaa 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||| |||||||||||||||||  |||||    
T  22536482 ggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttctccctttgatttcccaagtctctctctctcttccaa 22536581  T
Q  158 cctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcc 256  Q
    | ||| ||||||||||||||||||||||||| | |||||| |||||||| ||             ||       |||||||||||||| || || |  ||    
T  22536582 c-tctctcttcaaatctgcacaagaacacttta-tactagccttcctctgtt-------------ga-------aatcgtgtcacgatctgtgtaccacc 22536659  T
Q  257 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccc 356  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||    
T  22536660 caagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaa-cc 22536758  T
Q  357 tagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||||||||| |  |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22536759 tagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 44 - 449
Target Start/End: Original strand, 29751338 - 29751724
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  29751338 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 29751437  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaag-tactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
    |||||||||||||||| ||| |||||||  ||||||||||||||| |  |||||| |||||||||   |||||||||||||||||||| |||||||||||    
T  29751438 ctctctctcttccaac-tctccttcaaagatgcacaagaacactttatatactagccttcctctaaagcaatcgtgtcacgattttccaaatcgtgtcac 29751536  T
Q  242 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
    ||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||                     ||||||||||||||||    
T  29751537 gatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcac---------------------aatcgtgtcacgattt 29751615  T
Q  342 tgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac- 439  Q
     |||||||| |||| |||||||||||||| | || |||||||  ||| ||||| || || |||||||||||||||||||||||||||||||||||||||     
T  29751616 ggcaccctgcaacc-tagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagaccacaaatttgaagaca 29751714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 58 - 449
Target Start/End: Original strand, 18441840 - 18442233
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  18441840 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaagtttctctctcttcc 18441938  T
Q  156 aacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccg 253  Q
    ||| ||| |||||||||||||||||||||||||| |||||| | ||| ||  |  |||||||||||||||| ||   |||||||||||||  ||||| ||    
T  18441939 aac-tctccttcaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt-ccaggtcgtgtcacgattggtgcgttcg 18442036  T
Q  254 tcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaa 353  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||    |||||||||||||||||||||||||||||||||||| |||||||| ||    
T  18442037 tcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaa 18442136  T
Q  354 ccctagctcacggcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
     || ||||||||||| | |  |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18442137 acc-agctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 18442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 29720354 - 29719965
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  29720354 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 29720255  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
     |||||||||||||| |||| |||||||| ||||||||||||||||| |||  | ||||| ||  |  |||||||||||||||                     
T  29720254 ttctctctcttccaa-ctctccttcaaatttgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgatt----------------- 29720173  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
       ||| |||||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  29720172 -ggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgattt 29720074  T
Q  342 tgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac- 439  Q
     ||||||||  |  ||||||||||||||| |  |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  29720073 ggcaccctg-cagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 29719975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 58 - 449
Target Start/End: Original strand, 9789416 - 9789809
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  9789416 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaagtttctctctcttcc 9789514  T
Q  156 aacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccg 253  Q
    ||| ||| |||||||||||||||||||||||||| |||||| | ||| ||  |  ||||||||||||||||||    ||||||||||| |  ||||| ||    
T  9789515 aac-tctccttcaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattttcagg-tcgtgtcacgaatggtgcgttcg 9789612  T
Q  254 tcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaa 353  Q
    || |||| |||||||||||||||||| ||| |||||||||||||||||    |||||||||||||||||||||||||||||||||||| |||||||| ||    
T  9789613 tcgcaagaaacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaa 9789712  T
Q  354 ccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
     || ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9789713 acc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9789809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 58 - 449
Target Start/End: Complemental strand, 26177859 - 26177466
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| |||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  26177859 caaggtgtttaccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaagtttctctctcttcc 26177761  T
Q  156 aac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtcc 252  Q
    ||| ||||||   |||||||| ||||||||||||| |||||| | ||| ||  |  |||||||||||||||| ||   |||||||||||||  |||||||    
T  26177760 aactctcttca--aaatctgcgcaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt-ccaggtcgtgtcacgattggtgcgtcc 26177664  T
Q  253 gtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaa 352  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||||||||||||  ||||||||||||||| |||||||| |    
T  26177663 gtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgca 26177564  T
Q  353 accctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    | || ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  26177563 aacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 26177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 58 - 437
Target Start/End: Complemental strand, 26170750 - 26170370
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| |||||||| | |||||||||||  || |||||||||| | ||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  26170750 caaggtgtttaccatgtttcccaacccaagagaagctgtaatcaaaga-ctctaaaccctagagttactccctttgatttcccaagtttctctctcttcc 26170652  T
Q  156 aac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtcc 252  Q
    ||| ||||||   |||||||||||||||||||||| |||||| | ||| ||  |  |||||||||||||| | ||   |||||||||||||  |||||||    
T  26170651 aactctcttca--aaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatat-ccaggtcgtgtcacgattggtgcgtcc 26170555  T
Q  253 gtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaa 352  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||  |||||||||||||||| ||||||||||||||| |||||||| |    
T  26170554 gtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgca 26170455  T
Q  353 accctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    | || ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  26170454 aacc-agctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaag 26170370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 149 - 436
Target Start/End: Original strand, 24136183 - 24136470
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacacttaag-tactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| || ||||  ||||||||||||||| |  ||||||  |||||||  | |||||||| |||||||| ||  ||||||||||||||||    
T  24136183 ctcttccaagctctactccaaaaatgcacaagaacactttatatactagctttcctctgatacaatcgtgccacgattt-ccagatcgtgtcacgatttg 24136281  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||| |||||||||| | ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||  ||||||||||||||| |||||    
T  24136282 cgtacgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 24136381  T
Q  348 ctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 436  Q
    ||| ||  ||||||||||||| | |  ||| |||||||||| ||||| ||||| |||||||||  |||||||||||||||||||||||||    
T  24136382 ctgcaa-actagctcacggcatcacgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaa 24136470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 210 - 449
Target Start/End: Original strand, 27450171 - 27450409
Alignment:
Q  210 caatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    |||||||| |||||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  27450171 caatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 27450269  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  |||||| |||||||| ||  |||| || | ||||||||||| |||  || |||||||||||| ||||||||||| ||||||||    
T  27450270 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 27450368  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  27450369 ctctgttcttccagaccacaaatttgaagccaatatcaaca 27450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 210 - 449
Target Start/End: Original strand, 43599079 - 43599318
Alignment:
Q  210 caatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||||||||||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  43599079 caatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 43599177  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacc--tccaatcgtgtcacgattccaaaatcgtggcacgatt 407  Q
    |||||||||||||||  |||||| |||||||| ||  |||| ||  |||||||||||| ||  |  |||||||||||||  ||||||||||| |||||||    
T  43599178 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa-actagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatt 43599276  T
Q  408 tccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    || ||||||||||||||||||||||||||| |||| ||||||    
T  43599277 tctctgttcttccagaccacaaatttgaagccaatatcaaca 43599318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 210 - 449
Target Start/End: Original strand, 43604571 - 43604810
Alignment:
Q  210 caatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||||||||||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  43604571 caatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 43604669  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacc--tccaatcgtgtcacgattccaaaatcgtggcacgatt 407  Q
    |||||||||||||||  |||||| |||||||| ||  |||| ||  |||||||||||| ||  |  |||||||||||||  ||||||||||| |||||||    
T  43604670 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa-actagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatt 43604768  T
Q  408 tccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    || ||||||||||||||||||||||||||| |||| ||||||    
T  43604769 tctctgttcttccagaccacaaatttgaagccaatatcaaca 43604810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 210 - 449
Target Start/End: Original strand, 43610063 - 43610302
Alignment:
Q  210 caatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||||||||||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  43610063 caatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 43610161  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacc--tccaatcgtgtcacgattccaaaatcgtggcacgatt 407  Q
    |||||||||||||||  |||||| |||||||| ||  |||| ||  |||||||||||| ||  |  |||||||||||||  ||||||||||| |||||||    
T  43610162 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa-actagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatt 43610260  T
Q  408 tccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    || ||||||||||||||||||||||||||| |||| ||||||    
T  43610261 tctctgttcttccagaccacaaatttgaagccaatatcaaca 43610302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 210 - 449
Target Start/End: Original strand, 27445328 - 27445566
Alignment:
Q  210 caatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    |||||||| |||||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  27445328 caatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 27445426  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  |||||| |||||||| ||  |||| || | ||||||||||| |||  || |||||||||||| ||||||||||| ||||||||    
T  27445427 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 27445525  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||| ||||||||||||||||| |||| ||||||    
T  27445526 ctctgttcttctagaccacaaatttgaagccaatatcaaca 27445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 44 - 226
Target Start/End: Complemental strand, 29722514 - 29722332
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  29722514 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 29722415  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattt 226  Q
     ||||||| |||||| |||| |||||||||||||||||||||||||| |||  | ||||| ||  |  ||||||||||||||||    
T  29722414 ttctctcttttccaa-ctctccttcaaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 265 - 450
Target Start/End: Original strand, 30631764 - 30631949
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||| ||  |||| || | | ||||||    
T  30631764 gaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaac-tggctcac 30631862  T
Q  365 ggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 450  Q
    |||||||| || |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  30631863 ggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 30631949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 271 - 449
Target Start/End: Complemental strand, 29722332 - 29722152
Alignment:
Q  271 tccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcac 369  Q
    ||||||||| ||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||| ||  |  ||||||||| ||||    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatg-cagactagctcacagcac 29722234  T
Q  370 ctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    | |  |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29722233 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 191 - 449
Target Start/End: Complemental strand, 1456896 - 1456638
Alignment:
Q  191 tactagtcttcctctattccaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatactta 289  Q
    ||||||||||||||||    ||||||| |||||||| || | | ||||||||||||||| || | ||||||| | ||| ||||||||||| |||||||||    
T  1456896 tactagtcttcctctaaagaaatcgtgccacgatttcccaagaccgtgtcacgatttgcatctgacccaaggta-gacaagtccttatcagggatactta 1456798  T
Q  290 acgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgatt 388  Q
    || ||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| || | ||||||||||| |||  || ||||||||||||     
T  1456797 acaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaac-tagctcacggccccttgaaatcgtgtcacgatg 1456699  T
Q  389 ccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1456698 ccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 1456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 28807260 - 28807083
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| | ||||||||  ||||||||||||||||||||  |||||| ||||||||||||||||| || | | ||||||    
T  28807260 gaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcac 28807161  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| |||  |||||||||||||| |||||||||| ||||||| | |||||||||||||||| |||||||||| ||||    
T  28807160 ggcatctcagatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 231 - 451
Target Start/End: Complemental strand, 16407862 - 16407639
Alignment:
Q  231 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaat 328  Q
    ||||||||||||||| |  ||| |||||||||| |||||| |||||||||| ||| |||||||||||||||||    |||||||||||||| | ||  ||    
T  16407862 aatcgtgtcacgattggagcgtacgtcccaaggtacgaccggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagat 16407763  T
Q  329 cgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccac 427  Q
    ||||||||||||| |||||||| || || ||||||||||| | | || ||||||||||||  |||| ||||| ||||||||| |||||||||||||||||    
T  16407762 cgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccac 16407664  T
Q  428 aaatttgaagac-aatctcaacaga 451  Q
    |||||||||| | ||||||||||||    
T  16407663 aaatttgaagccaaatctcaacaga 16407639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 15045096 - 15045279
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  ||||||||| |||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| || | | ||||||    
T  15045096 gaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcac 15045194  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||||| |||| ||||||    
T  15045195 ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaatatcaaca 15045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 449
Target Start/End: Complemental strand, 16409451 - 16409077
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| |||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  16409451 caaggtgtttaccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaagtttctctctcttcc 16409353  T
Q  156 aac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgt 254  Q
    ||| ||||||   |||||||||||||||||||||| ||||||   ||| ||| |  |||||||||||||||                ||   |||| |||    
T  16409352 aactctcttca--aaatctgcacaagaacacttaaatactagctctccactaataaaatcgtgtcacgattg---------------ga---gcgtacgt 16409273  T
Q  255 cccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaac 354  Q
    ||||| | ||||||||||||||||| ||| |||||||||||||||||    |||||||||||||| | ||  |||||||||| |||| ||||| || ||     
T  16409272 cccaatgtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaa 16409173  T
Q  355 cctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    || |||||||| || | |  |||||||||||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  16409172 cc-agctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 168 - 320
Target Start/End: Original strand, 35388016 - 35388169
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| |||||| ||||||||  |  |||||||||||||||| ||  ||||||||||||||||  ||| |||||||||| | |    
T  35388016 aaatctgcacaagaacacttaaatactagccttcctctgataaaatcgtgtcacgattt-ccagatcgtgtcacgatttgaacgtacgtcccaaggtatg 35388114  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 320  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||| ||||    
T  35388115 accagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 210 - 341
Target Start/End: Original strand, 43592634 - 43592764
Alignment:
Q  210 caatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||||||||||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  43592634 caatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 43592732  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattt 341  Q
    |||||||||||||||  |||||| ||||||||    
T  43592733 tgtcacgatttcccaagatcgtgccacgattt 43592764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 2785778 - 2785955
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | ||||||    
T  2785778 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 2785877  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| |||| |||||||||||||| | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  2785878 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 2785955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 33768587 - 33768764
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | ||||||    
T  33768587 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33768686  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| |||| |||||||||||||| | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  33768687 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33768764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 33791719 - 33791896
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | ||||||    
T  33791719 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33791818  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| |||| |||||||||||||| | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  33791819 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33791896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 271 - 449
Target Start/End: Complemental strand, 29402728 - 29402550
Alignment:
Q  271 tccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc-ac 369  Q
    |||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| || | ||||||| ||| ||    
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcatggccac 29402630  T
Q  370 ctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
     |  ||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  29402629 ttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 29402550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 266 - 437
Target Start/End: Complemental strand, 37556308 - 37556137
Alignment:
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    ||||||||||||||  |||||||||| ||||||||||  ||||||||||| ||||||||  |||||| ||||||||  | || | ||| | | |||||||    
T  37556308 accagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37556209  T
Q  366 gcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||| |||  |||||||||||||| | |||||||| ||||||| | |||||||||||||||||||||||||||    
T  37556208 gcatctcagatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaag 37556137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 266 - 437
Target Start/End: Complemental strand, 37561130 - 37560959
Alignment:
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    ||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||  |||||| ||||||||  | || | ||| | | |||||||    
T  37561130 accagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37561031  T
Q  366 gcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||| |||  ||||||||||||||   |||||||| ||||||| | |||||||||||||||||||||||||||    
T  37561030 gcatctcagatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaag 37560959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 325 - 449
Target Start/End: Original strand, 29752265 - 29752390
Alignment:
Q  325 caatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaga 423  Q
    |||||||| |||||||| |||||||| |||| |||||||||||| | | || |||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  29752265 caatcgtgccacgatttggcaccctgcaacc-tagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccaga 29752363  T
Q  424 ccacaaatttgaagac-aatctcaaca 449  Q
    |||||||||||||||| ||||||||||    
T  29752364 ccacaaatttgaagacaaatctcaaca 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 149 - 349
Target Start/End: Original strand, 38219732 - 38219929
Alignment:
Q  149 ctcttccaacctcttcttcaaa-tctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    |||||| || |||||||||||| ||||||||||||||||     ||||| ||||||||  |  ||| |||||||||||| || ||||||||||||||| |    
T  38219732 ctcttcaaagctcttcttcaaaatctgcacaagaacact-----actagccttcctctgataaaattgtgtcacgattt-ccaaatcgtgtcacgattgg 38219825  T
Q  248 --cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca 345  Q
      ||| |||| ||||| ||||||||||||||||| ||| ||||||| ||||||||| |  |||||||||| ||||||||  ||||||||||||||| |||    
T  38219826 aacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggca 38219925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 168 - 449
Target Start/End: Complemental strand, 9353089 - 9352807
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| ||| |||||||  ||  |  ||||||| |||| |||||| ||||||| |||||||  |  || || ||||||| |||    
T  9353089 aaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacg-ttttccaaatcgtgccacgattgatatgtacgacccaaggtacg 9352991  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    ||||  |||||||  | | ||||||| ||||||||| |  |||||||||||||||| || ||||||| ||||||||  ||||||| || || ||||||||    
T  9352990 accaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaacc-agctcacg 9352893  T
Q  366 gcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    |||   | || |||||||||||| ||| ||||| | ||||||||| |||||||| || ||||||||||||||| | ||||||||||    
T  9352892 gcattacaaaatcgtgtcacgatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaaatctcaaca 9352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 31396674 - 31396497
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  || ||||||| | ||||| ||   |||||||||||||||||||  |||||| |||||||||||  || | || | ||||||||    
T  31396674 gaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcac 31396575  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  |||| |||||||||||||| | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  31396574 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 31396497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 15465001 - 15465127
Alignment:
Q  326 aatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagac 424  Q
    |||||||||||||||| |||||||| || || ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||| |||||||| |||||    
T  15465001 aatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagac 15465099  T
Q  425 cacaaatttgaagac-aatctcaacaga 451  Q
    ||||||||||||| | ||||||||||||    
T  15465100 cacaaatttgaagccaaatctcaacaga 15465127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 31401531 - 31401354
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  || ||||||  ||||||||||   ||| |||||||||||||||  |||||| |||||||||||  || | || | ||||||||    
T  31401531 gaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcac 31401432  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  |||| |||||||||||||| | |||||||| ||||||| | || |||| ||| ||||||||||||||| ||||    
T  31401431 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaat 31401354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 191 - 341
Target Start/End: Original strand, 31180591 - 31180741
Alignment:
Q  191 tactagtcttcctctattccaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatactta 289  Q
    |||||||||||||||    |||||||| |||||||| || | ||| |||||||||||||||| | |||||||   |||||||||||||||  ||||||||    
T  31180591 tactagtcttcctctgaagcaatcgtgccacgatttcccaagatcatgtcacgatttgcgtctgacccaaggtt-gaccagtccttatcagtgatactta 31180689  T
Q  290 acgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
    ||||| |||| ||   |||||||||||||||||||  |||||| ||||||||    
T  31180690 acgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgattt 31180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 326 - 437
Target Start/End: Complemental strand, 36931967 - 36931856
Alignment:
Q  326 aatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagac 424  Q
    |||||||||||||||| |||||||| || || |||||||| || | |  ||||||| |||||| ||||| ||||| ||||||||| ||||||||||| ||    
T  36931967 aatcgtgtcacgatttggcaccctgcaaacc-agctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaac 36931869  T
Q  425 cacaaatttgaag 437  Q
    |||||||||||||    
T  36931868 cacaaatttgaag 36931856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 25412730 - 25412601
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||  |||||| ||||||||| ||||||| |||||||||| |    
T  25412730 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaatgttgcctcctttgatttcccaagtttctctctctt-c 25412634  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || |||| |||| ||||||||| |||||||||||    
T  25412633 aagctctccttcaaaatctgca-aagaacactta 25412601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 449
Target Start/End: Original strand, 31180773 - 31180830
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 31180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 36074244 - 36074373
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||| |    
T  36074244 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctctt-c 36074340  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || |||| |||| ||||||||| |||||||||||    
T  36074341 aagctctccttcaaaatctgca-aagaacactta 36074373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 449
Target Start/End: Original strand, 43592797 - 43592854
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43592854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 13488171 - 13488075
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||||| ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  13488171 caaggtgtttacaatgttttccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 13488075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 13343029 - 13342900
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||| ||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||| |    
T  13343029 caaggtgtttacaatgtttcccaacccaagaga-actctaatcagaga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctctt-c 13342933  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || |||| |||| ||||||||| |||||||||||    
T  13342932 aagctctccttcaaaatctgca-aagaacactta 13342900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 28750855 - 28750985
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||| |    
T  28750855 caaggtgttttcaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt-c 28750951  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || ||||  ||| ||||||||| |||||||||||    
T  28750952 aagctctctttcaaaatctgcataagaacactta 28750985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 14520796 - 14520846
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 14520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 30182557 - 30182461
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||| ||||| ||||||  ||||||||| ||||||| |||||||||||    
T  30182557 caaggtgtttgcaatgtttcccaacccaagaga-actctaatcaaaga-ccctaatccctaaagttgcttcctttgatttcccaagtttctctctcttc 30182461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 35388197 - 35388247
Alignment:
Q  401 cacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacag 450  Q
    ||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  35388197 cacgatttctctgttcttccagaccacaaatttgaagtcaaatctcaacag 35388247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 15464876 - 15464952
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt 245  Q
    |||||||||||||||||||||| |||||||||||  ||  |  ||||||| ||||| ||||| |||||||||||||||    
T  15464876 aaatctgcacaagaacacttaaatactagtcttctactgataaaatcgtgccacga-tttccaaatcgtgtcacgatt 15464952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 557
Target Start/End: Original strand, 30468668 - 30468703
Alignment:
Q  522 gacctaaacttattccctttctccaggtactcaatc 557  Q
    |||||||||||||||||| |||||||||||||||||    
T  30468668 gacctaaacttattccctctctccaggtactcaatc 30468703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 406 - 449
Target Start/End: Original strand, 43625605 - 43625648
Alignment:
Q  406 tttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 43625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 533737 - 533626
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||| || ||||| |||| || ||||||||| ||||| | |||||||||| |    
T  533737 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagacccccaa-ccctaaagttacctcctttgatttcccaaatttctctctctt-c 533641  T
Q  156 aacctcttcttcaaa 170  Q
    ||||||| |||||||    
T  533640 aacctctccttcaaa 533626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 39468749 - 39468845
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||| ||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  39468749 caaggtgtttacaatgtttcccaacccaagaga-actctaatgaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 39468845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 16407947 - 16407877
Alignment:
Q  125 ccctttgattccccaagtctctctctcttccaac-ctcttcttcaaatctgcacaagaacacttaagtactag 196  Q
    ||||||||||  |||||| ||||||||||||||| ||||||   ||||||||||||||| |||||| ||||||    
T  16407947 ccctttgattttccaagtttctctctcttccaactctcttc--aaaatctgcacaagaatacttaaatactag 16407877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 30683120 - 30683249
Alignment:
Q  58 caaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | ||||||  |||||||||||| |||||||||||||| |||| ||||||| | || || ||| ||||| ||||||| |||||||||| |    
T  30683120 caaggtgtttacaatgtttcgcaacccaagaga-actctaatcaaaga-ccctcaaccctaaaattacctcctctgatttcccaagtttctctctctt-c 30683216  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || |||| |||| ||||||||| |||||||||||    
T  30683217 aagctctccttcaaaatctgca-aagaacactta 30683249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 50 - 451
Target Start/End: Original strand, 18392379 - 18392782
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  18392379 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 18392478  T
Q  150 tcttccaacctctt----cttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt 245  Q
    |  ||||||  |||    || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18392479 t--tccaactcctttactctccaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt 18392576  T
Q  246 tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  18392577 tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgca 18392676  T
Q  346 ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctc 445  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18392677 ccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctc 18392776  T
Q  446 aacaga 451  Q
    ||||||    
T  18392777 aacaga 18392782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 50 - 449
Target Start/End: Original strand, 6592523 - 6592921
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  6592523 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 6592622  T
Q  150 tcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 248  Q
    |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6592623 t--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 6592720  T
Q  249 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca-cc 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| ||||| |||||| ||    
T  6592721 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-tttgcaccc 6592819  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||||||||||||| |   |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6592820 ctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 6592919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 50 - 449
Target Start/End: Original strand, 6594741 - 6595137
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  6594741 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 6594840  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    |  |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6594841 t--tccaacctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 6594937  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca-ccc 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| ||||| |||||| |||    
T  6594938 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-tttgcacccc 6595036  T
Q  349 tgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 448  Q
    || ||||||||||||||||| |   |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6595037 tgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaatctcaac 6595136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 50 - 449
Target Start/End: Original strand, 1562187 - 1562587
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  1562187 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgattccccaagtctctctc 1562286  T
Q  150 tcttccaac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 248  Q
    ||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1562287 tcttccaactctctccttcaaatctgcacaagaacacataaatactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 1562386  T
Q  249 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccc 348  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||   ||||    
T  1562387 gtccgtcacaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgatttaaaaccc 1562486  T
Q  349 tgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 448  Q
      ||| |  |    | |  ||    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1562487 aaaaaacaaaaaaaaagaaacacgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 1562586  T
Q  449 a 449  Q
    |    
T  1562587 a 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 44 - 449
Target Start/End: Original strand, 32060503 - 32060888
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||    
T  32060503 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttaccctttgatttcccaagtc 32060602  T
Q  144 tctctctcttccaacctcttc--ttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
    |||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||                    |||||||||    
T  32060603 tctctct--tccaacctcttcccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaa--------------------tcgtgtcac 32060680  T
Q  242 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| ||||| ||    
T  32060681 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacga-tt 32060779  T
Q  342 tgca-ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagaca 440  Q
    |||| ||||| ||||||||||||||||| |   |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32060780 tgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 32060879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 50 - 350
Target Start/End: Original strand, 18388943 - 18389245
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  18388943 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 18389042  T
Q  150 tcttccaacctctt----cttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt 245  Q
    |  ||||||  |||    || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18389043 t--tccaactcctttactctccaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt 18389140  T
Q  246 tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  18389141 tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgca 18389240  T
Q  346 ccctg 350  Q
    |||||    
T  18389241 ccctg 18389245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 24789831 - 24789426
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  24789831 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 24789732  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaag-tactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
    ||||||||  |||||||||| |||||||  ||||||||||||||| |  |||||| ||||||||    ||||||||||||||||| || ||||||||||     
T  24789731 ctctctct--tccaacctctccttcaaagatgcacaagaacactttatatactagccttcctctgaagcaatcgtgtcacgattt-ccaaatcgtgtcaa 24789635  T
Q  242 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
    ||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||||    
T  24789634 gatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgattt 24789535  T
Q  342 tgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac- 439  Q
     |||||||| ||  ||||||||||||||| |  |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  24789534 ggcaccctgcaa-actagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 24789436  T
Q  440 aatctcaaca 449  Q
    ||||||||||    
T  24789435 aatctcaaca 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 44 - 450
Target Start/End: Complemental strand, 20343887 - 20343499
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20343887 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattccccaagt 20343788  T
Q  143 ctctctctcttccaac-ctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtca 240  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||| | ||||||||||||||| ||             ||       ||||||||||    
T  20343787 ctctctctcttccaaaactctctcttcaaatctgcacaagaacacttta-tactagtcttcctctgtt-------------ga-------aatcgtgtca 20343709  T
Q  241 cgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    |||| ||||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20343708 cgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgatt 20343609  T
Q  341 ttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac 439  Q
    ||||| || | || |||||||||||||||| |  |||||||||||||| ||| ||||| | |||||||||||||||||||||||||||||||||||||||    
T  20343608 ttgcatccggcaa-cctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagac 20343510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 149 - 449
Target Start/End: Original strand, 2058304 - 2058604
Alignment:
Q  149 ctcttccaacctct-tcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgattt 246  Q
    ||||||||| |||| | |||||||||||||||||||||  ||  |||||| ||||||||    |||||||| |||||||| ||  |||||||||||||||    
T  2058304 ctcttccaagctctcttttcaaatctgcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgattt 2058402  T
Q  247 gcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcac 346  Q
    |||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||      
T  2058403 gcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgt 2058502  T
Q  347 cctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    |||| || | |||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||    
T  2058503 cctgcaaac-tagctcacggcacctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 2058601  T
Q  447 aca 449  Q
    |||    
T  2058602 aca 2058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 44 - 437
Target Start/End: Original strand, 43504333 - 43504708
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaag 141  Q
    ||||| ||||| | ||||||||||||||||||| | || ||||||||  ||||||||||||| | ||||||||||||||| | |||||||||| ||||||    
T  43504333 tgattttctctcttcaaggtgtttcccatgtttcccaagccaagagaagctctaatcaaaga-ctctaaaccctagagtttctccctttgatttcccaag 43504431  T
Q  142 tctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
    | |||||||||||||||| |||||||||||||||||| |||||||||| |||||| | ||| ||  |  |||||||||||||||                    
T  43504432 tttctctctcttccaacc-cttcttcaaatctgcacaggaacacttaaatactagccctccactgataaaatcgtgtcacgatt---------------- 43504514  T
Q  242 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
        ||| || ||||||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||||||||||||| |||||||||||||||    
T  43504515 --ggtgcatctgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgattt 43504612  T
Q  342 tgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
     |||||||| || || ||||||||||| | |  |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  43504613 ggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 43504708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 230 - 449
Target Start/End: Original strand, 21640204 - 21640423
Alignment:
Q  230 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatc 329  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||| |||||||||||   |||||||||||||||||||  |||    
T  21640204 caatcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 21640303  T
Q  330 gtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccaca 428  Q
    |||||||||||| ||  |||| ||  |||||||||||||||||  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  21640304 gtgtcacgatttggcgtcctgcaa-actagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccaca 21640402  T
Q  429 aatttgaagacaatctcaaca 449  Q
    ||||||||| |||| ||||||    
T  21640403 aatttgaagccaatatcaaca 21640423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 21646360 - 21646630
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| |||||| ||||||||  |  |||||||||||||||| ||  |||||| |||||||||  ||| |||||||||| | |    
T  21646360 aaatctgcacaagaacacttaaatactagccttcctctgataaaatcgtgtcacgattt-ccagatcgtggcacgatttgaacgtacgtcccaaggtatg 21646458  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    |||||| ||||||||||||||||||||||||||||| |  ||||||||||||||| |||  ||||||||||||||| |||||||| || || ||||||||    
T  21646459 accagttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 21646557  T
Q  366 gcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||| | |  |||||||||||||| ||||| | ||| ||||||||| ||||||||||| |||||||||||||||    
T  21646558 gcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 58 - 449
Target Start/End: Complemental strand, 39731345 - 39730933
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | |||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  39731345 caaggtgtttacaatgtttcccaacccaagagaagctctaatcaaaga-ccctaaaccctagagttactccctttgatttcccaagtttctctctcttcc 39731247  T
Q  156 aac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttc-----------------cca-atcgt 236  Q
    ||| ||||||   |||||||||||||||||||||| |||||| |||||  |  |  ||||||||||||||||||                 ||| |||||    
T  39731246 aactctcttca--aaatctgcacaagaacacttaaatactagccttccattgataaaatcgtgtcacgattttcagatcgtgtcacgatttccagatcgt 39731149  T
Q  237 gtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtc 334  Q
    ||||||||| |  ||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||||||| | ||  ||||||||    
T  39731148 gtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtc 39731049  T
Q  335 acgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaattt 433  Q
    ||||||| |||||||| || || ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||    
T  39731048 acgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaattt 39730950  T
Q  434 gaagac-aatctcaaca 449  Q
    |||| | ||||||||||    
T  39730949 gaagccaaatctcaaca 39730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 84 - 437
Target Start/End: Original strand, 25767180 - 25767527
Alignment:
Q  84 aagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttccaacctcttcttcaaa-tctgcacaaga 181  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||||||| | ||||| |||||||||||  | |||| ||||||| |||||||||||    
T  25767180 aagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttctcaagtttctctctcttc--agctctccttcaaaatctgcacaaga 25767276  T
Q  182 acacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatca 279  Q
    |||||||| ||||||||||||  |  |  |||||||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||||| |||||||||     
T  25767277 acacttaaatactagtcttccattgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggcacgacctgtccttatcc 25767375  T
Q  280 aggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcg 378  Q
      || ||||||||||||||||| |  ||||||||||||||||||| |||||||||||||||| |||||||| || || ||||||||||| | |  |||||    
T  25767376 tagaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacgaaatcg 25767474  T
Q  379 tgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||||||||| ||||| | ||| |||||||||       |||||||||||||||||||||    
T  25767475 tgtcacgatgccaaatttgtgtcacgatttc------tttccagaccacaaatttgaag 25767527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 168 - 449
Target Start/End: Original strand, 18409116 - 18409399
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||||||||| ||||||||||| |||||||||||| ||  |  |||||||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||    
T  18409116 aaatctgcacgagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacg 18409214  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    |||||||||||||| ||| ||||||| ||||||||| |  |||||||||||||||| ||  ||||||||| ||||| |||||||| || || ||||||||    
T  18409215 accagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaacc-agctcacg 18409313  T
Q  366 gcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    ||||| |  |||||||||||||| ||||| |||||  |||||||| ||||||||||||| ||||||||||||| | ||||||||||    
T  18409314 gcaccacaaaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaatctcaaca 18409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 230 - 449
Target Start/End: Complemental strand, 20357247 - 20357028
Alignment:
Q  230 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatc 329  Q
    |||||||| ||||||||||||| | |||||||   |||| |||||||||||||||||||||||||||||||||   ||| |||||||||||||||  |||    
T  20357247 caatcgtgccacgatttgcgtctgacccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatc 20357148  T
Q  330 gtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccaca 428  Q
    ||| |||||||| ||  |||| || | |||||||||||||||  || |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  20357147 gtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccaca 20357049  T
Q  429 aatttgaagacaatctcaaca 449  Q
    ||||||||| |||| ||||||    
T  20357048 aatttgaagccaatatcaaca 20357028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 168 - 450
Target Start/End: Original strand, 18413992 - 18414276
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| ||||||||||||  |  |  ||| |||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||    
T  18413992 aaatctgcacaagaacacttaaatactagtcttccaatgataaaattgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacg 18414090  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    |||||||||||||| ||| ||||||| ||||||||| |  ||||||| |||||||||||  ||||||||||||||| || ||||| || || ||||||||    
T  18414091 accagtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaacc-agctcacg 18414189  T
Q  366 gcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacag 450  Q
    ||||| |  ||||||| |||||| ||||| ||||| ||||||||| |||||||||||||||| |||||||||| | |||||||||||    
T  18414190 gcaccacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaacag 18414276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 149 - 406
Target Start/End: Complemental strand, 1533204 - 1532947
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| | ||||||||| ||||||||||| ||  |||||| ||||||||    |||||||| |||||||| ||  ||||||||||||||||    
T  1533204 ctcttccaagctctccctcaaatctgtacaagaacactatatatactagccttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttg 1533106  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
     ||  ||||||||| |  ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||| |||||    
T  1533105 tgtatgtcccaaggtataaccagtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcacc 1533006  T
Q  348 ctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgat 406  Q
    ||| ||  |||||||| ||||||||  |||| ||||||||| ||||| ||||| ||||||    
T  1533005 ctgcaa-actagctcatggcacctcaaaatcatgtcacgatgccaaattcgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 265 - 437
Target Start/End: Complemental strand, 21811923 - 21811751
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||  |||||| ||||||||||||||||| || | | ||||||    
T  21811923 gaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcac 21811824  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||| |||  |||||||||||||  |||||||||| ||||||| | |||||||||||||||||||||||||||    
T  21811823 ggcatctcagatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaag 21811751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 211 - 449
Target Start/End: Original strand, 12406619 - 12406857
Alignment:
Q  211 aatcgtgtcacgattttcccaa-tcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||| |||||||| ||||| ||||||||||||||||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||    
T  12406619 aatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcg 12406717  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc-acctccaatcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  |||||| |||||||| ||  | || || | ||||||||||| || |  |||||||||||||| ||||||||||| ||||||||    
T  12406718 tgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaac-tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 12406816  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  12406817 ctctgttcttccagaccacaaatttgaagccaatatcaaca 12406857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 211 - 449
Target Start/End: Original strand, 4873483 - 4873721
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||| |||||||| || | |||||||||||||||||  | | ||||||||| ||| |||||||||||  |||||||||||||||||||||   || |    
T  4873483 aatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaaggaa-gacaagtccttatcagtgatacttaacgagcaagtttctgaattg 4873581  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc-acctccaatcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  |||||| |||||||| ||  |||| || | || || ||||| || |  |||||||||||||| ||||||||||| ||||||||    
T  4873582 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 4873680  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  4873681 ctctgttcttccagaccacaaatttgaagccaatatcaaca 4873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 231 - 449
Target Start/End: Complemental strand, 48408619 - 48408398
Alignment:
Q  231 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaat 328  Q
    ||||||||||||||| |  ||| |||  ||||| ||||||||||||||||   || |||||||||||||||||    |||||||||||||||| ||  ||    
T  48408619 aatcgtgtcacgattggtacgtacgttacaaggtacgaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagat 48408520  T
Q  329 cgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccac 427  Q
    ||||||||||||| |||||||| || || ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||| |||||||| ||||||||    
T  48408519 cgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccac 48408421  T
Q  428 aaatttgaagac-aatctcaaca 449  Q
    |||||||||| | ||||||||||    
T  48408420 aaatttgaagccaaatctcaaca 48408398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 48408771 - 48408605
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  48408771 caaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttcccaagtttctctctcttcc 48408673  T
Q  156 aacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgatt 225  Q
       ||||||   |||||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||    
T  48408672 gctctcttca--aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt 48408605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 31109309 - 31109070
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||| |||||||| || | ||||||||||||| |||  | | ||||||| | ||| |||||||||||   ||||||||| ||||||||||   ||||    
T  31109309 aatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaaggca-gacaagtccttatcagttatacttaaccagcaagtttctgaatcg 31109211  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac-ggcacctccaatcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  |||||| |||||||| ||  |||| || | ||||| || ||||| |  ||||||| |||||| ||||||||||| ||||||||    
T  31109210 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttacaggcacttgaaatcgtgccacgatgccaaaatcgtgtcacgattt 31109111  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||||| ||||||||||||||| |||| ||||||    
T  31109110 ctctgttcttccaaaccacaaatttgaagccaatttcaaca 31109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 265 - 437
Target Start/End: Complemental strand, 24024003 - 24023831
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| ||  ||||||| |    
T  24024003 gaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa-actagctctc 24023905  T
Q  365 -ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
     | ||| |  ||||||| |||||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  24023904 tgccacttgaaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24023831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 24265861 - 24265684
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | ||||||||    
T  24265861 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 24265762  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  | |  |||||||||||| | |||||||||| ||||||| | ||||||| ||| ||||| ||||||||| ||||    
T  24265761 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 24265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 137 - 437
Target Start/End: Original strand, 2479647 - 2479947
Alignment:
Q  137 ccaagtctctctctcttccaacctcttcttcaaa-tctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcg 235  Q
    |||||| ||||||||||| || ||||||| |||| ||||||||||||||||||  |||||||||||  ||  |  ||||||| |||| |||||| ||||     
T  2479647 ccaagtttctctctcttc-aagctcttctccaaaatctgcacaagaacacttatatactagtcttcaactgataaaatcgtgccacg-ttttccaaatca 2479744  T
Q  236 tgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgt 333  Q
    || || ||||  ||||| || ||||||| |||||||  |||||||  | | ||||||| | ||||||| |  ||||||| |||||||| || |||||||     
T  2479745 tgccatgattgatgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtga 2479843  T
Q  334 cacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatt 432  Q
    ||||||||  ||||||| || || |||||||||||     || |||||||||||| ||||||||||| ||| ||||| |||||||| || ||||||||||    
T  2479844 cacgatttgacaccctgcaaacc-agctcacggcattagaaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatt 2479942  T
Q  433 tgaag 437  Q
    |||||    
T  2479943 tgaag 2479947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 211 - 449
Target Start/End: Original strand, 12397267 - 12397492
Alignment:
Q  211 aatcgtgtcacgattttcccaa-tcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||| |||||||| ||||| ||||||||||||||||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||    
T  12397267 aatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcg 12397365  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc-acctccaatcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  ||| || |             ||| || | ||||||||||| || |  |||||||||||||| ||||||||||| | ||||||    
T  12397366 tgtcacgatttcccaagatcatggc-------------ctgcaaac-tagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgattt 12397451  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  12397452 ctctgttcttccagaccacaaatttgaagccaatatcaaca 12397492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 24261005 - 24260828
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  ||||||||||||||||||   | ||   | | ||||||    
T  24261005 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagattacttggctcac 24260906  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  | |  |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  24260905 tgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 24260828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 285 - 437
Target Start/End: Original strand, 47264102 - 47264254
Alignment:
Q  285 acttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtca 383  Q
    ||||||| ||||||||| |  |||||||||||||||| |||||| ||| ||||||||  ||||||  || || |||||||| ||   | || ||||||||    
T  47264102 acttaaccagcaagtttgaaaatcgtgtcacgatttcacacaattgtgccacgatttgacaccctacaaacc-agctcacgacattacaaaatcgtgtca 47264200  T
Q  384 cgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||| ||||||||||| ||||||||| || |||||||| |||||||||||||||    
T  47264201 cgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaag 47264254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 18390506 - 18390562
Alignment:
Q  393 aatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 48491526 - 48491416
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttccaacctcttcttcaaa-tctgc 175  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| || |||||||||   ||||| ||||||||||| ||||||||||||||| |||||    
T  48491526 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttatcaagtttctctctcttc-aacctcttcttcaaaatctgc 48491430  T
Q  176 acaagaacacttaa 189  Q
    ||||||||||||||    
T  48491429 acaagaacacttaa 48491416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 48489399 - 48489268
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| || | ||||||| |||| || ||||||||| ||||||| ||||| |||||     
T  48489399 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccatcaaccctaaagttacctcctttgatttcccaagtttctctatcttc- 48489303  T
Q  156 aacctcttcttcaaa-tctgcacaagaacacttaa 189  Q
    || |||||||||||| |||||||||||||||||||    
T  48489302 aatctcttcttcaaaatctgcacaagaacacttaa 48489268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 16880476 - 16880653
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  || ||||||| ||||||||||   |||||||||| ||||||||  |||||| |||||||||||  || | || |   ||||||    
T  16880476 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcac 16880575  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  | |  |||||||||||||  |||||||||| ||||||| | ||| ||||||| ||||| ||||||||| ||||    
T  16880576 tgcctccctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16880653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 16885331 - 16885508
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  || ||||||| ||||||||||   |||||||||| ||||||||  |||||| |||||||||||  || | || |   ||||||    
T  16885331 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcac 16885430  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  | |  |||||||||||||  |||||||||| ||||||| | ||| ||||||| ||||| ||||||||| ||||    
T  16885431 tgcctccctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaat 16885508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 1113604 - 1113495
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttccaacctcttcttc-aaatctgc 175  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||| ||||||| |||||||||| ||||||||||||| ||||||||    
T  1113604 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacttcctttgatttcccaagtttctctctctt-caacctcttcttcaaaatctgc 1113508  T
Q  176 acaagaacactta 188  Q
    |||  ||||||||    
T  1113507 acagaaacactta 1113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 374 - 437
Target Start/End: Complemental strand, 44847695 - 44847632
Alignment:
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||  | |||||||||||||||    
T  44847695 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaag 44847632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 24514960 - 24515056
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||||    
T  24514960 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 24515056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 29991023 - 29990927
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||| | ||||||||| ||||||| |||||||||||    
T  29991023 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgtctcctttgatttcccaagtttctctctcttc 29990927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 35853883 - 35853754
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||| ||||||||| |||||||||||| ||||||  ||||||||| || |||| |||||||||| |    
T  35853883 caaggtgtttacaatgtttcccaacccaagaga-actcaaatcaaaga-ccctaaaccctaaagttgctacctttgatttcctaagtttctctctctt-c 35853787  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || ||||||||| ||||||||| |||||||||||    
T  35853786 aagctcttcttcaaaatctgca-aagaacactta 35853754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 1532945 - 1532897
Alignment:
Q  389 ccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  1532945 ccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1532897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 442
Target Start/End: Original strand, 21983791 - 21983859
Alignment:
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    ||||||||||||||    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  21983791 aatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21983859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 4178743 - 4178647
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| | ||||| |||||||||||    
T  4178743 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttctcaagtttctctctcttc 4178647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 18390479 - 18390520
Alignment:
Q  347 cctgaaaccctagctcacggcacctccaatcgtgtcacgatt 388  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  18390479 cctgcaaccctagctcacggcacctccaatcgtggcacgatt 18390520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 30024949 - 30025028
Alignment:
Q  74 ttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    ||||||||| |||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  30024949 ttttcaacctaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 30025028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 47676336 - 47676465
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| ||||  | ||||||||| ||||||| |||||||||| |    
T  47676336 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttatctcctttgatttcccaagtttctctctctt-c 47676432  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || ||| ||||| ||||||||| |||||||||||    
T  47676433 aagctcctcttcaaaatctgca-aagaacactta 47676465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 374 - 437
Target Start/End: Original strand, 21989455 - 21989518
Alignment:
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||||||||||||||    ||||| || ||||||||| ||||||||||| |||||||||||||||    
T  21989455 aatcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaag 21989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 79955 - 80005
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| | ||||||||||||| ||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaat 80005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 340
Target Start/End: Complemental strand, 4178495 - 4178461
Alignment:
Q  306 atcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    ||||||||||||||||||| |||||||||||||||    
T  4178495 atcgtgtcacgatttcccaaaatcgtgtcacgatt 4178461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 43864212 - 43864116
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  43864212 caaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 43864116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 14070054 - 14070129
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||||| |||||||||||||| |||| | ||||| |||| || ||||||||| ||||||| |||||||||||    
T  14070054 caacccaagaga-actctaatcaaaga-ccctcagccctaaagttacctcctttgatttcccaagtttctctctcttc 14070129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 14380082 - 14380157
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||||| |||||||||||||| |||| | ||||| |||| || ||||||||| ||||||| |||||||||||    
T  14380082 caacccaagaga-actctaatcaaaga-ccctcagccctaaagttacctcctttgatttcccaagtttctctctcttc 14380157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 25637412 - 25637013
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  25637412 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagatacccctttgatttcccaagtctctctc 25637313  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25637312 tcttccaacctcctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 25637213  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca-ccc 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||    
T  25637212 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacga-tttgcacccc 25637114  T
Q  349 tgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    || ||||||||||| | |||||||  |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  25637113 tgcaaccctagctctc-gcacctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagacaatctcaa 25637015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 3617439 - 3617034
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  3617439 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtc 3617340  T
Q  144 tctctctcttccaacctct--tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
    |||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3617339 tctctct--tccaacctctactcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcac 3617242  T
Q  242 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||| ||    
T  3617241 gatttgcgtccgtcccaaggaacgaccagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacga-tt 3617143  T
Q  342 tgca-ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagaca 440  Q
    |||| ||||| ||||||||||||||||| |   |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3617142 tgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 3617043  T
Q  441 atctcaaca 449  Q
    |||||||||    
T  3617042 atctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 6716490 - 6716085
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  6716490 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagt 6716391  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||| ||  ||||||||||||||||||| ||||||||||||    
T  6716390 ctctctctcttccaaccctttcttcaaatctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgattttccaaatcgtgtcacg 6716292  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    ||  |||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6716291 atccgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgatttt 6716192  T
Q  343 gcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    |||||||| || |||||||||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  6716191 gcaccctgcaa-cctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaa 6716093  T
Q  442 tctcaaca 449  Q
    ||||||||    
T  6716092 tctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 54635115 - 54634710
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  54635115 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 54635016  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    ||||||||||||||||  | ||||||||||||||||||||||||| | |||||| |||||||| || ||||||||||||||||||||||||||||||| |    
T  54635015 ctctctctcttccaactccctcttcaaatctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcatg 54634917  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    |||||||| |  |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  54634916 atttgcgtaccacccaagaaaagaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgatttt 54634817  T
Q  343 gcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    |||||||| || | |||||||||||||| |  ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54634816 gcaccctgcaa-cttagctcacggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 54634718  T
Q  442 tctcaaca 449  Q
    ||||||||    
T  54634717 tctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 50 - 449
Target Start/End: Original strand, 4600928 - 4601328
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||    
T  4600928 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagctttccctttgatttcccaagtctctctc 4601027  T
Q  150 tcttccaacctcttc--ttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    |  ||||||   |||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4601028 t--tccaactctttcctttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttg 4601125  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-caatcgtgtcacgattttgca- 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||| ||||| ||||||     
T  4601126 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacga-tttgcac 4601224  T
Q  346 ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctc 445  Q
    ||||| ||||||||||||||||| |   ||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  4601225 ccctgcaaccctagctcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctc 4601324  T
Q  446 aaca 449  Q
    ||||    
T  4601325 aaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 50 - 450
Target Start/End: Complemental strand, 10056203 - 10055804
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  10056203 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccctttgatttcccaagtctctctc 10056104  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    | ||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10056103 t-ttcaaccctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcg 10056006  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| ||    
T  10056005 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcaccc 10055907  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10055906 ctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaa 10055807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 10067313 - 10066915
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  10067313 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccctttgatttcccaagtctctctc 10067214  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    | ||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10067213 t-ttcaaccctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcg 10067116  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| ||    
T  10067115 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcaccc 10067017  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10067016 ctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaa 10066917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 50 - 449
Target Start/End: Original strand, 4598707 - 4599107
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||    
T  4598707 tctctctacagggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagctttccctttgatttcccaagtctctctc 4598806  T
Q  150 tcttccaac-ctcttctt-caaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    |  |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  4598807 t--tccaactctctcctttcaaatctgcacaagaacacttaagtactagtcttcctctgtttcaatcgtgtcacgattttcccaatcgtgtcacgatttg 4598904  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-caatcgtgtcacgattttgca- 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||| ||||| ||||||     
T  4598905 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacga-tttgcac 4599003  T
Q  346 ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctc 445  Q
    ||||| ||||||||||||||||| |   ||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  4599004 ccctgcaaccctagctcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctc 4599103  T
Q  446 aaca 449  Q
    ||||    
T  4599104 aaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 10211379 - 10210978
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||    
T  10211379 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctttccctttgatttcccaagtctctctc 10211280  T
Q  150 tcttccaacctctt---cttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgattt 246  Q
    |  |||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10211279 t--tccaacctcttttacttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgattt 10211182  T
Q  247 gcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||| ||||||| ||||| ||||||    
T  10211181 gcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacga-tttgca 10211083  T
Q  346 -ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatct 444  Q
     ||||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  10211082 cccctgcaaccctaactcacggcatcctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaatct 10210983  T
Q  445 caaca 449  Q
    |||||    
T  10210982 caaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 10058425 - 10058027
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  10058425 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccctttgatttcccaagtctctctc 10058326  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    | ||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10058325 t-ttcaaccctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcg 10058228  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| ||    
T  10058227 tacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcaccc 10058129  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10058128 ctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaa 10058029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 10060647 - 10060249
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  10060647 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccctttgatttcccaagtctctctc 10060548  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    | ||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10060547 t-ttcaaccctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcg 10060450  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| ||    
T  10060449 tacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcaccc 10060351  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10060350 ctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaa 10060251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 10062869 - 10062471
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  10062869 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccctttgatttcccaagtctctctc 10062770  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    | ||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10062769 t-ttcaaccctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcg 10062672  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| ||    
T  10062671 tacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcaccc 10062573  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10062572 ctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaa 10062473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 10065091 - 10064693
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  10065091 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccctttgatttcccaagtctctctc 10064992  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    | ||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10064991 t-ttcaaccctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcg 10064894  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| ||    
T  10064893 tacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcaccc 10064795  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  10064794 ctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaa 10064695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 6718674 - 6718288
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  6718674 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagt 6718575  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||| ||  ||||||||||||||||| | ||||||||||||    
T  6718574 ctctctctcttccaaccctttcttcaaatctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgatttttcaaatcgtgtcacg 6718476  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    ||  |||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6718475 atccgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgatttt 6718376  T
Q  343 gcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| || ||||||||||||||||                  || |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6718375 gcaccctgcaa-cctagctcacggcacc------------------ccgaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 6718295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 45282973 - 45282585
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45282973 tgattctctctttgcaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattccccaagt 45282874  T
Q  143 ctctctctct--tccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtc 239  Q
    ||||||||||  |||||| ||| ||||||||||||||||||||||||| | |||||| |||||||| ||  |||||||||||||||||||||||||||||    
T  45282873 ctctctctctcttccaac-tctctcttcaaatctgcacaagaacacttta-tactagccttcctctgttgaaatcgtgtcacgattttcccaatcgtgtc 45282776  T
Q  240 acgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgat 339  Q
    ||||| ||||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||     
T  45282775 acgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaa 45282676  T
Q  340 tttgcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac 439  Q
    ||||||||||| || ||||||||||||||||                  || |||||||| |||||||||||||||||||||||||||||||||||||||    
T  45282675 tttgcaccctgcaa-cctagctcacggcacc------------------ccgaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac 45282595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 10209159 - 10208778
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||    
T  10209159 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctttccctttgatttcccaagtctctctc 10209060  T
Q  150 tcttccaacctctt---cttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgattt 246  Q
    |  |||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||                    |||||||||||||    
T  10209059 t--tccaacctcttttacttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaat--------------------cgtgtcacgattt 10208982  T
Q  247 gcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca 345  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||| ||||||| ||||||| ||||| ||||||    
T  10208981 gcgtccgtcccaaggaacgaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacga-tttgca 10208883  T
Q  346 -ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatct 444  Q
     ||||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||    
T  10208882 cccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagacaatct 10208783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 58 - 449
Target Start/End: Original strand, 23198137 - 23198530
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||  |||||| ||||||||||||    
T  23198137 caaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgattttccaagtttctctctcttcc 23198235  T
Q  156 aac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtcc 252  Q
    ||| ||||||   |||||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| || ||||||||||||||| |  ||| |    
T  23198236 aactctcttca--aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt-ccaaatcgtgtcacgattggtacgtac 23198332  T
Q  253 gtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaa 352  Q
    ||| ||||| ||||||||||||||||  ||| |||||||||||||||||    |||||||||||||| | |  |||||||||||||||| |||||||| |    
T  23198333 gtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgca 23198432  T
Q  353 accctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    | || ||||||||||| | | || ||||||||||||  |||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  23198433 aacc-agctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 58 - 449
Target Start/End: Original strand, 23200336 - 23200729
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  23200336 caaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttcccaagtttctctctcttcc 23200434  T
Q  156 aac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtcc 252  Q
    ||| ||||||   |||||||||||| ||||||||| ||| |||||||| ||  |  |||||||||||||||| || ||||||||||||||| |  |||      
T  23200435 aactctcttca--aaatctgcacaaaaacacttaaataccagtcttccactgataaaatcgtgtcacgattt-ccaaatcgtgtcacgattggtacgtaa 23200531  T
Q  253 gtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaa 352  Q
    ||| ||||| ||||||||||||||||  ||| |||||||||||||||||    |||||||||||||| | |  |||||||||||||||| |||||||| |    
T  23200532 gtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgca 23200631  T
Q  353 accctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    | || ||||||| ||| | |  |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  23200632 aacc-agctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23200729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 175 - 450
Target Start/End: Original strand, 8477729 - 8478003
Alignment:
Q  175 cacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtcct 274  Q
    ||||||||||||||| |||||| ||||||||    ||||||||||||||||| ||  ||||||||||||||||||| |  ||||||| | ||||||||||    
T  8477729 cacaagaacacttaaatactagccttcctctgaagcaatcgtgtcacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtcct 8477827  T
Q  275 tatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-c 373  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||  |||||| |||||||| ||| || | ||  |||||||||||||||||      
T  8477828 tatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaa-actagctcacggcacctcga 8477926  T
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 450  Q
    |||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||| |||||||    
T  8477927 aatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaatgtcaacag 8478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 149 - 449
Target Start/End: Complemental strand, 40372556 - 40372256
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| ||||  | |||||||||||||||||||  ||  |||||||||||||||     |||||||||||||||| ||  |||||| |||||||||    
T  40372556 ctcttccaagctctcttacaaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt-ccagatcgtggcacgatttg 40372458  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||||||| || ||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |    
T  40372457 cgtccgttcccaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtc 40372358  T
Q  348 ctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    ||| ||  |||||||||||||||||  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||    
T  40372357 ctgcaa-actagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 40372259  T
Q  447 aca 449  Q
    |||    
T  40372258 aca 40372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 44 - 450
Target Start/End: Complemental strand, 801081 - 800684
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaag 141  Q
    ||||| ||||| | ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| |  ||||||||| ||||||    
T  801081 tgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagtttcttcctttgatttcccaag 800983  T
Q  142 tctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
    | ||||||||            |||||||| ||||||||||||||||| || ||| | ||  ||  |  |||||||||||||||| ||    ||||||||    
T  800982 tttctctctc------------cttcaaatatgcacaagaacacttaaatattagccctctactgataaaatcgtgtcacgattt-ccaggccgtgtcac 800896  T
Q  242 gatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgat 339  Q
    ||||  ||||| ||||||||| |||||||| ||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||||||||||    
T  800895 gattggtgcgttcgtcccaagaaacgaccattccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgat 800796  T
Q  340 tttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaaga 438  Q
    || |||||| | || || ||||||||||| | | || |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  800795 ttggcaccccgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaaga 800697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 167 - 449
Target Start/End: Original strand, 7167600 - 7167882
Alignment:
Q  167 caaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||  ||  |||||||||||||||     ||||||| || |||||||  ||||||||||||||||||||| | ||||||| | |    
T  7167600 caaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccatgattttca-aatcgtgtcacgatttgcgtctgacccaaggtatg 7167698  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    ||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| ||  ||||||||||    
T  7167699 accagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa-actagctcacg 7167797  T
Q  366 gcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||| |  ||| |||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||| ||||||    
T  7167798 gcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatatcaaca 7167882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 22172899 - 22172662
Alignment:
Q  211 aatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 310  Q
    ||||||| |||||||| || ||||||||||||||||||  | |  ||||||   |||||||||||||||  ||| |||||||||||||||||   |||||    
T  22172899 aatcgtgccacgatttcccaaatcgtgtcacgatttgcaacggaaccaaggtt-gaccagtccttatcagagatccttaacgagcaagtttctgaatcgt 22172801  T
Q  311 gtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttc 409  Q
    ||||||||||||||  |||||| |||||||| ||  |||| || | | |||||||||||||| || |||||||||||| ||||||||||| |||||||||    
T  22172800 gtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 22172702  T
Q  410 cctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
     ||||||||||||||||||||||||||| |||| ||||||    
T  22172701 tctgttcttccagaccacaaatttgaagccaatatcaaca 22172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 149 - 449
Target Start/End: Complemental strand, 28503620 - 28503319
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttccca-atcgtgtcacgattt 246  Q
    ||||||||| |||| |||||||   ||||||||||||  ||  |||||||||||||||    |||||||| |||||||| || | |||||||||||||||    
T  28503620 ctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcacgattt 28503521  T
Q  247 gcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcac 346  Q
    ||||| | |||||||   ||| ||||||||||| ||||||||||||||||||||||   || ||||||||||||||||  |||||| |||||||| ||      
T  28503520 gcgtctgacccaaggtt-gacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgt 28503422  T
Q  347 cctgaaaccctagctcacggcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctc 445  Q
    || | ||  |||||||||||| || |  |||||||||||||| ||||||||||| ||||||||| |||||||||||| |||||||||||||| |||| ||    
T  28503421 ccagcaa-actagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatc 28503323  T
Q  446 aaca 449  Q
    ||||    
T  28503322 aaca 28503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 166 - 433
Target Start/End: Complemental strand, 27352364 - 27352097
Alignment:
Q  166 tcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaac 264  Q
    ||||||||||||||||||||  ||  || ||| ||||||||    |||||||| |||||||| || ||||||||||||||||||||||||||||||| |     
T  27352364 tcaaatctgcacaagaacacaatatatattagccttcctctgaagcaatcgtgccacgattt-ccaaatcgtgtcacgatttgcgtccgtcccaaggtat 27352266  T
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||| ||||||||||||||||   |||||||||||||||||||  |||||| |||||||| |    ||| ||  | |||||||    
T  27352265 gaccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaa-acaagctcac 27352167  T
Q  365 ggcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaattt 433  Q
    |||||| |  |||||||||||||| ||||||||||| ||||||||  ||||||||| |||||||||||||    
T  27352166 ggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaattt 27352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 213 - 449
Target Start/End: Original strand, 1306366 - 1306604
Alignment:
Q  213 tcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 310  Q
    |||||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| |  |||||    
T  1306366 tcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgt 1306464  T
Q  311 gtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttc 409  Q
    ||||||||||||||  ||||||||||||||| |||||||| || || |||||||| |||| |  |||||||||||||| ||||| || || |||||||||    
T  1306465 gtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcacgatttc 1306563  T
Q  410 cctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
     |||||||||||||||| |||||||||| | ||||||||||    
T  1306564 tctgttcttccagaccataaatttgaagccaaatctcaaca 1306604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 92 - 320
Target Start/End: Original strand, 7782375 - 7782603
Alignment:
Q  92 ctctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttccaacctcttcttcaaatctgcacaagaacacttaag 190  Q
    ||||||||||||| | ||||| ||||||||| | |||||||||| ||||||| ||||||||||||||| | | ||||||||||||||||||||||||||     
T  7782375 ctctaatcaaaga-ctctaaaacctagagttactccctttgatttcccaagtttctctctcttccaac-tgtccttcaaatctgcacaagaacacttaaa 7782472  T
Q  191 tactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatactt 288  Q
    |||||| | ||| ||  |  |||||||||||||||| ||  |||||||||||||| |  ||| |||||||||| ||||||||||||||||| ||| ||||    
T  7782473 tactagccctccactgataaaatcgtgtcacgattt-ccagatcgtgtcacgattggtacgttcgtcccaaggcacgaccagtccttatcatggaaactt 7782571  T
Q  289 aacgagcaagtttcacgatcgtgtcacgattt 320  Q
    |||||||||||||    |||||||||||||||    
T  7782572 aacgagcaagtttgcaaatcgtgtcacgattt 7782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 191 - 449
Target Start/End: Complemental strand, 28501410 - 28501152
Alignment:
Q  191 tactagtcttcctctattccaatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatactta 289  Q
    |||||||||||||||    |||||||| |||||||| || | ||||||||| |||||||||| | |||||||   ||| ||||||||||| |||||||||    
T  28501410 tactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcatgatttgcgtctgacccaaggtt-gacaagtccttatcagggatactta 28501312  T
Q  290 acgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgatt 388  Q
    |||||||||||||   ||||||||||||||| |||  |||||| |||||||| |   |||| || | ||||||||||| |||  || ||||||||||||     
T  28501311 acgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatg 28501213  T
Q  389 ccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||||||| |||| ||||||    
T  28501212 ccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 265 - 437
Target Start/End: Complemental strand, 2672603 - 2672431
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | |||| |    
T  2672603 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctccc 2672504  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||| |||| |||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||||    
T  2672503 ggcatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaag 2672431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 231 - 399
Target Start/End: Complemental strand, 2671283 - 2671115
Alignment:
Q  231 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcg 330  Q
    |||||||||||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  ||||    
T  2671283 aatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcg 2671184  T
Q  331 tgtcacgattttgcaccctgaaaccctagctcacggcacc-tccaatcgtgtcacgattccaaaatcgtg 399  Q
    || |||||||| ||| |||| ||  ||||||||||||||| |  |||| ||||||||| |||||||||||    
T  2671183 tgccacgatttggcatcctgcaa-actagctcacggcaccttgaaatcatgtcacgatgccaaaatcgtg 2671115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 149 - 371
Target Start/End: Complemental strand, 8738823 - 8738602
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| |||||||   ||||||||||||  ||  |||||| ||||||||    |||||||| |||||||| ||  ||| ||||||||||||    
T  8738823 ctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagacttcctctgaagcaatcgtgccacgattt-ccagatcatgtcacgatttg 8738725  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |    
T  8738724 cgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtc 8738625  T
Q  348 ctgaaaccctagctcacggcacct 371  Q
    ||| ||  ||||||||||||||||    
T  8738624 ctgcaa-actagctcacggcacct 8738602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 149 - 371
Target Start/End: Complemental strand, 9091061 - 9090840
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| |||||||   ||||||||||||  ||  |||||| ||||||||    |||||||| |||||||| ||  ||| ||||||||||||    
T  9091061 ctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagacttcctctgaagcaatcgtgccacgattt-ccagatcatgtcacgatttg 9090963  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |    
T  9090962 cgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtc 9090863  T
Q  348 ctgaaaccctagctcacggcacct 371  Q
    ||| ||  ||||||||||||||||    
T  9090862 ctgcaa-actagctcacggcacct 9090840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 18656844 - 18657029
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  ||||||||||||||| ||  |||| || | |   ||||    
T  18656844 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcac 18656943  T
Q  365 ggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||| | || |||||||||||| ||||||||||| || |||||| |||||||| |||||||||||||||||| |||| ||||||    
T  18656944 ggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 18657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 265 - 437
Target Start/End: Complemental strand, 2676759 - 2676587
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  ||| |||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | |||| |    
T  2676759 gaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctccc 2676660  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    | || |||| |||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||||    
T  2676659 gacatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaag 2676587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 168 - 449
Target Start/End: Complemental strand, 33386419 - 33386137
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| ||| |||||||  ||  |  ||||||| ||| |||| || |||||||||||||||  | ||| || ||||||  |||    
T  33386419 aaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacaattt-ccaaatcgtgtcacgattgatacgtacgacccaagatacg 33386321  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    ||||  |||||||  | | ||||||| ||||||||| |  |||||||||||||| | || |||||||||||||||| |||||||| || || ||||||||    
T  33386320 accaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaacc-agctcacg 33386223  T
Q  366 gcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    ||| | | || |||||||||||| ||||| ||||| ||||||||| |||||||| | |||||||||||||||| | ||||||||||    
T  33386222 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaaatctcaaca 33386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 78 - 449
Target Start/End: Complemental strand, 37408406 - 37408036
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttccaacctcttcttcaaa-tctgc 175  Q
    |||||||||||| |||||||||||||| || ||||||||| ||||||| ||||||||| ||||||| ||||||||||| || |||  ||||||| ||| |    
T  37408406 caacccaagaga-actctaatcaaaga-ccataaaccctaaagttgcctcctttgatttcccaagtttctctctcttc-aagctcaccttcaaaatcttc 37408310  T
Q  176 acaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtcc 273  Q
    |||||||||||||  ||| |||||||  |   |  |||| ||| ||||||| || ||||||| |||||||  | ||| || ||||||| |||||||  ||    
T  37408309 acaagaacacttatataccagtcttcagcagataaaatcttgttacgattt-ccaaatcgtgccacgattgatacgtacgacccaaggtacgaccaa-cc 37408212  T
Q  274 ttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctcc 373  Q
    |||||  | | ||||||| | ||||||| |  ||||||||||||||| | ||||||||| ||||||||  ||||||| || || ||||||||||||  |     
T  37408211 ttatcctgaaaacttaaccaacaagtttgaaaatcgtgtcacgatttac-acaatcgtgccacgatttgacaccctgcaaacc-agctcacggcactaca 37408114  T
Q  374 aa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    || |||||||||||| ||| ||||||| |||||||||  |||||||||| ||||||||||||||| | ||||||||||    
T  37408113 aaatcgtgtcacgatgccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaatctcaaca 37408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 231 - 449
Target Start/End: Complemental strand, 26928301 - 26928080
Alignment:
Q  231 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaat 328  Q
    |||||||||||||||  | |||  ||| ||||| |||||| |||||||||  | | ||||||||||||||||| |  |||||||||||||| | ||  ||    
T  26928301 aatcgtgtcacgattgatacgtaagtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagat 26928202  T
Q  329 cgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccac 427  Q
     |||||||||||| |||||||| || || |||||||||||   | || |||||||||||| ||||| ||||| ||||||||| |||||||||||||||||    
T  26928201 tgtgtcacgatttggcaccctgcaaacc-agctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccac 26928103  T
Q  428 aaatttgaagac-aatctcaaca 449  Q
    |||||||||| | ||||||||||    
T  26928102 aaatttgaagccaaatctcaaca 26928080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 172 - 449
Target Start/End: Original strand, 27453303 - 27453581
Alignment:
Q  172 ctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgacca 269  Q
    ||||||||||||||||||  ||||||||||  ||  |  ||||||| |||||||| || |||||||||||||||  | ||| |||| ||||| |||||||    
T  27453303 ctgcacaagaacacttaaaaactagtcttcaactgataaaatcgtgccacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacca 27453401  T
Q  270 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcac 369  Q
      |||||||  | | ||||||| ||||||||| |  |||||||||||||| | ||||||| ||||||||||| |||||||  || || |||||||||||     
T  27453402 a-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaacc-agctcacggcat 27453499  T
Q  370 ctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    | | || |||||||||||| ||||| ||||| ||| ||||| ||| |||| |||||||||||||||||| | ||||||||||    
T  27453500 cacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaaatctcaaca 27453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 168 - 388
Target Start/End: Original strand, 32143664 - 32143885
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| ||| |||||||  ||  |  |||||||||||||||| || |||||||||||||||  | ||| |||| ||||| |||    
T  32143664 aaatctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaggtacg 32143762  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    ||| |||||||||  | | ||||||||||||||||| |  |||||||||||||| | ||  ||||||||||||||| |||||||| ||  ||||||||||    
T  32143763 acctgtccttatcttgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaa-actagctcacg 32143861  T
Q  366 gcacctc-caatcgtgtcacgatt 388  Q
    ||| | |  |||||||||||||||    
T  32143862 gcatcacaaaatcgtgtcacgatt 32143885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 8512643 - 8512820
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | ||||||||    
T  8512643 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 8512742  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  | |  |||||||||||| | |||||||||| ||||||| | ||||||| ||| ||||| ||||||||| ||||    
T  8512743 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 8512820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 265 - 444
Target Start/End: Original strand, 32475887 - 32476066
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  ||||||||||||||||||   | || | | | ||||||    
T  32475887 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcac 32475986  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatct 444  Q
     ||  | |  |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||||    
T  32475987 tgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatct 32476066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 265 - 444
Target Start/End: Original strand, 32480745 - 32480924
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  ||||||||||||||||||   | || | | | ||||||    
T  32480745 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcac 32480844  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatct 444  Q
     ||  | |  |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||||    
T  32480845 tgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatct 32480924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 211 - 449
Target Start/End: Original strand, 37726060 - 37726299
Alignment:
Q  211 aatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 308  Q
    ||||||| |||| |||||| |||||||||||||||  | ||| || ||||| | |||||||  |||||||  | | ||||||| | ||||||| |  |||    
T  37726060 aatcgtgccacg-ttttccaaatcgtgtcacgattgatacgtacgacccaatgtacgaccaa-ccttatcctgaaaacttaaccaacaagtttgaaaatc 37726157  T
Q  309 gtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatt 407  Q
    ||||||||||| | || ||||||||||||||||  ||||||| || || ||||||||||| | | || ||||||||||||  |||| ||||| |||||||    
T  37726158 gtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgatatcaaattcgtgtcacgatt 37726256  T
Q  408 tccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    || ||||||||||| ||||||||||||||| | ||||||||||    
T  37726257 tctctgttcttccaaaccacaaatttgaagccaaatctcaaca 37726299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 265 - 451
Target Start/End: Original strand, 8517523 - 8517709
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | ||||||||    
T  8517523 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 8517622  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaga 451  Q
     ||  | |  |||||||||||| | |||||||||| ||||||| | ||||||| | | ||||| ||||||||| ||||  |||||||    
T  8517623 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcctaaaccactaatttgaagtcaattccaacaga 8517709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 326 - 449
Target Start/End: Original strand, 7782588 - 7782712
Alignment:
Q  326 aatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagac 424  Q
    |||||||||||||||| |||||||| || || ||||||| ||| | |  |||||||||||||| ||||| ||||| ||||||||||||||||||| ||||    
T  7782588 aatcgtgtcacgatttggcaccctgcaaacc-agctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagac 7782686  T
Q  425 cacaaatttgaagac-aatctcaaca 449  Q
    ||||||||||||| | ||||||||||    
T  7782687 cacaaatttgaagccaaatctcaaca 7782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 24968520 - 24968697
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  || ||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | ||||||    
T  24968520 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 24968619  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  | || |||||||||||||| | |||||||| ||||||| |  |||||||||| ||||| ||||||||| ||||    
T  24968620 tgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcctttgttcttccaaaccactaatttgaagtcaat 24968697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 5260523 - 5260619
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  5260523 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttc 5260619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 269
Target Start/End: Complemental strand, 45095133 - 45094920
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgccccttt-gattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||| |||| |||| ||||||| |||||||||| |    
T  45095133 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcttttgatttcccaagtttctctctctt-c 45095037  T
Q  156 aacctcttcttc-aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgatttt-cccaatcgtgtcacgatt--tgcgtc 251  Q
    || ||| ||||| ||||||||| |||||||||||  ||  | |||||  |  |   |||||||||||| |||| ||||||||||||||||||  |||||     
T  45095036 aagctcatcttcaaaatctgca-aagaacacttatatagcaatcttcagcgttcgaaatcgtgtcacgtttttccccaatcgtgtcacgattgatgcgta 45094938  T
Q  252 cgtcccaaggaacgacca 269  Q
    ||| |||||| |||||||    
T  45094937 cgttccaaggtacgacca 45094920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 9636347 - 9636427
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttccaac 158  Q
    |||||||||||| |||||||||||||| |||||||||||| |||| |  ||||||||| ||||||| |||||||||||||||    
T  9636347 caacccaagagagactctaatcaaaga-ccctaaaccctaaagtttcttcctttgatttcccaagtttctctctcttccaac 9636427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 285 - 388
Target Start/End: Complemental strand, 27986103 - 27986000
Alignment:
Q  285 acttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtca 383  Q
    ||||||| ||||||||| |  |||||||||||||| | ||||||||||||||||||| |||||||| || || ||||||||||| | |  ||||||||||    
T  27986103 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtca 27986005  T
Q  384 cgatt 388  Q
    |||||    
T  27986004 cgatt 27986000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 8738599 - 8738542
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8738599 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 9090837 - 9090780
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9090837 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9090780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 29813010 - 29812920
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttccaacctcttcttcaaa 170  Q
    |||||||||||| ||| |||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||| ||||||||||||||||    
T  29813010 caacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt-caacctcttcttcaaa 29812920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 40734132 - 40734084
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagaca 440  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagaca 40734084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 27974493 - 27974446
Alignment:
Q  390 caaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27974446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 36029658 - 36029709
Alignment:
Q  391 aaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  36029658 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 36029709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 5236656 - 5236787
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || |||| |||| ||||||| |||||||||| |    
T  5236656 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctccttcgatttcccaagtttctctctctt-c 5236752  T
Q  156 aacctcttcttc-aaatctgcacaagaacacttaa 189  Q
    || | |  |||| ||||||||||||||||||||||    
T  5236753 aagccccacttcaaaatctgcacaagaacacttaa 5236787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 5258344 - 5258440
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||| | |||||||||| | ||||| |||||||||||    
T  5258344 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagtttctccctttgatttctcaagtttctctctcttc 5258440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 16264896 - 16264946
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaat 16264946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 21711768 - 21711818
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 30709316 - 30709266
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 30709266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 27027273 - 27027318
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 340
Target Start/End: Complemental strand, 3393327 - 3393293
Alignment:
Q  306 atcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    ||||||||||||||||||| |||||||||||||||    
T  3393327 atcgtgtcacgatttcccaaaatcgtgtcacgatt 3393293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 5258592 - 5258626
Alignment:
Q  306 atcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    ||||||||||||||||||| |||||||||||||||    
T  5258592 atcgtgtcacgatttcccaaaatcgtgtcacgatt 5258626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 436
Target Start/End: Complemental strand, 27986017 - 27985971
Alignment:
Q  390 caaaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 436  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 27986231 - 27986180
Alignment:
Q  137 ccaagtctctctctcttccaac-ctcttcttcaaatctgcacaagaacacttaa 189  Q
    |||||| ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  27986231 ccaagtttctctctcttccaactctcttc--caaatctgcacaagaacacttaa 27986180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 39032075 - 39032025
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| || |||||||||||| ||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 39032025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 40735351 - 40735255
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  40735351 caaggtgtttacaatgtttcctaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 40735255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 442
Target Start/End: Complemental strand, 1730957 - 1730916
Alignment:
Q  401 cacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||    
T  1730957 cacgatttctctgttcttccaaaccacaaatttgaagccaat 1730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 302; Significance: 1e-169; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 44 - 451
Target Start/End: Complemental strand, 7122672 - 7122265
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  7122672 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtc 7122573  T
Q  144 tctctctcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    ||||||| ||| | | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7122572 tctctct-ttcaaccttctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacg 7122474  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||    
T  7122473 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga-ttt 7122375  T
Q  343 gca-ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    ||| ||||| ||||||||||||||||| |   |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  7122374 gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaa 7122275  T
Q  442 tctcaacaga 451  Q
     |||||||||    
T  7122274 actcaacaga 7122265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 5138274 - 5137875
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||||    
T  5138274 tctctctacaaggtatttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtttctctc 5138175  T
Q  150 tcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 248  Q
    |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  5138174 t--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtcacgatttgc 5138077  T
Q  249 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-c 346  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||| ||||| |||||| |    
T  5138076 gtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacga-tttgcacc 5137978  T
Q  347 cctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    |||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  5137977 cctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctca 5137878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 5136049 - 5135649
Alignment:
Q  50 tctctttacaaggtgtttcccatgtttt-caacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctct 148  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||    
T  5136049 tctctctacaaggtatttcccatgtttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtttctct 5135950  T
Q  149 ctcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  5135949 ct--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtcacgatttg 5135852  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca- 345  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||| ||||| ||||||     
T  5135851 cgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacga-tttgcac 5135753  T
Q  346 ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctc 445  Q
    ||||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  5135752 ccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctc 5135653  T
Q  446 aaca 449  Q
    ||||    
T  5135652 aaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 8395589 - 8395191
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||  |    
T  8395589 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctct--c 8395492  T
Q  150 tcttccaa-cctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    |||||||| ||||| ||||||||||||||||||||||||| | |||||| |||||||| ||  |||||||||||||||| || |||||||||||||| ||    
T  8395491 tcttccaaccctctctcttcaaatctgcacaagaacacttta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctg 8395393  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca-c 346  Q
    ||| |  |||||| |||||||||||||||||| ||||||||||||||||||||||  ||| |||||||||||| ||  |||||||  |||| |||||| |    
T  8395392 cgtaccacccaagaaacgaccagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacga-tttgcacc 8395294  T
Q  347 cctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    |||| ||||||||||||||||| |   |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8395293 cctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctca 8395194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 50 - 450
Target Start/End: Complemental strand, 8393380 - 8392981
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||| |||||||||    
T  8393380 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccataaaccctagagcttcccctttgatttcccaggtctctctc 8393281  T
Q  150 tcttccaacc-tct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    |  ||||||| ||| ||||||||||||||||||||||||| | |||||| |||||||| ||  |||||||||||||||| || |||||||||||||| ||    
T  8393280 t--tccaaccctctctcttcaaatctgcacaagaacacttta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctg 8393184  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||| |  |||||| || ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| ||  ||||||| |||||||| |||||    
T  8393183 cgtaccacccaagaaaagaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacc 8393085  T
Q  348 c-tgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    | || ||||||||||||||||| |   |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8393084 cctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctca 8392985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 44 - 451
Target Start/End: Original strand, 31495495 - 31495904
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaag 141  Q
    ||||| ||||| | ||||||||||||||||||| | |||||||||||  ||||||||||||| |  |||||||||||||| | |||||||||| ||||||    
T  31495495 tgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctataaaccctagagttactccctttgatttcccaag 31495593  T
Q  142 tctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
    | ||||||||||||||| ||| |||||||||||||||||||||||||| || ||| | ||| ||  |  |||||||||||||||| ||   | |||||||    
T  31495594 tttctctctcttccaac-tctccttcaaatctgcacaagaacacttaaatattagccctccactgataaaatcgtgtcacgattt-ccaggttgtgtcac 31495691  T
Q  242 gatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgat 339  Q
    ||||  ||||| ||||||||| |||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||||||||||    
T  31495692 gattggtgcgttcgtcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgat 31495791  T
Q  340 tttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaaga 438  Q
    || |||||||| || || ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  31495792 ttggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 31495890  T
Q  439 c-aatctcaacaga 451  Q
    | ||||||||||||    
T  31495891 caaatctcaacaga 31495904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 58 - 449
Target Start/End: Original strand, 13992485 - 13992879
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||||     
T  13992485 caaggtgtttacaatgtttcccaacccaagagagactctaatcaaaga-ccctaaaccctaaagttgctacctttgatttcccaagtttctctctcttc- 13992582  T
Q  156 aacctcttcttc-aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtcc 252  Q
    || |||| | || |||||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| ||  ||||||||||||||  | ||| |    
T  13992583 aagctctccctccaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt-ccagatcgtgtcacgattgatacgtac 13992681  T
Q  253 gtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaa 352  Q
    ||| ||||| | ||||||||||||||| | | ||||||||||||||||| |  ||||||||||||||||||| |||||||||||||||| |||||||| |    
T  13992682 gtcacaaggtatgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgca 13992781  T
Q  353 accctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    | || |||||||| || | |  |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  13992782 aacc-agctcacgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 149 - 450
Target Start/End: Original strand, 24742277 - 24742578
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| || |||||||||||||||||||  ||  |||||||||||||||     |||||||||||||||| ||  |||||| |||||||||    
T  24742277 ctcttccaagctctcctacaaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt-ccagatcgtggcacgatttg 24742375  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||||||| || ||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |    
T  24742376 cgtccgttcccaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtc 24742475  T
Q  348 ctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    ||| ||  |||||||||||||||||  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||    
T  24742476 ctgcaa-actagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 24742574  T
Q  447 acag 450  Q
    ||||    
T  24742575 acag 24742578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 257 - 449
Target Start/End: Complemental strand, 7124681 - 7124489
Alignment:
Q  257 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca-ccctgaaacc 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||| ||||| ||||    
T  7124681 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga-tttgcacccctgcaacc 7124583  T
Q  356 ctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||||| |   |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7124582 ctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaactcaaca 7124489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 18856125 - 18856309
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  ||| || |||||||||||| || | || | | ||||||    
T  18856125 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctcac 18856224  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  18856225 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 56141750 - 56141511
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||| |||||||| || | ||||||||||||||||| || | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  56141750 aatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 56141652  T
Q  310 tgtcacgatttcccacaatcgtgtcacgatttt-gcaccctgaaaccctagctcacggcacctcc-aatcgtgtcacgattccaaaatcgtggcacgatt 407  Q
    |||||||||||||||  |||||| ||||||||| ||  |||| ||  |||||||||| | ||||| |||||||||||||| ||||||||||| |||||||    
T  56141651 tgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaa-actagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatt 56141553  T
Q  408 tccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    || ||||||||||||||||||||||||||| |||| ||||||    
T  56141552 tctctgttcttccagaccacaaatttgaagccaatatcaaca 56141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 210 - 449
Target Start/End: Original strand, 51520812 - 51521050
Alignment:
Q  210 caatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    |||| ||| |||||||| || ||||||||||||||||||||| | ||||||| | || |||||||||||| ||||||||||||||||||||||   ||||    
T  51520812 caattgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gatcagtccttatcagggatacttaacgagcaagtttctgaatcg 51520910  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    ||||| |||||||||  |||||| |||||||| ||  |||| || | ||||||||||| |||  || |||||||||||| ||||||||||| ||||||||    
T  51520911 tgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 51521009  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  51521010 ctctgttcttccagaccacaaatttgaagccaatatcaaca 51521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 7124891 - 7124785
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  7124891 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtc 7124792  T
Q  144 tctctct 150  Q
    |||||||    
T  7124791 tctctct 7124785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 45347501 - 45347324
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||| || | || | | ||||||    
T  45347501 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 45347402  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||| ||||    
T  45347401 ggcatctctaatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 28468217 - 28467977
Alignment:
Q  211 aatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 308  Q
    |||||||||||||||| || | |||||||||||||||  ||| |||| ||||| |||||||||||||||||  || ||||||||||||||||| |  |||    
T  28468217 aatcgtgtcacgattt-ccaagtcgtgtcacgatttgtacgtacgtcacaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgaaaatc 28468119  T
Q  309 gtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatt 407  Q
    |||||||||||| |||  ||||||||||||||| |||||||| || || ||||||||||| | |  |||||||| ||||| ||||| ||||| |||||||    
T  28468118 gtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacgatt 28468020  T
Q  408 tccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    || ||||||||||| ||||||||||||||| | ||||||||||    
T  28468019 tctctgttcttccataccacaaatttgaagccaaatctcaaca 28467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 232 - 451
Target Start/End: Complemental strand, 9224115 - 9223897
Alignment:
Q  232 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgt 331  Q
    ||||||||||||| |||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||    
T  9224115 atcgtgtcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 9224017  T
Q  332 gtcacgattttgcaccctgaaaccctagctcacggc-acctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaa 430  Q
    | |||||||| ||  |||| || | ||||||||||| || |  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  9224016 gccacgatttggcgtcctgcaaac-tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaa 9223918  T
Q  431 tttgaagacaatctcaacaga 451  Q
    ||||||| |||| ||||||||    
T  9223917 tttgaagccaatatcaacaga 9223897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 9228924 - 9228686
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||| |||||||| || | ||||||||||||| |||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||    
T  9228924 aatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcg 9228826  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc-acctccaatcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  |||||| |||||||| ||  |||| || |  |||||||||| || |  |||||||||||||| ||||||||||| ||||||||    
T  9228825 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacg-agctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 9228727  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  9228726 ctctgttcttccagaccacaaatttgaagccaatatcaaca 9228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 231 - 388
Target Start/End: Original strand, 29761040 - 29761197
Alignment:
Q  231 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcg 330  Q
    ||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  ||||    
T  29761040 aatcgtgccacgatttgcgtccgtaccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcg 29761139  T
Q  331 tgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgatt 388  Q
    || |||||||| ||  |||| ||  |||||||||||||||||  |||||||||||||||    
T  29761140 tgccacgatttggcgtcctgcaa-actagctcacggcacctcgaaatcgtgtcacgatt 29761197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 334 - 449
Target Start/End: Original strand, 18860406 - 18860521
Alignment:
Q  334 cacgattttgcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaattt 433  Q
    |||||||||||| || | || | | ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  18860406 cacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaattt 18860505  T
Q  434 gaagacaatctcaaca 449  Q
    |||| |||| ||||||    
T  18860506 gaagccaatttcaaca 18860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 5733062 - 5733247
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  ||||||||||||||| ||  |||| || | |   ||||    
T  5733062 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcac 5733161  T
Q  365 ggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||| | || |||||||||||| ||||||||||| || |||||| |||||||| |||||||||||||||||| |||| ||||||    
T  5733162 ggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 5733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 3814422 - 3814605
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||||||| ||||||| |||||||| ||  | || || | | ||| ||    
T  3814422 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttccca-aatcgtgacacgatttggcgtcttgcaaactt-gcttac 3814519  T
Q  365 gg-cacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    || ||| |  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3814520 ggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 3814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 168 - 320
Target Start/End: Complemental strand, 31985389 - 31985236
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| |||||||||||  ||  |  ||||||| |||||||| || |||||||||||||||  ||||| |||| ||||| |||    
T  31985389 aaatctgcacaagaacacttaaatactagtcttcaactgataaaatcgtgccacgattt-ccaaatcgtgtcacgattgatgcgtacgtcacaaggtacg 31985291  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 320  Q
    |||||||||||||  | | ||||||| ||||||||| |  |||||||||||||||    
T  31985290 accagtccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattt 31985236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 269 - 409
Target Start/End: Complemental strand, 18712435 - 18712295
Alignment:
Q  269 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacgg-c 367  Q
    |||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| ||  ||||||||||| |    
T  18712435 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa-actagctcacggcc 18712337  T
Q  368 acctccaatcgtgtcacgattccaaaatcgtggcacgatttc 409  Q
    || |  |||||||||||||| ||||||||||| |||||||||    
T  18712336 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 18712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 45356982 - 45356861
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||| || | || | | ||||||    
T  45356982 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 45356883  T
Q  365 ggcacctccaatcgtgtcacga 386  Q
    |||| ||| |||||||||||||    
T  45356882 ggcatctcaaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 326 - 458
Target Start/End: Complemental strand, 31985251 - 31985118
Alignment:
Q  326 aatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagac 424  Q
    |||||||||||||||| ||||||||  | | |||||||||| | | | || |||||||||||| ||||| ||||| ||||||||| |||||||| ||||     
T  31985251 aatcgtgtcacgatttggcaccctgctaac-tagctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagat 31985153  T
Q  425 cacaaatttgaagac-aatctcaacagagtggtct 458  Q
    ||||||||||||| | |||||||||| ||| ||||    
T  31985152 cacaaatttgaagccaaatctcaacaaagttgtct 31985118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 137 - 353
Target Start/End: Complemental strand, 5268986 - 5268769
Alignment:
Q  137 ccaagtctctctctcttccaacctcttcttcaaa-tctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcg 235  Q
    |||||| ||||||||||| || |||| ||||||| ||||||||||||||||||  ||  |||||||  || ||  |||||||||||| || ||| |||||    
T  5268986 ccaagtttctctctcttc-aagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcg 5268888  T
Q  236 tgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgt 333  Q
    || |||||||  ||||| || ||||||| |||||||  |||||||  | | || || | | ||||||| |  ||||||||||| ||||||| |||||||     
T  5268887 tgacacgattggtgcgtacgacccaaggtacgacca-accttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtga 5268789  T
Q  334 cacgattttgcaccctgaaa 353  Q
    |||||||  |||||||||||    
T  5268788 cacgattgagcaccctgaaa 5268769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 374 - 442
Target Start/End: Complemental strand, 8689114 - 8689044
Alignment:
Q  374 aatcgtgtcacgatt--ccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||||||| ||  ||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  8689114 aatcgtgtcacgttttcccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 30000005 - 30000101
Alignment:
Q  58 caaggtgtttcccatgttttcaa-cccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| ||| ||||||||| |||||||||||||| |||||||||||| ||||| | ||||||||| ||||||| |||||||||||    
T  30000005 caaggtgtttacaatgtttccaaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgtctcctttgatttcccaagtttctctctcttc 30000101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 5143807 - 5143859
Alignment:
Q  390 caaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5143859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 16628403 - 16628353
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 16628353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 38151968 - 38151918
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 38151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 48143010 - 48142914
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  48143010 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 48142914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 462 - 590
Target Start/End: Complemental strand, 48968560 - 48968424
Alignment:
Q  462 atctgatatcaaatctcttacacatccatatgttggtttcaaaccatggcaacacatc-------ttgacctaaacttattccctttctccaggtactca 554  Q
    |||||||||| ||| | ||||| |||||| ||| | |||||||||| ||||||||||        ||||| |||||| ||||||||  ||||||||||||    
T  48968560 atctgatatcgaatattttacatatccatctgtcgatttcaaaccacggcaacacattgtatttgttgacataaactcattcccttattccaggtactca 48968461  T
Q  555 atcgattaac-cttttttggtcaattaagtgtaattt 590  Q
    ||| ||||||  ||||||||| ||||| |||||||||    
T  48968460 atctattaacttttttttggttaattaggtgtaattt 48968424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 52082857 - 52082953
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  52082857 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 52082953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 3778116 - 3778165
Alignment:
Q  393 aatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 3778165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 52093885 - 52093960
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  52093885 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 52093960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 374 - 442
Target Start/End: Original strand, 5148226 - 5148294
Alignment:
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||||||| |   ||||||||| ||||||||| || |||||||| ||||||||||||||| ||||    
T  5148226 aatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaat 5148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 5268750 - 5268699
Alignment:
Q  391 aaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||| || ||||||||| ||||||||||| ||||||||||||||| ||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 693
Target Start/End: Complemental strand, 48968356 - 48968321
Alignment:
Q  658 ttggttcagtttcatttacattaacgttaaaatact 693  Q
    |||||| |||||||||||||||||||||||||||||    
T  48968356 ttggtttagtttcatttacattaacgttaaaatact 48968321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 5370523 - 5370557
Alignment:
Q  306 atcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    ||||||||||||||||||| |||||||||||||||    
T  5370523 atcgtgtcacgatttcccaaaatcgtgtcacgatt 5370557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 5429647 - 5429551
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||| ||||||| |||||||||||    
T  5429647 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacttcctttgatttcccaagtttctctctcttc 5429551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 6742946 - 6742896
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| |||| |||||||||| ||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaat 6742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 9927657 - 9927753
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  9927657 caaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 9927753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 10047932 - 10047982
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||  ||||||||||| ||||||||||||||| ||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaat 10047982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 16622824 - 16622774
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaat 16622774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 37740594 - 37740498
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| | || || ||||||||| ||||||| |||||||||||    
T  37740594 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaacttacctcctttgatttcccaagtttctctctcttc 37740498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 52095562 - 52095658
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||  |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  52095562 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagt-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 52095658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 56178836 - 56178932
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| || | ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  56178836 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 56178932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 12739771 - 12739846
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| | ||||| |||||||||||    
T  12739771 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 12739846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 12747977 - 12748052
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| | ||||| |||||||||||    
T  12747977 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 12748052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 300; Significance: 1e-168; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 50 - 449
Target Start/End: Original strand, 3909 - 4310
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  3909 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 4008  T
Q  150 tcttccaac---ctctt-cttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt 245  Q
    |  ||||||   ||||  ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  4009 t--tccaactctctctcacttcaaatctgcacaggaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaattgtgtcacgatt 4106  T
Q  246 tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| ||||||    
T  4107 tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga-tttgca 4205  T
Q  346 -ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatct 444  Q
     ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4206 cccctgcaaccctagctcacggcacctaaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatct 4305  T
Q  445 caaca 449  Q
    |||||    
T  4306 caaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 300; Significance: 1e-168; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 44203617 - 44203218
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  44203617 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 44203518  T
Q  150 tcttccaac-ctcttc-ttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    |  |||||| |||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44203517 t--tccaactctcacccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttg 44203420  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca-c 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| ||||| |||||| |    
T  44203419 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-tttgcacc 44203321  T
Q  347 cctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44203320 cctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctca 44203221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 9036407 - 9036003
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9036407 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgatttcccaagtc 9036308  T
Q  144 tctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacga 243  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||| | ||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  9036307 tctctctctttcaaactcctcttcaaatctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgattttcccaatcgtgtcacga 9036209  T
Q  244 tttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttg 343  Q
    | |||||    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| ||| ||||| ||||    
T  9036208 tctgcgtaacacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttg 9036109  T
Q  344 caccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    ||||||| || |||||||||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9036108 caccctgcaa-cctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 9036010  T
Q  443 ctcaaca 449  Q
    |||||||    
T  9036009 ctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 44 - 451
Target Start/End: Complemental strand, 40282367 - 40281956
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  40282367 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 40282268  T
Q  143 ctctctctcttccaac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
     ||||||||||||||| ||| ||||||||||||||||||||||||||| |||  | ||||| ||  |  ||||||||||||| |||||  ||||||||||    
T  40282267 ttctctctcttccaactctc-tcttcaaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacga-tttcctgatcgtgtcac 40282170  T
Q  242 gatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttcccacaatcgtgtcacga 338  Q
    ||||  ||| |||||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  40282169 gattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacga 40282070  T
Q  339 ttttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||| |||||||| || |||||||||||||||| |  |||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  40282069 tttggcaccctgcaa-cctagctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaag 40281971  T
Q  438 ac-aatctcaacaga 451  Q
    || ||||||||||||    
T  40281970 acaaatctcaacaga 40281956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 36 - 449
Target Start/End: Original strand, 20622408 - 20622821
Alignment:
Q  36 acagtcagtgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccc-tttgatt 134  Q
    ||||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  20622408 acagtcaatgattttccctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccatttgatt 20622507  T
Q  135 ccccaagtctctctctcttccaacctcttcttcaaatctgcacaagaacacttaag-tactagtcttcctctattccaatcgtgtcacgattttcccaat 233  Q
     |||||||||||||||  ||||||| |  |||||||  ||||||||||||||| |  |||||| ||||||||    |||| ||||||||||||||| |||    
T  20622508 tcccaagtctctctct--tccaaccccc-cttcaaagatgcacaagaacactttatatactagccttcctctgaagcaattgtgtcacgattttccaaat 20622604  T
Q  234 cgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgt 333  Q
    | || |||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20622605 catgccacgatttgcgtaccacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgt 20622704  T
Q  334 cacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatt 432  Q
    |||||||| ||||||||  |  ||||||||||||||| |  |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  20622705 cacgatttggcaccctg-cagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatt 20622803  T
Q  433 tgaagac-aatctcaaca 449  Q
    ||||||| ||||||||||    
T  20622804 tgaagacaaatctcaaca 20622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 56 - 451
Target Start/End: Complemental strand, 21053936 - 21053538
Alignment:
Q  56 tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttc 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21053936 tacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttc 21053837  T
Q  155 caac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtc 251  Q
    |||| |||  |||||||||||||||||||||||||| |||  | ||||| ||  |  ||||||||||||| |||||  ||||||||||||||  ||| ||    
T  21053836 caactctc-acttcaaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacga-tttcctgatcgtgtcacgattggtgcatc 21053739  T
Q  252 cgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctg 350  Q
    |||| ||||| | ||||||||||||||| ||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||| ||    
T  21053738 cgtctcaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttg 21053639  T
Q  351 aaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
      |  ||||||||| ||||| |  |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21053638 -cattctagctcactgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 44 - 450
Target Start/End: Complemental strand, 9987192 - 9986784
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  9987192 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 9987093  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    || |||||||||||| |||  |||||||||||||||||||||||||| |||||| | ||| ||  |  ||| ||||||||| |||||  |||||||||||    
T  9987092 ctatctctcttccaa-ctcaccttcaaatctgcacaagaacacttaaatactagccctccactgataaaattgtgtcacga-tttccagatcgtgtcacg 9986995  T
Q  243 att--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    |||  ||| |||||||||||| | ||||||||||||| | ||| |||||||||||||||||    ||||||||||||||||||| |||||||||||||||    
T  9986994 attggtgcatccgtcccaaggtatgaccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatt 9986895  T
Q  341 ttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac 439  Q
    | |||| ||| |  || ||||||||||||| |  |||||||| |||||  |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  9986894 tggcacactgcagacc-agctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagac 9986796  T
Q  440 -aatctcaacag 450  Q
     |||||||||||    
T  9986795 aaatctcaacag 9986784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 265 - 449
Target Start/End: Complemental strand, 44023561 - 44023377
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||| || | || | | ||||||    
T  44023561 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 44023462  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44023461 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 44023377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 168 - 449
Target Start/End: Complemental strand, 19366051 - 19365768
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| || | ||||||||||||| |  ||| |||| ||| | |||    
T  19366051 aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaatgtacg 19365953  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    ||| |||||||||  ||| | ||||||||||||||| |  |||||||||||||||||||  ||||||||||||||| |||||||| || || ||||||||    
T  19365952 acctgtccttatcctggaaaattaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 19365854  T
Q  366 gcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    ||| | | || |||||||||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  19365853 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagtcaaatctcaaca 19365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 265 - 449
Target Start/End: Complemental strand, 1054698 - 1054514
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| || | | ||||||    
T  1054698 gaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcac 1054599  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1054598 ggcacctccaatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1054514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 39445898 - 39446082
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||||||||||||||  |||||||||| |||||||||  |||||| |||||||| ||  |||| || | | ||||||    
T  39445898 gaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcac 39445997  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  39445998 ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 39446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 25439583 - 25439406
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||  |||||| |||||||||||| |||| || | | ||||||    
T  25439583 gaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctcac 25439484  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| ||| ||||||||||||||| | |||||||| ||||||| | ||||||||||||||||||||||||||| ||||    
T  25439483 ggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 231 - 449
Target Start/End: Complemental strand, 19361133 - 19360912
Alignment:
Q  231 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaat 328  Q
    ||||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| |  |||||||||||||||||||  ||    
T  19361133 aatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagat 19361034  T
Q  329 cgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccac 427  Q
    ||||||||||||| |||||||| || || ||||||||||| | |  |||||||||||||| ||||| ||||| ||||||||| |||||||| ||||||||    
T  19361033 cgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccac 19360935  T
Q  428 aaatttgaagac-aatctcaaca 449  Q
    |||||||||| | ||||||||||    
T  19360934 aaatttgaagccaaatctcaaca 19360912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 25444776 - 25444599
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| | ||||||||  ||||||||||||||||||||  |||||| |||||||||||| |||  || | | ||||||    
T  25444776 gaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctcac 25444677  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| ||| ||||||||||||||| | |||||||| ||||||| | ||||||||||||||||||||||||||| ||||    
T  25444676 ggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 58 - 449
Target Start/End: Complemental strand, 51765363 - 51764990
Alignment:
Q  58 caaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcca 156  Q
    |||||||||| | |||||| ||||||||||||  |||||||||||| |||||||||||||||||| | |||||||||| ||||||| |||| ||||||||    
T  51765363 caaggtgtttacaatgtttccaacccaagagaagctctaatcaaag-accctaaaccctagagttactccctttgatttcccaagtttctcactcttcca 51765265  T
Q  157 ac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtc 255  Q
    || | ||||   |||||||||||||||||||||| |||||| ||||| ||  |  |||||||||||||||                    | ||| ||||    
T  51765264 actcccttc--aaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt------------------ggtacgtacgtc 51765185  T
Q  256 ccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaacc 355  Q
     ||||| | ||||||||||||||| ||| |||||||||||||||||    |||||||||||||| | ||  ||||||||||||||| |||||||| || |    
T  51765184 acaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaac 51765085  T
Q  356 ctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    | ||||||||||| | |  ||||||||||||||  |||| ||||| ||||||||| ||||||||||||||||||||||| ||| | ||||||||||    
T  51765084 c-agctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaaatctcaaca 51764990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 265 - 437
Target Start/End: Original strand, 41391002 - 41391173
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  ||||||||| |||||||||||   ||| |||||||||||||||  |||||| |||||||| ||  |||| || | | ||||||    
T  41391002 gaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcac 41391100  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  41391101 ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 41391173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 191 - 388
Target Start/End: Complemental strand, 24793904 - 24793708
Alignment:
Q  191 tactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaa 290  Q
    |||||||||||||||    |||||||| |||||||| ||  |||||||||||||||||||| | |||||||   ||||||||||||||||||||||||||    
T  24793904 tactagtcttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaa 24793806  T
Q  291 cgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgatt 388  Q
    ||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| ||  |||||||||||||||||  |||||||||||||||    
T  24793805 cgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa-actagctcacggcacctcgaaatcgtgtcacgatt 24793708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 168 - 320
Target Start/End: Complemental strand, 24202513 - 24202360
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||| ||||||||||||||||| |||||| ||||||||  | ||||||||||||||||| ||  ||||||||||||||||  ||| |||||||||  | |    
T  24202513 aaatatgcacaagaacacttaaatactagccttcctctgatacaatcgtgtcacgattt-ccagatcgtgtcacgatttgaacgtgcgtcccaagatatg 24202415  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 320  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  24202414 accagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattt 24202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 149 - 371
Target Start/End: Complemental strand, 24787125 - 24786904
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| |||||||   ||||||||||||  ||  |||||||||||||||    |||||||| |||||||| ||  ||||||||||||||||    
T  24787125 ctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttg 24787027  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    |||| | |||||||   ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |    
T  24787026 cgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtc 24786927  T
Q  348 ctgaaaccctagctcacggcacct 371  Q
    ||| ||  ||||||||||||||||    
T  24786926 ctgcaa-actagctcacggcacct 24786904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 326 - 449
Target Start/End: Complemental strand, 24202375 - 24202251
Alignment:
Q  326 aatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagac 424  Q
    |||||||||||||||| |||||||| || || ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||| ||||||||||||||    
T  24202375 aatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagac 24202277  T
Q  425 cacaaatttgaagac-aatctcaaca 449  Q
    ||||||||||||| | ||||||||||    
T  24202276 cacaaatttgaagccaaatctcaaca 24202251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 13604334 - 13604095
Alignment:
Q  211 aatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 308  Q
    ||||||| |||| |||||| |||||||||||||||  | ||| || ||||||| |||||||  |||||||  | | ||||||| ||||||||| |  |||    
T  13604334 aatcgtgccacg-ttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatc 13604237  T
Q  309 gtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatt 407  Q
     |||||||||| | || ||||||||||||||||  ||| ||| || || |||||||| || | | || ||||| |||||| ||| ||||||| |||||||    
T  13604236 atgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaacc-agctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatt 13604138  T
Q  408 tccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    || ||||||||||| ||||||||||||||||| ||||||||||    
T  13604137 tctctgttcttccaaaccacaaatttgaagacaaatctcaaca 13604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 388
Target Start/End: Original strand, 41398657 - 41398779
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||| ||||||||| |||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| ||  || ||||||    
T  41398657 gaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa-actggctcac 41398755  T
Q  365 ggcacctccaatcgtgtcacgatt 388  Q
    |||| ||| |||||||||||||||    
T  41398756 ggcatctcaaatcgtgtcacgatt 41398779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 43988133 - 43987956
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| |||  |||||| |||||||||||  || | || | | ||||||    
T  43988133 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattttgcttccagcaaacttggctcac 43988034  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  |||  |||||||||||||| | |||||| | ||||||| | ||| ||| ||| ||||||||||||||| ||||    
T  43988033 tgcctctctgatcgtgtcacgattgccaaatcgcgacacgattcctctgctctcccaaaccacaaatttgaagccaat 43987956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 13316518 - 13316647
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||| |    
T  13316518 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgctacctttgatttcccaagtttctctctctt-c 13316614  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || ||| ||||| ||||||||| |||||||||||    
T  13316615 aagctcatcttcaaaatctgca-aagaacactta 13316647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 24793723 - 24793666
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24793666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 20762640 - 20762544
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||||    
T  20762640 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 20762544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 189
Target Start/End: Complemental strand, 44455128 - 44454997
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||| | |||||||||||||| |||| ||||||| |||| || |||||||||  |||||| ||||||||| |     
T  44455128 caaggtgtttacaatgtttcccaacccaagaaa-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttaccaagtttctctctctac- 44455032  T
Q  156 aacctcttcttcaaa-tctgcacaagaacacttaa 189  Q
    ||||||| ||||||| |||||||||||||||||||    
T  44455031 aacctctccttcaaaatctgcacaagaacacttaa 44454997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 3156812 - 3156705
Alignment:
Q  79 aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttccaacctcttcttc-aaatctgca 176  Q
    ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||| | |||| |||| |||||||||    
T  3156812 aacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcc-agctctccttcaaaatctgca 3156716  T
Q  177 caagaacactta 188  Q
     |||||||||||    
T  3156715 -aagaacactta 3156705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 13598967 - 13599017
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 31659206 - 31659110
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  31659206 caaggtgtttacaatgtttccgaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 31659110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 450
Target Start/End: Original strand, 41398764 - 41398822
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 450  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||| |||  |||||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaaatcaacag 41398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 19358587 - 19358530
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgatt 225  Q
    |||||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||    
T  19358587 aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt 19358530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 21536170 - 21536125
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||    
T  21536170 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 28220447 - 28220522
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  28220447 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 28220522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 28223642 - 28223717
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  28223642 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 28223717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 37503754 - 37503883
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | || ||||| ||||||| ||| |||||||||||||| |||| ||||||| |||  || ||||||||| ||||||| |||||||||| |    
T  37503754 caaggtgtttacaatattttccaacccaataga-actctaatcaaaga-ccctcaaccctaaagtcacctcctttgatttcccaagtttctctctctt-c 37503850  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    ||||||| |||| ||||||||| |||||||||||    
T  37503851 aacctctccttcaaaatctgca-aagaacactta 37503883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 37070334 - 37070378
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 436  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 37070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 3189299 - 3189203
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  3189299 caaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 3189203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 3198116 - 3198020
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  3198116 caaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 3198020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 3206955 - 3206859
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  3206955 caaggtgtttacaatgtttcccaacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 3206859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 19361176 - 19361142
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcc 202  Q
    |||||||||||||||||||||| ||||||||||||    
T  19361176 aaatctgcacaagaacacttaaatactagtcttcc 19361142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 340
Target Start/End: Complemental strand, 20762392 - 20762358
Alignment:
Q  306 atcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    ||||||||||||||||||| |||||||||||||||    
T  20762392 atcgtgtcacgatttcccaaaatcgtgtcacgatt 20762358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 10925191 - 10925062
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| ||| |||||||||| |||| ||||||| |||| || |||||||||  |||||| |||||||||| |    
T  10925191 caaggtgtttacaatgtttcccaacccaagaga-actataatcaaaga-ccctcaaccctaaagttacctcctttgattttccaagtttctctctctt-c 10925095  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || |||| |||| ||||||||| |||||||||||    
T  10925094 aagctctccttcaaaatctgca-aagaacactta 10925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 50 - 449
Target Start/End: Original strand, 2787 - 3185
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  2787 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 2886  T
Q  150 tcttccaac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 248  Q
    |  |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2887 t--tccaactctctccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 2984  T
Q  249 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca-cc 347  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||| ||    
T  2985 gtccgtcccaaggaacgaccagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga-tttgcaccc 3083  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||||||||||||| |   |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3084 ctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 3183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 50 - 449
Target Start/End: Original strand, 12647569 - 12647967
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  12647569 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 12647668  T
Q  150 tcttccaac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 248  Q
    |  |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12647669 t--tccaactctctccttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 12647766  T
Q  249 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca-cc 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||| |||||| ||    
T  12647767 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacga-tttgcaccc 12647865  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||||||||||||| |   |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12647866 ctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 12647965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 44 - 450
Target Start/End: Complemental strand, 6266681 - 6266273
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  6266681 tgattttctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 6266582  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    ||||||||||||| | |||| |||||||||||||||||||||||||| |||||| | ||| ||  |  ||||||||||||| |||||   ||||||||||    
T  6266581 ctctctctcttccca-ctctccttcaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacga-tttccaggtcgtgtcacg 6266484  T
Q  243 att--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    |||  ||||| ||||||||| |||||||| ||||||||| ||| |||||||||| ||||||    |||||||||||||||||||||||||||||||||||    
T  6266483 attggtgcgttcgtcccaagaaacgaccattccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatt 6266384  T
Q  341 ttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac 439  Q
    | |||||||| || || ||||||||||| | |  ||| ||||||||||  |||| ||||| |||||||||| ||||||||||||||||||||||||||||    
T  6266383 tggcaccctgcaaacc-agctcacggcatcacgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaagac 6266285  T
Q  440 -aatctcaacag 450  Q
     |||||||||||    
T  6266284 aaatctcaacag 6266273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 58 - 449
Target Start/End: Original strand, 4484530 - 4484923
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | |||||||||||  ||||||||||||| ||||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  4484530 caaggtgtttacaatgtttcccaacccaagagaagctctaatcaaaga-ccctaaaccctagagttactccctttgatttcccaagtttctctctcttcc 4484628  T
Q  156 aacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccg 253  Q
    ||| |||  ||||||||||||||||||||||||| |||||| ||||| ||  |  |||||||||||||||| ||  |||||||||||||| |  ||| ||    
T  4484629 aac-tctctttcaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt-ccagatcgtgtcacgattggtacgtacg 4484726  T
Q  254 tcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaa 353  Q
    |||||||| |||||||||||||||||  || |||||||||||||||||    |||||||||||||| |  |  ||||||||||||||| |||||||| ||    
T  4484727 tcccaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaa 4484826  T
Q  354 ccctagctcacggcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag-acaatctcaaca 449  Q
     | |||||||||||| | |  |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  4484827 ac-tagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtaaaatctcaaca 4484923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 449 - 595
Target Start/End: Original strand, 1556496 - 1556642
Alignment:
Q  449 agagtggtctgatatctgatatcaaatctcttacacatccatatgttggtttcaaaccatggcaacacatcttgacctaaacttattccctttctccagg 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1556496 agagtggtctgatatctgatatcaaatctcttacacatccatatgttggtttcaaaccatggcaacacatcttgacctaaacttcttccctttctccagg 1556595  T
Q  549 tactcaatcgattaaccttttttggtcaattaagtgtaatttctttg 595  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  1556596 tactcaatcgattaacctcttttggtcaattaagtgtaatttctttg 1556642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 149 - 449
Target Start/End: Complemental strand, 9296162 - 9295862
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacactt-aagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| || ||||   |||||||||||||| || |||||||||||||||    |||||||||||||||||||  | |||||||||||||||    
T  9296162 ctcttccaagctctcctccaaaaaagcacaagaacactttaaatactagtcttcctctgaagcaatcgtgtcacgattttcaga-tcgtgtcacgatttg 9296064  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    |||||| ||||||| | |||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||  |||||| |||||||| ||| |    
T  9296063 cgtccgacccaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatc 9295964  T
Q  348 ctgaaaccctagctcacggcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    ||| ||  ||||||||||||||| |  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||    
T  9295963 ctgcaa-actagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 9295865  T
Q  447 aca 449  Q
    |||    
T  9295864 aca 9295862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 78 - 449
Target Start/End: Complemental strand, 30833293 - 30832921
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttccaacctcttcttcaaatctgca 176  Q
    |||||||||| |  ||||||||||| ||||||||||||||||||| | |||||||||| ||||||| ||| ||||||||| | ||  |||||||||||||    
T  30833293 caacccaagataagctctaatcaaa-aaccctaaaccctagagttactccctttgatttcccaagtttctttctcttccagc-tcaccttcaaatctgca 30833196  T
Q  177 caagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtcct 274  Q
    ||||||||||||| |||||||||||| ||  |  |||||||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||||| |||||    
T  30833195 caagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtcct 30833097  T
Q  275 tatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-c 373  Q
    ||||  ||| ||||||||||||||||| |  |||||||||||||||||||  ||||||||||||||| |||||||| || || ||||||||||| | |      
T  30833096 tatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacga 30832998  T
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    ||||||||||||||  |||| || || ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  30832997 aatcgtgtcacgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 30832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 58 - 449
Target Start/End: Complemental strand, 32289541 - 32289148
Alignment:
Q  58 caaggtgtttcccatgttttcaa-cccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| |||||||| ||| |||||||||  ||||||||||||| | ||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  32289541 caaggtgtttaccatgtttccaaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaagtttctctctcttcc 32289443  T
Q  156 aacctcttcttcaaa-tctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtcc 252  Q
    | |  |  ||||||| ||||||||||||||||||| |||||| | ||| ||  |  |||||||||||||||| ||   ||||||||||||| |  ||| |    
T  32289442 atctcc--cttcaaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt-ccaggtcgtgtcacgattggagcgtac 32289346  T
Q  253 gtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaa 352  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||||||| | ||  ||||||||| ||||| |||||||| |    
T  32289345 gtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgca 32289246  T
Q  353 accctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    | || ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  32289245 aacc-agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 32289148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 168 - 451
Target Start/End: Original strand, 14291844 - 14292127
Alignment:
Q  168 aaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacga 266  Q
    ||||||||||||||||||  ||  |||||||||||||||     ||||||| |||||||| ||  ||||||||||||||||||| |  ||||||| | ||    
T  14291844 aaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggtatga 14291942  T
Q  267 ccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacgg 366  Q
    |||||||||||||  | |||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| || | ||||||||||    
T  14291943 ccagtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacgg 14292041  T
Q  367 cacctcca-atcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaga 451  Q
    |||||| | ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  14292042 cacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaga 14292127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 149 - 437
Target Start/End: Original strand, 25409963 - 25410253
Alignment:
Q  149 ctcttccaacctcttcttcaaa-tctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| ||||||| ||||||||||||||||||| ||  |  ||||||||  |  ||| |||||||||||| || | ||||||||||||| |    
T  25409963 ctcttccaagctctacttcaaaatctgcacaagaacacttaaatatcatccttcctctgataaaattgtgtcacgattt-ccaagtcgtgtcacgattgg 25410061  T
Q  248 --cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca 345  Q
      ||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||||||  ||||||||||||||| |||    
T  25410062 tacgtacgtcacaaggtacgaccattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggca 25410161  T
Q  346 ccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||||| || || | ||||||||| | |  |||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  25410162 ccctgcaaacc-atctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 25410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 168 - 449
Target Start/End: Original strand, 3492094 - 3492377
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| |||||||||||| ||  |  ||| |||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||    
T  3492094 aaatctgcacaagaacacttaaatactagtcttccactgataaaattgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacg 3492192  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    ||| |||||||||  ||| |||||||||||||||||||  |||||||||||||||||||  ||||||||||||||| |||||||| || || ||||||||    
T  3492193 acctgtccttatcctggaaacttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcacg 3492291  T
Q  366 gcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    ||| | |  |||||||||||||| ||||| ||||| ||| ||||| |||||||| |||||||||||||||||| | ||||||||||    
T  3492292 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 3492377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 149 - 449
Target Start/End: Complemental strand, 11098687 - 11098387
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| ||||||| |||||||||||||||||||  ||  | |||||||||||||     ||||||| |||||||| ||  ||||||||||||||||    
T  11098687 ctcttccaagctcttctacaaatctgcacaagaacacaatatatgctagtcttcctctgaagaaatcgtgccacgattt-ccagatcgtgtcacgatttg 11098589  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||| |  |||||||   |||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |    
T  11098588 cgtacaacccaaggtttgaccagtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtc 11098489  T
Q  348 ctgaaaccctagctcacggcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    ||| ||  ||||||||||||||| |  ||||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||    
T  11098488 ctgcaa-actagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 11098390  T
Q  447 aca 449  Q
    |||    
T  11098389 aca 11098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 650 - 740
Target Start/End: Original strand, 1556691 - 1556781
Alignment:
Q  650 ttatgggtttggttcagtttcatttacattaacgttaaaatacttatttatttgggtaaaagatgattttgttgaagaatttggggtttgt 740  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1556691 ttatgggtttggttcagtttcatttacattaacgttaaaatacttatttattttggtaaaagatgattttgttgaagaatttggggtttgt 1556781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 172 - 449
Target Start/End: Original strand, 40739178 - 40739457
Alignment:
Q  172 ctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgacca 269  Q
    |||||||||||||||||| ||| |||||||  ||  |  |||||||||||||||| || |||||||||||||||  | ||| |||| ||||| ||||||     
T  40739178 ctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacct 40739276  T
Q  270 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcac 369  Q
    |||||||||  | | ||||||||||||||||| |  || ||||||| ||| | ||  ||||||||||||||| |||||||| || || |||||||||||     
T  40739277 gtccttatcctgaaaacttaacgagcaagtttgaaaattgtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggcat 40739375  T
Q  370 ctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
      |  |||||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||||||||||| | ||||||||||    
T  40739376 aacaaaatcgtgtcacgatgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaaatctcaaca 40739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 39811715 - 39811477
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||| |||||||| || | ||||||||||||| |||  | | ||||||| | ||| |||||||||||  |||||||||| ||||||||||   ||||    
T  39811715 aatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaaggca-gacaagtccttatcagtgatacttaaccagcaagtttctgaatcg 39811617  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacgg-cacctccaatcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  |||||| |||||||| ||  |||| || | | ||| |||| ||| |  |||||||||||||| ||||||||||| ||||||||    
T  39811616 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactt-gcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 39811518  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  39811517 ctctgttcttccagaccacaaatttgaagccaatatcaaca 39811477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 326 - 449
Target Start/End: Original strand, 32247229 - 32247352
Alignment:
Q  326 aatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagacc 425  Q
    ||||||| |||||||||||| || | || | | |||||||||| ||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  32247229 aatcgtgccacgattttgcatccagcaaacttggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagacc 32247328  T
Q  426 acaaatttgaagacaatctcaaca 449  Q
    |||||||||||| |||| ||||||    
T  32247329 acaaatttgaagccaatatcaaca 32247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 19344825 - 19345002
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| || ||||||||  || | || | | ||||||    
T  19344825 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctcac 19344924  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| |||| ||||| |||||||| | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  19344925 ggcatctccgatcgtatcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 19345002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 265 - 436
Target Start/End: Original strand, 19349683 - 19349854
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| | ||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | ||||||    
T  19349683 gaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 19349782  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 436  Q
    |||| |||| |||||||||||||| | |||| | | ||||||| | ||||||||||| ||||||||||||||    
T  19349783 ggcatctccgatcgtgtcacgattgccaaattgcgacacgattcctctgttcttccaaaccacaaatttgaa 19349854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 374 - 449
Target Start/End: Complemental strand, 44310546 - 44310471
Alignment:
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44310546 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 44310471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 5723454 - 5723565
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||| |||||||| ||||||| ||||||||| ||||||| |||||||||| |    
T  5723454 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagacccc-aaaccctaaagttgcctcctttgatttcccaagtttctctctctt-c 5723550  T
Q  156 aacctcttcttcaaa 170  Q
    || ||||||||||||    
T  5723551 aagctcttcttcaaa 5723565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 36205863 - 36205959
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| |||||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||||    
T  36205863 caaggtgtttaccatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 36205959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 39284853 - 39284724
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||| |    
T  39284853 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt-c 39284757  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    ||||||| |||| ||||||||| |||||||||||    
T  39284756 aacctctccttcaaaatctgca-aagaacactta 39284724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 4503332 - 4503428
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| ||||||||||||||||| ||||||||| ||||||  ||||||||| ||||||| |||||||||||    
T  4503332 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaacc-taaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 4503428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 45099723 - 45099627
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||||    
T  45099723 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 45099627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 368
Target Start/End: Complemental strand, 28258963 - 28258733
Alignment:
Q  137 ccaagtctctctctcttccaacctcttcttcaaa-tctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcg 235  Q
    |||||| ||||||||||| || |||||||||||| ||| ||||||||||||||  ||  |||||||   |  |  ||||||| |||| |||||| |||||    
T  28258963 ccaagtttctctctcttc-aagctcttcttcaaaatctacacaagaacacttatatagcagtcttcagttgataaaatcgtgccacg-ttttccaaatcg 28258866  T
Q  236 tgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgt 333  Q
    || |||||||  ||||| || ||||||| |||||||  |||||||  | | ||||||| ||||||||| |  |||||||||||||||| || ||| |||     
T  28258865 tgccacgattgatgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgc 28258767  T
Q  334 cacgattttgcaccctgaaaccctagctcacggca 368  Q
    ||||||||  ||||||| || || |||||||||||    
T  28258766 cacgatttgacaccctgcaaacc-agctcacggca 28258733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 8389681 - 8389631
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8389631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 36988275 - 36988371
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  36988275 caaggtgtttactatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 36988371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 36757477 - 36757425
Alignment:
Q  390 caaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||||| ||||||||  ||||||||||| ||||||||||||||| ||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 36757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 38312187 - 38312079
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttccaacctcttcttc-aaatctgc 175  Q
    |||||||||||| ||||||||||||||||| | ||||||| |||| || ||||||||| ||||| | |||||||||| ||| |||| |||| ||||||||    
T  38312187 caacccaagaga-actctaatcaaagaacc-tcaaccctaaagttacctcctttgatttcccaaatttctctctctt-caagctctccttcaaaatctgc 38312091  T
Q  176 acaagaacactta 188  Q
    | |||||||||||    
T  38312090 a-aagaacactta 38312079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 28258729 - 28258682
Alignment:
Q  390 caaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||||||||| ||||||||| ||||| ||||| |||||||||||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaag 28258682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 2334617 - 2334713
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||| | |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  2334617 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaata-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 2334713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 10706783 - 10706733
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| || |||||||||||| ||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 10706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 21630511 - 21630561
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| || |||||||||||| ||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaat 21630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 33528155 - 33528105
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| ||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 39483443 - 39483493
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||| ||||| ||||||||||| ||||||||||||||| ||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaat 39483493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 20522797 - 20522838
Alignment:
Q  401 cacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||    
T  20522797 cacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 270; Significance: 1e-150; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 50 - 451
Target Start/End: Original strand, 33342289 - 33342690
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  33342289 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 33342388  T
Q  150 tcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 248  Q
    |  |||||  ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  33342389 t--tccaaattctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgc 33342486  T
Q  249 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-caatcgtgtcacgattttgca-c 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||| ||||| |||||| |    
T  33342487 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacga-tttgcacc 33342585  T
Q  347 cctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    |||| ||||||||||||||||| |   ||||| ||| |||| ||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  33342586 cctgcaaccctagctcacggcatccgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaatctca 33342685  T
Q  447 acaga 451  Q
    |||||    
T  33342686 acaga 33342690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 16554859 - 16554454
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16554859 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 16554760  T
Q  144 tctctctcttccaac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||| |||||||| ||  |||||||||||||||||||||| || | |||||| |||||||| ||  |||||||||||||||| || ||||||||||||    
T  16554759 tctctcacttccaactcttctcttcaaatctgcacaagaacaattta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacg 16554661  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    || ||||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||| |||||    
T  16554660 atctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaatttt 16554561  T
Q  343 gcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    |||||||| || |||||||||||||||| |  |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  16554560 gcaccctgtaa-cctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaa 16554462  T
Q  442 tctcaaca 449  Q
    ||||||||    
T  16554461 tctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 44 - 449
Target Start/End: Original strand, 16578696 - 16579101
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16578696 tgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 16578795  T
Q  144 tctctctcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||| ||||||||  || |||||||||||||||||||||| || | |||||  |||||||| ||  |||||||||||||||| || ||||||||||||    
T  16578796 tctctcacttccaactcctctcttcaaatctgcacaagaacaattta-tactacccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacg 16578894  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    || ||||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||    
T  16578895 atctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttt 16578994  T
Q  343 gcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    |||||||| || |||||||||||||||| |  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16578995 gcaccctgcaa-cctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 16579093  T
Q  442 tctcaaca 449  Q
    ||||||||    
T  16579094 tctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 16616684 - 16616279
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616684 tgattctctctttacaacgtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 16616585  T
Q  144 tctctctcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||| ||||||||  || |||||||||||||||||||||| || | |||||  |||||||| ||  |||||||||||||||| || ||||||||||||    
T  16616584 tctctcacttccaactcctctcttcaaatctgcacaagaacaattta-tactacccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacg 16616486  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    || ||||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||    
T  16616485 atctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttt 16616386  T
Q  343 gcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    |||||||| || |||||||||||||||| |  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16616385 gcaccctgcaa-cctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 16616287  T
Q  442 tctcaaca 449  Q
    ||||||||    
T  16616286 tctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 16631415 - 16631010
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16631415 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 16631316  T
Q  144 tctctctcttccaac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||| |||||||| ||  |||||||||||||||||||||| || | |||||| |||||||| ||  |||||||||||||||| || ||||||||||||    
T  16631315 tctctcacttccaactcttctcttcaaatctgcacaagaacaattta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacg 16631217  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    || ||||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||| |||||    
T  16631216 atctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaatttt 16631117  T
Q  343 gcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    |||||||| || |||||||||||||||| |  |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  16631116 gcaccctgtaa-cctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaa 16631018  T
Q  442 tctcaaca 449  Q
    ||||||||    
T  16631017 tctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 6027232 - 6026834
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  6027232 tctctctacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtctctctc 6027133  T
Q  150 tcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 248  Q
    |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6027132 t--tccaacctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgc 6027035  T
Q  249 gtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca-cc 347  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| ||||| |||||| ||    
T  6027034 gtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-tttgcaccc 6026936  T
Q  348 ctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    ||| ||||||||||| | |||||||  ||||||||||| || ||  ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  6026935 ctgcaaccctagctctc-gcacctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaagacaatctca 6026837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 34167064 - 34166666
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  34167064 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccctttgatttcccaagtctctctc 34166965  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    | ||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  34166964 t-ttcaaccctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcg 34166867  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| ||    
T  34166866 tacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcaccc 34166768  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  34166767 ctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaa 34166668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 34164842 - 34164444
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  34164842 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaactctagagcttcccctttgatttcccaagtctctctc 34164743  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    | ||| | ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  34164742 t-ttcaaccctct-cttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtcacgatttgcg 34164645  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||| ||||| |||||| ||    
T  34164644 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacga-tttgcaccc 34164546  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||| |||||||| ||| ||||||| |||||||||||||||||||||  |||||||||||||||||| |||||    
T  34164545 ctgcaaccctaactcacggcatccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaactcaa 34164446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 44 - 341
Target Start/End: Complemental strand, 25421295 - 25421000
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  25421295 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcccctttgatttcccaagtc 25421196  T
Q  144 tctctctcttccaacctctt-cttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  25421195 tctctct--tccaacctctttcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcatgtcacg 25421098  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||    
T  25421097 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcc-caatcatgtcacgattt 25421000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 144 - 449
Target Start/End: Original strand, 6136241 - 6136547
Alignment:
Q  144 tctctctcttccaacctcttct--tcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  6136241 tctctctcttccaacctcttctcttcaaatctgcacaagaa-acttaaatactagtcttcctctgttccaatcgtgtcacgattttcccaattgtgtcac 6136339  T
Q  242 gatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  6136340 gatttgcttccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt 6136439  T
Q  342 tgcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    |   ||||| ||||||||||||||||| |   ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  6136440 tcacccctgcaaccctagctcacggcatccgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaa 6136539  T
Q  442 tctcaaca 449  Q
    ||||||||    
T  6136540 tctcaaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 16653102 - 16652716
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtc 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16653102 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattctccaagtc 16653003  T
Q  144 tctctctcttccaac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    |||||| |||||||| ||  |||||||||||||||||||||| || | |||||| |||||||| ||  |||||||||||||||| || ||||||||||||    
T  16653002 tctctcacttccaactcttctcttcaaatctgcacaagaacaattta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacg 16652904  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    || ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||  ||||| |||    
T  16652903 atctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacgacttt 16652804  T
Q  343 gcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    ||||||| | | ||||||||||||||||                  || |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  16652803 gcaccct-acaacctagctcacggcacc------------------ccgaaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagacaat 16652723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 50 - 441
Target Start/End: Complemental strand, 27647847 - 27647476
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctct 148  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  27647847 tctctctacatggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaagtctctct 27647748  T
Q  149 ctcttccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    |||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||||||| |||||                    |||||||||| ||    
T  27647747 ctcttccaac-tctctcttcaaatctgcacaagaacacttta-tactagtcttcctctattgcaatc--------------------gtgtcacgatctg 27647670  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||| |  |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  27647669 cgtaccacccaagaaacgaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcacc 27647570  T
Q  348 ctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa 441  Q
    ||| || |||||||||||||||| |  |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27647569 ctgcaa-cctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 27647476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 212 - 449
Target Start/End: Complemental strand, 25421034 - 25420797
Alignment:
Q  212 atcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 311  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25421034 atcgtgtcacgattttcccaatcatgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 25420935  T
Q  312 tcacgatttcccacaatcgtgtcacgattttgca-ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttcc 410  Q
    ||||||||| ||  ||||||| ||||| |||||| ||||| ||||||||||||||||| |   |||||||||||| | ||||||| ||| ||||||||||    
T  25420934 tcacgattttcccaaatcgtgccacga-tttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacggtcccaaaattgtgtcacgatttcc 25420836  T
Q  411 ctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25420835 ctgttcttccagaccacaaatttgaagacaatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 412091 - 411685
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||||||||| | |||||||||| | |||||    
T  412091 tgattttctctcttcaaggtgtttcccatgttttcaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttctcaagt 411993  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
     |||||||||||||||  |  |||||||||||||||||||||||||| |||  | ||||| ||  |  |||||||||||||||| ||  || ||||||||    
T  411992 ttctctctcttccaactcc--cttcaaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgattt-cctgattgtgtcacg 411896  T
Q  243 att--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttcccacaatcgtgtcacgat 339  Q
    |||  ||| |||||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  411895 attggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgat 411796  T
Q  340 tttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaaga 438  Q
    || |||||||| |  | |||||||||||||| | || | ||||||| || ||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  411795 ttggcaccctgcagac-tagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaaga 411697  T
Q  439 c-aatctcaaca 449  Q
    | ||||||||||    
T  411696 caaatctcaaca 411685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 44 - 451
Target Start/End: Original strand, 3072938 - 3073345
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaag 141  Q
    ||||| ||||| | ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| | |||||||||| ||||||    
T  3072938 tgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagtttctccctttgatttcccaag 3073036  T
Q  142 tctctctctcttccaac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtca 240  Q
    | |||||||  |||||| ||||||  ||||||||||||||||||||||| |||||| | ||| ||  |  |||||||||||||||| ||  ||||||| |    
T  3073037 tttctctct--tccaactctcttc--caaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattt-ccagatcgtgtaa 3073131  T
Q  241 cgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacga 338  Q
    |||||  ||| ||| |||||||| | ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||| |||||||||||||||    
T  3073132 cgattagtgcatccatcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacga 3073231  T
Q  339 ttttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||| |||||||| |  || ||||||||||| | |  |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  3073232 tttggcaccctgtagacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccacaaatttgaag 3073330  T
Q  438 ac-aatctcaacaga 451  Q
    || ||||||||||||    
T  3073331 acaaatctcaacaga 3073345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 149 - 437
Target Start/End: Complemental strand, 5674530 - 5674242
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacactt-aagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| || ||||||||||||||||||||| || |||||| ||||||||  | ||||||||||||||||| ||  ||||||||||||||||    
T  5674530 ctcttccaagctctcctccaaatctgcacaagaacactttaaatactagccttcctctgatacaatcgtgtcacgattt-ccagatcgtgtcacgatttg 5674432  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||| |||||||||| | ||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||  || |||||||||||| |||||    
T  5674431 cgtacgtcccaaggtatgaccagtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcacc 5674332  T
Q  348 ctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    ||| || || ||||||||||| | |  |||| ||||||||| ||||| || || ||||||||| |||||||||||||||||||||||||||    
T  5674331 ctgcaaacc-agctcacggcatcacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaag 5674242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 229 - 441
Target Start/End: Complemental strand, 13151070 - 13150857
Alignment:
Q  229 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaa 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||    
T  13151070 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaa 13150971  T
Q  328 tcgtgtcacgattttgca-ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagacca 426  Q
    ||||||||||| |||||| ||||| ||||||| ||||||||| |   ||||| |||||||| ||||||||||| |||||||||||||||||||||  |||    
T  13150970 tcgtgtcacga-tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagcca 13150872  T
Q  427 caaatttgaagacaa 441  Q
    |||||||||||||||    
T  13150871 caaatttgaagacaa 13150857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 168 - 449
Target Start/End: Original strand, 22709362 - 22709645
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgc--gtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| |||||||||||| ||| |  |||||||||||||||| || | |||||||||||||||   || |||| ||||| |||    
T  22709362 aaatctgcacaagaacacttaaatactagtcttccactaataaaatcgtgtcacgattt-ccaagtcgtgtcacgatttgtatgtacgtcacaaggtacg 22709460  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    |||||||||||||| ||| ||||||||||||||||| |  |||||||||||||||||||  ||||||||||||||| |||||||| || || |||||| |    
T  22709461 accagtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcatg 22709559  T
Q  366 gcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    ||| | |  |||||||||||| | ||||| ||||| || |||||| ||||||||||||||||||||||||||| | ||||||||||    
T  22709560 gcatcacaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 22709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 58 - 436
Target Start/End: Original strand, 2171730 - 2172090
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||     
T  2171730 caaggtgtttacaatgtttcccaacccaagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttcccaagtttctctctcttct 2171828  T
Q  156 aacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtc 255  Q
    | | ||  |||||||||||||||||||||||||| |||||| ||||| ||  |  |||||||||||||||                    | ||| ||||    
T  2171829 agc-tcaccttcaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt------------------ggtacgtacgtc 2171909  T
Q  256 ccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaacc 355  Q
     ||||| |||||| |||||||||  ||| ||||||||||||||||| || |||||||||||||||||||  ||||||||||||||| |||||||| || |    
T  2171910 acaaggtacgacctgtccttatcttggaaacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac 2172009  T
Q  356 ctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 436  Q
    | ||||||||||| | |  |||||||||||||| ||||| || || | ||||||| ||||||||||||||||||||||||||    
T  2172010 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaa 2172090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 6438899 - 6439083
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| ||||||| |||| || | || | | ||||||    
T  6438899 gaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctcac 6438998  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||| |||| ||||||    
T  6438999 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaatttcaaca 6439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 282 - 449
Target Start/End: Complemental strand, 30125185 - 30125018
Alignment:
Q  282 gatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtg 380  Q
    |||||||||||||||||||||   ||||||||||||||||||| ||||||| |||||||| ||  |||| || | |||||||||||||||| || |||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtg 30125087  T
Q  381 tcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  30125086 tcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30125018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 211 - 449
Target Start/End: Original strand, 11857330 - 11857567
Alignment:
Q  211 aatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 310  Q
    ||||||| |||||||| || ||||||||||||||||||  | | |||||||   ||| |||||||||||  | |||||||||||||||||||   |||||    
T  11857330 aatcgtgccacgatttcccaaatcgtgtcacgatttgcaacggacccaaggtt-gacaagtccttatcagtgttacttaacgagcaagtttctaaatcgt 11857428  T
Q  311 gtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc-acctccaatcgtgtcacgattccaaaatcgtggcacgatttc 409  Q
    ||||||||||||||  |||||| |||||||| ||  |||| || | ||||||||||| || |  |||||||||||||| ||||||||||| |||||||||    
T  11857429 gtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 11857527  T
Q  410 cctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
     ||||||||||||||||||||||||||| |||| ||||||    
T  11857528 tctgttcttccagaccacaaatttgaagccaatatcaaca 11857567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 211 - 442
Target Start/End: Original strand, 16839092 - 16839323
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    |||||||||||||||| || | ||||||||||||| |||  | |||||||||   |||||||||||||||  |||||||||| ||||||||||   ||||    
T  16839092 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagtccttatcagagatacttaaccagcaagtttctgaatcg 16839190  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttc 409  Q
    |||||||||||||||  |||||| |||||||||||  || | || | | |||||||||| |||| |||||||||||||| | |||||| | ||||||| |    
T  16839191 tgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcc 16839290  T
Q  410 cctgttcttccagaccacaaatttgaagacaat 442  Q
     ||||||||||| ||||||||||||||| ||||    
T  16839291 tctgttcttccaaaccacaaatttgaagccaat 16839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 22010427 - 22010189
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||| |||||||| || | |||||||||||||||||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||    
T  22010427 aatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcg 22010329  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc-acctccaatcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  |||||| |||||||| ||  |||| || | || || ||||| || |  |||||||||||||| ||||||||||| ||||||||    
T  22010328 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-taacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 22010230  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  22010229 ctctgttcttccagaccacaaatttgaagccaatatcaaca 22010189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 6097632 - 6097800
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| | |    
T  6097632 caaggtgtttaccatgtttcccaaccaaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctc-tac 6097730  T
Q  156 aacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgatt 225  Q
       |||  |||||||||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||    
T  6097731 tctctcaccttcaaatctgcacaagaacacttaaatactagtcttcccctgataaaatcgtgtcacgatt 6097800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 230 - 388
Target Start/End: Original strand, 5266453 - 5266611
Alignment:
Q  230 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatc 329  Q
    |||||||||||||||||||||||||  ||||| | |||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||  |||    
T  5266453 caatcgtgtcacgatttgcgtccgtttcaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 5266552  T
Q  330 gtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgatt 388  Q
    ||| |||||||| ||  |||| ||  |||||||||||||||||  |||||||||||||||    
T  5266553 gtgccacgatttggcgtcctgcaa-actagctcacggcacctcgaaatcgtgtcacgatt 5266611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 269 - 449
Target Start/End: Complemental strand, 14742106 - 14741926
Alignment:
Q  269 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc- 367  Q
    |||||||||||  |||||||||||||||||||||   ||||||||||||||| |||  |||||| |||||||| ||  |||| || | ||||||||| |     
T  14742106 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacgacc 14742008  T
Q  368 acctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    || |  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  14742007 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14741926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 33330117 - 33329940
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | ||||||    
T  33330117 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33330018  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| |||| |||||||||||||| | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  33330017 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 33335614 - 33335437
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | ||||||    
T  33335614 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33335515  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| |||| |||||||||||||| | |||||| |  |||||| | ||||||||||| ||||||||||||||| ||||    
T  33335514 ggcatctccgatcgtgtcacgattgccaaatcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaat 33335437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 211 - 388
Target Start/End: Complemental strand, 28155309 - 28155132
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    |||||||||||||||| || | ||||||||||||| |||  | ||||| |||   |||||||||||||||  |||||||||| ||||||||||  |||||    
T  28155309 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagtccttatcagagatacttaaccagcaagtttctggatcg 28155211  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaatcgtgtcacgatt 388  Q
    |||||||||||||||  |||||| ||||||||||||||||| || | | |||||||||| |||  ||||||||||||||    
T  28155210 tgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatt 28155132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 6005822 - 6005999
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | | |||||     
T  6005822 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcat 6005921  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| |||| |||||||||||||| | |||||| | ||||||| | ||||| ||||| ||||||||||||||| ||||    
T  6005922 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaat 6005999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 326 - 449
Target Start/End: Original strand, 6097862 - 6097986
Alignment:
Q  326 aatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagac 424  Q
    |||||||||||||||| |||||||| || || ||||||||||| | | || |||||||||||| ||||| ||||| || |||||||||||||||||| ||    
T  6097862 aatcgtgtcacgatttagcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaac 6097960  T
Q  425 cacaaatttgaagac-aatctcaaca 449  Q
    ||||||||||||||| ||||||||||    
T  6097961 cacaaatttgaagacaaatctcaaca 6097986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 5343880 - 5344057
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  ||||||||||||||||||   | |||  | | ||||||    
T  5343880 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagaagacttggctcac 5343979  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
      |  | |  |||||||||||||  | |||||||| ||||||||| ||||||| ||| ||||||||||||||| ||||    
T  5343980 ttcctccctgatcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaat 5344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 346 - 449
Target Start/End: Complemental strand, 34151931 - 34151828
Alignment:
Q  346 ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctc 445  Q
    ||||| ||||||| ||||||||| |   ||||| |||||||| ||| ||||||| |||||||||||||||||||||  |||||||||||||||||| |||    
T  34151931 ccctgcaaccctaactcacggcatccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaactc 34151832  T
Q  446 aaca 449  Q
    ||||    
T  34151831 aaca 34151828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 374 - 451
Target Start/End: Complemental strand, 26253665 - 26253587
Alignment:
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaga 451  Q
    |||| ||||||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  26253665 aatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagacaaatctcaacaga 26253587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 31404873 - 31404970
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||||| ||||||||||| ||||||||||||  ||||||||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  31404873 caaggtgtttacaatgttttccaacccaagaga-actctaatcaaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttc 31404970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 231 - 320
Target Start/End: Original strand, 6097786 - 6097877
Alignment:
Q  231 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 320  Q
    |||||||||||||||  ||||| |||||| ||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||||||||    
T  6097786 aatcgtgtcacgattggtgcgtacgtccccaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 6097877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 14737142 - 14737085
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 374 - 437
Target Start/End: Original strand, 23896881 - 23896944
Alignment:
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||||||||||||| ||||||||||| ||||||||  |||||||| || |||||||||||||||    
T  23896881 aatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 23896944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 5406398 - 5406494
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  5406398 caaggtgtttacaatgtttcccaacccgagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttc 5406494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 5410723 - 5410819
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  5410723 caaggtgtttacaatgtttcccaacccgagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttc 5410819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 14737246 - 14737174
Alignment:
Q  269 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
    |||||||||||  |||||||||||||||||||||   ||||||||||||||| |||  |||||| ||||||||    
T  14737246 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgattt 14737174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 30834738 - 30834865
Alignment:
Q  60 aggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttccaa 157  Q
    |||||||| | |||||| ||||||||||||| |||||||||||||| || ||||||||| ||||||  ||||||||| | ||||| |||||||||| |||    
T  30834738 aggtgtttacaatgtttctcaacccaagaga-actctaatcaaaga-ccataaaccctaaagttgcttcctttgatttctcaagtttctctctctt-caa 30834834  T
Q  158 cctcttcttc-aaatctgcacaagaacactta 188  Q
     |||| |||| ||||||||| |||||||||||    
T  30834835 gctctccttcaaaatctgca-aagaacactta 30834865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 16452529 - 16452625
Alignment:
Q  58 caaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgccc-ctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| ||||||||||||| |||||||||||||| |||||||| ||| ||||||   |||||||| ||||||| |||||||||||    
T  16452529 caaggtgtttacaatgtttctcaacccaagaga-actctaatcaaaga-ccctaaactctaaagttgcttactttgatttcccaagtttctctctcttc 16452625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 5413613 - 5413688
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||| |||||    
T  5413613 caacccgagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaagtttctctatcttc 5413688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 211 - 320
Target Start/End: Complemental strand, 26253808 - 26253698
Alignment:
Q  211 aatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 308  Q
    ||||||| |||||||| || |||||||||||||||  | ||| |||| ||| | ||||||||||||||||  | | ||||||| ||||||||| |  |||    
T  26253808 aatcgtgccacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaagtacgaccagtccttatcctgaaaacttaaccagcaagtttgaaaatc 26253710  T
Q  309 gtgtcacgattt 320  Q
    ||||||||||||    
T  26253709 gtgtcacgattt 26253698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 5017026 - 5016976
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||  ||||||||||| ||||||||||||||| ||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 5266615 - 5266653
Alignment:
Q  411 ctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  5266615 ctgttcttccagaccacaaatttgaagccaatatcaaca 5266653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 9183231 - 9183327
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | |||||| |||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  9183231 caaggtgtttacaatgtttcccaacccaggaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 9183327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 31086003 - 31085953
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||| | ||||||||||||||| ||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 33160553 - 33160652
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaag-tctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| | || ||||||| |||| || |||||||||||||||| | |||||||||||    
T  33160553 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ctctcaaccctaaagttacctcctttgattccccaagttttctctctcttc 33160650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 33211385 - 33211514
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| |||  || |||| || ||||||||| ||||||| |||||||||| |    
T  33211385 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaactgtaaagttacctcctttgatttcccaagtttctctctctt-c 33211481  T
Q  156 aacctcttcttca-aatctgcacaagaacactta 188  Q
    ||| ||| ||||| |||||||| |||||||||||    
T  33211482 aacttctccttcacaatctgca-aagaacactta 33211514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 50 - 449
Target Start/End: Original strand, 42575508 - 42575909
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||    
T  42575508 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctttccctttgatttcccaagtctctctc 42575607  T
Q  150 tcttccaac--ctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgattt 246  Q
    |  ||||||  |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  42575608 t--tccaactcctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgattt 42575705  T
Q  247 gcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca 345  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||| ||||| ||||||    
T  42575706 gcgtccgtcccaaggaaagaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacga-tttgca 42575804  T
Q  346 -ccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatct 444  Q
     ||||| ||||||| ||||||||| |   ||||||||| |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  42575805 cccctgcaaccctaactcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatct 42575904  T
Q  445 caaca 449  Q
    |||||    
T  42575905 caaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 3439494 - 3439088
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | |||||    
T  3439494 tgattttctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttctcaagt 3439395  T
Q  143 ctctctctct--tccaacctct-tcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtc 239  Q
    ||||||||||  |||||| ||| ||||||||||||||||||||||||| | ||||||||||||||| ||  ||||||||||||||||||||||||||| |    
T  3439394 ctctctctctcttccaac-tctctcttcaaatctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgattttcccaatcgtgcc 3439297  T
Q  240 acgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgat 339  Q
    ||||| ||||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3439296 acgatatgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgat 3439198  T
Q  340 tttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaaga 438  Q
    ||||||||||| || |||||||||||||||| |  |||||||||||||| ||| ||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  3439197 tttgcaccctgcaa-cctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaga 3439099  T
Q  439 caatctcaaca 449  Q
    |||||||||||    
T  3439098 caatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 44 - 388
Target Start/End: Complemental strand, 25689945 - 25689603
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||| |||||||    
T  25689945 tgattctctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttctccctttgatttcccaagt 25689846  T
Q  143 ctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    ||||||||  ||||||||||||||||||  ||||||||||||||||| |||||| |||||||| || ||||||||||||||||||| |||||||||||||    
T  25689845 ctctctct--tccaacctcttcttcaaagatgcacaagaacacttaaatactagccttcctctgttgcaatcgtgtcacgattttctcaatcgtgtcacg 25689748  T
Q  243 atttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatttt 342  Q
    ||||| || |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  25689747 atttgtgtacaaaccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgatttt 25689648  T
Q  343 gcaccctgaaaccctagctcacggcacctccaatcgtgtcacgatt 388  Q
    |||||||| || ||||||||||||||||   |||||||||||||||    
T  25689647 gcaccctgcaa-cctagctcacggcacccgaaatcgtgtcacgatt 25689603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 15290508 - 15290143
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||    
T  15290508 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctttccctttgatttcccaagtctctctc 15290409  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    |               |||||||||||||||||||||||||||||||||||||||| |||||||                    ||||||||||||||||    
T  15290408 t---------------tcaaatctgcacaagaacacttaagtactagtcttcctctgttccaat--------------------cgtgtcacgatttgcg 15290344  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| ||    
T  15290343 tccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcaccc 15290245  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||||||| | || ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  15290244 ctgcaaccctaactcacggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaa 15290145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 50 - 449
Target Start/End: Complemental strand, 15470877 - 15470512
Alignment:
Q  50 tctctttacaaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcccctttgattccccaagtctctctc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||    
T  15470877 tctctctacaaggtgtttcccatgttttcaacccaagaggtactctaatcaaagaaccctaaaccctagagctttccctttgatttcccaagtctctctc 15470778  T
Q  150 tcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 249  Q
    |               |||||||||||||||||||||||||||||||||||||||| |||||||                    ||||||||||||||||    
T  15470777 t---------------tcaaatctgcacaagaacacttaagtactagtcttcctctgttccaat--------------------cgtgtcacgatttgcg 15470713  T
Q  250 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccacaatcgtgtcacgattttgca-cc 347  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| ||    
T  15470712 tccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcaccc 15470614  T
Q  348 ctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaa 447  Q
    ||| ||||||| ||||||||| |   ||||||||| | || ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  15470613 ctgcaaccctaactcacggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaa 15470514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 44 - 449
Target Start/End: Complemental strand, 2627725 - 2627318
Alignment:
Q  44 tgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaag 141  Q
    ||||| ||||| | ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| | |||||||||| ||||||    
T  2627725 tgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaaga-ctctaaaccctagagttactccctttgatttcccaag 2627627  T
Q  142 tctctctctcttccaacctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcac 241  Q
    | ||||||||||||||| ||| |||||||||||||||||||||||||| |||||| | |||     |  |||||||||||||||| |  | |||||||||    
T  2627626 tttctctctcttccaac-tctccttcaaatctgcacaagaacacttaaatactagccctccaacgataaaatcgtgtcacgatttacaga-tcgtgtcac 2627529  T
Q  242 gatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgat 339  Q
     | |  ||||| |||| |||| |||||||| ||||||||| ||| |||||||||||||||||    ||||||||||||||||||| ||||||||||||||    
T  2627528 aaatggtgcgtacgtcacaagaaacgaccaatccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgat 2627429  T
Q  340 tttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaaga 438  Q
    || ||||| || || || ||||||||| | | |  |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||     
T  2627428 ttggcaccatgcaaacc-agctcacggaatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 2627330  T
Q  439 c-aatctcaaca 449  Q
    | ||||||||||    
T  2627329 caaatctcaaca 2627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 149 - 449
Target Start/End: Complemental strand, 4759834 - 4759534
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| |||||||   ||||||||||||  ||  |||||||||||||||     |||||||||||||||| ||  ||||||||||||||||    
T  4759834 ctcttccaagctctccttcaaacaagcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt-ccagatcgtgtcacgatttg 4759736  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |    
T  4759735 cgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtc 4759636  T
Q  348 ctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    ||| ||  |||||||||||||||||  ||||||||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||    
T  4759635 ctgcaa-actagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 4759537  T
Q  447 aca 449  Q
    |||    
T  4759536 aca 4759534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 230 - 449
Target Start/End: Complemental strand, 33037506 - 33037287
Alignment:
Q  230 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatc 329  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||| |||||||||||   |||||||||||||||||||  |||    
T  33037506 caatcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 33037407  T
Q  330 gtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccaca 428  Q
    |||||||||||| ||  |||| ||  |||||||||||||||||  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  33037406 gtgtcacgatttggcgtcctgcaa-actagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccaca 33037308  T
Q  429 aatttgaagacaatctcaaca 449  Q
    ||||||||| |||| ||||||    
T  33037307 aatttgaagccaatatcaaca 33037287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 175 - 450
Target Start/End: Original strand, 36979741 - 36980015
Alignment:
Q  175 cacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtcct 274  Q
    ||||||||||||||| |||||| ||||||||    |||||||| |||||||| ||  ||||||||||||||||||| |  ||||||| | ||||||||||    
T  36979741 cacaagaacacttaaatactagccttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtcct 36979839  T
Q  275 tatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctcca 374  Q
    |||||  |||||||||||||||||||||   ||||||||||||||| |||  |||||| |||||||| ||  |||| || | |||||||||||||||| |    
T  36979840 tatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcga 36979938  T
Q  375 a-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 450  Q
    | |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  36979939 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 36980015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 191 - 449
Target Start/End: Original strand, 30656025 - 30656282
Alignment:
Q  191 tactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaa 290  Q
    |||||||||||||||    |||||||| |||||||| ||  |||||||||||||||||||| | |||||||   ||||||||||||||||||||||||||    
T  30656025 tactagtcttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaa 30656123  T
Q  291 cgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacc-tccaatcgtgtcacgattc 389  Q
    ||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| ||  ||||||||||||||| |  |||||||||||||| |    
T  30656124 cgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa-actagctcacggcaccttgaaatcgtgtcacgatgc 30656222  T
Q  390 caaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  30656223 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30656282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 149 - 451
Target Start/End: Complemental strand, 18852927 - 18852625
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| |||||||   ||||||||||||  ||  |||||||||||||||    |||||||| |||||||| || |||||||||||||| ||    
T  18852927 ctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagtcttcctctgaagcaatcgtgccacgattt-ccaaatcgtgtcacgatctg 18852829  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    |||| | ||||||| | |||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |    
T  18852828 cgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtc 18852729  T
Q  348 ctgaaaccctagctcacggcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    ||| ||  ||||||||||||||| |  |||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||| |||| |||    
T  18852728 ctgcaa-actagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaatttgaagccaatatca 18852630  T
Q  447 acaga 451  Q
    |||||    
T  18852629 acaga 18852625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 149 - 436
Target Start/End: Complemental strand, 1261717 - 1261428
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacactt-aagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| |||||||   |||||||||||||| || |||||| ||||||||  |  |||||||||||||||| ||  ||||||||||||||||    
T  1261717 ctcttccaagctctccttcaaaaaagcacaagaacactttaaatactagccttcctctgataaaatcgtgtcacgattt-ccagatcgtgtcacgatttg 1261619  T
Q  248 --cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgca 345  Q
      |||  ||||||||| | ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||  ||||||||||||||| |||    
T  1261618 aacgtatgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggca 1261519  T
Q  346 ccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 436  Q
    ||||| ||  ||||||||||||| | |  |||||||||||||| ||||| ||||| | |||||||  |||||||||| ||||||||||||||    
T  1261518 ccctgcaa-actagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaa 1261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 265 - 450
Target Start/End: Complemental strand, 39784509 - 39784324
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| | ||||||||   |||||||||||||||||||  |||||| |||||||||||| || | || | | ||||||    
T  39784509 gaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 39784410  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 450  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  39784409 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacag 39784324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 149 - 449
Target Start/End: Complemental strand, 18870321 - 18870021
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg 247  Q
    ||||||||| |||| |||||||   ||||||||||||  ||  |||||||||| ||||    |||||||| ||||||||||  |||||||||||||| ||    
T  18870321 ctcttccaagctctccttcaaaaaagcacaagaacacaatatatactagtctttctctgaagcaatcgtgccacgattttca-aatcgtgtcacgatctg 18870223  T
Q  248 cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcacc 347  Q
    |||| | ||||||| | ||||||||||||| |  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |    
T  18870222 cgtctgacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtc 18870123  T
Q  348 ctgaaaccctagctcacggca-cctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctca 446  Q
    ||| ||  |||||||||| || | |  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||    
T  18870122 ctgcaa-actagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 18870024  T
Q  447 aca 449  Q
    |||    
T  18870023 aca 18870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 168 - 449
Target Start/End: Original strand, 26288234 - 26288517
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| |||||| ||||| ||  |  |||||||||||||||| ||   ||||| ||| ||| |  ||| |||| ||||| |||    
T  26288234 aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt-ccaggtcgtgacactattggaacgtacgtcacaaggtacg 26288332  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    |||||||||||||| ||| ||||||||||||||||| |  || ||||||||||||||||  || |||||||||||| |||||||| || || ||||||||    
T  26288333 accagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc-agctcacg 26288431  T
Q  366 gcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa-tctcaaca 449  Q
    ||| | |  |||| ||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  26288432 gcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaaca 26288517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 168 - 449
Target Start/End: Original strand, 26301491 - 26301774
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| |||||| ||||| ||  |  |||||||||||||||| ||   ||||| ||| ||| |  ||| |||| ||||| |||    
T  26301491 aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt-ccaggtcgtgacactattggaacgtacgtcacaaggtacg 26301589  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    |||||||||||||| ||| ||||||||||||||||| |  || ||||||||||||||||  || |||||||||||| |||||||| || || ||||||||    
T  26301590 accagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc-agctcacg 26301688  T
Q  366 gcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa-tctcaaca 449  Q
    ||| | |  |||| ||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  26301689 gcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaaca 26301774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 168 - 449
Target Start/End: Original strand, 26313485 - 26313768
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacg 265  Q
    |||||||||||||||||||||| |||||| ||||| ||  |  |||||||||||||||| ||   ||||| ||| ||| |  ||| |||| ||||| |||    
T  26313485 aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt-ccaggtcgtgacactattggaacgtacgtcacaaggtacg 26313583  T
Q  266 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacg 365  Q
    |||||||||||||| ||| ||||||||||||||||| |  || ||||||||||||||||  || |||||||||||| |||||||| || || ||||||||    
T  26313584 accagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc-agctcacg 26313682  T
Q  366 gcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaa-tctcaaca 449  Q
    ||| | |  |||| ||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  26313683 gcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaaca 26313768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 265 - 451
Target Start/End: Complemental strand, 10683923 - 10683737
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||| || | ||||||||    
T  10683923 gaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 10683825  T
Q  365 ggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaga 451  Q
    |||||||  || |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  10683824 ggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaga 10683737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 211 - 450
Target Start/End: Complemental strand, 7289666 - 7289426
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||| |||||||| || | ||||||||||||||||| || |  |||||| | ||| ||||||||||| ||||||||||||||||||||||   ||||    
T  7289666 aatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgatccaaggta-gacaagtccttatcagggatacttaacgagcaagtttctgaatcg 7289568  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacc--tccaatcgtgtcacgattccaaaatcgtggcacgatt 407  Q
    ||||||||||| |||  ||||||||||||||| ||  |||| || | ||||||| ||| ||  |  |||||||||||||| ||||||||||| ||| |||    
T  7289567 tgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaac-tagctcatggctcccttgaaatcgtgtcacgatgccaaaatcgtgtcactatt 7289469  T
Q  408 tccctgttcttccagaccacaaatttgaagacaatctcaacag 450  Q
    || ||||||||||||||||||||||||||| |||| |||||||    
T  7289468 tctctgttcttccagaccacaaatttgaagtcaatatcaacag 7289426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 230 - 442
Target Start/End: Original strand, 6311717 - 6311928
Alignment:
Q  230 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatc 329  Q
    ||||||||||||||||||| || | |||||||   ||| ||||||||| |  |||||||||||||||||||||   |||||||||||||||||||  |||    
T  6311717 caatcgtgtcacgatttgcatctgacccaaggtt-gacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 6311815  T
Q  330 gtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccaca 428  Q
    ||| |||||||| ||  |||| || | |||||||||||||||  || |||||||||||| ||||||||||| || |||||| ||||||||||||||||||    
T  6311816 gtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccaca 6311914  T
Q  429 aatttgaagacaat 442  Q
    ||||||||| ||||    
T  6311915 aatttgaagccaat 6311928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 265 - 442
Target Start/End: Original strand, 35745794 - 35745971
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  ||   || | | ||||||    
T  35745794 gaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctcac 35745893  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||| |||| |||||||||||||| | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||    
T  35745894 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 35745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 269 - 449
Target Start/End: Complemental strand, 25327844 - 25327664
Alignment:
Q  269 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc- 367  Q
    |||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||| || ||||| ||  |||| || | |||||||| ||     
T  25327844 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaac-tagctcacagcc 25327746  T
Q  368 acctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    || |  ||||||| |||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  25327745 acttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 25327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 326 - 451
Target Start/End: Complemental strand, 31043032 - 31042906
Alignment:
Q  326 aatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagac 424  Q
    |||||||||||||||| |||||||| || || ||||||||||||| | || |||||||||||| ||||| ||||| ||||||||| || |||||||||||    
T  31043032 aatcgtgtcacgatttggcaccctgcaaacc-agctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagac 31042934  T
Q  425 cacaaatttgaagac-aatctcaacaga 451  Q
    ||||||||||||| | ||||||||||||    
T  31042933 cacaaatttgaagtcaaatctcaacaga 31042906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 149 - 388
Target Start/End: Complemental strand, 10688900 - 10688660
Alignment:
Q  149 ctcttccaacctcttcttcaaatctgcacaagaacact-taagtactagtcttcctctattccaatcgtgtcacgattttcc-caatcgtgtcacgattt 246  Q
    ||||||||| ||||  |||||| ||||||||||||||  ||  |||||||||||||||     ||| ||| |||||||| || |||||||||||||||||    
T  10688900 ctcttccaagctctctttcaaaactgcacaagaacacaatatatactagtcttcctctgaagaaattgtgccacgatttcccacaatcgtgtcacgattt 10688801  T
Q  247 gcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcac 346  Q
    || || | |||||||   ||| ||||||||| |  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||      
T  10688800 gcatctgacccaaggtt-gacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgt 10688702  T
Q  347 cctgaaaccctagctcacggcacc-tccaatcgtgtcacgatt 388  Q
    |||| ||  ||||||||||||||| |  |||||||||||||||    
T  10688701 cctgcaa-actagctcacggcaccttgaaatcgtgtcacgatt 10688660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 285 - 437
Target Start/End: Original strand, 7412787 - 7412939
Alignment:
Q  285 acttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctcc-aatcgtgtca 383  Q
    ||||||| ||||||||| |  |||||||||||||||| || ||| ||  ||||||||  ||||||| || || |||||||||||   |  ||||||||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaacc-agctcacggcattacagaatcgtgtca 7412885  T
Q  384 cgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  7412886 cgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 7412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 25689618 - 25689561
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaaca 25689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 34254529 - 34254657
Alignment:
Q  58 caaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcca 156  Q
    |||||||||| | |||| | |||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||| ||    
T  34254529 caaggtgtttacaatgtctccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaagtttctctctctt-ca 34254625  T
Q  157 acctcttcttc-aaatctgcacaagaacactta 188  Q
    | |||| |||| ||||||||| |||||||||||    
T  34254626 agctctccttcaaaatctgca-aagaacactta 34254657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 31218225 - 31218114
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||| |    
T  31218225 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctctt-c 31218129  T
Q  156 aacctcttcttcaaa 170  Q
    || ||||||||||||    
T  31218128 aagctcttcttcaaa 31218114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 10688675 - 10688618
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 17982621 - 17982492
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||| |    
T  17982621 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctctt-c 17982525  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    || |||| |||| ||||||||| |||||||||||    
T  17982524 aagctctccttcaaaatctgca-aagaacactta 17982492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 34256705 - 34256833
Alignment:
Q  58 caaggtgtttcccatgttttcaacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcca 156  Q
    |||||||||| | |||||| |||||||||| | |||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | ||| |||| ||    
T  34256705 caaggtgtttacaatgtttccaacccaagata-actctaatcaaaga-ccctaaaccctaaagttgcctcctttgatttcccaagtttatctttctt-ca 34256801  T
Q  157 acctcttcttc-aaatctgcacaagaacactta 188  Q
    | |||| |||| ||||||||| |||||||||||    
T  34256802 agctctccttcaaaatctgca-aagaacactta 34256833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 320
Target Start/End: Complemental strand, 31043125 - 31043017
Alignment:
Q  213 tcgtgtcacgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 310  Q
    |||||||||||||| || | ||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| |  |||||    
T  31043125 tcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgt 31043027  T
Q  311 gtcacgattt 320  Q
    ||||||||||    
T  31043026 gtcacgattt 31043017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 31043189 - 31043112
Alignment:
Q  168 aaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgattt 246  Q
    |||||||||||||||||||||| |||||||||||| ||  |  ||||||||||||| ||||| | ||||||||||||||    
T  31043189 aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacga-tttccaagtcgtgtcacgattt 31043112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 1746418 - 1746547
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | |||| |||||| ||||||||||| || |||||||||||| ||||||  ||||||||| ||||||| ||||||||||||    
T  1746418 caaggtgtttacaatgtttcccaaccaaagaga-actctaatcaagga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcc 1746515  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
     | ||||||||| ||||||||| |||||||||||    
T  1746516 -agctcttcttcaaaatctgca-aagaacactta 1746547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 43036391 - 43036262
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||| |    
T  43036391 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt-c 43036295  T
Q  156 aacctcttcttc-aaatctgcacaagaacactta 188  Q
    |||||||  ||| ||||||||| |||||||||||    
T  43036294 aacctctcattcaaaatctgca-aagaacactta 43036262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 5702009 - 5701959
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 30143289 - 30143214
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  30143289 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 30143214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 156
Target Start/End: Complemental strand, 33352118 - 33352020
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgccc-ctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| ||  |||||||| ||||||| ||||||||||||    
T  33352118 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttaccttctttgatttcccaagtttctctctcttcc 33352021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 19948554 - 19948650
Alignment:
Q  91 actctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttccaacctcttcttc-aaatctgcacaagaacactta 188  Q
    |||||||||||||| | |||||||||| ||||||  ||||||||| ||||||| |||||||||| ||| |||| |||| ||||||||| |||||||||||    
T  19948554 actctaatcaaaga-ctctaaaccctaaagttgcttcctttgatttcccaagtttctctctctt-caagctctccttcaaaatctgca-aagaacactta 19948650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 1746666 - 1746700
Alignment:
Q  306 atcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    ||||||||||||||||||| |||||||||||||||    
T  1746666 atcgtgtcacgatttcccaaaatcgtgtcacgatt 1746700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 12702838 - 12702934
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| | || || ||||||||| ||||||| |||||||||||    
T  12702838 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaatttacctcctttgatttcccaagtttctctctcttc 12702934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 15212754 - 15212658
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcccc-tttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || | ||||||| ||||||| |||||||||||    
T  15212754 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcatttgatttcccaagtttctctctcttc 15212658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 34256952 - 34256986
Alignment:
Q  306 atcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    ||||||||||||||||||| |||||||||||||||    
T  34256952 atcgtgtcacgatttcccaaaatcgtgtcacgatt 34256986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 44303822 - 44303726
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| |||||   ||||||||| | ||||| |||||||||||    
T  44303822 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgtttcctttgatttctcaagtttctctctcttc 44303726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 4456575 - 4456620
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||||||| |||||||||  |||||||||| |||||||||||||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaag 4456620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 42498141 - 42498066
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||||||||| ||| |||||||||| |||| ||||||| |||| || ||||||||| ||||||| |||||||||||    
T  42498141 caacccaagaga-actttaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 42498066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 149; Significance: 3e-78; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 58 - 449
Target Start/End: Original strand, 11361 - 11753
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttcc 155  Q
    |||||||||| | |||||| | |||||||||||  ||||||||||||| || |||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  11361 caaggtgtttacaatgtttcccaacccaagagaagctctaatcaaaga-ccataaaccctagagttactccctttgatttcccaagtttctctctcttcc 11459  T
Q  156 aac-ctcttcttcaaatctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtcc 252  Q
    ||| ||||||   |||||||||||||||||||||| |||||| ||||| ||  |  |||||||||||||||| ||  ||||||||||||||  ||||| |    
T  11460 aactctcttca--aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt-ccagatcgtgtcacgattggtgcgtac 11556  T
Q  253 gtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaa 352  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||| |||||||||||||||| |||||||| |    
T  11557 gtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca-aatcgtgtcacgatttggcaccctgca 11655  T
Q  353 accctagctcacggcacc-tccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    | || ||||||||||| | |  |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||| ||||||| | ||||||||||    
T  11656 aacc-agctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaaatctcaaca 11753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 78 - 449
Target Start/End: Original strand, 8956 - 9308
Alignment:
Q  78 caacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttccaac-ctcttcttcaaatctgc 175  Q
    ||||||||||||  ||||||||||||| ||||||| ||||||||| | |||||||||| ||||||| ||||||||||||||| ||||||   ||||||||    
T  8956 caacccaagagaagctctaatcaaaga-ccctaaagcctagagttactccctttgatttcccaagtttctctctcttccaactctcttca--aaatctgc 9052  T
Q  176 acaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtcctt 275  Q
    |||||||||||||| |||||| ||||| ||  |  |||||||||||||||                    ||||| |||||||||| |||||||||||||    
T  9053 acaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt------------------ggtgcgtacgtcccaaggtacgaccagtcctt 9134  T
Q  276 atcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-ca 374  Q
    |||| ||| |||||||||||||||||    ||||||||||||||||||| |||| ||||||||||| |||||||| || || ||||||||||| | |  |    
T  9135 atcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca-aatcatgtcacgatttggcaccctgcaaacc-agctcacggcatcacgaa 9232  T
Q  375 atcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    ||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  9233 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 9308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 105; Significance: 5e-52; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 761 - 945
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||| || | || | | ||||||    
T  761 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 860  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  861 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaatttcaaca 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 84 - 436
Target Start/End: Complemental strand, 22286 - 21953
Alignment:
Q  84 aagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgattccccaagtctctctctcttccaacctcttcttcaaatctgcacaagaa 182  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||| | | ||  |||||||||||||||||||    
T  22286 aagagaaactctaatcaaaga-ccctaaaccctagagttgctccctttgatttcccaagtttctctctcttctagc-tcaccttcaaatctgcacaagaa 22189  T
Q  183 cacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaagg 282  Q
    ||||||| |||||| ||||| ||  |  |||||||||||||||                    | ||| |||| ||||| |||||| ||||||||||  |    
T  22188 cacttaaatactagccttccactgataaaatcgtgtcacgatt------------------ggtacgtacgtcacaaggtacgacctgtccttatcagtg 22107  T
Q  283 atacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgt 381  Q
    ||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||| ||  |||| ||  |||||||||||||||||  ||||||||    
T  22106 atacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaa-actagctcacggcacctcgaaatcgtgt 22008  T
Q  382 cacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 436  Q
    |||||| ||||| || || | ||||||| ||||||||||||||||||||||||||    
T  22007 cacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaa 21953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 100; Significance: 4e-49; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 231 - 449
Target Start/End: Complemental strand, 17652 - 17431
Alignment:
Q  231 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaat 328  Q
    ||||||||||||||| |  ||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||| |  ||| |||||||||||||||  ||    
T  17652 aatcgtgtcacgattggaacgtacgtcacaaggtacgaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagat 17553  T
Q  329 cgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccac 427  Q
    ||||||||||||| |||||||| || || ||||||||||| | |  |||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||    
T  17552 cgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccac 17454  T
Q  428 aaatttgaagac-aatctcaaca 449  Q
    |||||||||| | ||||||||||    
T  17453 aaatttgaagccaaatctcaaca 17431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 17715 - 17661
Alignment:
Q  149 ctcttccaacctcttcttcaaa-tctgcacaagaacacttaagtactagtcttcc 202  Q
    ||||||||| |||| ||||||| ||||||||||||||||||| |||||| |||||    
T  17715 ctcttccaagctctccttcaaaatctgcacaagaacacttaaatactagccttcc 17661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 58 - 409
Target Start/End: Complemental strand, 885 - 523
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc- 154  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||||     
T  885 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgctgcctttgatttcccaagtttctctctcttct 788  T
Q  155 --------caacctcttcttcaaa-tctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacgatt 245  Q
            ||| |||| || |||| ||||||||||||||||||| |||||||||||| ||  |  |||||||||||||||| || ||||||||||| |||    
T  787 agctcatccaagctctcctccaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt-ccaaatcgtgtcacaatt 689  T
Q  246 tg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttg 343  Q
     |  ||| |||| ||||| ||||||||||| ||||  ||| ||||||||||||| ||| |  |||||||||||||| | ||  ||||||||||||||| |    
T  688 ggtacgtacgtcacaaggtacgaccagtccctatcctggaaacttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttgg 589  T
Q  344 caccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttc 409  Q
    ||||||| ||  ||||||||||||| | |  |||||||||||||| ||||| ||||| |||||||||    
T  588 caccctgcaa-actagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 3575 - 3337
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    ||||||||||||||||||| | ||||||||||||| |||  | ||||| |||   ||| |||||||||||  |||||||||||||||||||||   ||||    
T  3575 aatcgtgtcacgattttcctagatcgtgtcacgatctgcaacggtccccaggtt-gactagtccttatcattgatacttaacgagcaagtttctgaatcg 3477  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggc-acctccaatcgtgtcacgattccaaaatcgtggcacgattt 408  Q
    |||||||||||||||  |||||| |||||||| ||  |||  || | ||||||||||| || |  ||||||||||||||  |||||||||| ||||||||    
T  3476 tgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaac-tagctcacggccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgattt 3378  T
Q  409 ccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    | || |||||||||||||||||||||||| |||| ||||||    
T  3377 ctcttttcttccagaccacaaatttgaagccaatatcaaca 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 232 - 442
Target Start/End: Complemental strand, 18880 - 18671
Alignment:
Q  232 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgt 331  Q
    |||||||||||||||||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||    
T  18880 atcgtgtcacgatttgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgt 18782  T
Q  332 gtcacgattttgcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaat 431  Q
    | |||||||||||  || | || | |||||||| ||  |||| |||||||||||||| | |||||| | ||||||| | ||||||| ||| |||||||||    
T  18781 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttctcccaaaccacaaat 18682  T
Q  432 ttgaagacaat 442  Q
    |||||| ||||    
T  18681 ttgaagccaat 18671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 265 - 442
Target Start/End: Complemental strand, 13968 - 13791
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | ||||||||    
T  13968 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 13869  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
     ||  | |  |||||||||||| | |||||||||| ||||||| | ||||||| ||| ||||| ||||||||| ||||    
T  13868 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 13791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 211 - 442
Target Start/End: Complemental strand, 1977 - 1746
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    |||||||||||||||| || | ||||||||||||| |||  | |||||||||   |||||||||||||||  || ||||||| ||||||||||   ||||    
T  1977 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagtccttatcagagaaacttaaccagcaagtttctgaatcg 1879  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttc 409  Q
    |||||||||||||||  |||||| |||||||||||  || | || | | |||||| ||  | || |||||||||||||| | |||||||| ||||||| |    
T  1878 tgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcc 1779  T
Q  410 cctgttcttccagaccacaaatttgaagacaat 442  Q
     ||||||||||| ||||| ||||||||| ||||    
T  1778 tctgttcttccaaaccactaatttgaagtcaat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 232 - 451
Target Start/End: Complemental strand, 34770 - 34552
Alignment:
Q  232 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgt 331  Q
    ||||||||||||| |||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||||    
T  34770 atcgtgtcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 34672  T
Q  332 gtcacgattttgcaccctgaaaccctagctcacggc-acctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaa 430  Q
    | |||||||| ||  | || || |  | || ||||| || |  ||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  34671 gccacgatttggcgtcatgcaaacaaa-ctaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaa 34573  T
Q  431 tttgaagacaatctcaacaga 451  Q
    ||||||| |||| ||||||||    
T  34572 tttgaagccaatatcaacaga 34552  T

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Target: scaffold0028 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 211 - 442
Target Start/End: Complemental strand, 148682 - 148451
Alignment:
Q  211 aatcgtgtcacgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 309  Q
    |||||||||||||||| || | ||||||||||||| |||  | |||||||||   |||||||||||||||  || ||||||| ||||||||||   ||||    
T  148682 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagtccttatcagagaaacttaaccagcaagtttctgaatcg 148584  T
Q  310 tgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttc 409  Q
    |||||||||||||||  |||||| |||||||||||  || | || | | |||||| ||  | || |||||||||||||| | |||||||| ||||||| |    
T  148583 tgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcc 148484  T
Q  410 cctgttcttccagaccacaaatttgaagacaat 442  Q
     ||||||||||| ||||| ||||||||| ||||    
T  148483 tctgttcttccaaaccactaatttgaagtcaat 148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 374 - 449
Target Start/End: Complemental strand, 1784 - 1709
Alignment:
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 265 - 451
Target Start/End: Complemental strand, 176634 - 176448
Alignment:
Q  265 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcac 364  Q
    |||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || | || | ||||||||    
T  176634 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 176535  T
Q  365 ggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaga 451  Q
     ||  | |  |||||||||||| | |||||||||| ||||||| | ||||||| ||| ||||| ||||||||| ||||  |||||||    
T  176534 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaataccaacaga 176448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 56; Significance: 8e-23; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 211 - 449
Target Start/End: Complemental strand, 132991 - 132752
Alignment:
Q  211 aatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 308  Q
    ||||||| |||| |||||| |||||||||||||||  | ||| || ||||||| |||||||  |||||||  | | ||||||| ||||||||| |  |||    
T  132991 aatcgtgccacg-ttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatc 132894  T
Q  309 gtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatt 407  Q
     |||||||||| | || ||||||||||||||||  ||| ||| || || |||||||| || | | || ||||| |||||| ||| ||||||| |||||||    
T  132893 atgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaacc-agctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatt 132795  T
Q  408 tccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    || ||||||||||| ||||||||||||||||| ||||||||||    
T  132794 tctctgttcttccaaaccacaaatttgaagacaaatctcaaca 132752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 6252 - 6302
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 340
Target Start/End: Original strand, 2811 - 3008
Alignment:
Q  144 tctctctcttccaacctcttcttcaaa-tctgcacaagaacacttaagtactagtcttcctctattccaatcgtgtcacgattttcccaatcgtgtcacg 242  Q
    ||||||||||| || |||| ||||||| ||||||||||||||||||  ||  |||||||  || ||  |||||||||||| || ||| ||||||| ||||    
T  2811 tctctctcttc-aagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacg 2909  T
Q  243 att--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    |||  ||||| || ||||||| |||||||  |||||||  | | || || | ||||||||| |  |||| |||||| ||||||| ||||||| |||||||    
T  2910 attggtgcgtacgacccaaggtacgacca-accttatcctgaaaacatacccagcaagtttgaaaatcgggtcacgttttcccaaaatcgtgacacgatt 3008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 3060 - 3110
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 442  Q
    |||||||| || |||||| ||||||||||| ||||||||||||||| ||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 326 - 449
Target Start/End: Complemental strand, 8035 - 7911
Alignment:
Q  326 aatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagac 424  Q
    |||||||||||||||| |||||||| || || | ||||||||| | |  |||||||||||||| ||||| ||||| ||||||||| |||||||| |||||    
T  8035 aatcgtgtcacgatttggcaccctgcaaacc-aactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagac 7937  T
Q  425 cacaaatttgaagac-aatctcaaca 449  Q
    ||||||||||||| | ||||||||||    
T  7936 cacaaatttgaagccaaatctcaaca 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 434501 - 434405
Alignment:
Q  58 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgattccccaagtctctctctcttc 154  Q
    |||||| ||| |||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||| ||||||| |||||||||||    
T  434501 caaggtatttaccatgttttccaacccaagaga-actctaatcaaaga-ccctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 340
Target Start/End: Complemental strand, 434252 - 434218
Alignment:
Q  306 atcgtgtcacgatttcccacaatcgtgtcacgatt 340  Q
    ||||||||||||||||||| |||||||||||||||    
T  434252 atcgtgtcacgatttcccaaaatcgtgtcacgatt 434218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 449
Target Start/End: Original strand, 8216 - 8273
Alignment:
Q  392 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 449  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 8112 - 8184
Alignment:
Q  269 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattt 341  Q
    |||||||||||  |||||||||||||||||||||   ||||||||||||||| |||  |||||| ||||||||    
T  8112 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgattt 8184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 374 - 437
Target Start/End: Complemental strand, 1159 - 1096
Alignment:
Q  374 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||||||||||||| ||||||||||| ||||||||  |||||||| || |||||||||||||||    
T  1159 aatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 1096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 285 - 437
Target Start/End: Complemental strand, 43599 - 43447
Alignment:
Q  285 acttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgtcacgattttgcaccctgaaaccctagctcacggcacctccaa-tcgtgtca 383  Q
    ||||||| ||||||||| |  ||| |||||||||||| || ||||||  ||||||||  ||||||| || || |||||||| ||   | || ||||||||    
T  43599 acttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaacc-agctcacgacattacaaaatcgtgtca 43501  T
Q  384 cgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 437  Q
    |||| ||| ||||||| ||||||||| || |||||||| |||| ||||||||||    
T  43500 cgatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaag 43447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 45744 - 45804
Alignment:
Q  390 caaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 449  Q
    |||||| ||| ||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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