View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10362_high_6 (Length: 342)
Name: NF10362_high_6
Description: NF10362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10362_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 2 - 331
Target Start/End: Original strand, 26052536 - 26052851
Alignment:
| Q |
2 |
gaattgagcaacacaaaacagcgtttgatttgatgaatggcagcgacgcaatttggaaggcgagtgggaaggatagtgaaagaaagaatagaaagaagga |
101 |
Q |
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| T |
26052536 |
gaattgagcaacacaaaacagcgtttg-----atgaatggcaacgacgcaattcggaaggcgagtgggaaggatagtgaaagaaagaatagaaagaagga |
26052630 |
T |
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| Q |
102 |
aaagcagcgttatacgtgaaggattatggaacgatcctttcatggttgcttctactcgcgccattgcagaaagaatccctttggttgatctcatcgtcca |
201 |
Q |
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| T |
26052631 |
aaagcagcgttatacgtgaaggattatggaacgatcctttcatggttgcttctactcgcgccattgcagaaagaatccctttggttgatctcatcgtcca |
26052730 |
T |
|
| Q |
202 |
tgtcactgatgcaaggattccattctcctctcaatgtcatttactcacacaaacttcacataatcatattctcgctctcaataaagctgatctcgcttct |
301 |
Q |
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| T |
26052731 |
tgtcactgatgcaaggattccattctcctctcaatgtcatttactca---------cacataatcatattatcgttctcaataaagctgatctcgcttct |
26052821 |
T |
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| Q |
302 |
cgttcctctttacaggttcattacttctct |
331 |
Q |
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||||||||||||||||||| |||||||||| |
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| T |
26052822 |
cgttcctctttacaggttcgttacttctct |
26052851 |
T |
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