View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10361_high_11 (Length: 347)

Name: NF10361_high_11
Description: NF10361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10361_high_11
NF10361_high_11
[»] chr2 (5 HSPs)
chr2 (5-197)||(18929696-18929887)
chr2 (21-201)||(17403198-17403377)
chr2 (3-104)||(26651299-26651400)
chr2 (49-169)||(25519999-25520118)
chr2 (25-81)||(29890937-29890993)
[»] chr3 (9 HSPs)
chr3 (24-202)||(9033046-9033225)
chr3 (18-201)||(4770126-4770307)
chr3 (23-172)||(4765286-4765434)
chr3 (24-104)||(15687340-15687420)
chr3 (9-102)||(16242605-16242699)
chr3 (5-103)||(24698727-24698825)
chr3 (7-104)||(29614037-29614135)
chr3 (24-91)||(4832190-4832258)
chr3 (21-104)||(13428406-13428488)
[»] chr6 (6 HSPs)
chr6 (18-201)||(17525263-17525444)
chr6 (43-171)||(31125745-31125872)
chr6 (24-198)||(22394009-22394179)
chr6 (20-104)||(16177672-16177759)
chr6 (7-63)||(1176918-1176974)
chr6 (7-93)||(32784447-32784534)
[»] chr5 (11 HSPs)
chr5 (7-174)||(20064063-20064227)
chr5 (7-105)||(25951685-25951783)
chr5 (7-104)||(20058300-20058397)
chr5 (7-105)||(21165557-21165655)
chr5 (7-107)||(23209772-23209872)
chr5 (11-104)||(20061232-20061323)
chr5 (60-104)||(19217727-19217771)
chr5 (23-131)||(24878782-24878889)
chr5 (60-135)||(17987914-17987988)
chr5 (7-58)||(20713596-20713647)
chr5 (25-135)||(22011479-22011588)
[»] chr4 (2 HSPs)
chr4 (3-105)||(11362058-11362160)
chr4 (60-138)||(10071001-10071078)
[»] chr8 (6 HSPs)
chr8 (5-105)||(23539981-23540081)
chr8 (6-216)||(28371496-28371705)
chr8 (24-102)||(10662109-10662187)
chr8 (24-201)||(16600980-16601159)
chr8 (61-201)||(22713164-22713303)
chr8 (60-136)||(24092825-24092900)
[»] chr7 (7 HSPs)
chr7 (24-117)||(2545771-2545864)
chr7 (7-104)||(4173104-4173201)
chr7 (3-102)||(14986744-14986839)
chr7 (3-102)||(15416355-15416450)
chr7 (3-105)||(20146269-20146371)
chr7 (70-106)||(2563197-2563233)
chr7 (25-81)||(10648940-10648996)
[»] chr1 (5 HSPs)
chr1 (23-216)||(22619579-22619770)
chr1 (5-104)||(11013493-11013592)
chr1 (5-101)||(20146590-20146686)
chr1 (23-105)||(17615684-17615766)
chr1 (48-104)||(13232414-13232470)
[»] scaffold0002 (1 HSPs)
scaffold0002 (48-201)||(373696-373847)
[»] scaffold0795 (1 HSPs)
scaffold0795 (3-104)||(5725-5826)
[»] scaffold0555 (1 HSPs)
scaffold0555 (17-97)||(5337-5417)
[»] scaffold0161 (1 HSPs)
scaffold0161 (18-97)||(5309-5388)
[»] scaffold0264 (1 HSPs)
scaffold0264 (30-94)||(21273-21337)


Alignment Details
Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 18929696 - 18929887
Alignment:
Q  5 gaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  18929696 gaaactcctttaattgaggaaaatacttcaattcctgcaagagtaaaagtcaactaatgttcaccacattaaatgaggttggtgaaaataccagctaaca 18929795  T
Q  105 aattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgat 197  Q
    |||| |||| ||| ||||| |||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18929796 aatttcccctcaa-aaatgtcattttcgactgaatatattcaaaggagagaattgacatttttgagaaaactctaagtatttcaaagcatgat 18929887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 21 - 201
Target Start/End: Original strand, 17403198 - 17403377
Alignment:
Q  21 aagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaa 120  Q
    ||||||||||||||||| ||||||  |||||| | ||| |||||||||||||||||||||||||||| ||| |||||||||| ||||| |||   || ||    
T  17403198 aagaaaagacttcaattgctgcaaaggtaaaagttaactaatgttgaccacattaaatgaggctggtaaaattaccagctaaaaaatttcccaaaaaaaa 17403297  T
Q  121 atgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtca 201  Q
    |||||||||| |||  || ||  || | |||||  |||||||||||| || |||| |||||||||||||||||||||||||    
T  17403298 atgccatttttgactaaagattttcgaaggagaagattgacatttttcag-aaactctaagtatttcaaagcatgatgtca 17403377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 26651299 - 26651400
Alignment:
Q  3 ttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 102  Q
    ||||||||||||   |||||||||| ||||| ||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| |||| |||||    
T  26651299 ttgaaactccttaagttgaagaaaaaacttcgatttctgcaagagtaaaagtcaactaatattgaccacattaaatgaggctggtgaaattacctgctaa 26651398  T
Q  103 ca 104  Q
    ||    
T  26651399 ca 26651400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 25520118 - 25519999
Alignment:
Q  49 aaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaac 148  Q
    |||| ||||| |||||||||  ||||||||  | ||  |||||||||   ||||||||||||| ||||| |||||||||||||||| |||||||||| |     
T  25520118 aaaagtcaactaatgttgactgcattaaattggccttttgaaaatacagcctaacaaattgccacccaa-aaatgccattttcgactgaatataatcgaa 25520020  T
Q  149 ggagagaattgacatttttga 169  Q
    ||||| ||||| |||||||||    
T  25520019 ggagataattggcatttttga 25519999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 29890993 - 29890937
Alignment:
Q  25 aaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgag 81  Q
    ||||||||| | ||||||||   ||||| |||||||||||||||| |||||||||||    
T  29890993 aaagacttcgactcctgcaaagataaaactcaaccaatgttgaccgcattaaatgag 29890937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 5e-53; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 9033225 - 9033046
Alignment:
Q  24 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaatt--gccccccaagaaa 121  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||| |||    
T  9033225 aaaagacttcaattcctgcaagagtaaaagtcaactaatgttgaccatattaaatgaggctggtgaaaataccagctaacaaattgggacccccaa-aaa 9033127  T
Q  122 tgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtcac 202  Q
    ||||||||||||| |||||||||||| |||| |||||| |||||||| |||||    ||||||| ||||||||||||||||    
T  9033126 tgccattttcgactgaatataatcaaaggagggaattggcatttttgggaaaaattaaagtattccaaagcatgatgtcac 9033046  T

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Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 201
Target Start/End: Original strand, 4770126 - 4770307
Alignment:
Q  18 ttgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaa 117  Q
    |||||||||||||| | |||||||||||  ||||| | ||| ||||||| |||||||||| ||| ||| | ||| ||||||||||||| || ||||||      
T  4770126 ttgaagaaaagactacgattcctgcaaggataaaagtaaacgaatgttggccacattaaacgagtctgttaaaattaccagctaacaatttacccccc-t 4770224  T
Q  118 gaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtca 201  Q
    ||||||||||||||||| |||| || || | ||||||||||| ||||||| || |||| |||||||||||||||||||||||||    
T  4770225 gaaatgccattttcgactgaatctattcgaaggagagaattggcattttttag-aaactctaagtatttcaaagcatgatgtca 4770307  T

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Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 4765434 - 4765286
Alignment:
Q  23 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 122  Q
    ||||| ||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||| |||||||||| | |||||| ||||    
T  4765434 gaaaaaacttcgattcctgcaagagtaaaagtcaactaatgttgatcacattaaatgaggctggtgaaaattccaactaacaaattacaccccaa-aaat 4765336  T
Q  123 gccattttcgacggaatataatcaacggagagaattgacatttttgagaa 172  Q
    |||||||||||| ||| | | |  | |||||||||||  |||||||||||    
T  4765335 gccattttcgactgaacaaattagaaggagagaattggtatttttgagaa 4765286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 15687340 - 15687420
Alignment:
Q  24 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    |||||||||  |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  15687340 aaaagactttgattcctacaagagtaaaagtcaactaatgttgaccacattaaatgaggctggtgaacttaccagctaaca 15687420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 16242699 - 16242605
Alignment:
Q  9 ctcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatc-aaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 102  Q
    ||||||||||||| |||||||||||  ||||||||| ||||| | || ||| ||||||||||||||||||||||| || ||||||||||||||||    
T  16242699 ctcctttgattgaggaaaagacttcgcttcctgcaaaagtaacagtctaactaatgttgaccacattaaatgaggttgatgaaaataccagctaa 16242605  T

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Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 24698825 - 24698727
Alignment:
Q  5 gaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaac 103  Q
    ||||||||||   ||||||||||||||||||||||| ||| ||||||| ||||| ||||||||| | ||||||||||| |||||||| || ||||||||    
T  24698825 gaaactccttatgttgaagaaaagacttcaattcctccaatagtaaaagtcaactaatgttgactaaattaaatgaggttggtgaaattatcagctaac 24698727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 29614135 - 29614037
Alignment:
Q  7 aactcctttgattgaagaaaaga-cttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    |||||||| | |||||||||| | |||  |||| ||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||| |||||||||    
T  29614135 aactccttcgtttgaagaaaaaaactttgattcatgcaagagtaaaagtcaactaatattgaccacattaaatgaggctagtgaaaatagcagctaaca 29614037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 4832258 - 4832190
Alignment:
Q  24 aaaagacttcaattcctgcaagagtaaaaa-tcaaccaatgttgaccacattaaatgaggctggtgaaa 91  Q
    |||||||||| ||||||||||   |||||| ||||| ||||||||||| ||||||||||||||||||||    
T  4832258 aaaagacttcgattcctgcaaagataaaaagtcaactaatgttgaccatattaaatgaggctggtgaaa 4832190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 13428488 - 13428406
Alignment:
Q  21 aagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    ||||||| ||||| |||| ||||| ||  ||| ||||| ||||| |||| ||||||| ||||||||||||| ||||||||||||    
T  13428488 aagaaaacacttcgattcatgcaa-agataaagtcaactaatgtcgaccgcattaaacgaggctggtgaaattaccagctaaca 13428406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 201
Target Start/End: Original strand, 17525263 - 17525444
Alignment:
Q  18 ttgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaa 117  Q
    ||||||||||| |||| ||||||  | |||||||| ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  17525263 ttgaagaaaaggcttcgattcctagaggagtaaaagtcaactaatgttgaccacattaaatgagactggtgaaattaccagctaacaaattgccccccaa 17525362  T
Q  118 gaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtca 201  Q
     |||||| |||||||||  |||||| |||| |||||||||    |||||||| ||||| |||||||||| ||||||||||||||    
T  17525363 -aaatgctattttcgacaaaatatattcaaaggagagaatcagaatttttga-aaaactctaagtatttaaaagcatgatgtca 17525444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 171
Target Start/End: Complemental strand, 31125872 - 31125745
Alignment:
Q  43 aagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatata 142  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||  |||||| || |||||||    
T  31125872 aagagtaaaagtcaactaatgttgaccacattaaatgaggatggtgaaaatatcagctaaaaaattgccccctaa-aaatgaaattttctactgaatata 31125774  T
Q  143 atcaacggagagaattgacatttttgaga 171  Q
     |||| ||||||||||| |||||||||||    
T  31125773 ttcaaaggagagaattggcatttttgaga 31125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 22394179 - 22394009
Alignment:
Q  24 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatg 123  Q
    |||||||||  ||||||||||||||||||   ||| ||||||||||||||||||  |||||||||||| ||||| |||||| |||||||||||| |||||    
T  22394179 aaaagactttgattcctgcaagagtaaaacggaactaatgttgaccacattaaa--aggctggtgaaattaccaactaacagattgccccccaa-aaatg 22394083  T
Q  124 ccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatg 198  Q
     ||||||||||  ||| || |  | ||||| |||||  ||||||||| |||| ||||||||| || |||||||||    
T  22394082 tcattttcgacaaaatctatttgaaggagataattggaatttttgag-aaactctaagtattccagagcatgatg 22394009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 16177672 - 16177759
Alignment:
Q  20 gaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct---ggtgaaaataccagctaaca 104  Q
    |||||||||||||  |||||| ||||||||||| ||||| |||||| ||||||||||||||||||   ||||||||||||||||||||    
T  16177672 gaagaaaagactttgattcctacaagagtaaaagtcaactaatgttaaccacattaaatgaggctggaggtgaaaataccagctaaca 16177759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 1176974 - 1176918
Alignment:
Q  7 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatg 63  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  1176974 aactccttttattgaagaaaagatttcgattcctgcaagagtaaaagtcaactaatg 1176918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 32784447 - 32784534
Alignment:
Q  7 aactcctttgattgaagaaaa-gacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaat 93  Q
    |||||| ||||||| |||||| || ||||||||||| || ||||||| ||||| ||| || ||||||||||||||| ||| |||||||    
T  32784447 aactccattgattgtagaaaaagatttcaattcctgtaaaagtaaaagtcaactaatattaaccacattaaatgagactgatgaaaat 32784534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 20064227 - 20064063
Alignment:
Q  7 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaa 106  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||| |||||||||||    
T  20064227 aactcttttgattgaagaaaagacttcgattcctgcaagagtaaaagtcaactgatgttgaccacattaaacgaggctggtgaaaataacagctaacaaa 20064128  T
Q  107 ttgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaa 174  Q
    ||| ||||||| ||||| |||||||||  ||   || |||| |||||| ||||||||||||| |||||    
T  20064127 ttgtcccccaa-aaatgtcattttcgaatga--ctactcaaaggagaggattgacatttttgggaaaa 20064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 25951685 - 25951783
Alignment:
Q  7 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 105  Q
    |||||||||||||  |||||||||||  |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25951685 aactcctttgattagagaaaagactttgattcgtgcaagagtaaaagtcaactaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 25951783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 20058397 - 20058300
Alignment:
Q  7 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||  |||||||||||||||||||||||||||||| |||||||||    
T  20058397 aactcttttgattgaagaaaagacttcgattcctgcaagagtaaaagtcaactaatactgaccacattaaatgaggctggtgaaaatatcagctaaca 20058300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 21165557 - 21165655
Alignment:
Q  7 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 105  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||| |||||||||    
T  21165557 aactcctttgattgaaggaaagacttcgcttcctgcaagagtaaaagtcaactaatgttgaccacattaagtgaggctggtaaaaatactagctaacaa 21165655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 23209872 - 23209772
Alignment:
Q  7 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaa 106  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||| ||||| ||||||| |||    
T  23209872 aactcctttgtttgaagaaaatacttcgattcctgcaagagtaaaagtcaactattgttgaccacattaattgaggctggtgcaaataacagctaataaa 23209773  T
Q  107 t 107  Q
    |    
T  23209772 t 23209772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 20061232 - 20061323
Alignment:
Q  11 cctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    ||||| ||||||||||| ||||| |||||||||||||||||| ||||| |||| |||||| |||||| |||||||||| |||||||||| ||||    
T  20061232 cctttcattgaagaaaa-acttcgattcctgcaagagtaaaagtcaactaatggtgaccatattaaacgaggctggtg-aaataccagcaaaca 20061323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 19217771 - 19217727
Alignment:
Q  60 aatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  19217771 aatgttgaccacattaaatgaggctggtgaaattaccagctaaca 19217727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 24878782 - 24878889
Alignment:
Q  23 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 122  Q
    ||||||||||| |||| |||||   ||||| ||||| |||||||||  ||||||||||| ||| ||||| |||  |||||||||||| ||||||| ||||    
T  24878782 gaaaagacttcgattcttgcaaagataaaagtcaactaatgttgactgcattaaatgagcctgttgaaattacaggctaacaaattgacccccaa-aaat 24878880  T
Q  123 gccattttc 131  Q
    | |||||||    
T  24878881 gtcattttc 24878889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 17987914 - 17987988
Alignment:
Q  60 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacg 135  Q
    ||||||||||| |||||||||| |||  |||| ||| |||||||||| |||||||||| |||| ||||||||||||    
T  17987914 aatgttgaccatattaaatgagcctgtcgaaattacaagctaacaaaatgccccccaa-aaatcccattttcgacg 17987988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 20713596 - 20713647
Alignment:
Q  7 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaac 58  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||| |||||    
T  20713596 aactcctttgattgaagaaaagactttgattcctgcaagaataaaagtcaac 20713647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 22011479 - 22011588
Alignment:
Q  25 aaagacttcaattcctgcaagagtaaaaa-tcaaccaa-tgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 122  Q
    |||| |||| |||||||||| |||||||| |||||||| |||||||||||||||||||  ||| ||||| |||   |||||||| |||||||  | ||||    
T  22011479 aaagccttcgattcctgcaa-agtaaaaagtcaaccaaatgttgaccacattaaatgaatctgttgaaattacagactaacaaactgccccc--aaaaat 22011575  T
Q  123 gccattttcgacg 135  Q
    |||||||||||||    
T  22011576 gccattttcgacg 22011588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 11362058 - 11362160
Alignment:
Q  3 ttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 102  Q
    ||||||||||||   ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  11362058 ttgaaactccttaagttgaagaaaagacttcaatacctgcaagagtaaaagtcaactaatgttgaccactttaaatgaggctggtgaaaataccagctaa 11362157  T
Q  103 caa 105  Q
    |||    
T  11362158 caa 11362160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 10071001 - 10071078
Alignment:
Q  60 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaa 138  Q
    ||||||||||| |||||||||| |||  |||| |||  ||||||||| | |||||||| |||||| |||||||||||||    
T  10071001 aatgttgaccatattaaatgagcctgtcgaaattacaggctaacaaaattccccccaa-aaatgcaattttcgacggaa 10071078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 23540081 - 23539981
Alignment:
Q  5 gaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||    
T  23540081 gaaactcctttgattgaagaaaagacttcaaatactgcaagagtaaaagtcaactaatattgaccacattaaatgaggctggtgacaatacgagctaaca 23539982  T
Q  105 a 105  Q
    |    
T  23539981 a 23539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 216
Target Start/End: Original strand, 28371496 - 28371705
Alignment:
Q  6 aaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 105  Q
    |||||||||| | ||| | ||||  ||| |||||| | ||| ||||| ||||| ||| ||| ||||||||||| | ||| |||||||||||| |||||||    
T  28371496 aaactcctttaactgagggaaaggtttcgattcctaccagaataaaagtcaactaatattggccacattaaattatgctagtgaaaataccaactaacaa 28371595  T
Q  106 attgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtcacaat 205  Q
    |||||| || || |||||  ||||||||| ||||| | ||||  |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||  |    
T  28371596 attgccaccaaa-aaatgttattttcgactgaatacattcaaaagagagaattgacatttttgagaaaactctatgtattccaaagcatgatgtcactct 28371694  T
Q  206 tatcatgactt 216  Q
     ||||||||||    
T  28371695 aatcatgactt 28371705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 10662109 - 10662187
Alignment:
Q  24 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 102  Q
    |||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || |||||||    
T  10662109 aaaagacttcgagtcctgcaagagtaaaagtcaactaatgttgaccacattaaatgagtctggtgaaattatcagctaa 10662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 16600980 - 16601159
Alignment:
Q  24 aaaagacttcaattcctgcaagagtaaaaa-tcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 122  Q
    |||| ||||||||||||||||   |||||| ||||| |||||||||  ||||||||||| ||| ||||| |||  ||||| |||||| ||| ||| ||||    
T  16600980 aaaatacttcaattcctgcaaagataaaaagtcaactaatgttgactgcattaaatgagtctgttgaaattacaggctaataaattg-ccctcaaaaaat 16601078  T
Q  123 gccattttcgacggaatata-atcaacggagagaattgacatttttgagaaaacg--ctaagtatttcaaagcatgatgtca 201  Q
    | |||||||||| ||| | |  || | |||| |||||||||||||||| ||||||  | ||| |||||||||||||||||||    
T  16601079 gtcattttcgactgaaaaaatttcgaaggagggaattgacatttttga-aaaacgtcccaagcatttcaaagcatgatgtca 16601159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 201
Target Start/End: Complemental strand, 22713303 - 22713164
Alignment:
Q  61 atgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattga 160  Q
    ||||||||  ||||||| ||| ||| | ||| |||  ||| |||||||||||||  | ||||| |||||||||| ||| ||  |||| | |||  ||||     
T  22713303 atgttgactgcattaaacgagcctgttaaaactacaggcttacaaattgcccccacaaaaatgtcattttcgactgaaaattttcaaagaagaatattgg 22713204  T
Q  161 catttttgagaaaacgctaagtatttcaaagcatgatgtca 201  Q
     |||||||| ||||| |||||||||||||||||||| ||||    
T  22713203 aatttttga-aaaactctaagtatttcaaagcatgacgtca 22713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 24092900 - 24092825
Alignment:
Q  60 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacgg 136  Q
    |||||| ||||||||||||||| |||  |||| |||  |||| |||| |||||||||| |||| |||||||||||||    
T  24092900 aatgttaaccacattaaatgagcctgtcgaaattacaggctatcaaactgccccccaa-aaataccattttcgacgg 24092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 2545771 - 2545864
Alignment:
Q  24 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaa 117  Q
    |||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2545771 aaaagacttcgattcctgcaagagtaaaagtcaagtaatgttgaccacattaaatgaggctggtgaaattaccagctaacaaattgcctcccaa 2545864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 4173201 - 4173104
Alignment:
Q  7 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    ||||| ||||||||||| ||| ||||  || ||||||| | || || ||||| |||||||| |||||||||| |||| ||||||||||||||||||||    
T  4173201 aactcttttgattgaaggaaatactttgatacctgcaaaattataagtcaactaatgttgaacacattaaataaggcaggtgaaaataccagctaaca 4173104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 14986839 - 14986744
Alignment:
Q  3 ttgaaactcctttgattgaagaaaag-acttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagcta 101  Q
    |||||||| |||| |||| ||||||  ||||  |||||||||||||||||| ||||| |||||||||||     ||||||||||||||||||||||||||    
T  14986839 ttgaaacttcttttattggagaaaaatacttggattcctgcaagagtaaaagtcaactaatgttgacca-----aatgaggctggtgaaaataccagcta 14986745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 15416450 - 15416355
Alignment:
Q  3 ttgaaactcctttgattgaagaaaag-acttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagcta 101  Q
    |||||||| |||| |||| ||||||  ||||  |||||||||||||||||| ||||| |||||||||||     ||||||||||||||||||||||||||    
T  15416450 ttgaaacttcttttattggagaaaaatacttggattcctgcaagagtaaaagtcaactaatgttgacca-----aatgaggctggtgaaaataccagcta 15416356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 20146269 - 20146371
Alignment:
Q  3 ttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 102  Q
    ||||||||||||| |  |||| |||  |||| ||||||  || ||||||| ||||| |||||||||||||||| || | |||| ||||||||||| ||||    
T  20146269 ttgaaactcctttaacagaaggaaaagcttcgattcctttaacagtaaaagtcaactaatgttgaccacattacataacgctgatgaaaataccatctaa 20146368  T
Q  103 caa 105  Q
    |||    
T  20146369 caa 20146371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 2563197 - 2563233
Alignment:
Q  70 acattaaatgaggctggtgaaaataccagctaacaaa 106  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2563197 acattaaatgaggctggtgaaattaccagctaacaaa 2563233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 10648996 - 10648940
Alignment:
Q  25 aaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgag 81  Q
    ||||||||| |||| |||||   ||| | ||||||||||||||||||||||||||||    
T  10648996 aaagacttcgattcttgcaaagataatagtcaaccaatgttgaccacattaaatgag 10648940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 216
Target Start/End: Complemental strand, 22619770 - 22619579
Alignment:
Q  23 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 122  Q
    ||||||||||| ||||||||||   ||||| ||||| |||||||||||||||||||||| ||  || |||||   |||||||||||||| ||||| ||||    
T  22619770 gaaaagacttcgattcctgcaaagataaaagtcaactaatgttgaccacattaaatgagccttttggaaatataggctaacaaattgcctcccaa-aaat 22619672  T
Q  123 gccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtcacaattatcatgactt 216  Q
    | |||||||||| ||||| | || | ||||| |||||  | |||||| |||||  |||||||||||||||||||||||| | | ||||||||||    
T  22619671 gtcattttcgactgaatacattcgaaggagataattggtaattttga-aaaactataagtatttcaaagcatgatgtcatattaatcatgactt 22619579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 11013592 - 11013493
Alignment:
Q  5 gaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    ||||||||||   |||||||||||||||| |||||||||||||||||| | | | |||||||||||||||||||||||||| ||||| ||||||||||||    
T  11013592 gaaactccttaagttgaagaaaagacttcgattcctgcaagagtaaaagtaagctaatgttgaccacattaaatgaggctgatgaaattaccagctaaca 11013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 20146590 - 20146686
Alignment:
Q  5 gaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagcta 101  Q
    |||||||||  ||||||  |||||||||| |||||||||||||||| | | ||| ||||||| |||||||||||||| |||||||| ||||||||||    
T  20146590 gaaactcctacgattgagtaaaagacttcgattcctgcaagagtaatagttaactaatgttggccacattaaatgagactggtgaatataccagcta 20146686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 17615684 - 17615766
Alignment:
Q  23 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 105  Q
    ||||||| ||| ||||||||||   ||||| ||||| |||||||||| ||||||||||| ||| ||||| |||  ||||||||    
T  17615684 gaaaagatttcgattcctgcaaagataaaagtcaactaatgttgaccgcattaaatgagtctgttgaaattacatgctaacaa 17615766  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 13232470 - 13232414
Alignment:
Q  48 taaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 104  Q
    ||||| ||||| ||||||||||||||||||| ||| |||| ||| ||||| ||||||    
T  13232470 taaaagtcaactaatgttgaccacattaaataaggttggtcaaattaccacctaaca 13232414  T

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Target: scaffold0002 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 373847 - 373696
Alignment:
Q  48 taaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaa 147  Q
    ||||| ||||| ||||||||||||||||||||||| |||| |||  |||| ||||||||||||||||||| ||| ||||||||||||  ||  |  |  |    
T  373847 taaaagtcaactaatgttgaccacattaaatgaggttggtaaaataaccaactaacaaattgccccccaa-aaaagccattttcgacttaaattttttga 373749  T
Q  148 cggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtca 201  Q
     | ||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  373748 agaagagaattgtcatttttga-aaaactctaagtatttcaaagcatgatgtca 373696  T

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Target: scaffold0795 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 5826 - 5725
Alignment:
Q  3 ttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 102  Q
    ||||||||||||| | ||| |||||| |||| ||||||||||||  |||| ||| | |||||||||| |||||||||||| |||| ||||||||||||||    
T  5826 ttgaaactcctttaactgaggaaaaggcttcgattcctgcaagaaaaaaagtcacctaatgttgaccgcattaaatgaggttggtaaaaataccagctaa 5727  T
Q  103 ca 104  Q
    ||    
T  5726 ca 5725  T

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Target: scaffold0555 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 5417 - 5337
Alignment:
Q  17 attgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatacca 97  Q
    ||||| ||||| ||||| || ||||||||||||||| ||||| || |||||||||| ||||||||||||||||||||||||    
T  5417 attgatgaaaaaacttcgatacctgcaagagtaaaagtcaactaaagttgaccacaataaatgaggctggtgaaaatacca 5337  T

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Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 5309 - 5388
Alignment:
Q  18 ttgaagaaaagacttcaattcctgc-aagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatacca 97  Q
    |||||||||||||||  |||||||| |||| ||||| ||||| ||||||||||||||||||||| |||||||||| |||||    
T  5309 ttgaagaaaagactttgattcctgcgaaga-taaaagtcaactaatgttgaccacattaaatgatgctggtgaaattacca 5388  T

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Target: scaffold0264 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 21273 - 21337
Alignment:
Q  30 cttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaata 94  Q
    |||| |||| ||||| | ||||| ||||| |||||||| || ||||||||||| |||||||||||    
T  21273 cttcgattcttgcaaaaataaaagtcaacaaatgttgatcatattaaatgaggatggtgaaaata 21337  T

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