View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10363_high_2 (Length: 712)

Name: NF10363_high_2
Description: NF10363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10363_high_2
NF10363_high_2
[»] chr3 (60 HSPs)
chr3 (27-545)||(31111056-31111594)
chr3 (557-693)||(1928351-1928487)
chr3 (560-663)||(8314016-8314119)
chr3 (560-663)||(42673244-42673346)
chr3 (560-663)||(48159900-48160003)
chr3 (560-663)||(53687891-53687994)
chr3 (557-663)||(27238848-27238954)
chr3 (560-663)||(10293611-10293715)
chr3 (560-663)||(20968967-20969070)
chr3 (560-663)||(22429161-22429264)
chr3 (560-663)||(40848524-40848626)
chr3 (560-663)||(48160281-48160384)
chr3 (560-663)||(3353131-3353231)
chr3 (560-676)||(42672981-42673096)
chr3 (576-663)||(21896459-21896546)
chr3 (560-663)||(22429544-22429646)
chr3 (560-663)||(27238468-27238571)
chr3 (560-663)||(40848909-40849012)
chr3 (560-663)||(47666283-47666386)
chr3 (557-663)||(26007567-26007673)
chr3 (557-635)||(53766163-53766241)
chr3 (557-663)||(9026736-9026839)
chr3 (560-663)||(36180559-36180660)
chr3 (560-663)||(10348747-10348850)
chr3 (560-663)||(26007185-26007287)
chr3 (579-693)||(28702299-28702410)
chr3 (560-663)||(53688251-53688353)
chr3 (557-663)||(3353500-3353604)
chr3 (561-658)||(4947263-4947362)
chr3 (577-685)||(10771523-10771629)
chr3 (560-659)||(47871073-47871172)
chr3 (560-647)||(10293873-10293960)
chr3 (560-663)||(10348482-10348585)
chr3 (560-647)||(20968721-20968808)
chr3 (560-663)||(24485408-24485510)
chr3 (585-663)||(24485049-24485127)
chr3 (560-633)||(36180968-36181041)
chr3 (590-663)||(42456144-42456216)
chr3 (626-693)||(1927812-1927878)
chr3 (560-647)||(18875155-18875242)
chr3 (560-663)||(44007970-44008073)
chr3 (560-663)||(44008349-44008451)
chr3 (560-619)||(45060863-45060922)
chr3 (557-618)||(14015957-14016017)
chr3 (560-620)||(42455793-42455853)
chr3 (560-619)||(1927775-1927834)
chr3 (560-663)||(47665914-47666017)
chr3 (558-611)||(1101090-1101143)
chr3 (560-610)||(8315083-8315132)
chr3 (558-611)||(13657621-13657675)
chr3 (560-613)||(3644781-3644834)
chr3 (557-609)||(14015694-14015746)
chr3 (562-610)||(18874887-18874935)
chr3 (559-611)||(26540693-26540744)
chr3 (625-663)||(18874957-18874996)
chr3 (628-663)||(21895700-21895735)
chr3 (560-647)||(42627511-42627596)
chr3 (557-611)||(23630035-23630089)
chr3 (560-647)||(47870826-47870910)
chr3 (560-621)||(53766569-53766630)
[»] chr8 (61 HSPs)
chr8 (560-693)||(22851393-22851527)
chr8 (560-693)||(39723965-39724099)
chr8 (560-693)||(13026638-13026772)
chr8 (560-693)||(3307341-3307475)
chr8 (560-693)||(9823278-9823412)
chr8 (557-673)||(13027219-13027335)
chr8 (560-693)||(9822751-9822885)
chr8 (570-693)||(39723415-39723539)
chr8 (560-693)||(13937307-13937440)
chr8 (560-690)||(13936726-13936853)
chr8 (576-693)||(6092794-6092911)
chr8 (557-693)||(15042145-15042281)
chr8 (560-663)||(41662350-41662454)
chr8 (557-663)||(34498122-34498227)
chr8 (560-663)||(15156132-15156236)
chr8 (560-663)||(24473716-24473819)
chr8 (560-663)||(37396711-37396814)
chr8 (560-663)||(765737-765841)
chr8 (560-663)||(43245874-43245978)
chr8 (560-663)||(6199044-6199147)
chr8 (560-663)||(17431290-17431393)
chr8 (626-693)||(22851903-22851970)
chr8 (560-663)||(12281127-12281231)
chr8 (560-663)||(15442766-15442869)
chr8 (560-663)||(34498503-34498606)
chr8 (560-663)||(37397093-37397196)
chr8 (557-635)||(25439102-25439179)
chr8 (560-647)||(15155886-15155973)
chr8 (560-663)||(20861586-20861689)
chr8 (560-663)||(24473346-24473449)
chr8 (560-663)||(41662524-41662627)
chr8 (557-663)||(15444595-15444701)
chr8 (560-663)||(6198661-6198764)
chr8 (560-647)||(37752381-37752467)
chr8 (557-663)||(33727053-33727159)
chr8 (560-648)||(37752087-37752176)
chr8 (560-663)||(16928945-16929047)
chr8 (560-663)||(9623505-9623608)
chr8 (560-647)||(12281390-12281477)
chr8 (560-647)||(16929207-16929293)
chr8 (560-619)||(23123341-23123400)
chr8 (560-621)||(25438795-25438856)
chr8 (560-647)||(18020053-18020137)
chr8 (560-647)||(34313768-34313852)
chr8 (560-647)||(43246139-43246227)
chr8 (576-663)||(15043731-15043818)
chr8 (560-663)||(16169177-16169279)
chr8 (560-663)||(16169555-16169658)
chr8 (597-663)||(37752154-37752221)
chr8 (561-611)||(43162539-43162588)
chr8 (579-663)||(74932-75016)
chr8 (558-608)||(74864-74915)
chr8 (560-663)||(2856529-2856632)
chr8 (560-663)||(15444214-15444317)
chr8 (577-647)||(9465838-9465908)
chr8 (560-653)||(3463903-3463996)
chr8 (560-609)||(22851958-22852007)
chr8 (560-609)||(43162237-43162285)
chr8 (560-611)||(41662110-41662161)
chr8 (562-647)||(7127789-7127877)
chr8 (558-610)||(22786934-22786987)
[»] chr7 (57 HSPs)
chr7 (560-693)||(44599492-44599626)
chr7 (560-693)||(13863875-13864007)
chr7 (560-693)||(13863316-13863450)
chr7 (560-673)||(44600073-44600186)
chr7 (560-693)||(8643684-8643817)
chr7 (560-693)||(46816229-46816362)
chr7 (557-663)||(18863967-18864073)
chr7 (560-663)||(20419272-20419375)
chr7 (560-663)||(22740159-22740262)
chr7 (560-663)||(3205041-3205144)
chr7 (560-663)||(10533037-10533140)
chr7 (560-663)||(17156970-17157073)
chr7 (560-663)||(37888836-37888939)
chr7 (557-663)||(20418888-20418994)
chr7 (560-663)||(13744181-13744283)
chr7 (560-663)||(37889207-37889310)
chr7 (560-663)||(37972344-37972447)
chr7 (560-663)||(3687604-3687707)
chr7 (560-663)||(9035240-9035344)
chr7 (560-663)||(9412272-9412376)
chr7 (560-663)||(37971963-37972066)
chr7 (558-652)||(22740550-22740643)
chr7 (584-693)||(46815195-46815304)
chr7 (560-663)||(9034870-9034974)
chr7 (560-663)||(13741560-13741663)
chr7 (560-663)||(29292925-29293028)
chr7 (560-663)||(38826861-38826964)
chr7 (557-663)||(42418976-42419082)
chr7 (560-663)||(48359323-48359424)
chr7 (560-663)||(18864350-18864452)
chr7 (560-663)||(29293294-29293397)
chr7 (560-663)||(3204672-3204773)
chr7 (560-663)||(36527746-36527849)
chr7 (557-663)||(36527384-36527489)
chr7 (561-663)||(48359606-48359707)
chr7 (560-647)||(9412026-9412113)
chr7 (560-663)||(42418594-42418697)
chr7 (557-647)||(27096306-27096395)
chr7 (557-647)||(27181908-27181997)
chr7 (560-620)||(5349724-5349781)
chr7 (560-640)||(8953863-8953939)
chr7 (560-647)||(3687356-3687445)
chr7 (560-611)||(13772901-13772952)
chr7 (560-647)||(23686683-23686768)
chr7 (560-647)||(29291809-29291896)
chr7 (583-647)||(5349489-5349550)
chr7 (560-610)||(6908216-6908265)
chr7 (560-618)||(13772644-13772702)
chr7 (560-610)||(38191566-38191616)
chr7 (560-648)||(5735255-5735344)
chr7 (560-613)||(30857902-30857955)
chr7 (580-619)||(35080215-35080254)
chr7 (626-663)||(5349709-5349747)
chr7 (559-605)||(5735553-5735599)
chr7 (591-647)||(15567026-15567079)
chr7 (560-621)||(16198967-16199028)
chr7 (560-609)||(18925065-18925114)
[»] chr6 (33 HSPs)
chr6 (560-693)||(33829553-33829687)
chr6 (560-673)||(33828993-33829106)
chr6 (560-663)||(7654496-7654599)
chr6 (560-663)||(10087806-10087909)
chr6 (560-663)||(33974247-33974350)
chr6 (560-663)||(3403936-3404040)
chr6 (557-663)||(32733944-32734050)
chr6 (560-663)||(18242103-18242207)
chr6 (557-663)||(30388311-30388416)
chr6 (560-659)||(21031982-21032081)
chr6 (560-647)||(18241857-18241944)
chr6 (560-663)||(22755038-22755140)
chr6 (571-663)||(29074320-29074412)
chr6 (571-663)||(29079084-29079176)
chr6 (571-663)||(29106893-29106985)
chr6 (560-647)||(10039679-10039764)
chr6 (560-647)||(11656746-11656833)
chr6 (560-663)||(22684306-22684408)
chr6 (560-663)||(22754660-22754762)
chr6 (560-618)||(3403720-3403778)
chr6 (557-619)||(31598720-31598781)
chr6 (560-647)||(21032243-21032331)
chr6 (560-663)||(2354412-2354514)
chr6 (564-663)||(13177004-13177102)
chr6 (558-657)||(21032101-21032203)
chr6 (560-652)||(2354769-2354861)
chr6 (557-607)||(12714431-12714481)
chr6 (560-611)||(3825530-3825580)
chr6 (560-611)||(23250595-23250645)
chr6 (585-663)||(13176647-13176725)
chr6 (585-663)||(32733585-32733663)
chr6 (591-663)||(2762517-2762590)
chr6 (625-662)||(23250840-23250877)
[»] chr2 (58 HSPs)
chr2 (559-693)||(7591203-7591337)
chr2 (560-693)||(2639399-2639533)
chr2 (560-693)||(26842155-26842289)
chr2 (560-693)||(26841590-26841724)
chr2 (560-693)||(2638823-2638958)
chr2 (560-673)||(18296079-18296192)
chr2 (560-693)||(7591767-7591901)
chr2 (557-663)||(8851148-8851254)
chr2 (560-663)||(7664251-7664354)
chr2 (560-663)||(7664621-7664724)
chr2 (557-663)||(26692768-26692874)
chr2 (560-663)||(30190926-30191030)
chr2 (560-663)||(8851531-8851633)
chr2 (557-663)||(26692396-26692502)
chr2 (626-693)||(18296639-18296707)
chr2 (557-663)||(40469676-40469783)
chr2 (560-657)||(24832334-24832432)
chr2 (560-663)||(20347411-20347515)
chr2 (590-693)||(38490758-38490862)
chr2 (560-663)||(16911217-16911319)
chr2 (557-663)||(32673090-32673196)
chr2 (560-635)||(37720207-37720282)
chr2 (560-663)||(41790860-41790963)
chr2 (557-663)||(41790491-41790596)
chr2 (560-664)||(5378664-5378768)
chr2 (560-664)||(5379906-5380010)
chr2 (560-663)||(6171404-6171507)
chr2 (564-676)||(6324924-6325036)
chr2 (560-663)||(16910830-16910933)
chr2 (560-663)||(17850981-17851083)
chr2 (560-619)||(18296685-18296744)
chr2 (560-635)||(18750102-18750176)
chr2 (557-663)||(19141797-19141901)
chr2 (557-663)||(5793447-5793553)
chr2 (585-663)||(7979593-7979671)
chr2 (585-663)||(17851350-17851428)
chr2 (560-660)||(6325298-6325398)
chr2 (560-663)||(11883626-11883730)
chr2 (560-647)||(11883890-11883977)
chr2 (560-647)||(30191189-30191276)
chr2 (560-663)||(26737728-26737832)
chr2 (560-653)||(15321395-15321486)
chr2 (558-647)||(15920779-15920867)
chr2 (557-618)||(18055309-18055370)
chr2 (560-661)||(19141447-19141547)
chr2 (591-663)||(7979951-7980023)
chr2 (560-647)||(20347166-20347252)
chr2 (558-611)||(43495484-43495537)
chr2 (560-609)||(6171159-6171207)
chr2 (560-609)||(6495723-6495772)
chr2 (560-647)||(32672845-32672932)
chr2 (560-647)||(40469430-40469517)
chr2 (557-635)||(18749726-18749803)
chr2 (559-609)||(29343583-29343633)
chr2 (560-609)||(29230285-29230334)
chr2 (558-610)||(15321513-15321565)
chr2 (560-610)||(6495470-6495519)
chr2 (626-675)||(31641551-31641600)
[»] chr4 (68 HSPs)
chr4 (557-693)||(36096392-36096529)
chr4 (560-693)||(50679341-50679475)
chr4 (557-693)||(43050607-43050744)
chr4 (560-693)||(43051169-43051303)
chr4 (560-673)||(50678782-50678895)
chr4 (560-693)||(45830115-45830247)
chr4 (560-693)||(36095820-36095953)
chr4 (560-693)||(56505696-56505830)
chr4 (560-693)||(56506491-56506625)
chr4 (557-693)||(47219122-47219255)
chr4 (560-676)||(39744400-39744516)
chr4 (560-693)||(28196691-28196824)
chr4 (560-663)||(4239314-4239417)
chr4 (560-663)||(9023628-9023731)
chr4 (560-663)||(23540200-23540303)
chr4 (560-663)||(28196349-28196452)
chr4 (560-662)||(25161881-25161983)
chr4 (560-693)||(32703568-32703701)
chr4 (560-693)||(45828997-45829130)
chr4 (560-676)||(293152-293268)
chr4 (560-663)||(169387-169490)
chr4 (560-663)||(9380310-9380413)
chr4 (560-663)||(9380689-9380792)
chr4 (560-663)||(43292040-43292143)
chr4 (560-663)||(16555764-16555868)
chr4 (560-663)||(9023247-9023350)
chr4 (560-663)||(32703228-32703331)
chr4 (560-693)||(11529171-11529305)
chr4 (560-663)||(169016-169120)
chr4 (576-663)||(25162261-25162348)
chr4 (560-663)||(39086571-39086674)
chr4 (560-663)||(39744033-39744136)
chr4 (560-693)||(48405965-48406097)
chr4 (560-663)||(3930427-3930530)
chr4 (560-663)||(292785-292888)
chr4 (558-663)||(13198604-13198711)
chr4 (560-663)||(26207694-26207797)
chr4 (557-663)||(48406333-48406438)
chr4 (560-663)||(23539844-23539945)
chr4 (560-647)||(13198870-13198957)
chr4 (560-663)||(26207364-26207466)
chr4 (560-663)||(43292306-43292408)
chr4 (576-663)||(44468871-44468958)
chr4 (561-647)||(49178779-49178866)
chr4 (560-646)||(18077167-18077253)
chr4 (560-618)||(24775776-24775834)
chr4 (560-647)||(35393741-35393826)
chr4 (560-657)||(23432479-23432577)
chr4 (560-611)||(16555518-16555569)
chr4 (560-611)||(22681578-22681628)
chr4 (590-656)||(11530154-11530219)
chr4 (585-663)||(12757794-12757872)
chr4 (577-647)||(39415244-39415314)
chr4 (580-664)||(23433433-23433516)
chr4 (560-647)||(3930182-3930268)
chr4 (560-647)||(11241392-11241478)
chr4 (560-619)||(11241653-11241711)
chr4 (560-663)||(39912057-39912158)
chr4 (560-618)||(5205991-5206049)
chr4 (601-663)||(12758152-12758214)
chr4 (589-635)||(39912463-39912509)
chr4 (560-609)||(22681881-22681930)
chr4 (560-611)||(8181994-8182046)
chr4 (560-611)||(8182172-8182224)
chr4 (560-619)||(5206222-5206280)
chr4 (560-610)||(25225399-25225449)
chr4 (562-611)||(49178644-49178694)
chr4 (558-610)||(24775642-24775695)
[»] scaffold0328 (2 HSPs)
scaffold0328 (560-693)||(6712-6846)
scaffold0328 (560-693)||(6155-6288)
[»] chr5 (57 HSPs)
chr5 (560-693)||(18817528-18817662)
chr5 (557-693)||(11351346-11351481)
chr5 (560-693)||(11350811-11350944)
chr5 (560-693)||(18816955-18817089)
chr5 (560-663)||(12498570-12498673)
chr5 (557-663)||(21207226-21207332)
chr5 (560-663)||(18433018-18433122)
chr5 (560-663)||(12498876-12498979)
chr5 (560-663)||(19514911-19515014)
chr5 (560-663)||(22729388-22729490)
chr5 (560-663)||(26570732-26570835)
chr5 (560-663)||(26571112-26571215)
chr5 (560-663)||(43464140-43464242)
chr5 (560-663)||(25115760-25115864)
chr5 (560-663)||(25174852-25174956)
chr5 (560-663)||(3888242-3888345)
chr5 (560-663)||(34147458-34147561)
chr5 (557-663)||(2817149-2817254)
chr5 (557-663)||(3888610-3888716)
chr5 (557-663)||(43463756-43463861)
chr5 (557-634)||(31569907-31569983)
chr5 (560-663)||(19514528-19514632)
chr5 (560-663)||(26020453-26020557)
chr5 (560-663)||(25940524-25940627)
chr5 (557-663)||(10098889-10098994)
chr5 (560-663)||(34147144-34147245)
chr5 (560-647)||(18433281-18433367)
chr5 (560-663)||(22729011-22729112)
chr5 (560-647)||(25175115-25175202)
chr5 (557-663)||(34576867-34576972)
chr5 (576-663)||(42919323-42919410)
chr5 (557-663)||(41072162-41072267)
chr5 (560-663)||(25940961-25941065)
chr5 (560-635)||(37610205-37610279)
chr5 (560-635)||(37780323-37780397)
chr5 (557-663)||(11316922-11317028)
chr5 (560-635)||(10098522-10098597)
chr5 (560-611)||(25116061-25116112)
chr5 (560-647)||(22428937-22429021)
chr5 (560-611)||(33324838-33324889)
chr5 (560-647)||(34577129-34577214)
chr5 (560-635)||(37780718-37780793)
chr5 (557-655)||(11316714-11316812)
chr5 (557-610)||(41382893-41382945)
chr5 (560-636)||(5187805-5187881)
chr5 (591-663)||(37610567-37610638)
chr5 (560-635)||(2817551-2817625)
chr5 (560-619)||(22429188-22429246)
chr5 (557-652)||(30401882-30401977)
chr5 (558-619)||(9665558-9665617)
chr5 (560-648)||(16466708-16466793)
chr5 (563-609)||(16726084-16726130)
chr5 (558-605)||(12441196-12441244)
chr5 (558-610)||(23011383-23011434)
chr5 (560-664)||(41383117-41383217)
chr5 (557-619)||(22629516-22629579)
chr5 (626-663)||(22429172-22429210)
[»] chr1 (73 HSPs)
chr1 (560-693)||(6002240-6002374)
chr1 (560-673)||(49284412-49284525)
chr1 (560-693)||(6002810-6002945)
chr1 (580-693)||(49284972-49285086)
chr1 (560-663)||(39691948-39692051)
chr1 (557-663)||(28634105-28634211)
chr1 (557-663)||(48104678-48104784)
chr1 (560-663)||(9347129-9347232)
chr1 (560-663)||(20480171-20480273)
chr1 (560-663)||(26814697-26814800)
chr1 (560-663)||(26815067-26815170)
chr1 (557-663)||(46823843-46823949)
chr1 (557-663)||(50430029-50430135)
chr1 (560-663)||(47955309-47955413)
chr1 (560-663)||(27172119-27172221)
chr1 (560-663)||(32162991-32163094)
chr1 (560-663)||(48105064-48105167)
chr1 (560-663)||(50526420-50526523)
chr1 (560-663)||(50615569-50615671)
chr1 (560-663)||(50623397-50623499)
chr1 (557-663)||(42611562-42611668)
chr1 (560-663)||(13918449-13918552)
chr1 (560-663)||(21687028-21687131)
chr1 (560-663)||(28633723-28633826)
chr1 (560-663)||(44911028-44911131)
chr1 (557-663)||(42611185-42611291)
chr1 (560-663)||(999473-999575)
chr1 (560-663)||(6703842-6703945)
chr1 (560-663)||(9347499-9347601)
chr1 (557-663)||(22149649-22149753)
chr1 (557-635)||(999112-999189)
chr1 (560-664)||(19008697-19008801)
chr1 (560-647)||(31848158-31848243)
chr1 (626-693)||(48191302-48191369)
chr1 (560-663)||(27172490-27172592)
chr1 (560-663)||(46824226-46824329)
chr1 (560-619)||(48190774-48190833)
chr1 (560-663)||(49317755-49317857)
chr1 (560-663)||(49318114-49318216)
chr1 (560-663)||(20371300-20371403)
chr1 (560-663)||(33085674-33085775)
chr1 (626-693)||(48190811-48190879)
chr1 (558-652)||(1176837-1176932)
chr1 (560-663)||(4692381-4692484)
chr1 (560-663)||(6703463-6703566)
chr1 (560-619)||(8108985-8109044)
chr1 (560-663)||(13918815-13918918)
chr1 (560-647)||(47955572-47955659)
chr1 (557-647)||(8108721-8108810)
chr1 (557-663)||(44911385-44911491)
chr1 (560-618)||(48191348-48191406)
chr1 (561-663)||(50949513-50949615)
chr1 (560-663)||(17518551-17518652)
chr1 (560-635)||(20371043-20371116)
chr1 (560-632)||(20480591-20480662)
chr1 (557-664)||(31847895-31848002)
chr1 (560-663)||(41082912-41083015)
chr1 (560-633)||(49318421-49318493)
chr1 (591-663)||(50429690-50429762)
chr1 (560-647)||(17518306-17518392)
chr1 (560-663)||(21687415-21687517)
chr1 (560-647)||(22149406-22149490)
chr1 (590-663)||(44224067-44224140)
chr1 (560-611)||(13589659-13589709)
chr1 (560-611)||(41083211-41083261)
chr1 (560-606)||(50615243-50615289)
chr1 (560-606)||(50623071-50623117)
chr1 (560-613)||(47498493-47498545)
chr1 (584-663)||(24671283-24671360)
chr1 (560-635)||(47498304-47498377)
chr1 (557-633)||(50949161-50949237)
chr1 (557-611)||(1177018-1177072)
chr1 (585-627)||(32162757-32162799)
[»] scaffold0460 (2 HSPs)
scaffold0460 (560-663)||(333-436)
scaffold0460 (560-635)||(739-813)
[»] scaffold0802 (2 HSPs)
scaffold0802 (560-663)||(1367-1471)
scaffold0802 (560-647)||(1121-1208)
[»] scaffold0110 (2 HSPs)
scaffold0110 (560-663)||(45754-45857)
scaffold0110 (560-647)||(45540-45626)
[»] scaffold0017 (2 HSPs)
scaffold0017 (560-663)||(185222-185325)
scaffold0017 (560-663)||(184842-184945)
[»] scaffold0319 (2 HSPs)
scaffold0319 (560-663)||(6644-6747)
scaffold0319 (560-647)||(6397-6485)
[»] scaffold0192 (1 HSPs)
scaffold0192 (560-663)||(25316-25420)
[»] scaffold0041 (2 HSPs)
scaffold0041 (560-663)||(38643-38746)
scaffold0041 (589-663)||(38283-38357)
[»] scaffold0029 (1 HSPs)
scaffold0029 (560-663)||(9908-10012)
[»] scaffold0001 (4 HSPs)
scaffold0001 (560-646)||(438933-439019)
scaffold0001 (557-610)||(183364-183416)
scaffold0001 (560-647)||(439165-439250)
scaffold0001 (560-653)||(183621-183713)
[»] scaffold0069 (2 HSPs)
scaffold0069 (560-663)||(50454-50557)
scaffold0069 (560-635)||(50078-50151)
[»] scaffold0002 (1 HSPs)
scaffold0002 (560-663)||(411926-412028)
[»] scaffold0176 (2 HSPs)
scaffold0176 (560-635)||(19624-19698)
scaffold0176 (560-623)||(20031-20094)
[»] scaffold1221 (2 HSPs)
scaffold1221 (557-609)||(1786-1837)
scaffold1221 (560-613)||(1514-1566)
[»] scaffold0535 (1 HSPs)
scaffold0535 (560-659)||(10015-10114)
[»] scaffold0015 (2 HSPs)
scaffold0015 (576-663)||(16870-16960)
scaffold0015 (560-647)||(17119-17206)
[»] scaffold0035 (1 HSPs)
scaffold0035 (558-611)||(73087-73141)
[»] scaffold0598 (1 HSPs)
scaffold0598 (560-609)||(6610-6659)
[»] scaffold0376 (1 HSPs)
scaffold0376 (560-613)||(7458-7510)


Alignment Details
Target: chr3 (Bit Score: 404; Significance: 0; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 27 - 545
Target Start/End: Complemental strand, 31111594 - 31111056
Alignment:
Q  27 atataccagttccttgattagatgcagttatagatttacaattaaatactggcttaagtggcagtggaatcataatat------------tactcgtatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||    
T  31111594 atataccagttccttgattagatgcagttatagatttacaattaaatactggcttaagtggcagtggaatcataatatgcatcataatattactcgtatt 31111495  T
Q  115 ttagtatattggaagtgttcaacaagaaatgaagattctttataaaaggtatttccagatatcataaaaaattagtagatacatacaatttgaaagacta 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31111494 ttagtatattggaagtgttcaacaagaaatgaagattctttataaaaggtatttccagatatcataaaaaattagtagatacatacaatttgtaagacta 31111395  T
Q  215 actctgttttcattctcaaaatggaatgaaggggtaaaagaaggctacgagttatatttaccggaggctatga-tttgtcaaattaatttggatggtttt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  31111394 actctgttttcattctcaaaatggaatgaaggggtaaaagaaggctacgagttatatttaccggaggctatgattttgtcaaattaattgggatggtttt 31111295  T
Q  314 ctaatagacatctcaaaatagtgggtcaaaatcatctccgtttataaaccgatcaagagattagaatgtgatcaaatgaaattaaggtgtttattgaaca 413  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||    
T  31111294 ctaatagacatcttaaaatagtgggtcaaaatcatctccatttataaaccgatcaagagattacaatatgatcaaatgaaattaaggtgcttattaaaca 31111195  T
Q  414 actttctttaatctgagtcccaagttttactcaagagcttgtgcc-------ttgaaatgattcactagtcaccataaatgcgttaatgaagtattaatt 506  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||       |||||||||| |||||| |||||||||||||||||| |||||||||||    
T  31111194 actttctttaatttgagtcccaagttttacacaagagcttgtgcctggaaaattgaaatgatccactagccaccataaatgcgttaattaagtattaatt 31111095  T
Q  507 ttctttaacgaaatcaagtactattattacattgacttc 545  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  31111094 ttctttaacgaagtcaagtactactattacattgacttc 31111056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 557 - 693
Target Start/End: Complemental strand, 1928487 - 1928351
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||| ||| |||||||| |||    
T  1928487 ggtttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctatccttttcccctttt 1928389  T
Q  657 ctgatttgga-ggcccccatgtgttttagtgatgatgt 693  Q
    ||| |||| | ||||||||| |||||||||||||||||    
T  1928388 ctggtttgaagggcccccatatgttttagtgatgatgt 1928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 8314016 - 8314119
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||| ||| |||||||||||||||    
T  8314016 ttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttccccctttctg 8314115  T
Q  660 attt 663  Q
    ||||    
T  8314116 attt 8314119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 42673346 - 42673244
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  42673346 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 42673248  T
Q  660 attt 663  Q
    ||||    
T  42673247 attt 42673244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 48159900 - 48160003
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  48159900 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48159999  T
Q  660 attt 663  Q
    ||||    
T  48160000 attt 48160003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 53687891 - 53687994
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| | ||| ||  |||||||||||||||    
T  53687891 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttccccctttctg 53687990  T
Q  660 attt 663  Q
    ||||    
T  53687991 attt 53687994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 27238954 - 27238848
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| || ||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  27238954 ggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttcccccttt 27238855  T
Q  657 ctgattt 663  Q
    |||||||    
T  27238854 ctgattt 27238848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 10293611 - 10293715
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||| ||||  |||||||||||||||||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  10293611 ttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 10293710  T
Q  659 gattt 663  Q
    |||||    
T  10293711 gattt 10293715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 20969070 - 20968967
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  20969070 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc-tttttttttttgagcgattttgcaccccatctttttgccccctttct 20968972  T
Q  659 gattt 663  Q
    |||||    
T  20968971 gattt 20968967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 22429161 - 22429264
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||||| ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||  ||| ||  |||||||||||||||    
T  22429161 ttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttctg 22429260  T
Q  660 attt 663  Q
    ||||    
T  22429261 attt 22429264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 40848524 - 40848626
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  40848524 ttaattgcacttttc-cccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 40848622  T
Q  660 attt 663  Q
    ||||    
T  40848623 attt 40848626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 48160384 - 48160281
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| | |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  48160384 ttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctg 48160285  T
Q  660 attt 663  Q
    ||||    
T  48160284 attt 48160281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 3353131 - 3353231
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||  | ||| ||  |||||||||||||||    
T  3353131 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt--ccccctatagttttccccctttctg 3353227  T
Q  660 attt 663  Q
    ||||    
T  3353228 attt 3353231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 676
Target Start/End: Original strand, 42672981 - 42673096
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||  |||||||||||| ||    
T  42672981 ttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttatg 42673079  T
Q  660 atttggaggcccccatg 676  Q
    ||||   ||||||||||    
T  42673080 attttatggcccccatg 42673096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 21896546 - 21896459
Alignment:
Q  576 cccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||| |||| ||| ||| ||||||    
T  21896546 cccctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttttcccatttttgattt 21896459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 22429646 - 22429544
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| | | |||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  22429646 ttaattgcactttcc-ctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctg 22429548  T
Q  660 attt 663  Q
    ||||    
T  22429547 attt 22429544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 27238468 - 27238571
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||| ||||||| | |||||  |||| ||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  27238468 ttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctg 27238567  T
Q  660 attt 663  Q
    ||||    
T  27238568 attt 27238571  T

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Target: chr3; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 40849012 - 40848909
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| || ||||  |||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||  ||||| |||||||||    
T  40849012 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcaccctttctg 40848913  T
Q  660 attt 663  Q
    ||||    
T  40848912 attt 40848909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 47666386 - 47666283
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||| ||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  47666386 ttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 47666287  T
Q  660 attt 663  Q
    ||||    
T  47666286 attt 47666283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 26007673 - 26007567
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||  |||||||  |||| ||||||| |||||||||||  |||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  26007673 ggtttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctatagttttcccccttt 26007574  T
Q  657 ctgattt 663  Q
    |||||||    
T  26007573 ctgattt 26007567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 557 - 635
Target Start/End: Original strand, 53766163 - 53766241
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    |||||||||||||||||  | |||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53766163 ggtttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 53766241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 9026736 - 9026839
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat-atttttaaacgagcgattttgcaccccatctttttccccctt 655  Q
    |||||||||||| ||||| | |||||||||||| |||||||| |||||||||||| | ||||||    ||||||||||||||||||||||||||||||||    
T  9026736 ggtttaattgcatttttc-ctcctatcttttgttaattgtgcaattttgcacccctttatttttt---gagcgattttgcaccccatctttttccccctt 9026831  T
Q  656 tctgattt 663  Q
    ||||||||    
T  9026832 tctgattt 9026839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 36180559 - 36180660
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||| ||||  ||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||||  ||| ||  |||||||||||||||    
T  36180559 ttaattgcacatttc--ccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttccccctttctg 36180656  T
Q  660 attt 663  Q
    ||||    
T  36180657 attt 36180660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 10348850 - 10348747
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  | | |||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||||||||     
T  10348850 ttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttcta 10348751  T
Q  660 attt 663  Q
    ||||    
T  10348750 attt 10348747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 26007185 - 26007287
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| | | ||  ||||||  |||||||    
T  26007185 ttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttccatctttctg 26007283  T
Q  660 attt 663  Q
    ||||    
T  26007284 attt 26007287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 579 - 693
Target Start/End: Original strand, 28702299 - 28702410
Alignment:
Q  579 ctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggcccccatgtg 678  Q
    |||||||||||||||| ||||||||||||| ||||||||||||  ||| |||||||||| | ||| |||  ||||||||||||||| ||||||| ||||     
T  28702299 ctatcttttgtcaattatgcgattttgcactccatatttttaattgagtgattttgcacacaatccttt--cccctttctgatttgaaggcccctatgt- 28702395  T
Q  679 ttttagtgatgatgt 693  Q
    |||| ||||||||||    
T  28702396 ttttggtgatgatgt 28702410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 53688353 - 53688251
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| | |||||||  |||| ||||||||||||||||||| ||||| ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  53688353 ttaattgcacttt-ctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttccccctttctg 53688255  T
Q  660 attt 663  Q
    ||||    
T  53688254 attt 53688251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 3353604 - 3353500
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||| ||||||||||| |||||||  |||| |||||||||||||||||||| |||| |||||||||||||||||||| ||| ||   |||||||||||    
T  3353604 ggtttagttgcacttttc-cccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat-agtttcccccttt 3353507  T
Q  657 ctgattt 663  Q
    |||||||    
T  3353506 ctgattt 3353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 561 - 658
Target Start/End: Original strand, 4947263 - 4947362
Alignment:
Q  561 taattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc--ccatatttttaaacgagcgattttgcaccccatctttttccccctttct 658  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||  |  |||||||   ||||| |||||||||||||||||||| | |||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccctctctattttttttcgagcaattttgcaccccatctttttgctcctttct 4947362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 577 - 685
Target Start/End: Original strand, 10771523 - 10771629
Alignment:
Q  577 ccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggcccccatg 676  Q
    ||||||||||||||||||||||||||||  || |||| ||||||| ||||||||||| || || ||| ||||  ||||||||| |||| |||||||||||    
T  10771523 ccctatcttttgtcaattgtgcgattttttactccatgtttttaaccgagcgattttaca-cctatcatttt-tccctttctggtttgaaggcccccatg 10771620  T
Q  677 tgttttagt 685  Q
    |||||||||    
T  10771621 tgttttagt 10771629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 659
Target Start/End: Complemental strand, 47871172 - 47871073
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc-atatttttaaacgagcgattttgcaccccatctttttccccctttct 658  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| |  |||||    ||||||||||||||||||||||||||||| |||||    
T  47871172 ttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccccacttttttttttgagcgattttgcaccccatctttttccccttttct 47871074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 10293960 - 10293873
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||||     |||||||||||||||| |||||||    
T  10293960 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 10293873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 10348482 - 10348585
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||||||||||| | |||||||| |||||| |||||||||||||||||||  ||| ||  |||| ||||||||||    
T  10348482 ttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctatagtttttcccctttctg 10348581  T
Q  660 attt 663  Q
    ||||    
T  10348582 attt 10348585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 20968721 - 20968808
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  20968721 ttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 20968808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 24485510 - 24485408
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||  | ||||||||||||     
T  24485510 ttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagtattccccctttcta 24485412  T
Q  660 attt 663  Q
    ||||    
T  24485411 attt 24485408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 585 - 663
Target Start/End: Original strand, 24485049 - 24485127
Alignment:
Q  585 tttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||| ||  |||| ||||||||||||||    
T  24485049 tttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctgattt 24485127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 560 - 633
Target Start/End: Complemental strand, 36181041 - 36180968
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgatttt 633  Q
    |||||||||||||||  ||||||  ||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  36181041 ttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgatttt 36180968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 590 - 663
Target Start/End: Complemental strand, 42456216 - 42456144
Alignment:
Q  590 caattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||   ||||||||||||||||||    
T  42456216 caattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat-agtttccccctttctgattt 42456144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 626 - 693
Target Start/End: Original strand, 1927812 - 1927878
Alignment:
Q  626 gcgattttgcaccccatctttttccccctttctgatttggaggcccccatgtgttttagtgatgatgt 693  Q
    |||||||||||||| |||||||||||| |||||| |||| |||||||||||| |||||||||||||||    
T  1927812 gcgattttgcaccctatctttttcccc-tttctggtttgaaggcccccatgtattttagtgatgatgt 1927878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 18875242 - 18875155
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||  |||||||||||||  |||||| |||||||||||||| | |||||    ||||||||||||||||||||||||    
T  18875242 ttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 18875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 44007970 - 44008073
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  ||||||  ||| |||||||||| | |||||| |  ||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  44007970 ttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccctttctg 44008069  T
Q  660 attt 663  Q
    ||||    
T  44008070 attt 44008073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 44008451 - 44008349
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||| || |||  |||| ||||||||| |||||||||| |||| |||||||||||| ||||| | ||| ||  ||||| |||||||||    
T  44008451 ttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctccctttctg 44008353  T
Q  660 attt 663  Q
    ||||    
T  44008352 attt 44008349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 45060922 - 45060863
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||| || |||||    
T  45060922 ttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccctatcttttt 45060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 618
Target Start/End: Complemental strand, 14016017 - 14015957
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttt 618  Q
    ||||||||||||||||||| || |||||||||  ||||||||||||||||||||||| ||||    
T  14016017 ggtttaattgcacttttcatcc-tatcttttgctaattgtgcgattttgcaccccatctttt 14015957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 620
Target Start/End: Original strand, 42455793 - 42455853
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttta 620  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||| ||| ||| |||||    
T  42455793 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccccctatagtttta 42455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 1927775 - 1927834
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    |||||||||| |||| ||||||||||||| ||||| ||||||||||||||| || |||||    
T  1927775 ttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccctatcttttt 1927834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 47665914 - 47666017
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  ||| |||  ||||||||||||||||||||||||| |||  ||| ||||||| |||||| |  || ||  |||||||||||| ||    
T  47665914 ttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctatagttttccccctttttg 47666013  T
Q  660 attt 663  Q
    ||||    
T  47666014 attt 47666017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 558 - 611
Target Start/End: Complemental strand, 1101143 - 1101090
Alignment:
Q  558 gtttaattgcacttttcacccctatctttt-gtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  1101143 gtttaattgcacttttg-cccctatctttttgtcaattgtgcgattttgcacccc 1101090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 610
Target Start/End: Complemental strand, 8315132 - 8315083
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    ||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  8315132 ttaattgcactttcc-cccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 558 - 611
Target Start/End: Complemental strand, 13657675 - 13657621
Alignment:
Q  558 gtttaattgcacttttcacccctatctttt-gtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||||  |||||||||||| | ||||||||||||||||||||||    
T  13657675 gtttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 613
Target Start/End: Complemental strand, 3644834 - 3644781
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat 613  Q
    ||||||||| ||||| ||| ||| |||||| |||||||||||||||||||||||    
T  3644834 ttaattgcatttttcccccttattttttgttaattgtgcgattttgcaccccat 3644781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 14015694 - 14015746
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    |||||||||||||||||  ||  |||||||||||||| |||||||||||||||    
T  14015694 ggtttaattgcacttttttcctttatcttttgtcaatcgtgcgattttgcacc 14015746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 610
Target Start/End: Original strand, 18874887 - 18874935
Alignment:
Q  562 aattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    ||||||||||||  |||||||||||||  ||||||||||||||||||||    
T  18874887 aattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 611
Target Start/End: Original strand, 26540693 - 26540744
Alignment:
Q  559 tttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    |||||||||||||||  ||||||| ||||||||||||||| ||||||||||||    
T  26540693 tttaattgcacttttg-cccctattttttgtcaattgtgcaattttgcacccc 26540744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 663
Target Start/End: Original strand, 18874957 - 18874996
Alignment:
Q  625 agcgattttgcaccccatcttttt-ccccctttctgattt 663  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  18874957 agcgattttgcaccccatctttttgccccctttctgattt 18874996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 663
Target Start/End: Original strand, 21895700 - 21895735
Alignment:
Q  628 gattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||||||||||||||||| ||||||||||||||    
T  21895700 gattttgcaccccatcttttttcccctttctgattt 21895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 42627596 - 42627511
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| || ||||||||||  ||||||| ||||||||| ||| | |||||  | ||||||||||||||||||| ||||    
T  42627596 ttaattgcacttttc-cctctatcttttgctaattgtgtgattttgcatccc-tctttttttatgagcgattttgcaccccatttttt 42627511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 611
Target Start/End: Complemental strand, 23630089 - 23630035
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    |||||||||||||||||  | ||||| |||||  |||||||||||||||||||||    
T  23630089 ggtttaattgcactttttcctcctattttttggtaattgtgcgattttgcacccc 23630035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 47870826 - 47870910
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcga-ttttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||  |||||||||||||  |||| ||||| ||||||||||| | |||||    ||||||||||||||||||||||||    
T  47870826 ttaattgcacttttt-cccctatcttttgctaattatgcgaattttgcaccccttttttttt---gagcgattttgcaccccatctttt 47870910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 621
Target Start/End: Complemental strand, 53766630 - 53766569
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaa 621  Q
    ||||||||||||||| |||||||  ||||  |||||||| ||||||||||| ||| ||||||    
T  53766630 ttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaa 53766569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 22851393 - 22851527
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  22851393 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccctttctg 22851492  T
Q  660 atttggaggccc-ccatgtgttttagtgatgatgt 693  Q
    |||||||||||| ||||||||||||||||||||||    
T  22851493 atttggaggccctccatgtgttttagtgatgatgt 22851527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 39724099 - 39723965
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39724099 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 39724000  T
Q  660 atttggaggccc-ccatgtgttttagtgatgatgt 693  Q
    |||||||||||| ||||||||||||||||||||||    
T  39723999 atttggaggccctccatgtgttttagtgatgatgt 39723965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 13026638 - 13026772
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13026638 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 13026737  T
Q  660 atttggagg-cccccatgtgttttagtgatgatgt 693  Q
    ||||||||| |||||||||||||||||||||||||    
T  13026738 atttggaggccccccatgtgttttagtgatgatgt 13026772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 3307341 - 3307475
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  3307341 ttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgcaccccatctttttctccctttctg 3307440  T
Q  660 atttggaggccccc-atgtgttttagtgatgatgt 693  Q
    |||||||||||||| ||||||||||||||||||||    
T  3307441 atttggaggccccctatgtgttttagtgatgatgt 3307475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 9823412 - 9823278
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9823412 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 9823313  T
Q  660 atttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    |||||||||| |||||||  |||||||||||||||    
T  9823312 atttggaggccccccatgaattttagtgatgatgt 9823278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 13027335 - 13027219
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13027335 ggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttcccccttt 13027236  T
Q  657 ctgatttggaggccccc 673  Q
    |||||||||||||||||    
T  13027235 ctgatttggaggccccc 13027219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 9822751 - 9822885
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  9822751 ttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccatatctttttccccctttctg 9822850  T
Q  660 atttggaggcc-cccatgtgttttagtgatgatgt 693  Q
    ||||||||||| |||||||||||||||||| ||||    
T  9822851 atttggaggccacccatgtgttttagtgatcatgt 9822885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 570 - 693
Target Start/End: Original strand, 39723415 - 39723539
Alignment:
Q  570 ttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgatttggagg- 668  Q
    |||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  39723415 ttttcacctctatcttttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggc 39723514  T
Q  669 cccccatgtgttttagtgatgatgt 693  Q
    |||||||||||||||||||||||||    
T  39723515 cccccatgtgttttagtgatgatgt 39723539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 13937440 - 13937307
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||    
T  13937440 ttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgcacctcatccttttccccctttctg 13937341  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
     |||| ||||||||||||||||||||||||||||    
T  13937340 gtttgaaggcccccatgtgttttagtgatgatgt 13937307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 560 - 690
Target Start/End: Original strand, 13936726 - 13936853
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13936726 ttaattgcacttttc-cccctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-cccctttctg 13936823  T
Q  660 atttggaggcccccatgtgttttagtgatga 690  Q
    ||||| ||| | |||| ||||||||||||||    
T  13936824 atttgaagg-ctccatatgttttagtgatga 13936853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 576 - 693
Target Start/End: Original strand, 6092794 - 6092911
Alignment:
Q  576 cccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggcccccat 675  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||| |||| |||||  ||||||||||    
T  6092794 cccctatcttttgtcaattgtgcgattttgcatcccatatttttaattgaacgattttgcaccccatctttttccccttttcagatttaaaggcccccat 6092893  T
Q  676 gtgttttagtgatgatgt 693  Q
    ||||||||||||||||||    
T  6092894 gtgttttagtgatgatgt 6092911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 557 - 693
Target Start/End: Original strand, 15042145 - 15042281
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||| | ||| ||||||||| |||||||| |||||||||||| ||  ||||||| |||||||||||||| ||||| ||||||||||||    
T  15042145 ggtttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttgcacgccatcattttcccccttt 15042244  T
Q  657 ctgatttggaggcccccatgtgttttagtgatgatgt 693  Q
    |||||||  ||| |||| ||||||| |||||||||||    
T  15042245 ctgatttcaaggtccccgtgtgtttcagtgatgatgt 15042281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 41662454 - 41662350
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||| |  ||||||||||||||||||||||||| ||||||||||    
T  41662454 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctttct 41662355  T
Q  659 gattt 663  Q
    |||||    
T  41662354 gattt 41662350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 34498122 - 34498227
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||  |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||   |||||||||||    
T  34498122 ggtttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctat-agtttcccccttt 34498220  T
Q  657 ctgattt 663  Q
    |||||||    
T  34498221 ctgattt 34498227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 15156236 - 15156132
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||     |||||||||||||||||||||||| ||||||||||    
T  15156236 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccctttct 15156137  T
Q  659 gattt 663  Q
    |||||    
T  15156136 gattt 15156132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 24473819 - 24473716
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||| ||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||| ||  |||||||||||||||    
T  24473819 ttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctg 24473720  T
Q  660 attt 663  Q
    ||||    
T  24473719 attt 24473716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 37396711 - 37396814
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| | ||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  37396711 ttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 37396810  T
Q  660 attt 663  Q
    ||||    
T  37396811 attt 37396814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 765737 - 765841
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||||     
T  765737 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttca 765836  T
Q  659 gattt 663  Q
    |||||    
T  765837 gattt 765841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 43245874 - 43245978
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||  |||||||||||||  ||||||||||||||||||||| | ||||| |  ||||||||||||||||||||||||| ||||||||||    
T  43245874 ttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctttct 43245973  T
Q  659 gattt 663  Q
    |||||    
T  43245974 gattt 43245978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 6199147 - 6199044
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  ||||||  |||| |||||||||||||||||| |||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  6199147 ttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccctttctg 6199048  T
Q  660 attt 663  Q
    ||||    
T  6199047 attt 6199044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 17431290 - 17431393
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||||||||||||||||||| |||| |||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  17431290 ttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttccccctttctg 17431389  T
Q  660 attt 663  Q
    ||||    
T  17431390 attt 17431393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 626 - 693
Target Start/End: Complemental strand, 22851970 - 22851903
Alignment:
Q  626 gcgattttgcaccccatctttttccccctttctgatttggaggcccccatgtgttttagtgatgatgt 693  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22851970 gcgattttgcacctcgtctttttccccctttctgatttggaggcccccatgtgttttagtgatgatgt 22851903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 12281127 - 12281231
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| | | |||||    ||||||||||||||||||||||||| |||||||||     
T  12281127 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctctttttttttgagcgattttgcaccccatctttttgccccctttca 12281226  T
Q  659 gattt 663  Q
    |||||    
T  12281227 gattt 12281231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 15442766 - 15442869
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| ||||||| ||| | |||||||| ||||||||||||||| |||||||||| |||||||||||||| ||| ||||||| |||| ||    
T  15442766 ttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctatccttttcccgctttgtg 15442865  T
Q  660 attt 663  Q
    ||||    
T  15442866 attt 15442869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 34498606 - 34498503
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  ||||  |||||||||||||||||||||||| |||||||| || |||| ||| ||| || ||||||||||||||||    
T  34498606 ttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatttttccccctttctg 34498507  T
Q  660 attt 663  Q
    ||||    
T  34498506 attt 34498503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 37397196 - 37397093
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||| ||||||| |||||||||||||| ||||| ||| ||   ||||||||||||||    
T  37397196 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctatagatttccccctttctg 37397097  T
Q  660 attt 663  Q
    ||||    
T  37397096 attt 37397093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 557 - 635
Target Start/End: Complemental strand, 25439179 - 25439102
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    |||||||||||||||||  |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25439179 ggtttaattgcacttttt-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 25439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 15155886 - 15155973
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  15155886 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 15155973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 20861689 - 20861586
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||  |||||||  | || ||||||||||||||||||||||||| ||||||||||||||||||||  || ||  |||||||||||||||    
T  20861689 ttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttccccctttctg 20861590  T
Q  660 attt 663  Q
    ||||    
T  20861589 attt 20861586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 24473346 - 24473449
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  |||| |||||||| |||||||||||||||| ||||||| |||||||||||| ||| ||  ||| |||||||||||    
T  24473346 ttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctatagtttcccccctttctg 24473445  T
Q  660 attt 663  Q
    ||||    
T  24473446 attt 24473449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 41662524 - 41662627
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||| |||||||||||||||||||| |||| |||||||||||||||||||| ||| ||  ||||| ||||||||     
T  41662524 ttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctccctttcta 41662623  T
Q  660 attt 663  Q
    ||||    
T  41662624 attt 41662627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 15444701 - 15444595
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||  |||||||  |||  ||||||||||||||||||||||||| ||||||||||||||||||   ||| ||  ||||||| ||||    
T  15444701 ggtttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctcttt 15444602  T
Q  657 ctgattt 663  Q
    |||||||    
T  15444601 ctgattt 15444595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 6198661 - 6198764
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  | |  ||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  6198661 ttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccatttctg 6198760  T
Q  660 attt 663  Q
    ||||    
T  6198761 attt 6198764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 37752467 - 37752381
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||| ||||    
T  37752467 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatatttt 37752381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 33727159 - 33727053
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    ||||||||| |||||||| ||  |||  ||||  ||||||||||||||||||  |||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  33727159 ggtttaattacacttttctcctttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttcccccttt 33727060  T
Q  657 ctgattt 663  Q
    |||||||    
T  33727059 ctgattt 33727053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 560 - 648
Target Start/End: Original strand, 37752087 - 37752176
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat-atttttaaacgagcgattttgcaccccatcttttt 648  Q
    ||||||||||||||| ||||||| |||||  |||||||||||||||||||||||  |||||    |||||||||||||||||||||||||    
T  37752087 ttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccatcttttttttttgagcgattttgcaccccatcttttt 37752176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 16928945 - 16929047
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||| | |||||||||||||  ||||||||||||||||||||| | |||||    ||||| ||||||||||||||||||| ||||||||||    
T  16928945 ttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctcttttt-tttgagcg-ttttgcaccccatctttttgccccctttct 16929042  T
Q  659 gattt 663  Q
    |||||    
T  16929043 gattt 16929047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 9623505 - 9623608
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||   | ||||  |||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||| ||  |||||||  ||||||    
T  9623505 ttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctttttctg 9623604  T
Q  660 attt 663  Q
    ||||    
T  9623605 attt 9623608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 12281477 - 12281390
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||||| | |||||    |||||||||| ||||| |||||||    
T  12281477 ttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatctttt 12281390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 16929293 - 16929207
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||    || |||||||||||||||||||||    
T  16929293 ttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctcttttt-tttgaacgattttgcaccccatctttt 16929207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 23123341 - 23123400
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |||||    
T  23123341 ttaattgcacttttccctcctatcttttgtcaattgtgcgattttacaccccatcttttt 23123400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 621
Target Start/End: Original strand, 25438795 - 25438856
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaa 621  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| ||||||    
T  25438795 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa 25438856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 18020137 - 18020053
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||   ||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||    
T  18020137 ttaattgcactttta--ccctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttt 18020053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 34313768 - 34313852
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  34313768 ttaattgcacttttc--ccctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccctatctttt 34313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 43246227 - 43246139
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat-atttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||  ||||||| ||||||||||||| |  |||||    ||||||||||||||||||||||||    
T  43246227 ttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctcttttttttttgagcgattttgcaccccatctttt 43246139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 15043818 - 15043731
Alignment:
Q  576 cccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||||||||| |||||| |||||||||  | ||||| |||||||||||||||||| |||||| |  ||||| || ||||||||||    
T  15043818 cccctatcttttgacaattgcgcgattttgtgctccatagttttaaacgagcgattttacaccccgttcttttctccttttctgattt 15043731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 16169177 - 16169279
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||| || |||  |||| ||||||||| |||||||||| |||| |||||||||||| ||||| | ||| ||  ||||| |||||||||    
T  16169177 ttaattgcacttttcatcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctccctttctg 16169275  T
Q  660 attt 663  Q
    ||||    
T  16169276 attt 16169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 16169658 - 16169555
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  ||||||  ||| |||||||||| | |||||| |  ||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  16169658 ttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccctttctg 16169559  T
Q  660 attt 663  Q
    ||||    
T  16169558 attt 16169555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 663
Target Start/End: Original strand, 37752154 - 37752221
Alignment:
Q  597 gcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttctgattt 663  Q
    ||||||||||||||||| |||||    ||||||||||||||||||||||||| |||||||||||||||    
T  37752154 gcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctttctgattt 37752221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 561 - 611
Target Start/End: Complemental strand, 43162588 - 43162539
Alignment:
Q  561 taattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  43162588 taattgcacttttc-cccctatcttttgtcaatcgtgcgattttgcacccc 43162539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 663
Target Start/End: Complemental strand, 75016 - 74932
Alignment:
Q  579 ctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttctgattt 663  Q
    ||||||||||  ||||||||||||||||||||| | |||||     |||||||||||||||||||||||| |||||||||||||||    
T  75016 ctatcttttgctaattgtgcgattttgcaccccctcttttttttt-agcgattttgcaccccatctttttgccccctttctgattt 74932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 558 - 608
Target Start/End: Complemental strand, 74915 - 74864
Alignment:
Q  558 gtttaattgcacttttcacccctatctttt-gtcaattgtgcgattttgcac 608  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  74915 gtttaattgcacttttgtcccctatctttttgtcaattgtgcgattttgcac 74864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 2856529 - 2856632
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||| | |||||  ||||||  |||| ||||||||||||||||||||||||| ||| |||||  |||||||   ||| ||  |||||||||||||||    
T  2856529 ttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctatagttttccccctttctg 2856628  T
Q  660 attt 663  Q
    ||||    
T  2856629 attt 2856632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 15444214 - 15444317
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| || ||||  |||| ||||||| | ||||| ||  ||||| |||||||||||||||||||| ||| ||  |||||||||||| ||    
T  15444214 ttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctatagttttccccctttatg 15444313  T
Q  660 attt 663  Q
    ||||    
T  15444314 attt 15444317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 647
Target Start/End: Complemental strand, 9465908 - 9465838
Alignment:
Q  577 ccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||| ||||||||||||||||||||| | |||||    |||| |||||||||||||| ||||    
T  9465908 ccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcaattttgcaccccatttttt 9465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 653
Target Start/End: Complemental strand, 3463996 - 3463903
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccc 653  Q
    ||||||||||||||| ||||||| |||||  ||||||||||| ||||||||  |  |||     ||||||||||||||||||||||||| ||||    
T  3463996 ttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccctctcctttgttttgagcgattttgcaccccatctttttacccc 3463903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 22852007 - 22851958
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    ||||||| | |||||| |||||||||||| ||||||||||||||||||||    
T  22852007 ttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 43162237 - 43162285
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  43162237 ttaattgcacttttc-cccctatattttgttaattgtgcgattttgcacc 43162285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 611
Target Start/End: Original strand, 41662110 - 41662161
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    |||||||||| |||  ||| |||||||||| |||||||||||||||||||||    
T  41662110 ttaattgcacattttccccatatcttttgttaattgtgcgattttgcacccc 41662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 647
Target Start/End: Complemental strand, 7127877 - 7127789
Alignment:
Q  562 aattgcacttttcacccctatcttttgtc-aattgtgcgattttgcaccccatatt--tttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||  ||||||||||||  | ||||| | ||||||||||||||| ||  |||  | ||||||||||||||||||||||||    
T  7127877 aattgcacttttaccccctatctttttgctaattgcgtgattttgcaccccatcttcttttttatgagcgattttgcaccccatctttt 7127789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 22786934 - 22786987
Alignment:
Q  558 gtttaattgcacttttcacccctatct-tttgtcaattgtgcgattttgcaccc 610  Q
    ||||||||||||||||  ||| ||||| ||||||| ||||||||||||||||||    
T  22786934 gtttaattgcacttttgccccttatctatttgtcagttgtgcgattttgcaccc 22786987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 2e-60; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 44599492 - 44599626
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44599492 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 44599591  T
Q  660 atttggagg-cccccatgtgttttagtgatgatgt 693  Q
    ||||||||| |||||||||||||||||||||||||    
T  44599592 atttggaggccccccatgtgttttagtgatgatgt 44599626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 13864007 - 13863875
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13864007 ttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 13863909  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
    ||||||||||||| ||||||||||||||||||||    
T  13863908 atttggaggccccgatgtgttttagtgatgatgt 13863875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 13863316 - 13863450
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  13863316 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctctttctg 13863415  T
Q  660 atttggagg-cccccatgtgttttagtgatgatgt 693  Q
    ||||||||| |||||||||||||||||||||||||    
T  13863416 atttggaggccccccatgtgttttagtgatgatgt 13863450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 560 - 673
Target Start/End: Complemental strand, 44600186 - 44600073
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44600186 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 44600087  T
Q  660 atttggaggccccc 673  Q
    ||||||||||||||    
T  44600086 atttggaggccccc 44600073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 8643817 - 8643684
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  8643817 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgcaccccatctttttccccctttctg 8643718  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
    ||||| ||||||| ||||||||||| ||||||||    
T  8643717 atttgaaggcccctatgtgttttagcgatgatgt 8643684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 46816362 - 46816229
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  || |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  46816362 ttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttgtaccccatcatttttcccctttctg 46816263  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
     |||| |||||||||| | ||||| |||||||||    
T  46816262 gtttgaaggcccccatatattttaatgatgatgt 46816229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 18863967 - 18864073
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  18863967 ggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 18864066  T
Q  657 ctgattt 663  Q
    |||||||    
T  18864067 ctgattt 18864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 20419375 - 20419272
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  20419375 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 20419276  T
Q  660 attt 663  Q
    ||||    
T  20419275 attt 20419272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 22740159 - 22740262
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  22740159 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 22740258  T
Q  660 attt 663  Q
    ||||    
T  22740259 attt 22740262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 3205144 - 3205041
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||| ||| ||  |||||||||||||||    
T  3205144 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttctg 3205045  T
Q  660 attt 663  Q
    ||||    
T  3205044 attt 3205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 10533037 - 10533140
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  10533037 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 10533136  T
Q  660 attt 663  Q
    ||||    
T  10533137 attt 10533140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 17156970 - 17157073
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||  |||||||||||||||    
T  17156970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctg 17157069  T
Q  660 attt 663  Q
    ||||    
T  17157070 attt 17157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 37888836 - 37888939
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  37888836 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 37888935  T
Q  660 attt 663  Q
    ||||    
T  37888936 attt 37888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 20418888 - 20418994
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||| ||||||    
T  20418888 ggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcacccttt 20418987  T
Q  657 ctgattt 663  Q
    |||||||    
T  20418988 ctgattt 20418994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 13744283 - 13744181
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||| ||    
T  13744283 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttttg 13744185  T
Q  660 attt 663  Q
    ||||    
T  13744184 attt 13744181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 37889310 - 37889207
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||| |||||||||    
T  37889310 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 37889211  T
Q  660 attt 663  Q
    ||||    
T  37889210 attt 37889207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 37972447 - 37972344
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||||||| |    
T  37972447 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttcag 37972348  T
Q  660 attt 663  Q
    ||||    
T  37972347 attt 37972344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 3687707 - 3687604
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  3687707 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttttgccccctttct 3687609  T
Q  659 gattt 663  Q
    |||||    
T  3687608 gattt 3687604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 9035344 - 9035240
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttc-cccctttct 658  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||| |||||||||    
T  9035344 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccctttct 9035245  T
Q  659 gattt 663  Q
    |||||    
T  9035244 gattt 9035240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 9412376 - 9412272
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||||     
T  9412376 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttca 9412277  T
Q  659 gattt 663  Q
    |||||    
T  9412276 gattt 9412272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 37971963 - 37972066
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||| |  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  37971963 ttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctg 37972062  T
Q  660 attt 663  Q
    ||||    
T  37972063 attt 37972066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 558 - 652
Target Start/End: Complemental strand, 22740643 - 22740550
Alignment:
Q  558 gtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccc 652  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||    
T  22740643 gtttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttcccc 22740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 584 - 693
Target Start/End: Original strand, 46815195 - 46815304
Alignment:
Q  584 ttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggcccccatgtgtttta 683  Q
    ||||||||||||||| || ||||| | ||||||||||||| | |||| |||||| ||||| |||||||||||||||||||| | || ||||| |||||||    
T  46815195 ttttgtcaattgtgcaatcttgcatctcatatttttaaacaaacgatcttgcactccatcattttccccctttctgatttgaatgctcccatatgtttta 46815294  T
Q  684 gtgatgatgt 693  Q
    ||||||||||    
T  46815295 gtgatgatgt 46815304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 9034870 - 9034974
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc-atatttttaaacgagcgattttgcaccccatctttttccccctttct 658  Q
    ||||||||||||||| |||||||  |||| ||||||||||||| |||||||| ||| |||||||||||||||||||| ||| ||  ||||||||||||||    
T  9034870 ttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttccccctttct 9034969  T
Q  659 gattt 663  Q
    |||||    
T  9034970 gattt 9034974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 13741560 - 13741663
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| |||||||  |||  ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||| |||||||    
T  13741560 ttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccactttctg 13741659  T
Q  660 attt 663  Q
    ||||    
T  13741660 attt 13741663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 29292925 - 29293028
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||||| |||||  ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  29292925 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 29293024  T
Q  660 attt 663  Q
    ||||    
T  29293025 attt 29293028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 38826964 - 38826861
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| |||||||  ||||||||||||||||||||||||| |||| |||||||||| || |||||| ||| ||  |||||||||||||||    
T  38826964 ttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttccccctttctg 38826865  T
Q  660 attt 663  Q
    ||||    
T  38826864 attt 38826861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 42419082 - 42418976
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc-atatttttaaacgagcgattttgcaccccatctttttccccctt 655  Q
    |||||||||||||||||| |||||||  |||| |||||||||| ||||||||||| ||| |||||||||||||||||||| ||| ||  |||||||||||    
T  42419082 ggtttaattgcacttttc-cccctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttccccctt 42418984  T
Q  656 tctgattt 663  Q
    ||||||||    
T  42418983 tctgattt 42418976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 48359323 - 48359424
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| | ||| ||   ||||||||||||||    
T  48359323 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat-agtttccccctttctg 48359420  T
Q  660 attt 663  Q
    ||||    
T  48359421 attt 48359424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 18864452 - 18864350
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||| ||||||| |||||||  |||| |||||||||||||||||||| |||| ||||||| |||||||||||| ||| ||  |||||||||||||||    
T  18864452 ttaattgtacttttc-cccctatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttccccctttctg 18864354  T
Q  660 attt 663  Q
    ||||    
T  18864353 attt 18864350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 29293397 - 29293294
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| |||||||  |||| ||||||||||||||||||| ||||  ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  29293397 ttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 29293298  T
Q  660 attt 663  Q
    ||||    
T  29293297 attt 29293294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 3204672 - 3204773
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| |  ||||||  |||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||| ||  ||||||| |||||||    
T  3204672 ttaattgcactttcc--ccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctctttctg 3204769  T
Q  660 attt 663  Q
    ||||    
T  3204770 attt 3204773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 36527849 - 36527746
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| | | |||  |||| ||||| |||||||||||| |||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  36527849 ttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccctttctg 36527750  T
Q  660 attt 663  Q
    ||||    
T  36527749 attt 36527746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 36527384 - 36527489
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||  |||||||  |||||||||||||||||||||||||||||| |||||||||| | ||||| | ||  ||  |||| |||||||    
T  36527384 ggtttaattgcacttttt-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttccccttatagtttttccccttt 36527482  T
Q  657 ctgattt 663  Q
    |||||||    
T  36527483 ctgattt 36527489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 561 - 663
Target Start/End: Complemental strand, 48359707 - 48359606
Alignment:
Q  561 taattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctga 660  Q
    |||||||||||||  |||||||  |||  |||||||||||||||||||| |||| ||| |||||||||||||||| ||| ||  ||||||||||||||||    
T  48359707 taattgcacttttt-cccctatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccctttctga 48359609  T
Q  661 ttt 663  Q
    |||    
T  48359608 ttt 48359606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 9412026 - 9412113
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||||| | |||||    |||||||||| ||||| |||||||    
T  9412026 ttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatctttt 9412113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 42418594 - 42418697
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||| |||||||| |||||||  ||||  ||||||||||||||| | || ||| |||||||||||||||||||| ||| ||  ||||||||||||||     
T  42418594 ttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttccccctttcta 42418693  T
Q  660 attt 663  Q
    ||||    
T  42418694 attt 42418697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 557 - 647
Target Start/End: Complemental strand, 27096395 - 27096306
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| | || ||    ||||||||||||||||||| ||||    
T  27096395 ggtttaattgcacttttc-cccctatcttttgtcaattgtgtgattttgcatcccctcttcttttttgagcgattttgcaccccatatttt 27096306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 557 - 647
Target Start/End: Original strand, 27181908 - 27181997
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| | || ||    ||||||||||||||||||| ||||    
T  27181908 ggtttaattgcacttttc-cccctatcttttgtcaattgtgtgattttgcatcccctcttcttttttgagcgattttgcaccccatatttt 27181997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 560 - 620
Target Start/End: Complemental strand, 5349781 - 5349724
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttta 620  Q
    |||||||||||||   |||||||||||||| ||||||||||||||||||||||| ||||||    
T  5349781 ttaattgcacttt---cccctatcttttgttaattgtgcgattttgcaccccatcttttta 5349724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 560 - 640
Target Start/End: Complemental strand, 8953939 - 8953863
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcacccc 640  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||| | ||||| |   ||||||||||||||||    
T  8953939 ttaattgcacttttc-cccctatcttttgttaattgtgcaattttgcaccccctctttttta---agcgattttgcacccc 8953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 3687356 - 3687445
Alignment:
Q  560 ttaattgcacttttcacccc-tatcttttgtcaattgtgcgattttgcaccccat-atttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||||||||| |  |||||    |||||||||||||||| |||||||    
T  3687356 ttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccctatctttt 3687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 611
Target Start/End: Complemental strand, 13772952 - 13772901
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||| |||||||| ||||  |||||||||||||||||||||    
T  13772952 ttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacccc 13772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 23686768 - 23686683
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||  |||||||||||||  ||||||||||||||| ||||| | |||||    ||||||||||||||||||||||||    
T  23686768 ttaattgcactttttccccctatcttttgctaattgtgcgattttg-acccc-tcttttttttggagcgattttgcaccccatctttt 23686683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 29291809 - 29291896
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||   ||||||||||||  |||| |||||||||||||||| | |||||    |||||||||| |||||||||||||    
T  29291809 ttaattgcactttttctccctatcttttgataattatgcgattttgcaccccctcttttttttagagcgattttacaccccatctttt 29291896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 647
Target Start/End: Original strand, 5349489 - 5349550
Alignment:
Q  583 cttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||    
T  5349489 cttttgttaattgtgcgattttgcacccccttttttt---tgagcgattttgcaccccatctttt 5349550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 610
Target Start/End: Original strand, 6908216 - 6908265
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  6908216 ttaattgcacttttc-cccctatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 618
Target Start/End: Original strand, 13772644 - 13772702
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttt 618  Q
    |||||||||||||||  ||||||||||||  ||||||| ||||||||||||||| ||||    
T  13772644 ttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccatctttt 13772702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 610
Target Start/End: Complemental strand, 38191616 - 38191566
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    ||||||||| |||| ||||||||||||||| |||| |||||||||||||||    
T  38191616 ttaattgcattttttacccctatcttttgttaattatgcgattttgcaccc 38191566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 648
Target Start/End: Original strand, 5735255 - 5735344
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcac-cccatatttttaaacgagcgattttgcaccccatcttttt 648  Q
    ||||||||||||||| ||||||||||| |  |||||||||||||||||| ||  | |||||    ||||||||||||||| |||||||||    
T  5735255 ttaattgcacttttctcccctatctttggctaattgtgcgattttgcactcctttttttttttttgagcgattttgcaccacatcttttt 5735344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 613
Target Start/End: Complemental strand, 30857955 - 30857902
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat 613  Q
    ||||||||||||||  | | ||||||||||||||||||| ||||||||||||||    
T  30857955 ttaattgcacttttgtctcttatcttttgtcaattgtgcaattttgcaccccat 30857902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 580 - 619
Target Start/End: Complemental strand, 35080254 - 35080215
Alignment:
Q  580 tatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  35080254 tatcttttgttaattgtgcgattttgcaccccatcttttt 35080215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 626 - 663
Target Start/End: Complemental strand, 5349747 - 5349709
Alignment:
Q  626 gcgattttgcaccccatcttttt-ccccctttctgattt 663  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5349747 gcgattttgcaccccatctttttaccccctttctgattt 5349709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 605
Target Start/End: Complemental strand, 5735599 - 5735553
Alignment:
Q  559 tttaattgcacttttcacccctatcttttgtcaattgtgcgattttg 605  Q
    |||||||||||||||  |||||||||||| | |||||||||||||||    
T  5735599 tttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 647
Target Start/End: Original strand, 15567026 - 15567079
Alignment:
Q  591 aattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||||||||| |||||||    ||||||||||||||||||||||||    
T  15567026 aattgtgcgattttgcacccc-tattttttt--gagcgattttgcaccccatctttt 15567079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 621
Target Start/End: Complemental strand, 16199028 - 16198967
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaa 621  Q
    ||||||||||||||  ||  |||  |||| ||||||||||||||||||||||||| ||||||    
T  16199028 ttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttttaa 16198967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 18925065 - 18925114
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    |||||||||||||||  ||||||||||||  |||||||| ||||||||||    
T  18925065 ttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 2e-60; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 33829687 - 33829553
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33829687 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 33829588  T
Q  660 atttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    |||||||||| ||||||||||||||||||||||||    
T  33829587 atttggaggccccccatgtgttttagtgatgatgt 33829553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 560 - 673
Target Start/End: Original strand, 33828993 - 33829106
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33828993 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 33829092  T
Q  660 atttggaggccccc 673  Q
    ||||||||||||||    
T  33829093 atttggaggccccc 33829106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 7654599 - 7654496
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||| || ||||| ||| ||  |||||||||||||||    
T  7654599 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttccccctttctg 7654500  T
Q  660 attt 663  Q
    ||||    
T  7654499 attt 7654496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 10087909 - 10087806
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||| |  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  10087909 ttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 10087810  T
Q  660 attt 663  Q
    ||||    
T  10087809 attt 10087806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 33974350 - 33974247
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  33974350 ttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 33974251  T
Q  660 attt 663  Q
    ||||    
T  33974250 attt 33974247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 3404040 - 3403936
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  3404040 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 3403941  T
Q  659 gattt 663  Q
    |||||    
T  3403940 gattt 3403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 32734050 - 32733944
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    ||||||||||||||||||  ||||||  |||| |||||||||||||||||| |||||| |||||||||||||||||||| ||| ||  ||||| ||||||    
T  32734050 ggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctcccttt 32733951  T
Q  657 ctgattt 663  Q
    |||||||    
T  32733950 ctgattt 32733944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 18242207 - 18242103
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||| ||||   |||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  18242207 ttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 18242108  T
Q  659 gattt 663  Q
    |||||    
T  18242107 gattt 18242103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 30388416 - 30388311
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctt 655  Q
    |||||||||| ||||||  |||||||||||||  ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  30388416 ggtttaattgtactttttccccctatcttttgctaattgtgcgattttgcacccccttttttt--ttgagcgattttgcaccccatctttttaccccctt 30388319  T
Q  656 tctgattt 663  Q
    ||||||||    
T  30388318 tctgattt 30388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 659
Target Start/End: Original strand, 21031982 - 21032081
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| |||||| ||||||  ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  21031982 ttaattgcacttttc-cccctaacttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 21032080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 18241857 - 18241944
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||||     |||||||||||||||| |||||||    
T  18241857 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 18241944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 22755140 - 22755038
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||  |||  |||||||||| |||||||||||||| |||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  22755140 ttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctatagtttt-cccctttctg 22755042  T
Q  660 attt 663  Q
    ||||    
T  22755041 attt 22755038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 663
Target Start/End: Complemental strand, 29074412 - 29074320
Alignment:
Q  571 tttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| ||| |||||||||||||| | ||| ||  ||||| |||||||||||||    
T  29074412 tttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattt 29074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 663
Target Start/End: Complemental strand, 29079176 - 29079084
Alignment:
Q  571 tttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| ||| |||||||||||||| | ||| ||  ||||| |||||||||||||    
T  29079176 tttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattt 29079084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 663
Target Start/End: Complemental strand, 29106985 - 29106893
Alignment:
Q  571 tttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| ||| |||||||||||||| | ||| ||  ||||| |||||||||||||    
T  29106985 tttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattt 29106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 10039679 - 10039764
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||  | |||||||||| |||||||||||||    
T  10039679 ttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc-tctttttttatgagcgattttacaccccatctttt 10039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 11656833 - 11656746
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| | |||||||||||  ||||||||||||||||||||| | ||| |    ||||||||||||||||||||||||    
T  11656833 ttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctctttatttttgagcgattttgcaccccatctttt 11656746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 22684408 - 22684306
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||| |||||||| |||||||||||||||| |||||||| | ||||||||| ||| ||  |||| ||||||||||    
T  22684408 ttaattgcacttttc-cccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttcccctttctg 22684310  T
Q  660 attt 663  Q
    ||||    
T  22684309 attt 22684306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 22754660 - 22754762
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||| |||||||| |||||||||||||||| |||||||| | ||||||||| ||| ||  |||| ||||||||||    
T  22754660 ttaattgcacttttc-cccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttcccctttctg 22754758  T
Q  660 attt 663  Q
    ||||    
T  22754759 attt 22754762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 560 - 618
Target Start/End: Original strand, 3403720 - 3403778
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttt 618  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  3403720 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttt 3403778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 557 - 619
Target Start/End: Complemental strand, 31598781 - 31598720
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||    
T  31598781 ggtttaattgcacttttc-cccctatcttttgttaattgtgcgattttgcatcccatcttttt 31598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 21032331 - 21032243
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc-ccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| || ||   |||||    ||||||||||||||||||||||||    
T  21032331 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcgcctcctcttttttctttgagcgattttgcaccccatctttt 21032243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 2354412 - 2354514
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| |||||||  ||| |||||||| |||||||||| |||||  ||| |||||||||||||| | ||| ||  |||||||||||||||    
T  2354412 ttaattgcatttttc-cccctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttccccctttctg 2354510  T
Q  660 attt 663  Q
    ||||    
T  2354511 attt 2354514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 564 - 663
Target Start/End: Complemental strand, 13177102 - 13177004
Alignment:
Q  564 ttgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||||||| |||||||  | ||||||||||| |||||| |||| |||| |||||||||||||||||||| ||  ||  || ||||||||||||||||    
T  13177102 ttgcacttttc-cccctatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgccccttatagttgtccccctttctgattt 13177004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 558 - 657
Target Start/End: Original strand, 21032101 - 21032203
Alignment:
Q  558 gtttaattgcacttttcacccctatctt-ttgtcaattgtgcgattttgcaccccatat--ttttaaacgagcgattttgcaccccatctttttccccct 654  Q
    ||||| ||||||||||  |||||||||| |||||||||||||||||||||||||| | |  ||||    |||||||||| ||||||||||||| ||||||    
T  21032101 gtttagttgcacttttgccccctatcttcttgtcaattgtgcgattttgcaccccctcttcttttttttgagcgatttttcaccccatcttttaccccct 21032200  T
Q  655 ttc 657  Q
    |||    
T  21032201 ttc 21032203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 652
Target Start/End: Complemental strand, 2354861 - 2354769
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccc 652  Q
    ||||||||| ||||| |  ||||  |||||||||||||||||||||||||||||  ||| |||||||| ||||||| ||| ||  ||||||||    
T  2354861 ttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctatagttttcccc 2354769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 607
Target Start/End: Original strand, 12714431 - 12714481
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgca 607  Q
    |||| ||||||||||||  |||||||||||||| |||||||||||||||||    
T  12714431 ggttgaattgcacttttgccccctatcttttgttaattgtgcgattttgca 12714481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 611
Target Start/End: Original strand, 3825530 - 3825580
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||| ||||||| |||||  |||||||||||||||||||||    
T  3825530 ttaattgcacttttc-cccctatattttgctaattgtgcgattttgcacccc 3825580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 611
Target Start/End: Original strand, 23250595 - 23250645
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||  |||||||||||||||||||||| ||| |||||||||    
T  23250595 ttaattgcacttttt-cccctatcttttgtcaattgtgagatcttgcacccc 23250645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 585 - 663
Target Start/End: Original strand, 13176647 - 13176725
Alignment:
Q  585 tttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||| ||||||| |||||||| | |||||  ||||||| |||||||||||| ||| ||  ||||||| |||||||||||    
T  13176647 tttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctatagttttcccactttctgattt 13176725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 585 - 663
Target Start/End: Original strand, 32733585 - 32733663
Alignment:
Q  585 tttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||| ||||| | |||||||||| |||||| |||||||||||| |||||||  || ||  |||| ||||||||||||||    
T  32733585 tttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctatagtttttcccctttctgattt 32733663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 2762517 - 2762590
Alignment:
Q  591 aattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttctgattt 663  Q
    ||||||||||||||||||||| | |||||    ||| ||||||||||| ||||||||| |||||||| ||||||    
T  2762517 aattgtgcgattttgcaccccctctttttttttgagtgattttgcacctcatctttttgccccctttttgattt 2762590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 662
Target Start/End: Complemental strand, 23250877 - 23250840
Alignment:
Q  625 agcgattttgcaccccatctttttccccctttctgatt 662  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  23250877 agcgattttgtaccccatcttttgccccctttctgatt 23250840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 2e-60; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 693
Target Start/End: Original strand, 7591203 - 7591337
Alignment:
Q  559 tttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttct 658  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7591203 tttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttct 7591302  T
Q  659 gatttggaggcccccatgtgttttagtgatgatgt 693  Q
    |||||||||||||||||||||||||| ||||||||    
T  7591303 gatttggaggcccccatgtgttttagcgatgatgt 7591337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 2639533 - 2639399
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2639533 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 2639434  T
Q  660 atttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    |||||||||| ||||||||||||||| ||||||||    
T  2639433 atttggaggccccccatgtgttttagcgatgatgt 2639399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 26842289 - 26842155
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26842289 ttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 26842190  T
Q  660 atttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    |||||||||| ||||||||||||||||||||||||    
T  26842189 atttggaggccccccatgtgttttagtgatgatgt 26842155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 26841590 - 26841724
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26841590 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 26841689  T
Q  660 atttggagg-cccccatgtgttttagtgatgatgt 693  Q
    ||||||||| ||||||||  |||||||||||||||    
T  26841690 atttggaggccccccatgaattttagtgatgatgt 26841724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 2638823 - 2638958
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2638823 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 2638922  T
Q  660 atttggagg--cccccatgtgttttagtgatgatgt 693  Q
    |||||||||  |||||| || |||||||||||||||    
T  2638923 atttggaggcccccccacgtattttagtgatgatgt 2638958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 560 - 673
Target Start/End: Original strand, 18296079 - 18296192
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  18296079 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccttttctg 18296178  T
Q  660 atttggaggccccc 673  Q
    ||||||||||||||    
T  18296179 atttggaggccccc 18296192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 7591901 - 7591767
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  7591901 ttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatttttttccccctttctg 7591802  T
Q  660 atttggaggccccc-atgtgttttagtgatgatgt 693  Q
    |||||||||||||| | || |||||||||||||||    
T  7591801 atttggaggccccctacgtattttagtgatgatgt 7591767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 8851148 - 8851254
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  8851148 ggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 8851247  T
Q  657 ctgattt 663  Q
    |||||||    
T  8851248 ctgattt 8851254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 7664251 - 7664354
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  7664251 ttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttctg 7664350  T
Q  660 attt 663  Q
    ||||    
T  7664351 attt 7664354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 7664724 - 7664621
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  ||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  7664724 ttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 7664625  T
Q  660 attt 663  Q
    ||||    
T  7664624 attt 7664621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 26692874 - 26692768
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| || ||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  26692874 ggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 26692775  T
Q  657 ctgattt 663  Q
    |||||||    
T  26692774 ctgattt 26692768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 30190926 - 30191030
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  30190926 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 30191025  T
Q  659 gattt 663  Q
    |||||    
T  30191026 gattt 30191030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 8851633 - 8851531
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  8851633 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt-cccctttctg 8851535  T
Q  660 attt 663  Q
    ||||    
T  8851534 attt 8851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 26692396 - 26692502
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||  || ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||| |||||||    
T  26692396 ggtttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttccccttt 26692495  T
Q  657 ctgattt 663  Q
    |||||||    
T  26692496 ctgattt 26692502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 626 - 693
Target Start/End: Complemental strand, 18296707 - 18296639
Alignment:
Q  626 gcgattttgcaccccatctttttccccctttctgatttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18296707 gcgattttgcaccccatctttttccccctttctgatttggaggccccccatgtgttttagtgatgatgt 18296639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 40469783 - 40469676
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctt 655  Q
    |||||||||||||||||  |||||||||||||  ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||||||    
T  40469783 ggtttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 40469684  T
Q  656 tctgattt 663  Q
    ||||||||    
T  40469683 tctgattt 40469676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 560 - 657
Target Start/End: Original strand, 24832334 - 24832432
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttc 657  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||||| |||||    ||||||||||||||||||||||||| |||||||||    
T  24832334 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctttc 24832432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 20347515 - 20347411
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||| |||||||||||||||||||||  |||||||||    
T  20347515 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagggattttgcaccccatctttttgtcccctttct 20347416  T
Q  659 gattt 663  Q
    |||||    
T  20347415 gattt 20347411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 590 - 693
Target Start/End: Complemental strand, 38490862 - 38490758
Alignment:
Q  590 caattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggcccc-catgtgttttagtgat 688  Q
    |||||||||||||||||| | |||  ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||   ||||||||||    
T  38490862 caattgtgcgattttgcatctcatggttttaaacgagcgattttgcaccccatctttttccccctttatgatttcaaggcccctcataacttttagtgat 38490763  T
Q  689 gatgt 693  Q
    |||||    
T  38490762 gatgt 38490758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 16911319 - 16911217
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| | |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||| ||  |||||||||||||||    
T  16911319 ttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctg 16911221  T
Q  660 attt 663  Q
    ||||    
T  16911220 attt 16911217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 32673196 - 32673090
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt-tccccctt 655  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||    ||||||||||||||||||||||||  ||| |||    
T  32673196 ggtttaattgcacttttt-cccctatcttttgccaattgtgcgattttgcaccccctatttttttttgagcgattttgcaccccatcttttcgccctctt 32673098  T
Q  656 tctgattt 663  Q
    ||||||||    
T  32673097 tctgattt 32673090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 635
Target Start/End: Original strand, 37720207 - 37720282
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  37720207 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 37720282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 41790963 - 41790860
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||||  ||| |||||||||||||||| ||| ||  ||||||| |||||||    
T  41790963 ttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctctttctg 41790864  T
Q  660 attt 663  Q
    ||||    
T  41790863 attt 41790860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 41790491 - 41790596
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  |||||| |||||    
T  41790491 ggtttaattgcatttttc-cccctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctccttt 41790589  T
Q  657 ctgattt 663  Q
    |||||||    
T  41790590 ctgattt 41790596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 664
Target Start/End: Original strand, 5378664 - 5378768
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||||||||| || ||| ||||| |||||||||| ||| || |||| ||| |||||||    
T  5378664 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctctttctg 5378763  T
Q  660 atttg 664  Q
    |||||    
T  5378764 atttg 5378768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 664
Target Start/End: Complemental strand, 5380010 - 5379906
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||  |||||||||||||||||||||| || ||| ||||| |||||||||| ||| || |||| |||||||||||    
T  5380010 ttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccccctttctg 5379911  T
Q  660 atttg 664  Q
    |||||    
T  5379910 atttg 5379906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 6171507 - 6171404
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||| | |||||    |||| |||||||||||||||||||| ||||||||||    
T  6171507 ttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc-tctttttttttgagcaattttgcaccccatctttttgccccctttct 6171409  T
Q  659 gattt 663  Q
    |||||    
T  6171408 gattt 6171404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 564 - 676
Target Start/End: Original strand, 6324924 - 6325036
Alignment:
Q  564 ttgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||||||| |||||||  |||| |||||||||||||||||| |||||| |||||||||||||||||||  ||| ||  ||||||| |||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattt 6325023  T
Q  664 ggaggcccccatg 676  Q
       ||||||||||    
T  6325024 tatggcccccatg 6325036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 16910830 - 16910933
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| | |  |||| ||||||||||||||||||||||||| |||||||||||||||||||| | | ||  |||||| ||||||||    
T  16910830 ttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttcctcctttctg 16910929  T
Q  660 attt 663  Q
    ||||    
T  16910930 attt 16910933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 17850981 - 17851083
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||| ||   ||||||||||| ||    
T  17850981 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttgccccctatagatttccccctttatg 17851079  T
Q  660 attt 663  Q
    ||||    
T  17851080 attt 17851083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 18296744 - 18296685
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  18296744 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 18296685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 635
Target Start/End: Complemental strand, 18750176 - 18750102
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    |||||||||||| || |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18750176 ttaattgcacttctc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 18750102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 19141901 - 19141797
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||| |  ||||||  |||| |||||||||||||||||| |||||| ||| |||||||||||||||| ||| ||  ||||||||||||    
T  19141901 ggtttaattgcactttcc--ccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttcccccttt 19141804  T
Q  657 ctgattt 663  Q
    |||||||    
T  19141803 ctgattt 19141797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 5793447 - 5793553
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| ||| | |  |||| |||||||||||||||||| || ||| |||||||||||||||||||| ||| ||  ||||||| ||||    
T  5793447 ggtttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctcttt 5793546  T
Q  657 ctgattt 663  Q
    |||||||    
T  5793547 ctgattt 5793553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 585 - 663
Target Start/End: Original strand, 7979593 - 7979671
Alignment:
Q  585 tttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||| |||||||||||    
T  7979593 tttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttctgattt 7979671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 585 - 663
Target Start/End: Complemental strand, 17851428 - 17851350
Alignment:
Q  585 tttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  17851428 tttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 17851350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 660
Target Start/End: Complemental strand, 6325398 - 6325298
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||| |||||||||||||||||||| |||| | |||||||||||||||||| ||| ||  |||||||| ||||||    
T  6325398 ttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttctg 6325299  T
Q  660 a 660  Q
    |    
T  6325298 a 6325298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 11883626 - 11883730
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||    |||| |||||||||| ||||||||| |||||||| |    
T  11883626 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcaattttgcacctcatctttttgccccctttat 11883725  T
Q  659 gattt 663  Q
    |||||    
T  11883726 gattt 11883730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 11883977 - 11883890
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||    |||||||||||||| |||||||||    
T  11883977 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcactccatctttt 11883890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 30191276 - 30191189
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  30191276 ttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 30191189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 26737832 - 26737728
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccat-ctttttccccctttct 658  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||   |||||    ||| |||||| |||||||| ||||| ||||||||||    
T  26737832 ttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccctcttttttttttgagagattttacaccccatccttttgccccctttct 26737733  T
Q  659 gattt 663  Q
    |||||    
T  26737732 gattt 26737728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 560 - 653
Target Start/End: Original strand, 15321395 - 15321486
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccc 653  Q
    |||||||||||||||  ||||||||||||| |||||||| |||||||| ||| ||||||     ||||||||||||||||||||||||| ||||    
T  15321395 ttaattgcacttttc--ccctatcttttgttaattgtgcaattttgcatcccctattttattttgagcgattttgcaccccatctttttgcccc 15321486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 558 - 647
Target Start/End: Original strand, 15920779 - 15920867
Alignment:
Q  558 gtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    |||||||| |||||||| | |||||||||||| ||||||||||||||||||||| | |||||    |||| |||||||||||||||||||    
T  15920779 gtttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcaattttgcaccccatctttt 15920867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 618
Target Start/End: Complemental strand, 18055370 - 18055309
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttt 618  Q
    |||||||||||||||||  || ||| ||||||||||||||||||||||||||||||| ||||    
T  18055370 ggtttaattgcactttttccctctaccttttgtcaattgtgcgattttgcaccccatctttt 18055309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 661
Target Start/End: Original strand, 19141447 - 19141547
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  |||| ||||||||| ||||||||||||||| |||||||||||||| ||| | ||| ||  |||||||||||| ||    
T  19141447 ttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctatagttttccccctttatg 19141545  T
Q  660 at 661  Q
    ||    
T  19141546 at 19141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 591 - 663
Target Start/End: Complemental strand, 7980023 - 7979951
Alignment:
Q  591 aattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||  || ||  |||| ||||||||||||||    
T  7980023 aattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctatagtttttcccctttctgattt 7979951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 20347166 - 20347252
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    |||||| |||||||| || ||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  20347166 ttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc-tctttttttttgagcgattttgcaccctatctttt 20347252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 558 - 611
Target Start/End: Complemental strand, 43495537 - 43495484
Alignment:
Q  558 gtttaattgcacttttcacccctatctttt-gtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  43495537 gtttaattgcacttttc-cccctatctttttgtcaattgtgcgattttgcacccc 43495484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 6171159 - 6171207
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  6171159 ttaattgcacttttc-cccctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 6495772 - 6495723
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  6495772 ttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 32672845 - 32672932
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||   || |||||||||| ||||||||||||||||||||  | |||||    |||||||||||||||| |||||||    
T  32672845 ttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccctctctttttttttgagcgattttgcaccctatctttt 32672932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 40469430 - 40469517
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||| | ||||| | |||||||||||  ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  40469430 ttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 40469517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 635
Target Start/End: Original strand, 18749726 - 18749803
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||||||| || ||| |  |||||||||| || |||||||||||||||| ||||||||||  ||||||||    
T  18749726 ggtttaattgcactttt-actcctctagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgc 18749803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 29343583 - 29343633
Alignment:
Q  559 tttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    ||||||||||||||||  | ||||||||||||||||||| |||||||||||    
T  29343583 tttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 29230285 - 29230334
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    |||||||||||||||  | ||||||||||||||||||| |||||||||||    
T  29230285 ttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 15321513 - 15321565
Alignment:
Q  558 gtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    ||||||||||||||||  ||||||||||||  ||| |||||||||||||||||    
T  15321513 gtttaattgcacttttgtcccctatctttttccaactgtgcgattttgcaccc 15321565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 610
Target Start/End: Original strand, 6495470 - 6495519
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    |||||||||||||||  |||||||||| || ||||||||||||||||||||    
T  6495470 ttaattgcacttttcctccctatcttt-gttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 675
Target Start/End: Original strand, 31641551 - 31641600
Alignment:
Q  626 gcgattttgcaccccatctttttccccctttctgatttggaggcccccat 675  Q
    |||||||||||| ||||| ||| ||||||||||| |||| ||||||||||    
T  31641551 gcgattttgcactccatcctttcccccctttctggtttgaaggcccccat 31641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 8e-60; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 557 - 693
Target Start/End: Complemental strand, 36096529 - 36096392
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  36096529 ggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttccccttt 36096430  T
Q  657 ctgatttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36096429 ctgatttggaggccccccatgtgttttagtgatgatgt 36096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 50679475 - 50679341
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50679475 ttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 50679376  T
Q  660 atttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    |||||||||| ||||||||||||||||||||||||    
T  50679375 atttggaggccccccatgtgttttagtgatgatgt 50679341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 557 - 693
Target Start/End: Original strand, 43050607 - 43050744
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  43050607 ggtttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgcaccccatctttttcccccttt 43050706  T
Q  657 ctgatttggaggccc-ccatgtgttttagtgatgatgt 693  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  43050707 ctgatttggaggccctccatgtgttttagtgatgatgt 43050744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 43051303 - 43051169
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  43051303 ttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctctttctg 43051204  T
Q  660 atttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    |||||||||| ||||||||||||||||||||||||    
T  43051203 atttggaggccccccatgtgttttagtgatgatgt 43051169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 560 - 673
Target Start/End: Original strand, 50678782 - 50678895
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50678782 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 50678881  T
Q  660 atttggaggccccc 673  Q
    ||||||||||||||    
T  50678882 atttggaggccccc 50678895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 45830247 - 45830115
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  45830247 ttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgcaccccatcttttt-cccctttctg 45830149  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
    |||||||| ||||||| |||||||||||||||||    
T  45830148 atttggagccccccatatgttttagtgatgatgt 45830115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 36095820 - 36095953
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  36095820 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctatcttttt-cccctttctg 36095918  T
Q  660 atttggagg-cccccatgtgttttagtgatgatgt 693  Q
    ||||||||| ||||||||| |||||||||||||||    
T  36095919 atttggaggccccccatgtattttagtgatgatgt 36095953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 56505696 - 56505830
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  56505696 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttccccctttctg 56505795  T
Q  660 atttggagg-cccccatgtgttttagtgatgatgt 693  Q
     |||| ||| |||||||||||||||||||||||||    
T  56505796 gtttgaaggccccccatgtgttttagtgatgatgt 56505830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 56506625 - 56506491
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||| || |||| |||||||  |||||||||||||||||||| |||||||||||||||    
T  56506625 ttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttgcaccccatcattttccccctttctg 56506526  T
Q  660 atttggaggcccc-catgtgttttagtgatgatgt 693  Q
    ||||| ||||||| | |||||||||||||||||||    
T  56506525 atttgaaggcccctcgtgtgttttagtgatgatgt 56506491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 557 - 693
Target Start/End: Complemental strand, 47219255 - 47219122
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||||||||||  || ||||||||| ||||||||| |||||||||||||||||    |    
T  47219255 ggtttaattgcatttttcacctctatcttttgctaattgtgcgattttgcaccttatgtttttaaaccagcgattttacaccccatctttttccc----t 47219160  T
Q  657 ctgatttggaggccc-ccatgtgttttagtgatgatgt 693  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  47219159 ctgatttggaggccctccatgtgttttagtgatgatgt 47219122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 560 - 676
Target Start/End: Complemental strand, 39744516 - 39744400
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  39744516 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 39744417  T
Q  660 atttggaggcccccatg 676  Q
    |||| | || |||||||    
T  39744416 attttgtggtccccatg 39744400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 28196824 - 28196691
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  28196824 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 28196725  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
    ||||   || |||||||   ||||||||||||||    
T  28196724 attttatggtccccatgacatttagtgatgatgt 28196691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 4239417 - 4239314
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||    
T  4239417 ttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttccccctttctg 4239318  T
Q  660 attt 663  Q
    ||||    
T  4239317 attt 4239314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 9023731 - 9023628
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||  |||||||||||||||    
T  9023731 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctg 9023632  T
Q  660 attt 663  Q
    ||||    
T  9023631 attt 9023628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 23540303 - 23540200
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||| | ||| ||  |||||||||||||||    
T  23540303 ttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttccccctttctg 23540204  T
Q  660 attt 663  Q
    ||||    
T  23540203 attt 23540200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 28196349 - 28196452
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  28196349 ttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 28196448  T
Q  660 attt 663  Q
    ||||    
T  28196449 attt 28196452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 560 - 662
Target Start/End: Original strand, 25161881 - 25161983
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  25161881 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 25161980  T
Q  660 att 662  Q
    |||    
T  25161981 att 25161983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 32703701 - 32703568
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  32703701 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccttttctg 32703602  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
    ||||   || |||||||   ||||||||||||||    
T  32703601 attttatggtccccatgacatttagtgatgatgt 32703568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 45828997 - 45829130
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||| ||||||||| ||||||||||  |||||||||||||||| |||| || || |||||| |||||||||||| |||||||||||||| | |||||    
T  45828997 ttaattgtacttttcactcctatcttttaccaattgtgcgattttgtacccaatgttattaaacaagcgattttgcatcccatctttttccctcgttctg 45829096  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
    ||||| | ||| | || |||||||||||||||||    
T  45829097 atttgaatgcctctatatgttttagtgatgatgt 45829130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 560 - 676
Target Start/End: Complemental strand, 293268 - 293152
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||  ||  |||||||||||||||    
T  293268 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttccccctttctg 293169  T
Q  660 atttggaggcccccatg 676  Q
    ||||   ||||||||||    
T  293168 attttatggcccccatg 293152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 169490 - 169387
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||| ||    
T  169490 ttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttttg 169391  T
Q  660 attt 663  Q
    ||||    
T  169390 attt 169387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 9380310 - 9380413
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  9380310 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 9380409  T
Q  660 attt 663  Q
    ||||    
T  9380410 attt 9380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 9380792 - 9380689
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  9380792 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 9380693  T
Q  660 attt 663  Q
    ||||    
T  9380692 attt 9380689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 43292040 - 43292143
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  43292040 ttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctg 43292139  T
Q  660 attt 663  Q
    ||||    
T  43292140 attt 43292143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 16555868 - 16555764
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||| |||||||||  ||||||||||||||||||||||| |||||    ||||||||||||||||||||||||| ||||||||||    
T  16555868 ttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctttct 16555769  T
Q  659 gattt 663  Q
    |||||    
T  16555768 gattt 16555764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 9023247 - 9023350
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||  |||||||||||| ||    
T  9023247 ttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttccccctttatg 9023346  T
Q  660 attt 663  Q
    ||||    
T  9023347 attt 9023350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 32703228 - 32703331
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||| |||||||| || |||||||||||||||||||| ||| ||  |||||||||||||||    
T  32703228 ttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttctg 32703327  T
Q  660 attt 663  Q
    ||||    
T  32703328 attt 32703331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 11529171 - 11529305
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  ||||| |||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||| |||| ||||||| |||| |     
T  11529171 ttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttgcaccacatcattttccctcttttta 11529270  T
Q  660 atttggaggcccc-catgtgttttagtgatgatgt 693  Q
     |||| || |||| ||| |||||||||||||||||    
T  11529271 gtttgaagtcccctcatatgttttagtgatgatgt 11529305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 169016 - 169120
Alignment:
Q  560 ttaattgcacttttcacccc-tatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttct 658  Q
    ||||||||||||||| |||| |||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||| |||||||||    
T  169016 ttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttcccctttct 169115  T
Q  659 gattt 663  Q
    |||||    
T  169116 gattt 169120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 25162348 - 25162261
Alignment:
Q  576 cccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  25162348 cccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattt 25162261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 39086674 - 39086571
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||| ||||||||||||||||||||  ||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  39086674 ttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttccccctttctg 39086575  T
Q  660 attt 663  Q
    ||||    
T  39086574 attt 39086571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 39744033 - 39744136
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  |||  ||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  39744033 ttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctatagttttccccctttctg 39744132  T
Q  660 attt 663  Q
    ||||    
T  39744133 attt 39744136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 48405965 - 48406097
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||| ||| ||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  48405965 ttaattgcacttttc-cccctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttctg 48406063  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
    | ||   || |||||||   ||||||||||||||    
T  48406064 actttatggtccccatgacatttagtgatgatgt 48406097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 3930530 - 3930427
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||     |||||||||||||||||||||||| ||||||||||    
T  3930530 ttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccctttct 3930432  T
Q  659 gattt 663  Q
    |||||    
T  3930431 gattt 3930427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 292785 - 292888
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||| |||||||| | |||| |||||||||||||||||||| ||| |   |||||||||||||||    
T  292785 ttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccctacagttttccccctttctg 292884  T
Q  660 attt 663  Q
    ||||    
T  292885 attt 292888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 13198604 - 13198711
Alignment:
Q  558 gtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat-atttttaaacgagcgattttgcaccccatcttttt-ccccctt 655  Q
    ||||||||||||||||| ||  ||||||||| |||||||||||||||||||||| |  |||||    ||||||||||||||||||||||||| |||||||    
T  13198604 gtttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccccatctttttgccccctt 13198703  T
Q  656 tctgattt 663  Q
    ||||||||    
T  13198704 tctgattt 13198711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 26207797 - 26207694
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| |||||||  |||| ||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  |||||| ||||||||    
T  26207797 ttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 26207698  T
Q  660 attt 663  Q
    ||||    
T  26207697 attt 26207694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 48406438 - 48406333
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||| ||||| | |||||||  |||| ||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||  |||| |||||||    
T  48406438 ggtttaattgtactttcc-cccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttccccttt 48406340  T
Q  657 ctgattt 663  Q
    |||||||    
T  48406339 ctgattt 48406333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 23539844 - 23539945
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| |  ||||||  |||| ||||||||||||||||||||||||| ||| |||||| ||||||||| ||| || ||||||| ||||||||    
T  23539844 ttaattgcactttcc--ccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctcctttctg 23539941  T
Q  660 attt 663  Q
    ||||    
T  23539942 attt 23539945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 13198957 - 13198870
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||||     |||||||||||||||| |||||||    
T  13198957 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 13198870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 26207364 - 26207466
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| | |||||||  |||| ||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  |||||| ||||||||    
T  26207364 ttaattgcactttcc-cccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 26207462  T
Q  660 attt 663  Q
    ||||    
T  26207463 attt 26207466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 43292408 - 43292306
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||| ||||| |  |||| |||||||||||||||||| |||||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  43292408 ttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt-cccctttctg 43292310  T
Q  660 attt 663  Q
    ||||    
T  43292309 attt 43292306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 44468958 - 44468871
Alignment:
Q  576 cccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||||||  |||| |||||||||||||||||||| |||| |||||||||||||||||||| ||| ||  |||||| ||||||||||||    
T  44468958 cccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctgattt 44468871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 49178866 - 49178779
Alignment:
Q  561 taattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat-atttttaaacgagcgattttgcaccccatctttt 647  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||| |  |||||    ||||||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctctttttttttggagcgattttgcaccccatctttt 49178779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 646
Target Start/End: Complemental strand, 18077253 - 18077167
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttt 646  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||||||| | |||||    ||||||||||||| |||||||||    
T  18077253 ttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctcttttttgttgagcgattttgcatcccatcttt 18077167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 618
Target Start/End: Complemental strand, 24775834 - 24775776
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttt 618  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||    
T  24775834 ttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccatctttt 24775776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 35393826 - 35393741
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||||||| |||||||||  |||||||||| |||||||||| | ||||| |  ||||||||||||||||||||||||    
T  35393826 ttaattgcacttttcaccc-tatcttttgctaattgtgcgaatttgcaccccctcttttttat-gagcgattttgcaccccatctttt 35393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 560 - 657
Target Start/End: Original strand, 23432479 - 23432577
Alignment:
Q  560 ttaattgcacttttcacccctatctttt-gtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttc 657  Q
    ||||||||||||||  ||||||| |||| ||||||||||| ||| |||||||||| |||||||| || | |||||||||||  |||||| |||||||||    
T  23432479 ttaattgcacttttgccccctatttttttgtcaattgtgcaattctgcaccccatctttttaaatgaacaattttgcaccctctcttttgccccctttc 23432577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 611
Target Start/End: Original strand, 16555518 - 16555569
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  16555518 ttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacccc 16555569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 611
Target Start/End: Original strand, 22681578 - 22681628
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  22681578 ttaattgcactttcc-cccctatcttttgtcaattgtgcgattttgcacccc 22681628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 590 - 656
Target Start/End: Complemental strand, 11530219 - 11530154
Alignment:
Q  590 caattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||| |||| |||||||||| || |||||||||||||| ||| ||||||||||||    
T  11530219 caattgtgcgattttgaaccc-atatttttaatcgtgcgattttgcacccaatccttttcccccttt 11530154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 585 - 663
Target Start/End: Original strand, 12757794 - 12757872
Alignment:
Q  585 tttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||||  ||| ||  |||| || |||||||||||    
T  12757794 tttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctatagtttttcctctttctgattt 12757872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 647
Target Start/End: Original strand, 39415244 - 39415314
Alignment:
Q  577 ccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||  ||||||||||||||||||||  | ||||||   ||||||||||||||||||||||||    
T  39415244 ccctatcttttgctaattgtgcgattttgcaccctctctttttatttgagcgattttgcaccccatctttt 39415314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 664
Target Start/End: Complemental strand, 23433516 - 23433433
Alignment:
Q  580 tatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgatttg 664  Q
    ||||||||||||||||||||||| |||| ||  | |||||||  ||||||||||||||||  | ||||| |||||||||||||||    
T  23433516 tatcttttgtcaattgtgcgattgtgcatcctttctttttaagtgagcgattttgcaccctct-tttttgcccctttctgatttg 23433433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 3930182 - 3930268
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||  |||||||||||| | |||| |||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  3930182 ttaattgcacttttt-cccctatcttttattaattatgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 3930268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 11241392 - 11241478
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    |||||||||||||||  || |||||||||| ||||||||||||||||| ||| | |||||    |||||||||||||||| |||||||    
T  11241392 ttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctcttttt-tttgagcgattttgcaccctatctttt 11241478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 11241711 - 11241653
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    ||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||| |||||    
T  11241711 ttaattgtacttttc-cccctatcttttgccaattgtgggattttgcaccccatcttttt 11241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 39912057 - 39912158
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  ||||||  ||| | |||||||||||||| ||  ||||| |||||||||| ||||||||| ||| ||  |||||||||||||||    
T  39912057 ttaattgcacttttcctccctatagtttattaattgtgcgattttaca-tccatagttttaaacgaacgattttgc-ccctatagttttccccctttctg 39912154  T
Q  660 attt 663  Q
    ||||    
T  39912155 attt 39912158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 618
Target Start/End: Original strand, 5205991 - 5206049
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttt 618  Q
    |||||||||||||||  ||||||||||||| ||||  ||||||||||||||||| ||||    
T  5205991 ttaattgcacttttcctccctatcttttgttaatttggcgattttgcaccccatctttt 5206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 663
Target Start/End: Complemental strand, 12758214 - 12758152
Alignment:
Q  601 ttttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||||||| ||||| |||||||||||| ||||||| ||| ||  |||||||||||||||||||    
T  12758214 ttttgcacgccatagttttaaacgagcaattttgccccctatagttttccccctttctgattt 12758152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 589 - 635
Target Start/End: Complemental strand, 39912509 - 39912463
Alignment:
Q  589 tcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  39912509 tcaattgtgcgattttgcatcccatagttttaaacgagtgattttgc 39912463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 22681930 - 22681881
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    ||||||||||||||| | |||||||||||| |||||||| ||||||||||    
T  22681930 ttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 611
Target Start/End: Original strand, 8181994 - 8182046
Alignment:
Q  560 ttaattgcacttttcacccctatc-ttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  8181994 ttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 611
Target Start/End: Complemental strand, 8182224 - 8182172
Alignment:
Q  560 ttaattgcacttttcaccccta-tcttttgtcaattgtgcgattttgcacccc 611  Q
    |||||||||||||||||||||| | |||||  |||||||||||||||||||||    
T  8182224 ttaattgcacttttcacccctatttttttgctaattgtgcgattttgcacccc 8182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 5206280 - 5206222
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    ||||||||||||||| ||| |||||||| | |||||||||||||||||||| || |||||    
T  5206280 ttaattgcacttttcccccttatctttttt-aattgtgcgattttgcaccctatcttttt 5206222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 610
Target Start/End: Complemental strand, 25225449 - 25225399
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    |||||||||||| |  | ||||||||||| |||||||||||||||||||||    
T  25225449 ttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 562 - 611
Target Start/End: Original strand, 49178644 - 49178694
Alignment:
Q  562 aattgcacttttcacccctatctttt-gtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||  |||||||||||| | ||||||||||||||||||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccc 49178694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 24775642 - 24775695
Alignment:
Q  558 gtttaattgcacttttcacccctatctttt-gtcaattgtgcgattttgcaccc 610  Q
    ||||||||||||||||  ||||||| |||| |||||||||||||||||| ||||    
T  24775642 gtttaattgcacttttgccccctatatttttgtcaattgtgcgattttgtaccc 24775695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 115; Significance: 5e-58; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 6846 - 6712
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6846 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 6747  T
Q  660 atttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    |||||||||| ||||||||||||||||||||||||    
T  6746 atttggaggccccccatgtgttttagtgatgatgt 6712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 6155 - 6288
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6155 ttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttgcaccccatctttttccccctttctg 6254  T
Q  660 atttggaggcccccatgtgttttagtgatgatgt 693  Q
    ||||||||||||||||||||||||||||||||||    
T  6255 atttggaggcccccatgtgttttagtgatgatgt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 1e-55; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 18817662 - 18817528
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18817662 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 18817563  T
Q  660 atttggag-gcccccatgtgttttagtgatgatgt 693  Q
    ||||||||  |||||||||||||||| ||||||||    
T  18817562 atttggagaccccccatgtgttttagcgatgatgt 18817528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 557 - 693
Target Start/End: Complemental strand, 11351481 - 11351346
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  11351481 ggtttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttacaccccatc-ttttcccccttt 11351383  T
Q  657 ctgatttggaggcccccatgtgttttagtgatgatgt 693  Q
     |||||||||||||||||||||||||||| |||||||    
T  11351382 atgatttggaggcccccatgtgttttagtaatgatgt 11351346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 11350811 - 11350944
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11350811 ttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttttg 11350909  T
Q  660 atttggagg-cccccatgtgttttagtgatgatgt 693  Q
    ||||||||| |||||||||||||||||||||||||    
T  11350910 atttggaggccccccatgtgttttagtgatgatgt 11350944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 18816955 - 18817089
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  18816955 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcatcccatctttttccccctttctg 18817054  T
Q  660 atttggagg-cccccatgtgttttagtgatgatgt 693  Q
    ||||||||| |||||| || |||||||||||||||    
T  18817055 atttggaggccccccacgtattttagtgatgatgt 18817089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 12498570 - 12498673
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  12498570 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 12498669  T
Q  660 attt 663  Q
    ||||    
T  12498670 attt 12498673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 21207226 - 21207332
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||| ||||||    
T  21207226 ggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcacccttt 21207325  T
Q  657 ctgattt 663  Q
    |||||||    
T  21207326 ctgattt 21207332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 18433018 - 18433122
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||||| |||||    ||||||||||||||||||||||||| ||||||||||    
T  18433018 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctttct 18433117  T
Q  659 gattt 663  Q
    |||||    
T  18433118 gattt 18433122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 12498979 - 12498876
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||  |||||||||||||||    
T  12498979 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttccccctttctg 12498880  T
Q  660 attt 663  Q
    ||||    
T  12498879 attt 12498876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 19515014 - 19514911
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||  ||||||| ||| ||  |||||||||||||||    
T  19515014 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttccccctttctg 19514915  T
Q  660 attt 663  Q
    ||||    
T  19514914 attt 19514911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 22729490 - 22729388
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  22729490 ttaattgcacttttc-cccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 22729392  T
Q  660 attt 663  Q
    ||||    
T  22729391 attt 22729388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 26570732 - 26570835
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||| |||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||  |||||||||||||||    
T  26570732 ttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctg 26570831  T
Q  660 attt 663  Q
    ||||    
T  26570832 attt 26570835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 26571215 - 26571112
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||| ||||||||    
T  26571215 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcctttctg 26571116  T
Q  660 attt 663  Q
    ||||    
T  26571115 attt 26571112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 43464242 - 43464140
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  43464242 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccctttctg 43464144  T
Q  660 attt 663  Q
    ||||    
T  43464143 attt 43464140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 25115760 - 25115864
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  25115760 ttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccctttct 25115859  T
Q  659 gattt 663  Q
    |||||    
T  25115860 gattt 25115864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 25174852 - 25174956
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  25174852 ttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccctttct 25174951  T
Q  659 gattt 663  Q
    |||||    
T  25174952 gattt 25174956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 3888242 - 3888345
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||| |||| |||||||  |||| ||||||| ||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  3888242 ttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 3888341  T
Q  660 attt 663  Q
    ||||    
T  3888342 attt 3888345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 34147561 - 34147458
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  ||||||||||||||||||||||||| | || |||||||||||||||||||| ||| ||  |||||||||||||||    
T  34147561 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttccccctttctg 34147462  T
Q  660 attt 663  Q
    ||||    
T  34147461 attt 34147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 2817149 - 2817254
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    ||||||||||||||||||  ||||||  |||| |||||||||||||||||| |||||| |||||||||||||||||||| ||| || ||||| |||||||    
T  2817149 ggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctatattttt-ccccttt 2817247  T
Q  657 ctgattt 663  Q
    |||||||    
T  2817248 ctgattt 2817254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 3888716 - 3888610
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| | | |||  |||| ||||||| ||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  3888716 ggtttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 3888617  T
Q  657 ctgattt 663  Q
    |||||||    
T  3888616 ctgattt 3888610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 43463756 - 43463861
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| ||| |||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||| ||||||    
T  43463756 ggtttaattgcacttttc-cccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccttt 43463854  T
Q  657 ctgattt 663  Q
    |||||||    
T  43463855 ctgattt 43463861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 557 - 634
Target Start/End: Original strand, 31569907 - 31569983
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttg 634  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||    
T  31569907 ggtttaattgcacttttc-cccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 31569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 19514528 - 19514632
Alignment:
Q  560 ttaattgcacttttcacccc-tatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttct 658  Q
    ||||||||||||| | |||| |||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||||||||    
T  19514528 ttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 19514627  T
Q  659 gattt 663  Q
    |||||    
T  19514628 gattt 19514632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 26020453 - 26020557
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    |||||||||||||||  ||||||||||||  ||||||||||||||||||||||| |||||    ||||||||||||||| ||||||||| ||||||||||    
T  26020453 ttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccgcatctttttgccccctttct 26020552  T
Q  659 gattt 663  Q
    |||||    
T  26020553 gattt 26020557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 25940524 - 25940627
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||| ||||  |||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||  ||||| |||||||||    
T  25940524 ttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcaccctttctg 25940623  T
Q  660 attt 663  Q
    ||||    
T  25940624 attt 25940627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 10098994 - 10098889
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| | |||||  |||||||||||||||||||||||||||||| ||||||||||||||||||   ||| ||  ||||||| ||||    
T  10098994 ggtttaattgcacttttc-ctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctcttt 10098896  T
Q  657 ctgattt 663  Q
    |||||||    
T  10098895 ctgattt 10098889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 34147144 - 34147245
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  || |||  ||| ||||||||||||||||||||||| || |||||||||||||||||||| ||| ||  |||||||||||||||    
T  34147144 ttaattgcacttttc--ccttatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttctg 34147241  T
Q  660 attt 663  Q
    ||||    
T  34147242 attt 34147245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 18433367 - 18433281
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||    
T  18433367 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttt 18433281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 22729011 - 22729112
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  ||||| ||||||||||||||||||  |||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  22729011 ttaattgcacttttc-cccctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgc-ccctatagttttccccctttctg 22729108  T
Q  660 attt 663  Q
    ||||    
T  22729109 attt 22729112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 25175202 - 25175115
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  25175202 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 25175115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 34576867 - 34576972
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctt 655  Q
    |||||||||||||||| | |||||||||||||  |||||||||||||| |||||||| |||||    ||||||||||||||||||||||||| |||||||    
T  34576867 ggtttaattgcactttcc-cccctatcttttgctaattgtgcgattttacaccccatcttttt-tttgagcgattttgcaccccatctttttgccccctt 34576964  T
Q  656 tctgattt 663  Q
    ||||||||    
T  34576965 tctgattt 34576972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 576 - 663
Target Start/End: Original strand, 42919323 - 42919410
Alignment:
Q  576 cccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||| ||||  ||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  42919323 cccctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttcccctttctgattt 42919410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 41072267 - 41072162
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    ||||||||| |||||||| | |||||  |||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  41072267 ggtttaattacacttttc-ctcctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcccccttt 41072169  T
Q  657 ctgattt 663  Q
    || ||||    
T  41072168 ctaattt 41072162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 25941065 - 25940961
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccat-ctttttccccctttct 658  Q
    ||||||||||||||| | |||||  ||||| |||| |||||||||||| |||||| |||||||||||||||||||| ||| ||  |||| ||||||||||    
T  25941065 ttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccctttct 25940966  T
Q  659 gattt 663  Q
    |||||    
T  25940965 gattt 25940961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 635
Target Start/End: Original strand, 37610205 - 37610279
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||||| |||||||  |||| |||||||| |||||||||||||||| ||||||||||||||||||||    
T  37610205 ttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgc 37610279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 635
Target Start/End: Original strand, 37780323 - 37780397
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||||| |||||||  |||| |||||||| |||||||||||||||| ||||||||||||||||||||    
T  37780323 ttaattgcacttttc-cccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgc 37780397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 11317028 - 11316922
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||  || || |  |||| ||||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  ||||||| ||||    
T  11317028 ggtttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttccctcttt 11316929  T
Q  657 ctgattt 663  Q
    |||||||    
T  11316928 ctgattt 11316922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 635
Target Start/End: Original strand, 10098522 - 10098597
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||||  | |||||  ||||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  10098522 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgc 10098597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 611
Target Start/End: Complemental strand, 25116112 - 25116061
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  25116112 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacccc 25116061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 22428937 - 22429021
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||| | |||||||||||||  ||||||||||||||||||||||| |||||    |||| |||||||||||||||||||    
T  22428937 ttaattgcactttcc-cccctatcttttgctaattgtgcgattttgcaccccatcttttt--ttgagcaattttgcaccccatctttt 22429021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 611
Target Start/End: Complemental strand, 33324889 - 33324838
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  33324889 ttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 34577214 - 34577129
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||  |||||||||||||  ||||||| ||||||||||||||| |||||    ||||||||||||||||||||||||    
T  34577214 ttaattgcacttttt-cccctatcttttgctaattgtgtgattttgcaccccatcttttt-tttgagcgattttgcaccccatctttt 34577129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 635
Target Start/End: Complemental strand, 37780793 - 37780718
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||| ||||||| |||||||  ||||  ||||||||||||||||||| |||  ||||||||||||||||||||    
T  37780793 ttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgc 37780718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 655
Target Start/End: Original strand, 11316714 - 11316812
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctt 655  Q
    |||||||||||||||||| | |||||  |||| ||||||| | |||||||| || ||| |||||||||||| ||||||| ||| ||  |||||||||||    
T  11316714 ggtttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctatagttttccccctt 11316812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 610
Target Start/End: Original strand, 41382893 - 41382945
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  41382893 ggtttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 636
Target Start/End: Complemental strand, 5187881 - 5187805
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgca 636  Q
    ||||||||||||||  ||| |||||||||| |||||||| |||||||||||| |||||||    |||||||||||||    
T  5187881 ttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccctatttttttttgagcgattttgca 5187805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 591 - 663
Target Start/End: Complemental strand, 37610638 - 37610567
Alignment:
Q  591 aattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||||||||||||||| |||  |||||||||||||||||||| ||| ||   ||||||||||||||||||    
T  37610638 aattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctat-agtttccccctttctgattt 37610567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 635
Target Start/End: Complemental strand, 2817625 - 2817551
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||||| |||||||  ||||  |||||||||||||| || || ||| ||||||||||||||||||||    
T  2817625 ttaattgcacttttc-cccctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgc 2817551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 22429246 - 22429188
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    ||||||||| ||||| |||||||||||||  ||||||||||||||||||||||| |||||    
T  22429246 ttaattgcatttttc-cccctatcttttgctaattgtgcgattttgcaccccatcttttt 22429188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 557 - 652
Target Start/End: Original strand, 30401882 - 30401977
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccc 652  Q
    ||||||||||||||||||  | ||||  |||| ||||||| | |||||||| |||||| |||||||| ||||||||||| ||| ||  ||||||||    
T  30401882 ggtttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctataattttcccc 30401977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 558 - 619
Target Start/End: Original strand, 9665558 - 9665617
Alignment:
Q  558 gtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    |||||||||||||||||  ||||||||||||  |||||||| |||||||||||||| |||||    
T  9665558 gtttaattgcacttttc--ccctatcttttgctaattgtgcaattttgcaccccatcttttt 9665617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 648
Target Start/End: Complemental strand, 16466793 - 16466708
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt 648  Q
    ||||||||||||||| ||||||| |||||  ||||||||||||||||| |   | |||||    |||||||||||||||||||||||||    
T  16466793 ttaattgcacttttcccccctatattttgctaattgtgcgattttgcatcaacttttttt---tgagcgattttgcaccccatcttttt 16466708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 609
Target Start/End: Original strand, 16726084 - 16726130
Alignment:
Q  563 attgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacc 16726130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 605
Target Start/End: Complemental strand, 12441244 - 12441196
Alignment:
Q  558 gtttaattgcacttttcacccctatctttt-gtcaattgtgcgattttg 605  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  12441244 gtttaattgcacttttgccccctatctttttgtcaattgtgcgattttg 12441196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 23011434 - 23011383
Alignment:
Q  558 gtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    ||||||||||||||||  ||| |||||||||| ||||||||||||||||||||    
T  23011434 gtttaattgcacttttt-cccttatcttttgttaattgtgcgattttgcaccc 23011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 664
Target Start/End: Complemental strand, 41383217 - 41383117
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||| ||||||| ||||||| |||||  ||||||||||||||||||||| | |||||     |||||||||||| |||||||||||  |||||||||    
T  41383217 ttaattgaacttttc-cccctattttttgctaattgtgcgattttgcacccctttttttt----tagcgattttgcatcccatctttttgtcccctttct 41383123  T
Q  659 gatttg 664  Q
     |||||    
T  41383122 catttg 41383117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 619
Target Start/End: Complemental strand, 22629579 - 22629516
Alignment:
Q  557 ggtttaattgcacttttcacc-cctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    |||||||||||||||||  || ||||||||||||||||| ||  |||||||||||||| |||||    
T  22629579 ggtttaattgcactttttccctcctatcttttgtcaattatgtaattttgcaccccattttttt 22629516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 626 - 663
Target Start/End: Complemental strand, 22429210 - 22429172
Alignment:
Q  626 gcgattttgcaccccatcttttt-ccccctttctgattt 663  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22429210 gcgattttgcaccccatctttttgccccctttctgattt 22429172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 1e-55; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 6002240 - 6002374
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6002240 ttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 6002339  T
Q  660 atttggagg-cccccatgtgttttagtgatgatgt 693  Q
    ||||||||| ||||||||  |||||||||||||||    
T  6002340 atttggaggccccccatgaattttagtgatgatgt 6002374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 560 - 673
Target Start/End: Original strand, 49284412 - 49284525
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49284412 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctg 49284511  T
Q  660 atttggaggccccc 673  Q
    ||||||||||||||    
T  49284512 atttggaggccccc 49284525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 560 - 693
Target Start/End: Complemental strand, 6002945 - 6002810
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  6002945 ttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatctttttccccctttctg 6002846  T
Q  660 atttggaggc--ccccatgtgttttagtgatgatgt 693  Q
    ||||||||||  ||||||||||||||||||||||||    
T  6002845 atttggaggcccccccatgtgttttagtgatgatgt 6002810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 580 - 693
Target Start/End: Complemental strand, 49285086 - 49284972
Alignment:
Q  580 tatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgatttggaggc-ccccatgtg 678  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49285086 tatcttttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccctttctgatttggaggccccccatgtg 49284987  T
Q  679 ttttagtgatgatgt 693  Q
    |||||||||||||||    
T  49284986 ttttagtgatgatgt 49284972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 39692051 - 39691948
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||||||||||    
T  39692051 ttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttccccctttctg 39691952  T
Q  660 attt 663  Q
    ||||    
T  39691951 attt 39691948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 28634211 - 28634105
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||  ||||||||||||    
T  28634211 ggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttcccccttt 28634112  T
Q  657 ctgattt 663  Q
    |||||||    
T  28634111 ctgattt 28634105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 48104678 - 48104784
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  48104678 ggtttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 48104777  T
Q  657 ctgattt 663  Q
    |||||||    
T  48104778 ctgattt 48104784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 9347129 - 9347232
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  9347129 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 9347228  T
Q  660 attt 663  Q
    ||||    
T  9347229 attt 9347232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 20480171 - 20480273
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  20480171 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 20480269  T
Q  660 attt 663  Q
    ||||    
T  20480270 attt 20480273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 26814697 - 26814800
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  ||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  26814697 ttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 26814796  T
Q  660 attt 663  Q
    ||||    
T  26814797 attt 26814800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 26815170 - 26815067
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  26815170 ttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttctg 26815071  T
Q  660 attt 663  Q
    ||||    
T  26815070 attt 26815067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 46823843 - 46823949
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||  |||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||  ||||||||||||    
T  46823843 ggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttcccccttt 46823942  T
Q  657 ctgattt 663  Q
    |||||||    
T  46823943 ctgattt 46823949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 50430135 - 50430029
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||| ||||||    
T  50430135 ggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccttt 50430036  T
Q  657 ctgattt 663  Q
    |||||||    
T  50430035 ctgattt 50430029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 47955309 - 47955413
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  47955309 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 47955408  T
Q  659 gattt 663  Q
    |||||    
T  47955409 gattt 47955413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 27172119 - 27172221
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  27172119 ttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 27172217  T
Q  660 attt 663  Q
    ||||    
T  27172218 attt 27172221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 32163094 - 32162991
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||  ||  |||||||||||||||    
T  32163094 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccccctttctg 32162995  T
Q  660 attt 663  Q
    ||||    
T  32162994 attt 32162991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 48105167 - 48105064
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  48105167 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48105068  T
Q  660 attt 663  Q
    ||||    
T  48105067 attt 48105064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 50526523 - 50526420
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  50526523 ttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 50526424  T
Q  660 attt 663  Q
    ||||    
T  50526423 attt 50526420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 50615671 - 50615569
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||  |||||||||||||||    
T  50615671 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctg 50615573  T
Q  660 attt 663  Q
    ||||    
T  50615572 attt 50615569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 50623499 - 50623397
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||  |||||||||||||||    
T  50623499 ttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctg 50623401  T
Q  660 attt 663  Q
    ||||    
T  50623400 attt 50623397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 42611668 - 42611562
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||| ||  |||| |||||||    
T  42611668 ggtttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttccccttt 42611569  T
Q  657 ctgattt 663  Q
    |||||||    
T  42611568 ctgattt 42611562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 13918449 - 13918552
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  | |||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  13918449 ttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 13918548  T
Q  660 attt 663  Q
    ||||    
T  13918549 attt 13918552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 21687028 - 21687131
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||||||||||||  ||||||||||||||| |||||||||||||||||||| ||| ||  |||||| ||||||||    
T  21687028 ttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcctttctg 21687127  T
Q  660 attt 663  Q
    ||||    
T  21687128 attt 21687131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 28633723 - 28633826
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||| |||  |||| ||||||| ||||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  28633723 ttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 28633822  T
Q  660 attt 663  Q
    ||||    
T  28633823 attt 28633826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 44911028 - 44911131
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||  ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  44911028 ttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctg 44911127  T
Q  660 attt 663  Q
    ||||    
T  44911128 attt 44911131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 42611185 - 42611291
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| ||| |||  |||| |||||||||||||||||||| |||| ||||||||||||||||||||  || ||  ||||||||||||    
T  42611185 ggtttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttcccccttt 42611284  T
Q  657 ctgattt 663  Q
    |||||||    
T  42611285 ctgattt 42611291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 999575 - 999473
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||   ||| |||||||||||||||||| |||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  999575 ttaattgcacttttc-cccctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttccccctttctg 999477  T
Q  660 attt 663  Q
    ||||    
T  999476 attt 999473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 6703945 - 6703842
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||| ||||||||||||||| ||||||||||||||||||||  |  ||  |||||||||||||||    
T  6703945 ttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcctcatatagttttccccctttctg 6703846  T
Q  660 attt 663  Q
    ||||    
T  6703845 attt 6703842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 9347601 - 9347499
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| | |||||||  |||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||||||    
T  9347601 ttaattgcactttcc-cccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 9347503  T
Q  660 attt 663  Q
    ||||    
T  9347502 attt 9347499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 22149753 - 22149649
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||| | | |||||     |||||||||||||||||||||||| |||||||    
T  22149753 ggtttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacctccttttttt--tttagcgattttgcaccccatctttttgccccttt 22149656  T
Q  657 ctgattt 663  Q
    |||||||    
T  22149655 ctgattt 22149649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 557 - 635
Target Start/End: Original strand, 999112 - 999189
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  999112 ggtttaattgcacttttc-cccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgc 999189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 664
Target Start/End: Complemental strand, 19008801 - 19008697
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||  ||||||||||||||||||||||||| ||| ||||| || ||||||| ||| ||  |||||||||||||||    
T  19008801 ttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttccccctttctg 19008702  T
Q  660 atttg 664  Q
    |||||    
T  19008701 atttg 19008697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 31848243 - 31848158
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||| | |||||   |||||||||||||||||||||||||    
T  31848243 ttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctcttttt--tcgagcgattttgcaccccatctttt 31848158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 626 - 693
Target Start/End: Complemental strand, 48191369 - 48191302
Alignment:
Q  626 gcgattttgcaccccatctttttccccctttctgatttggaggc-ccccatgtgttttagtgatgatgt 693  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  48191369 gcgattttgcaccccatctttt-ccccctttctgatttggaggccccccatgtgttttagtgatgatgt 48191302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 27172592 - 27172490
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| ||||| |  |||| |||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||||||||||    
T  27172592 ttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttgc-ccctatagttttccccctttctg 27172494  T
Q  660 attt 663  Q
    ||||    
T  27172493 attt 27172490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 46824329 - 46824226
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  | |||||  |||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||  |||||||||||| ||    
T  46824329 ttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttttg 46824230  T
Q  660 attt 663  Q
    ||||    
T  46824229 attt 46824226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 48190774 - 48190833
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  48190774 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 48190833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 49317755 - 49317857
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  |||| ||||||||| |||||||| |||||| |||||||||||||||||| | ||| ||  |||||||||||||||    
T  49317755 ttaattgcacttttc-cccctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttccccctttctg 49317853  T
Q  660 attt 663  Q
    ||||    
T  49317854 attt 49317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 49318216 - 49318114
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||| | |||||||  |||| |||||||||||||||||| |||||| ||| |||||||||||||||| ||| ||  |||||||||||||||    
T  49318216 ttaattgcactttcc-cccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctg 49318118  T
Q  660 attt 663  Q
    ||||    
T  49318117 attt 49318114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 20371403 - 20371300
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc-atatttttaaacgagcgattttgcaccccatctttttccccctttct 658  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||||||||| ||| |||||||||||| ||||||| ||| ||  ||| ||||||||||    
T  20371403 ttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctttct 20371305  T
Q  659 gattt 663  Q
    |||||    
T  20371304 gattt 20371300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 33085674 - 33085775
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||| |||||||  |||||| |||||||||||||  ||||||||||||||| |||  |||||| |||||||||||| |||| |||||| ||||||||    
T  33085674 ttaattgtacttttccaccctatattttgtcaattgtttgattttgcaccccatgttt--aaacgaacgattttgcacctcatccttttcctcctttctg 33085771  T
Q  660 attt 663  Q
    ||||    
T  33085772 attt 33085775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 626 - 693
Target Start/End: Original strand, 48190811 - 48190879
Alignment:
Q  626 gcgattttgcaccccatctttttccccctttctgatttggagg-cccccatgtgttttagtgatgatgt 693  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||    
T  48190811 gcgattttgcaccccatctttttccccctttctaatttggaggccccccatgaattttagtgatgatgt 48190879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 558 - 652
Target Start/End: Original strand, 1176837 - 1176932
Alignment:
Q  558 gtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacg-agcgattttgcaccccatctttttcccc 652  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||||||||||| | |||||    | ||||||||||||||||||||||| ||||    
T  1176837 gtttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccctctttttttttgtagcgattttgcaccccatcttttgcccc 1176932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 4692484 - 4692381
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  |||| ||||||||| ||||||||||||||| |||||||||||||||||| |  || ||  |||| ||||||||||    
T  4692484 ttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctatagtttttcccctttctg 4692385  T
Q  660 attt 663  Q
    ||||    
T  4692384 attt 4692381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 6703463 - 6703566
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  | |||||  |||  |||||||||||||||||||| |||| |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  6703463 ttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccttttctg 6703562  T
Q  660 attt 663  Q
    ||||    
T  6703563 attt 6703566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 8109044 - 8108985
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatattttt 619  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  8109044 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatcttttt 8108985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 13918918 - 13918815
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  ||||||  |||| |||||||||||||||||||| |||| |||||||||| ||||||||| ||| ||  ||||||||| || ||    
T  13918918 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctatagttttccccccttttg 13918819  T
Q  660 attt 663  Q
    ||||    
T  13918818 attt 13918815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 47955659 - 47955572
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  47955659 ttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 47955572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 647
Target Start/End: Original strand, 8108721 - 8108810
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  8108721 ggtttaattgcacttttcctccctatcttttgttaattgtgcgattttgcaccccct-tttttttttgagcgattttgcaccctatctttt 8108810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 44911491 - 44911385
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttcccccttt 656  Q
    |||||||||||| ||||  |||||||  |||| ||||||||||||||||||||| ||  ||| |||||||||||||||| ||| ||  |||||| |||||    
T  44911491 ggtttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctatagttttcctccttt 44911392  T
Q  657 ctgattt 663  Q
    |||||||    
T  44911391 ctgattt 44911385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 618
Target Start/End: Complemental strand, 48191406 - 48191348
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttt 618  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  48191406 ttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccatctttt 48191348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 561 - 663
Target Start/End: Complemental strand, 50949615 - 50949513
Alignment:
Q  561 taattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctga 660  Q
    |||||||||||| | |||||||  ||||||||||||||||||||||| | |||  ||| |||||||||||||||| ||| ||  |||| |||||||||||    
T  50949615 taattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctatagtttttcccctttctga 50949516  T
Q  661 ttt 663  Q
    |||    
T  50949515 ttt 50949513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 17518652 - 17518551
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    |||| |||||||| ||||||||||| ||||||||||    
T  17518652 ttaattgcacttttc-cccctatcttttgccaattgtgcgattttgcaccccctcttttt-tttgagcaattttgca-cccatctttttgccccctttct 17518556  T
Q  659 gattt 663  Q
    |||||    
T  17518555 gattt 17518551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 635
Target Start/End: Original strand, 20371043 - 20371116
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||| |  ||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  20371043 ttaattgcactttcc--ccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 20371116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 632
Target Start/End: Complemental strand, 20480662 - 20480591
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattt 632  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  20480662 ttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt 20480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 664
Target Start/End: Original strand, 31847895 - 31848002
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctt 655  Q
    |||||||||||||||| | ||| |||||||||  |||||||| |||||||| |||||||||||    |||||||||||||||| |||||||| |||||||    
T  31847895 ggtttaattgcactttacccccttatcttttgctaattgtgcaattttgcatcccatatttttttt-gagcgattttgcacccgatctttttgccccctt 31847993  T
Q  656 tctgatttg 664  Q
    |||| ||||    
T  31847994 tctggtttg 31848002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 41082912 - 41083015
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||| ||||||  ||||||||||||| |||||||||||||||||| ||| | |||||     |||||||||||||||||||||||| ||||||||||    
T  41082912 ttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctcttttt-ttttagcgattttgcaccccatctttttgccccctttct 41083010  T
Q  659 gattt 663  Q
    |||||    
T  41083011 gattt 41083015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 633
Target Start/End: Complemental strand, 49318493 - 49318421
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgatttt 633  Q
    ||||||||| ||||| |||||||  ||| ||||||||||||||||||| |||||| ||||||||||||||||||    
T  49318493 ttaattgcatttttc-cccctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgatttt 49318421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 50429690 - 50429762
Alignment:
Q  591 aattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||| ||  |||||  ||||||||||||    
T  50429690 aattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcatcctttctgattt 50429762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 17518306 - 17518392
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    |||||||||| |||| ||| |||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  17518306 ttaattgcacctttc-cccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 17518392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 21687517 - 21687415
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||| ||||||||| |||||||  |||| |||||||||||||||| ||| |||| |||||||||||||||||| | | |  |  |||||||||||||||    
T  21687517 ttaatagcacttttc-cccctataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttttccctctgtagttttccccctttctg 21687419  T
Q  660 attt 663  Q
    ||||    
T  21687418 attt 21687415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 22149406 - 22149490
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| ||||||||||| || ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||    
T  22149406 ttaattgcacttttc-cccctatctttggt-aattgtgcgattttgcaccccctcttttt-tttgagcgattttgcaccccatctttt 22149490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 590 - 663
Target Start/End: Complemental strand, 44224140 - 44224067
Alignment:
Q  590 caattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||  ||| ||  |||| ||||||||||||||    
T  44224140 caattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttacccctttctgattt 44224067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 611
Target Start/End: Complemental strand, 13589709 - 13589659
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  13589709 ttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcacccc 13589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 611
Target Start/End: Complemental strand, 41083261 - 41083211
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||||||||    
T  41083261 ttaattgcacttttc-cccctatcttttgttagttgtgcgattttgcacccc 41083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 606
Target Start/End: Original strand, 50615243 - 50615289
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgc 606  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||    
T  50615243 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 606
Target Start/End: Original strand, 50623071 - 50623117
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgc 606  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||    
T  50623071 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 613
Target Start/End: Complemental strand, 47498545 - 47498493
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat 613  Q
    ||||||||||||||| |||||||  ||||||||||||||| |||||||||||||    
T  47498545 ttaattgcacttttc-cccctatagtttgtcaattgtgcggttttgcaccccat 47498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 663
Target Start/End: Original strand, 24671283 - 24671360
Alignment:
Q  584 ttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||| ||||||||||||||||||| ||||  ||||||  ||||||||||||||||  | |||| |||||||| ||||||    
T  24671283 ttttgccaattgtgcgattttgcactccatccttttaattgagcgattttgcaccc--ttttttaccccctttttgattt 24671360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 635
Target Start/End: Original strand, 47498304 - 47498377
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||| |  ||||||  |||| ||||||||| |||||||| |||||| |||||||| |||||||||||    
T  47498304 ttaattgcactttcc--ccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgc 47498377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 633
Target Start/End: Original strand, 50949161 - 50949237
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgatttt 633  Q
    |||||||||| ||||||| | |||||  | || |||||||||||||||||||| |||  ||| ||||||||||||||    
T  50949161 ggtttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 611
Target Start/End: Complemental strand, 1177072 - 1177018
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||||||  |||||||||| |  |||||||| ||||||||||||    
T  1177072 ggtttaattgcacttttcctccctatctttcgctaattgtgcaattttgcacccc 1177018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 585 - 627
Target Start/End: Original strand, 32162757 - 32162799
Alignment:
Q  585 tttgtcaattgtgcgattttgcaccccatatttttaaacgagc 627  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||    
T  32162757 tttgccaattgtgcaattttgcaccccatagttttaaacgagc 32162799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 333 - 436
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| ||  |||||||| ||||||    
T  333 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 432  T
Q  660 attt 663  Q
    ||||    
T  433 attt 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 635
Target Start/End: Complemental strand, 813 - 739
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||||  |||||||  |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  813 ttaattgcacttttt-cccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgc 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 1471 - 1367
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  1471 ttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 1372  T
Q  659 gattt 663  Q
    |||||    
T  1371 gattt 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 1121 - 1208
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||||| | |||||    |||||||||||||||| |||||||    
T  1121 ttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 45857 - 45754
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  45857 ttaattgcacttttc-cccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 45759  T
Q  659 gattt 663  Q
    |||||    
T  45758 gattt 45754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 45540 - 45626
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| || | |||||    |||||||||||||||| |||||||    
T  45540 ttaattgcacttttc-cccctatcttttgttaattgtgcgattttgcactccctctttttttttgagcgattttgcaccctatctttt 45626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 185325 - 185222
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    |||||||||||||||  ||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  ||||||| |||||||    
T  185325 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttctg 185226  T
Q  660 attt 663  Q
    ||||    
T  185225 attt 185222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 184842 - 184945
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||| || ||||  |||||||| ||||| ||||||||||||||| ||||||||||||||||||||  || ||  |||||||||||||||    
T  184842 ttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttccccctttctg 184941  T
Q  660 attt 663  Q
    ||||    
T  184942 attt 184945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 6747 - 6644
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| ||||||||||    
T  6747 ttaattgcacttttc-cccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctttct 6649  T
Q  659 gattt 663  Q
    |||||    
T  6648 gattt 6644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 6397 - 6485
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat-atttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| |  |||||     |||||||||||||||||||||||    
T  6397 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttttagcgattttgcaccccatctttt 6485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 25420 - 25316
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||    ||||||||||||||||||||||||| |||| |||||    
T  25420 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccatttct 25321  T
Q  659 gattt 663  Q
    |||||    
T  25320 gattt 25316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 38746 - 38643
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  |||||||  |||| ||||||||||||||||||||||||| | |||||||| ||||||||| ||| ||  |||||||||||||||    
T  38746 ttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttccccctttctg 38647  T
Q  660 attt 663  Q
    ||||    
T  38646 attt 38643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 589 - 663
Target Start/End: Original strand, 38283 - 38357
Alignment:
Q  589 tcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 663  Q
    ||||||||||||||||||| |||||| ||||||| |||||||||||| ||| ||  ||||||| |||||||||||    
T  38283 tcaattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctgattt 38357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 9908 - 10012
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc-atatttttaaacgagcgattttgcaccccatctttttccccctttct 658  Q
    ||||||||||||||  |||||||  |||| ||||||||||||||| |||||| ||| |||||||||||||||||||| ||| ||  ||||||||||||||    
T  9908 ttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttccccctttct 10007  T
Q  659 gattt 663  Q
    |||||    
T  10008 gattt 10012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 51; Significance: 7e-20; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 560 - 646
Target Start/End: Original strand, 438933 - 439019
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttt 646  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||| | |||||    |||||||||||||||||||||||    
T  438933 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatcttt 439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 610
Target Start/End: Original strand, 183364 - 183416
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccc 610  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  183364 ggtttaattgcacttttc-cccctatcttttgtcaattgtacgattttgcaccc 183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 439250 - 439165
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||  ||| |||||||||  ||||||||||||||||| ||| | |||||    ||||||||||||||||||||||||    
T  439250 ttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctcttttt--ttgagcgattttgcaccccatctttt 439165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 653
Target Start/End: Complemental strand, 183713 - 183621
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatt-tttaaacgagcgattttgcaccccatctttttccccc 653  Q
    ||||||||||||||| ||||||| |||||  |||||||||| |||||||||| | || ||||   ||||||||||||| ||||||||||| ||||    
T  183713 ttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctcttctttatttgagcgattttgca-cccatctttttgcccc 183621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Complemental strand, 50557 - 50454
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc-atatttttaaacgagcgattttgcaccccatctttttccccctttct 658  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||||||||| ||| |||||||||||| ||||||| ||| ||  ||| ||||||||||    
T  50557 ttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctttct 50459  T
Q  659 gattt 663  Q
    |||||    
T  50458 gattt 50454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 560 - 635
Target Start/End: Original strand, 50078 - 50151
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||||||| |  ||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  50078 ttaattgcactttcc--ccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgc 50151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 411926 - 412028
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatcttttt-ccccctttct 658  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||| | |||||     ||||||||||||||| |||||||| ||||||||||    
T  411926 ttaattgcactttac-cccctatcttttgtcaattgtgcgattttgcaccccctcttttt-tttaagcgattttgcaccctatctttttgccccctttct 412023  T
Q  659 gattt 663  Q
    |||||    
T  412024 gattt 412028  T

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Target: scaffold0176 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 635
Target Start/End: Original strand, 19624 - 19698
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 635  Q
    ||||||||| ||||| ||| |||  |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  19624 ttaattgcaattttc-cccatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgc 19698  T

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Target: scaffold0176; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 623
Target Start/End: Complemental strand, 20094 - 20031
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaac 623  Q
    ||||||||||||||| ||| |||  |||||||||||||||||||||| ||||||| ||||||||    
T  20094 ttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaac 20031  T

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Target: scaffold1221 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 609
Target Start/End: Complemental strand, 1837 - 1786
Alignment:
Q  557 ggtttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  1837 ggtttaattgcacttttc-cccctatcttttgtttattgtgcgattttgcacc 1786  T

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Target: scaffold1221; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 613
Target Start/End: Original strand, 1514 - 1566
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat 613  Q
    ||||||||||||||  || |||||||||| |||||||| |||||||||||||||    
T  1514 ttaattgcacttttt-cctctatcttttgccaattgtgtgattttgcaccccat 1566  T

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Target: scaffold0535 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 560 - 659
Target Start/End: Original strand, 10015 - 10114
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctg 659  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||| || ||  ||||||  || |||||||| || |  |||||| |||||||||||    
T  10015 ttaattgcacttttgccccctatcttttgccaattgtacgattttgcatccaatccttttaattgaacgattttgtacactctcttttgccccctttctg 10114  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 576 - 663
Target Start/End: Original strand, 16870 - 16960
Alignment:
Q  576 cccctatcttttgtcaattgtgcgattttgcaccccatatttttaaac--gagcgattttgcaccccatctttttcc-ccctttctgattt 663  Q
    |||||||||||||  |||||||||||| |||||||| | |||||      ||||||||||||||||||||||||||| |||||||||||||    
T  16870 cccctatcttttgctaattgtgcgattatgcaccccctctttttttttttgagcgattttgcaccccatctttttcctccctttctgattt 16960  T

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Target: scaffold0015; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 647
Target Start/End: Complemental strand, 17206 - 17119
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc-ccatatttttaaacgagcgattttgcaccccatctttt 647  Q
    ||||||||||||||| |||||||||||||  |||||||| |||||||||| ||   |||||    ||||||||||||||||||||||||    
T  17206 ttaattgcacttttc-cccctatcttttgctaattgtgcaattttgcaccgcctcttttttttttgagcgattttgcaccccatctttt 17119  T

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Target: scaffold0035 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 558 - 611
Target Start/End: Original strand, 73087 - 73141
Alignment:
Q  558 gtttaattgcacttttcacccctatctttt-gtcaattgtgcgattttgcacccc 611  Q
    ||||||||||||||||  |||||||||||| ||||| ||||||||||||||||||    
T  73087 gtttaattgcacttttgtcccctatctttttgtcaactgtgcgattttgcacccc 73141  T

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Target: scaffold0598 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 609
Target Start/End: Original strand, 6610 - 6659
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacc 609  Q
    ||||||||||| ||| |||||||||||||| ||||||| |||||||||||    
T  6610 ttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

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Target: scaffold0376 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 613
Target Start/End: Original strand, 7458 - 7510
Alignment:
Q  560 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat 613  Q
    ||||||||||||||  |||||||||||||  |||| ||||||||||||||||||    
T  7458 ttaattgcacttttt-cccctatcttttgctaattatgcgattttgcaccccat 7510  T

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