View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10365_high_16 (Length: 357)

Name: NF10365_high_16
Description: NF10365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10365_high_16
NF10365_high_16
[»] scaffold0024 (3 HSPs)
scaffold0024 (63-327)||(21161-21427)
scaffold0024 (2-200)||(58798-58995)
scaffold0024 (238-339)||(58990-59091)
[»] chr1 (38 HSPs)
chr1 (60-185)||(15784253-15784380)
chr1 (80-154)||(7028230-7028304)
chr1 (60-142)||(37841916-37841998)
chr1 (83-179)||(10744249-10744346)
chr1 (78-142)||(836409-836473)
chr1 (66-142)||(9572178-9572254)
chr1 (76-142)||(34952149-34952215)
chr1 (66-142)||(23544710-23544786)
chr1 (88-132)||(47432042-47432086)
chr1 (65-140)||(51190784-51190859)
chr1 (64-138)||(8852782-8852856)
chr1 (81-143)||(45145165-45145227)
chr1 (80-142)||(49888705-49888767)
chr1 (89-142)||(15687143-15687196)
chr1 (65-142)||(41163074-41163151)
chr1 (62-142)||(9656566-9656650)
chr1 (91-142)||(36070199-36070250)
chr1 (81-140)||(36151577-36151636)
chr1 (91-142)||(45990128-45990179)
chr1 (61-123)||(7137090-7137152)
chr1 (88-138)||(30582022-30582072)
chr1 (80-142)||(34619448-34619510)
chr1 (92-138)||(41184724-41184770)
chr1 (88-138)||(41505633-41505682)
chr1 (105-154)||(1729670-1729719)
chr1 (81-142)||(4256112-4256173)
chr1 (81-154)||(27140424-27140497)
chr1 (63-132)||(30581723-30581792)
chr1 (67-144)||(46252750-46252827)
chr1 (105-142)||(47498906-47498943)
chr1 (244-276)||(601163-601195)
chr1 (88-140)||(1232964-1233016)
chr1 (114-142)||(5243550-5243578)
chr1 (86-138)||(14576727-14576779)
chr1 (94-138)||(15477530-15477574)
chr1 (88-128)||(30043855-30043895)
chr1 (82-142)||(37842425-37842485)
chr1 (88-132)||(46499934-46499978)
[»] chr8 (18 HSPs)
chr8 (62-139)||(41475133-41475210)
chr8 (60-144)||(37444483-37444567)
chr8 (60-142)||(16210956-16211038)
chr8 (66-142)||(3537101-3537177)
chr8 (81-139)||(7646145-7646203)
chr8 (64-154)||(26215418-26215508)
chr8 (71-142)||(14280471-14280542)
chr8 (95-142)||(42237492-42237539)
chr8 (64-142)||(3936771-3936849)
chr8 (88-138)||(12497305-12497355)
chr8 (92-142)||(35374443-35374493)
chr8 (79-133)||(42597338-42597392)
chr8 (81-142)||(2364543-2364604)
chr8 (81-138)||(4558737-4558794)
chr8 (88-137)||(35534686-35534734)
chr8 (88-145)||(35534928-35534985)
chr8 (135-179)||(27049367-27049411)
chr8 (86-138)||(29205752-29205804)
[»] chr3 (26 HSPs)
chr3 (62-177)||(34637998-34638115)
chr3 (64-142)||(25447314-25447392)
chr3 (81-154)||(2128309-2128382)
chr3 (60-180)||(20669097-20669218)
chr3 (62-138)||(49465738-49465813)
chr3 (83-150)||(42809242-42809309)
chr3 (88-138)||(30956700-30956750)
chr3 (88-138)||(30972512-30972562)
chr3 (88-154)||(42808925-42808991)
chr3 (76-142)||(44061093-44061159)
chr3 (64-140)||(402614-402689)
chr3 (64-140)||(31403280-31403356)
chr3 (60-140)||(52597607-52597686)
chr3 (88-139)||(15304420-15304471)
chr3 (88-138)||(24684897-24684947)
chr3 (92-142)||(33405237-33405287)
chr3 (88-142)||(37689454-37689508)
chr3 (60-124)||(30574002-30574064)
chr3 (65-133)||(46030911-46030980)
chr3 (82-142)||(1395611-1395671)
chr3 (88-140)||(10101548-10101600)
chr3 (88-140)||(10212473-10212525)
chr3 (64-124)||(34235164-34235224)
chr3 (64-140)||(35328236-35328311)
chr3 (111-139)||(39921744-39921772)
chr3 (88-132)||(46778307-46778351)
[»] chr6 (24 HSPs)
chr6 (63-142)||(9093626-9093705)
chr6 (64-178)||(264293-264407)
chr6 (80-142)||(29274299-29274361)
chr6 (64-142)||(32206090-32206168)
chr6 (61-137)||(33736757-33736833)
chr6 (65-136)||(9559617-9559688)
chr6 (81-144)||(20671933-20671996)
chr6 (61-131)||(4163094-4163164)
chr6 (61-131)||(4224715-4224785)
chr6 (88-138)||(8147648-8147698)
chr6 (104-154)||(21539146-21539196)
chr6 (80-154)||(34584295-34584369)
chr6 (90-142)||(3785770-3785822)
chr6 (64-132)||(33117464-33117532)
chr6 (95-142)||(28621180-28621227)
chr6 (88-147)||(35070695-35070754)
chr6 (88-138)||(24626241-24626291)
chr6 (81-139)||(24836272-24836330)
chr6 (65-143)||(31624007-31624085)
chr6 (81-180)||(2455204-2455305)
chr6 (80-145)||(3217257-3217322)
chr6 (88-133)||(11363447-11363492)
chr6 (88-132)||(30536638-30536682)
chr6 (88-132)||(34405051-34405095)
[»] chr5 (27 HSPs)
chr5 (65-142)||(12425494-12425571)
chr5 (68-154)||(465880-465966)
chr5 (88-153)||(11615454-11615519)
chr5 (64-202)||(39105386-39105533)
chr5 (65-141)||(7674571-7674647)
chr5 (64-142)||(42569050-42569128)
chr5 (65-141)||(9202819-9202895)
chr5 (67-180)||(4014448-4014569)
chr5 (83-142)||(14932231-14932289)
chr5 (60-122)||(28776893-28776955)
chr5 (88-138)||(35446001-35446051)
chr5 (62-142)||(3566388-3566468)
chr5 (88-132)||(42500305-42500349)
chr5 (64-135)||(11835199-11835270)
chr5 (80-139)||(37112331-37112390)
chr5 (88-138)||(3932759-3932809)
chr5 (64-102)||(6096465-6096503)
chr5 (135-180)||(7984969-7985015)
chr5 (79-140)||(4855635-4855696)
chr5 (88-133)||(10363696-10363741)
chr5 (80-153)||(11054124-11054196)
chr5 (243-280)||(42646792-42646829)
chr5 (60-132)||(5963362-5963434)
chr5 (88-132)||(9107058-9107102)
chr5 (64-132)||(19460466-19460534)
chr5 (88-140)||(39594754-39594805)
chr5 (62-142)||(41819532-41819612)
[»] chr4 (32 HSPs)
chr4 (64-142)||(3155525-3155603)
chr4 (62-142)||(1706542-1706622)
chr4 (64-142)||(51630033-51630111)
chr4 (83-140)||(17884009-17884066)
chr4 (65-142)||(26520299-26520376)
chr4 (78-142)||(25885795-25885859)
chr4 (105-180)||(47800593-47800669)
chr4 (80-140)||(437504-437565)
chr4 (64-129)||(50662815-50662880)
chr4 (89-138)||(50681163-50681212)
chr4 (88-132)||(43505902-43505946)
chr4 (64-127)||(6364071-6364134)
chr4 (111-142)||(27043900-27043931)
chr4 (64-142)||(49004042-49004118)
chr4 (80-138)||(7601697-7601755)
chr4 (88-138)||(17204084-17204134)
chr4 (112-150)||(22539116-22539154)
chr4 (88-154)||(22684574-22684640)
chr4 (92-142)||(23459578-23459628)
chr4 (88-138)||(41336707-41336756)
chr4 (80-138)||(44138497-44138555)
chr4 (60-125)||(2733238-2733303)
chr4 (93-142)||(25332725-25332774)
chr4 (88-137)||(25904285-25904334)
chr4 (64-141)||(44249208-44249285)
chr4 (81-142)||(52326179-52326240)
chr4 (65-149)||(2987112-2987196)
chr4 (93-133)||(13216283-13216323)
chr4 (81-133)||(20907112-20907164)
chr4 (81-121)||(21193937-21193977)
chr4 (90-154)||(41701499-41701563)
chr4 (60-132)||(44863042-44863114)
[»] chr2 (28 HSPs)
chr2 (64-138)||(42420368-42420442)
chr2 (66-142)||(42457872-42457948)
chr2 (80-202)||(3611164-3611295)
chr2 (64-132)||(4026739-4026807)
chr2 (64-131)||(39567825-39567892)
chr2 (80-142)||(18962108-18962170)
chr2 (80-142)||(25609734-25609796)
chr2 (80-142)||(28902015-28902077)
chr2 (88-142)||(35459856-35459910)
chr2 (88-138)||(41241206-41241256)
chr2 (88-138)||(42868535-42868585)
chr2 (231-272)||(40672750-40672791)
chr2 (90-134)||(10619293-10619337)
chr2 (105-180)||(16451088-16451164)
chr2 (65-137)||(23747227-23747299)
chr2 (60-136)||(26143717-26143792)
chr2 (62-147)||(44600459-44600546)
chr2 (64-139)||(9395052-9395127)
chr2 (66-130)||(13220378-13220438)
chr2 (77-140)||(34339841-34339904)
chr2 (88-138)||(12464547-12464597)
chr2 (88-138)||(13325516-13325566)
chr2 (65-142)||(36114342-36114419)
chr2 (93-138)||(41851486-41851531)
chr2 (69-142)||(42907286-42907359)
chr2 (80-133)||(44119722-44119775)
chr2 (92-132)||(32592537-32592577)
chr2 (105-141)||(36114594-36114630)
[»] chr7 (20 HSPs)
chr7 (63-132)||(40009391-40009460)
chr7 (84-152)||(26935610-26935678)
chr7 (81-140)||(28613606-28613665)
chr7 (81-144)||(30133988-30134051)
chr7 (60-142)||(20881706-20881788)
chr7 (100-142)||(30180009-30180051)
chr7 (88-131)||(119856-119899)
chr7 (91-142)||(40689056-40689107)
chr7 (76-142)||(36874035-36874101)
chr7 (135-193)||(39393589-39393647)
chr7 (88-130)||(45806408-45806450)
chr7 (88-138)||(46078093-46078143)
chr7 (81-142)||(22759125-22759186)
chr7 (243-280)||(33266397-33266434)
chr7 (93-142)||(34083595-34083644)
chr7 (92-129)||(45004716-45004753)
chr7 (81-141)||(1417203-1417263)
chr7 (106-142)||(8094234-8094270)
chr7 (80-140)||(35536045-35536105)
chr7 (88-132)||(43152982-43153026)


Alignment Details
Target: scaffold0024 (Bit Score: 179; Significance: 2e-96; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 63 - 327
Target Start/End: Complemental strand, 21427 - 21161
Alignment:
Q  63 acttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagcg-tcttgg 161  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||  | ||||    
T  21427 acttaccatgataagcacttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataagctgttttcataagctatattgg 21328  T
Q  162 agaaattatgaaaataagcaaaaacagtttatcaacaatgttagtatgttaaaagttgtttttacatgttcttccaaacaatagataagctcatgtaagt 261  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  |||||    
T  21327 agaaattatgaaaataaactaaaacagtttatcaacaatgttagtatgttaaaagctgtttttacatgttcttccaaacagtagataagctcagataagt 21228  T
Q  262 caatccaaacatacccttatccatttgaat-atatgctccttagcatcgacatttttgatagaaggc 327  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||| ||||| ||||||| ||||||    
T  21227 caatccaaacatacctttatccatttcaataatatgctccttagcaccgacacttttgatggaaggc 21161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 58798 - 58995
Alignment:
Q  2 tttttcttaaactgggttttaggccctggttggactaacgtcnnnnnnnnnagcttatagcacttatcatgatcagcacttatgtgtaagctatttttat 101  Q
    |||||||||||||||||||||||||||| |||||| ||||||         |||||||||||||||||||||||||||||||||||||||||||||||||    
T  58798 tttttcttaaactgggttttaggccctgtttggaccaacgtctttttttt-agcttatagcacttatcatgatcagcacttatgtgtaagctatttttat 58896  T
Q  102 aggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagcgtcttggagaaattatgaaaataagcaaaaacagtttatcaacaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58897 aggaaaagttaaaataaagttaaattgttttcgtataagctgttttcataagcgtcttggagaaattatgaaaataagcaaaaacagtttatcaacaat 58995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 58990 - 59091
Alignment:
Q  238 aacaatagataagctcatgtaagtcaatccaaacatacccttatccatttgaatatatgctccttagcatcgacatttttgatagaaggcttgatgatgt 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||    
T  58990 aacaatagataagctcatgtaagtcaatccaaacatacccttatccatttgaatatatgctccttagcatcgacacttttgatagaaggcgtgatggtgt 59089  T
Q  338 cc 339  Q
    ||    
T  59090 cc 59091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 15784253 - 15784380
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaa-gttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtc 157  Q
    ||||||||| ||||| ||| ||||||| |||||||||| || || |||| | ||||||||||||||||||||||||||||||||  ||| ||||||  ||    
T  15784253 agcacttattatgataagcgcttatgtataagctatttctaaagtaaaaaggtaaaataaagttaaattgttttcgtataagctggttttataagctatc 15784352  T
Q  158 ttggagaaattatgaaaataagcaaaaa 185  Q
    |||||||| || ||||||||||| ||||    
T  15784353 ttggagaacttgtgaaaataagctaaaa 15784380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 7028230 - 7028304
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    ||||||| ||| |||||| ||||| ||||| |||||||||||||| ||||||| ||||||||| |||||||||||    
T  7028230 cttatgtataaactatttctatagcaaaagataaaataaagttaagttgtttttgtataagctgttttcataagc 7028304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 37841916 - 37841998
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||||| || ||| |||| |||||||||  ||||  ||| | ||||||||||||||||||||||||||||||||    
T  37841916 agcacttatcatgataagtactcatgtataagctattcctataacaaatgataaaataaagttaaattgttttcgtataagct 37841998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 10744249 - 10744346
Alignment:
Q  83 atgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtcttggagaaattatgaaaataag 179  Q
    |||| ||||||||||| ||   ||||| |||||||||||| |||||||||| |||||||| ||||||||||| ||||| ||||| |||| ||||||||    
T  10744249 atgtataagctattttgatgaaaaaagataaaataaagttgaattgttttcctataagctgttttcataagctgtcttagagaacttataaaaataag 10744346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 836473 - 836409
Alignment:
Q  78 cacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||||||||||||||||  |||| |||||||||  ||||||||||| |||||||||    
T  836473 cacttatgtgtaagctatttttatagtgaaagataaaataaaactaaattgtttttgtataagct 836409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 9572254 - 9572178
Alignment:
Q  66 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||| || |||| | |||||||| ||||| ||||| |||||||||||||||||| ||| |||||||||    
T  9572254 tatcatgatcagcgctaatgtattagctatttctatagcaaaagataaaataaagttaaattgcttttgtataagct 9572178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 34952149 - 34952215
Alignment:
Q  76 agcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| ||||| |||||||||| || || | |||||||||||||||||||||||||||| |||||||    
T  34952149 agcacctatgtataagctatttctagagcagaagttaaaataaagttaaattgttttcgaataagct 34952215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 23544786 - 23544710
Alignment:
Q  66 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||| ||| ||||||| |||||||||| ||| | ||||| |||||| |||| ||||||||||| ||||||||    
T  23544786 tatcatgataagcgcttatgtataagctatttctatggaaaaagataaaattaagtcaaattgttttcatataagct 23544710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 47432042 - 47432086
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  47432042 taagctatttttatagaaaaagataaaataaagttaaattgtttt 47432086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 51190784 - 51190859
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    |||||||||| | ||||||| |  ||||||||| || || ||||| |||||||||||||||||||||| |||||||    
T  51190784 ttatcatgataaacacttatttaaaagctatttgtaaagcaaaagataaaataaagttaaattgtttttgtataag 51190859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 8852782 - 8852856
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||||||||| | |||| |||| ||||||||||||| |  ||||| ||||||||||||| ||||||||| ||||    
T  8852782 cttatcatgataaacactaatgtataagctatttttacaacaaaagataaaataaagttatattgttttcttata 8852856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 45145165 - 45145227
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctt 143  Q
    |||||| |||||||||||||||| ||||| ||||||||  |||||||||||| ||||| ||||    
T  45145165 ttatgtataagctatttttatagcaaaagataaaataatattaaattgtttttgtatatgctt 45145227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 49888705 - 49888767
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||| |||||||||| | | | ||||| |||||||||||| |||||||||||||||||||    
T  49888705 cttatgtataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagct 49888767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 15687196 - 15687143
Alignment:
Q  89 aagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||| ||||  ||||  ||||||||||||||||||||||||||||||||    
T  15687196 aagctatttctataacaaaatataaaataaagttaaattgttttcgtataagct 15687143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 41163151 - 41163074
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| |||| ||| ||||||| | || ||||||||| | ||||| |||||| ||||||||||| |||||||||||||    
T  41163151 ttatcctgataagcgcttatgtatgagttatttttattgcaaaagataaaatgaagttaaattgctttcgtataagct 41163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 9656566 - 9656650
Alignment:
Q  62 cacttatcatgatcagcacttatgtgtaagctattttt----ataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||| ||||| ||||| |||||||||| |    |||| ||||  ||||||||||||||||| ||||| ||||||||    
T  9656566 cacttatcatgataagcacctatgtataagctatttatttctatagcaaaaaataaaataaagttaaattattttcatataagct 9656650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 36070199 - 36070250
Alignment:
Q  91 gctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||  ||||| ||||||||||||||||||| |||| |||||||    
T  36070199 gctatttttataacaaaagataaaataaagttaaattgtcttcggataagct 36070250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 36151636 - 36151577
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    |||||| ||||||||||  |||  ||||| ||||||||||| ||||||||||||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataag 36151577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 45990179 - 45990128
Alignment:
Q  91 gctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||    
T  45990179 gctatttttatatcaaaagataaaataaagtaaaattgttttcatataagct 45990128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 7137152 - 7137090
Alignment:
Q  61 gcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagtta 123  Q
    ||||||||| |||| ||| ||||| | ||| |||||||||||  |||||||||||||||||||    
T  7137152 gcacttatcttgataagcgcttatatataaactatttttataacaaaagttaaaataaagtta 7137090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 30582072 - 30582022
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||| ||||||||||| ||||| |||||||||||||| ||||||| |||||    
T  30582072 taaggtatttttatagaaaaagataaaataaagttaacttgtttttgtata 30582022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 34619510 - 34619448
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||| ||||| |||| ||||  ||||| |||||||| ||||||||||||| |||||||||    
T  34619510 cttatgtataagccatttctataacaaaagataaaataaggttaaattgtttttgtataagct 34619448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 41184770 - 41184724
Alignment:
Q  92 ctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||||| ||||| |||||||| ||||||||||||| |||||    
T  41184770 ctatttttatagcaaaagataaaataatgttaaattgtttttgtata 41184724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 41505633 - 41505682
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||||||||| ||| || ||| |||||||||||||||||||||||    
T  41505633 taagctatttttatagaaaacgt-aaattaaagttaaattgttttcgtata 41505682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 1729719 - 1729670
Alignment:
Q  105 aaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    ||||| ||||||||| | | |||||||||||||||||| |||||||||||    
T  1729719 aaaagataaaataaactgatattgttttcgtataagctattttcataagc 1729670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 4256173 - 4256112
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||| |||||||||| || |  ||||| || |||||||||||||| ||||||||||||||    
T  4256173 ttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagct 4256112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 27140424 - 27140497
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    ||||||||||| ||||| ||||  ||||| ||||||||  ||||||||||||  |||||||| |||| ||||||    
T  27140424 ttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataagctgtttttataagc 27140497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 30581723 - 30581792
Alignment:
Q  63 acttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||| ||||||| |||| ||||   |||||||||||||||| ||| | | ||||||||||||||||||||    
T  30581723 acttttcatgataagcagttatacataagctatttttatagaaaacgatgaaataaagttaaattgtttt 30581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 46252827 - 46252750
Alignment:
Q  67 atcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttt 144  Q
    ||||||||  ||||| |||| || ||||||||||||  ||||| |||||||||||||||||  ||| | |||||||||    
T  46252827 atcatgatatgcactaatgtataggctatttttataacaaaagataaaataaagttaaatttcttttgcataagcttt 46252750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 47498943 - 47498906
Alignment:
Q  105 aaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  47498943 aaaagataaaataaagttaaattattttcgtataagct 47498906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 276
Target Start/End: Original strand, 601163 - 601195
Alignment:
Q  244 agataagctcatgtaagtcaatccaaacatacc 276  Q
    ||||||||||| |||||||||||||||||||||    
T  601163 agataagctcaagtaagtcaatccaaacatacc 601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 1233016 - 1232964
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    |||||| ||||||||  ||||  ||||||||||||||||| ||||||||||||    
T  1233016 taagctgtttttataacaaaacataaaataaagttaaattattttcgtataag 1232964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 142
Target Start/End: Original strand, 5243550 - 5243578
Alignment:
Q  114 aataaagttaaattgttttcgtataagct 142  Q
    |||||||||||||||||||||||||||||    
T  5243550 aataaagttaaattgttttcgtataagct 5243578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 14576779 - 14576727
Alignment:
Q  86 tgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||||||||||  |||| ||| | |||||||||||||||||||||| |||||    
T  14576779 tgtaagctatttccatagtaaaggataaaataaagttaaattgtttttgtata 14576727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 15477530 - 15477574
Alignment:
Q  94 atttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||| ||||| ||||| |||||||||||||||||||||| |||||    
T  15477530 atttctatagtaaaagataaaataaagttaaattgtttttgtata 15477574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 30043895 - 30043855
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattg 128  Q
    |||||||||| ||||||||||| |||||||| |||||||||    
T  30043895 taagctatttctataggaaaagataaaataatgttaaattg 30043855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 37842485 - 37842425
Alignment:
Q  82 tatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| |||||||||| ||||| ||||| | ||||||||||||| ||| |||| |||||||    
T  37842485 tatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagct 37842425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 46499978 - 46499934
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||| |||| |||||| ||||||||||| ||||||||||    
T  46499978 taagctatttctataagaaaagataaaataaagtcaaattgtttt 46499934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 41475210 - 41475133
Alignment:
Q  62 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 139  Q
    ||||| ||||||| ||||||||||| ||||||| |||||||| ||||| ||||||| |||||||||||||||||||||    
T  41475210 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgttttcgtataa 41475133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 37444567 - 37444483
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttt 144  Q
    ||||||||||||||| ||| ||||||| |||||||||  ||||  ||||| |||| |||||||||||||||||||||||||||||    
T  37444567 agcacttatcatgataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcgtataagcttt 37444483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 16211038 - 16210956
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||||||||  ||||| |||| |||||||||| ||||| ||| | ||||||||||||| ||||||||| ||||||||    
T  16211038 agcacttatcatgatacgcactcatgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagct 16210956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 3537177 - 3537101
Alignment:
Q  66 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||| |||| ||||||| ||| ||||| |||| ||||| ||||| ||||||||||| ||||||||||||||||||||    
T  3537177 tatcgtgataagcacttttgtataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagct 3537101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 7646145 - 7646203
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 139  Q
    |||||| |||||||||| |||| |||||| |||||||||||||||||||||| ||||||    
T  7646145 ttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttgtataa 7646203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 154
Target Start/End: Original strand, 26215418 - 26215508
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    ||||| ||||| ||| ||||||| |||||||||| ||||  ||||| ||||||||||||||| | |||||||||||  | |||||||||||    
T  26215418 cttataatgataagcgcttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataatatgttttcataagc 26215508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 14280542 - 14280471
Alignment:
Q  71 tgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||| ||| ||||||| ||| |||||| ||||| ||||| |||||| || ||||||||||||| ||||||||    
T  14280542 tgataagcgcttatgtataacctatttctatagcaaaagataaaattaaattaaattgttttcatataagct 14280471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 42237539 - 42237492
Alignment:
Q  95 tttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||  ||||| ||||||||||||||||||||||| ||||||||    
T  42237539 tttttataacaaaagataaaataaagttaaattgttttcatataagct 42237492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 3936771 - 3936849
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||||  |||||||||| ||| |||||| ||||  ||| | |||||||||| |||||||| ||| ||||||||    
T  3936771 cttatcatgataggcacttatgtataatctatttctataacaaaggataaaataaagctaaattgtcttcctataagct 3936849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 12497355 - 12497305
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||| |||||||||| ||||| |||||||||||||| ||||||| |||||    
T  12497355 taagccatttttatagcaaaagataaaataaagttaacttgtttttgtata 12497305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 35374493 - 35374443
Alignment:
Q  92 ctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||| |||||  |||| ||||||||||||||||||||||| ||||||||    
T  35374493 ctatttctatagcgaaagataaaataaagttaaattgttttcatataagct 35374443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 42597338 - 42597392
Alignment:
Q  79 acttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttc 133  Q
    |||||||| |||||||||| ||||  ||||| ||||||||||| |||||||||||    
T  42597338 acttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttc 42597392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 2364604 - 2364543
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||| || ||||||||||||| ||||| ||||||||||| |||||  ||| |||||||||    
T  2364604 ttatgtatacgctatttttatagcaaaagataaaataaagtcaaatttcttttgtataagct 2364543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 4558737 - 4558794
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||| |||||||||| ||||  ||||| ||||||||||||||||| ||||| ||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattattttcatata 4558794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 35534734 - 35534686
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtat 137  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  35534734 taagatatttttatag-aaaagataaaataaagttaaattgtttttgtat 35534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 35534985 - 35534928
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctttt 145  Q
    |||||||||| ||||  ||||||||||||||||| ||| |||||| |||||| |||||    
T  35534985 taagctatttctataataaaagttaaaataaagtcaaactgtttttgtataaactttt 35534928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 27049367 - 27049411
Alignment:
Q  135 tataagcttttttcataagcgtcttggagaaattatgaaaataag 179  Q
    ||||| ||||||||||||||   ||||||||||||||||||||||    
T  27049367 tataaacttttttcataagctatttggagaaattatgaaaataag 27049411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 29205752 - 29205804
Alignment:
Q  86 tgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||| |||||| ||||| ||||| |||||| ||||||||||||||| |||||    
T  29205752 tgtaaactatttctatagaaaaagataaaatgaagttaaattgtttttgtata 29205804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 34638115 - 34637998
Alignment:
Q  62 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaat-aaagttaaattgttttcgtataagcttttttcataagc-gtctt 159  Q
    ||||||||||||| | | ||||| | |||||||||| ||||| ||||| |||||| |||||||||||||||||||||||||| |||||| ||||   |||    
T  34638115 cacttatcatgataaccgcttatatataagctatttctatagaaaaagataaaattaaagttaaattgttttcgtataagctgttttcaaaagctacctt 34638016  T
Q  160 ggagaaattatgaaaata 177  Q
    |||||| |||||||||||    
T  34638015 ggagaatttatgaaaata 34637998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 25447392 - 25447314
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||  ||||||| ||||||| |||||| ||||| ||||| ||||||||| |||||||||||| |||||||||    
T  25447392 cttatcatgagaagcacttttgtgtaaactatttctatagtaaaagataaaataaacttaaattgtttttgtataagct 25447314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 2128382 - 2128309
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    |||||| |||||||||| ||||  ||||| ||||||||||||||||||||||  | |||||| |||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagttaaattgttttactgtaagctgttttcataagc 2128309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 20669097 - 20669218
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtct 158  Q
    |||| |||||||||| ||||||||||| |||||||||| ||||  || |  || |||||||| ||| |||| || |||||||| |||||||||||  |||    
T  20669097 agcatttatcatgataagcacttatgtataagctatttctataacaagatatacaataaagtcaaaatgttgtcatataagctgttttcataagctatct 20669196  T
Q  159 tggagaaattatgaaaataagc 180  Q
    ||||||  ||||| ||||||||    
T  20669197 tggagagcttatgtaaataagc 20669218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 49465813 - 49465738
Alignment:
Q  62 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||||||||||  | | |||||||||||||||||||||||  ||||| |||||||||||| |||| ||||||||||    
T  49465813 cacttatcatgagaaacgcttatgtgtaagctatttttataacaaaagataaaataaagtt-aatttttttcgtata 49465738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 42809242 - 42809309
Alignment:
Q  83 atgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcat 150  Q
    |||| |||||||||| ||||  ||||| ||||||| ||||||||||||||| |||||||| |||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgttttcatataagctgttttcat 42809309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 30956750 - 30956700
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||| |||||    
T  30956750 taagctatttctatagcaaaagataaaataaagttaaattgtttttgtata 30956700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 30972562 - 30972512
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||| |||||    
T  30972562 taagctatttctatagcaaaagataaaataaagttaaattgtttttgtata 30972512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 42808925 - 42808991
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    |||||| ||| ||||  ||||| ||||||||||||||||||||||  |||||||| |||||||||||    
T  42808925 taagctgtttctataacaaaagataaaataaagttaaattgtttttatataagctgttttcataagc 42808991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 44061159 - 44061093
Alignment:
Q  76 agcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||| ||| |||||||||| ||||| ||||| |||||||| |||||||||||||  ||||||||    
T  44061159 agcacttctgtataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagct 44061093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 402689 - 402614
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    ||||||||||| ||  ||||||| |||||||||| ||||| ||||| | || |||| ||||||||||||||||||||    
T  402689 cttatcatgataagggcttatgtataagctatttctatagaaaaagat-aattaaatttaaattgttttcgtataag 402614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 31403280 - 31403356
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    |||||||| || ||||||||| | ||||||||||  |||  ||||| |||||| |||||||| ||||||||||||||    
T  31403280 cttatcatcataagcacttatatataagctatttccatatcaaaagataaaatgaagttaaaatgttttcgtataag 31403356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 52597607 - 52597686
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    ||||||||||||||| ||||||||||| ||||||||||  |||| ||||| |||| | |||| | ||||||||| ||||||    
T  52597607 agcacttatcatgat-agcacttatgtataagctatttccatagtaaaagataaagtgaagtaacattgttttcatataag 52597686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 15304471 - 15304420
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 139  Q
    |||||||||| ||||  ||||| ||||||||||||||||||||||| |||||    
T  15304471 taagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 24684947 - 24684897
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||||||||| ||||| ||||||||| || ||||||||| |||||    
T  24684947 taagctatttttatagaaaaagataaaataaattttaattgtttttgtata 24684897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 33405287 - 33405237
Alignment:
Q  92 ctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||| ||||| ||||| |||||||||||||| |||||||| ||||||||    
T  33405287 ctatttctatagcaaaaggtaaaataaagttaatttgttttcatataagct 33405237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 37689508 - 37689454
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||||||||  ||||| |||| |||||||||||| ||||| ||||||||    
T  37689508 taagctatttttataacaaaagataaagtaaagttaaattattttcatataagct 37689454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 30574064 - 30574002
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaa 124  Q
    |||| |||||||||| ||| ||||||| |||||||||| ||||  ||||| ||||||||||||||    
T  30574064 agcatttatcatgataagcgcttatgtataagctatttctata--aaaagataaaataaagttaa 30574002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 46030911 - 46030980
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagtt-aaattgttttc 133  Q
    |||||||||| | ||||||| | ||||||||||  |||| ||||| |||||||||||| |||||||||||    
T  46030911 ttatcatgataaacacttatatataagctatttcgatagaaaaagataaaataaagttaaaattgttttc 46030980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 1395611 - 1395671
Alignment:
Q  82 tatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| |||||||||| ||||  ||||| ||||||||||| ||||| ||||| ||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagct 1395671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 10101600 - 10101548
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    |||| ||||| ||||  ||||| ||||||||||||||||||||||| ||||||    
T  10101600 taagttatttctataacaaaagataaaataaagttaaattgttttcatataag 10101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 10212525 - 10212473
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    |||| ||||| ||||  ||||| ||||||||||||||||||||||| ||||||    
T  10212525 taagttatttctataacaaaagataaaataaagttaaattgttttcatataag 10212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 34235224 - 34235164
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaa 124  Q
    ||||||||||| |||||||||||  |||||||||  |||| ||||  ||||||||||||||    
T  34235224 cttatcatgataagcacttatgtagaagctatttccatagcaaaatataaaataaagttaa 34235164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 35328311 - 35328236
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    ||||| ||||| |||||||||||  || |||||  ||||| ||| | |||| |||||||||||||||||||||||||    
T  35328311 cttattatgataagcacttatgtacaacctattactatagcaaaggataaa-taaagttaaattgttttcgtataag 35328236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 39921772 - 39921744
Alignment:
Q  111 taaaataaagttaaattgttttcgtataa 139  Q
    |||||||||||||||||||||||||||||    
T  39921772 taaaataaagttaaattgttttcgtataa 39921744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 46778351 - 46778307
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||| ||||| || || ||||||||||||||||||||||    
T  46778351 taagctatttctatagcaagagataaaataaagttaaattgtttt 46778307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 9093705 - 9093626
Alignment:
Q  63 acttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||||| ||| ||||||  |||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||    
T  9093705 acttatcatgataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagct 9093626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 178
Target Start/End: Original strand, 264293 - 264407
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagcgtcttggag 163  Q
    ||||||||||| ||  ||||| | |||||||||| || || ||||| |||||||||||||||| |||||||| |||||| ||||||||    ||||||||    
T  264293 cttatcatgataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttcgtctaagctattttcatagctatcttggag 264392  T
Q  164 aaattatgaaaataa 178  Q
    || ||||||||||||    
T  264393 aacttatgaaaataa 264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 29274361 - 29274299
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||| |||||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||||    
T  29274361 cttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagct 29274299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 32206168 - 32206090
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||| |||||||||||||||||||| | |||   ||||| | ||||||||||||||| |||| |||||||||    
T  32206168 cttatcatgataagcacttatgtgtaagctatctctatgacaaaagatgaaataaagttaaattattttagtataagct 32206090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 33736757 - 33736833
Alignment:
Q  61 gcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtat 137  Q
    |||||||||||||||||||||||||| |||| ||||| ||||  | ||  ||||||||||||||||||  |||||||    
T  33736757 gcacttatcatgatcagcacttatgtataagttatttctataacataacataaaataaagttaaattgccttcgtat 33736833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 9559688 - 9559617
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgta 136  Q
    |||||| ||| ||| ||||||| |||| ||||| ||||| ||||| ||||||||| ||||||||||||||||    
T  9559688 ttatcaagataagcgcttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttcgta 9559617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 20671996 - 20671933
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttt 144  Q
    |||||| |||||||||| || |  ||||| ||||||||||| ||||||||||||||||||||||    
T  20671996 ttatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagcttt 20671933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 4163094 - 4163164
Alignment:
Q  61 gcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttt 131  Q
    |||||||||||||| | ||||||    |||||||||||||||| || || |||||||||||||||||||||    
T  4163094 gcacttatcatgataaacacttacacataagctatttttatagaaatagataaaataaagttaaattgttt 4163164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 4224715 - 4224785
Alignment:
Q  61 gcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttt 131  Q
    |||||||||||||| | ||||||    |||||||||||||||| || || |||||||||||||||||||||    
T  4224715 gcacttatcatgataaacacttacacataagctatttttatagaaatagataaaataaagttaaattgttt 4224785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 8147648 - 8147698
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||| |||||    
T  8147648 taagctatttttatagcaaaagataaaataaagttgaattgtttttgtata 8147698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 21539146 - 21539196
Alignment:
Q  104 gaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    |||||| |||||||||||| |||||||||| |||||||| |||||||||||    
T  21539146 gaaaagctaaaataaagttcaattgttttcatataagctcttttcataagc 21539196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 34584295 - 34584369
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    ||||||||||| |||||||||||  ||||||||||||| |    || |||||||||||||||| |||||||||||    
T  34584295 cttatgtgtaatctatttttatattaaaagttaaaatatacactaactgttttcgtataagctgttttcataagc 34584369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 3785822 - 3785770
Alignment:
Q  90 agctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||  ||| ||||| ||||||||||||||| ||||||||||||||||    
T  3785822 agctattttgctagcaaaagataaaataaagttaaactgttttcgtataagct 3785770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 33117464 - 33117532
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||| || ||||||||||  ||||||| |||||||| ||||  |||||| |||||||||||||||    
T  33117464 cttatcataataagcacttatgcataagctacttttatagcaaaatataaaattaagttaaattgtttt 33117532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 28621227 - 28621180
Alignment:
Q  95 tttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||  ||||| |||||||||||||||||||||| |||||||||    
T  28621227 tttttataacaaaagataaaataaagttaaattgtttttgtataagct 28621180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 35070754 - 35070695
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctttttt 147  Q
    |||||||||||||||| ||||| ||||||||| | ||||||||||  |||||||| ||||    
T  35070754 taagctatttttatagaaaaagataaaataaaataaaattgttttattataagctatttt 35070695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 24626241 - 24626291
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||| ||||||||| | ||||| |||||||||||||||| |||||    
T  24626241 taagctatttctataggaaaggataaaacaaagttaaattgtttttgtata 24626291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 24836330 - 24836272
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 139  Q
    |||||| |||| ||||| ||||  ||||| ||||||||||| |||||||||||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataa 24836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 31624007 - 31624085
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctt 143  Q
    ||||||||||  |||||||||||||||||||| | |||  ||| | ||| |||||||||||| ||||| ||||| ||||    
T  31624007 ttatcatgatacgcacttatgtgtaagctattctgataacaaaggataatataaagttaaatcgtttttgtataggctt 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 2455204 - 2455305
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt-cgtataagcttttttcataagc-gtcttggagaaattatgaaaataa 178  Q
    |||||| |||||||||| |||||  | || |||||||||| |||  |||||| |||||||||| |||||||| ||  |||||||||| || |||||||||    
T  2455204 ttatgtataagctatttctatagctatagataaaataaagctaagctgtttttcgtataagctgttttcatatgcaatcttggagaagttgtgaaaataa 2455303  T
Q  179 gc 180  Q
    ||    
T  2455304 gc 2455305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 3217322 - 3217257
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctttt 145  Q
    ||||||| |||||||||||| || || ||| ||||||||||| ||||| ||||| |||||| ||||    
T  3217322 cttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataagatttt 3217257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 11363492 - 11363447
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttc 133  Q
    ||||||||||||| | |||||| ||||||||||||||||| |||||    
T  11363492 taagctatttttaaaagaaaagataaaataaagttaaattattttc 11363447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 30536682 - 30536638
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||||||||| ||||| ||| |||| |||||||||||||    
T  30536682 taagctatttttatagcaaaagataagataacgttaaattgtttt 30536638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 34405051 - 34405095
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||| ||||  ||||||||||||||||| ||||||||||    
T  34405051 taagctatttctataataaaagttaaaataaagtcaaattgtttt 34405095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 12425494 - 12425571
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||| | | ||||||| ||| |||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  12425494 ttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagct 12425571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 465880 - 465966
Alignment:
Q  68 tcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    ||||||| ||||||||| | |||||||||| |||   ||||| |||||||||||||||||||||| ||||||||| ||| |||||||    
T  465880 tcatgataagcacttatatataagctatttctatgacaaaagataaaataaagttaaattgtttttgtataagctgtttacataagc 465966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 11615454 - 11615519
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataag 153  Q
    |||||||||||||||  ||||| ||||||||||| ||||||||| |||||||||| ||||||||||    
T  11615454 taagctatttttataacaaaagataaaataaagtcaaattgtttacgtataagctgttttcataag 11615519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 39105386 - 39105533
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag-------cttttttcataagc-g 155  Q
    ||||||||||| ||| ||||||| |||||||||| |||||  |||  | |||| |||||||||||||||||||||||       || |||||||||||      
T  39105386 cttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagcta 39105485  T
Q  156 tcttggagaaattatgaaaataagc-aaaaacagtttatcaacaatgt 202  Q
    |||||||||| |||||||||||||| ||||| || |||| ||||||||    
T  39105486 tcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgt 39105533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 7674571 - 7674647
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagc 141  Q
    |||||||||| ||||||||| | |||||||||| ||||  ||||| ||||||||| ||||||||||||| |||||||    
T  7674571 ttatcatgataagcacttatatataagctatttctataccaaaagataaaataaatttaaattgttttcttataagc 7674647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 42569128 - 42569050
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||| ||| ||||||   ||||||||| ||||| ||||| |||||||||||  |||||||||||||||||||    
T  42569128 cttatcatgataagcgcttatgaaaaagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagct 42569050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 9202895 - 9202819
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagc 141  Q
    |||||||||| ||  ||||| | |||||||||| | ||| ||||| ||||||||||||||||||||||| |||||||    
T  9202895 ttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagc 9202819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 4014569 - 4014448
Alignment:
Q  67 atcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcg-------tataagcttttttcataagc-gtct 158  Q
    |||||||| ||| | ||||| |||||||||| ||||| ||||| ||||||||||||| |||||||| |        ||||||| |||||||||||  |||    
T  4014569 atcatgataagcgcctatgtataagctatttctatagcaaaagataaaataaagttagattgtttttggaaaaatgataagctgttttcataagctatct 4014470  T
Q  159 tggagaaattatgaaaataagc 180  Q
    ||||||| ||||||||||||||    
T  4014469 tggagaacttatgaaaataagc 4014448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 14932231 - 14932289
Alignment:
Q  83 atgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||| ||| |||||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  14932231 atgtataatctatttttatagcaaaagataaaataaagttaaattgtttt-gtataagct 14932289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 28776893 - 28776955
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagtt 122  Q
    ||||||||||||||| ||  ||||||| |||||||||||||| | ||||| ||||||||||||    
T  28776893 agcacttatcatgataagtgcttatgtataagctatttttattgaaaaagataaaataaagtt 28776955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 35446001 - 35446051
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||||||||| ||| | |||||||||||||||||||||| |||||    
T  35446001 taagctatttttatagcaaatgataaaataaagttaaattgtttttgtata 35446051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 3566468 - 3566388
Alignment:
Q  62 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||| ||||||||  | |||||||||| ||||   ||||  |||||||||||||||| |||| |||||||||    
T  3566468 cacttatcatgataagcacttacctataagctatttctatacccaaagagaaaataaagttaaattatttttgtataagct 3566388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 42500349 - 42500305
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||    
T  42500349 taagctatttttatatcaaaagataaaataaagttaaattgtttt 42500305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 11835199 - 11835270
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgt 135  Q
    ||||||||||| ||   |||||| ||| | |||||||||  ||||| |||||||||||||||||||||||||    
T  11835199 cttatcatgataagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaattgttttcgt 11835270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 37112390 - 37112331
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 139  Q
    ||||||| |||||||||| || || ||||| ||||| |||||||||||||||| ||||||    
T  37112390 cttatgtataagctatttctacagcaaaagataaaacaaagttaaattgtttttgtataa 37112331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 3932809 - 3932759
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||||||||| ||||| |||||| ||||| ||||||||| |||||    
T  3932809 taagctatttttatagcaaaagataaaatgaagtttaattgtttttgtata 3932759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 6096465 - 6096503
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttata 102  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  6096465 cttatcatgataagcacttatgtataagctatttttata 6096503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 7984969 - 7985015
Alignment:
Q  135 tataagcttttttcataagcg-tcttggagaaattatgaaaataagc 180  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||    
T  7984969 tataagcttttttcataagctatcttggagaatttatgaaaataagc 7985015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 4855635 - 4855696
Alignment:
Q  79 acttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    |||||||| | |||||||||||||  ||||  |||||||||||||||||||| || ||||||    
T  4855635 acttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataag 4855696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 10363696 - 10363741
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttc 133  Q
    |||||||||| ||||  ||||| |||||||||||||||||||||||    
T  10363696 taagctatttctataacaaaagataaaataaagttaaattgttttc 10363741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 11054124 - 11054196
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataag 153  Q
    ||||||| |||||||||| ||||  ||||| |||||||||| ||| | ||||||||||||| | ||||||||||    
T  11054124 cttatgtataagctatttctataataaaagataaaataaag-taattagttttcgtataagatgttttcataag 11054196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Original strand, 42646792 - 42646829
Alignment:
Q  243 tagataagctcatgtaagtcaatccaaacataccctta 280  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  42646792 tagataagctcaagtaagtcaatccaaacagaccctta 42646829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 5963434 - 5963362
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||| |||||||||| ||| |||||||  || |||||| ||||   |||| ||||||||||||||||||||||    
T  5963434 agcatttatcatgataagcgcttatgtacaaactatttctataatgaaagataaaataaagttaaattgtttt 5963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 9107058 - 9107102
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    ||||||||||||| || ||||| ||||||||||||||||| ||||    
T  9107058 taagctatttttaaagaaaaagataaaataaagttaaattatttt 9107102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 19460534 - 19460466
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    ||||||||||| ||||||||||| ||| |||||| ||||  ||||  |  |||||||||||||||||||    
T  19460534 cttatcatgataagcacttatgtataaactatttctatatcaaaacattgaataaagttaaattgtttt 19460466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 39594754 - 39594805
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    |||||||||| ||||| ||||| |||||||||| ||||||||||||| |||||    
T  39594754 taagctatttctatagaaaaagataaaataaag-taaattgttttcgcataag 39594805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 41819532 - 41819612
Alignment:
Q  62 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||| |||  || ||| |||||||||| ||||    ||| ||||||||| |||||||||||| |||||||||    
T  41819532 cacttatcatgatgagcggttttgtataagctatttctataatggaagataaaataaatttaaattgtttttgtataagct 41819612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 3155525 - 3155603
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||| ||||  ||||| |||||||||| ||||| ||||| |||||||||||||||||||||| ||| |||||    
T  3155525 cttatcatgataagcatgtatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagct 3155603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 1706542 - 1706622
Alignment:
Q  62 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| ||||||| ||  |||||||  ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||||    
T  1706542 cacttttcatgataagtgcttatgtagaagctatttttatagaaaaagttaaaataatgttcaattgttttcgtagaagct 1706622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 51630033 - 51630111
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| ||||| ||||||| |||  ||||||||| ||||| ||||| ||||||||||||||||||||||  ||||||||    
T  51630033 cttattatgataagcacttgtgttcaagctatttatatagcaaaagataaaataaagttaaattgttttgatataagct 51630111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 17884009 - 17884066
Alignment:
Q  83 atgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    ||||||||||||||| ||||  ||||| |||||||||||||||||||||| |||||||    
T  17884009 atgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataag 17884066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 26520376 - 26520299
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||| ||||||||||| ||| || ||| ||||  ||||| | ||||||||||||||||||||||| ||||||    
T  26520376 ttatcatgataagcacttatgtataaactgtttctataacaaaagatgaaataaagttaaattgttttcgtgtaagct 26520299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 25885795 - 25885859
Alignment:
Q  78 cacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||| | |||| ||| ||||| ||||| ||||||||||||||||||||||||| ||||||    
T  25885795 cacttatgtattagctctttctatagcaaaagataaaataaagttaaattgttttcgtgtaagct 25885859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 47800593 - 47800669
Alignment:
Q  105 aaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtcttggagaaattatgaaaataagc 180  Q
    ||||| ||||||||||||||| |||||| ||||||||| |||||||||||  ||||| |||  ||||||||||||||    
T  47800593 aaaagataaaataaagttaaaatgtttttgtataagctgttttcataagctatcttgaagagcttatgaaaataagc 47800669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 437565 - 437504
Alignment:
Q  80 cttatgtgtaagctattttt-ataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    ||||||| |||||||||||| |||| ||||| ||||||||||||||||||| ||| ||||||    
T  437565 cttatgtataagctattttttatagcaaaagataaaataaagttaaattgtgttcatataag 437504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 50662880 - 50662815
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgt 129  Q
    ||||||||||| |||  |||||| |||||||||||||||| | ||| |||||||| ||||||||||    
T  50662880 cttatcatgatgagcgtttatgtataagctatttttatagcataagataaaataatgttaaattgt 50662815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 50681212 - 50681163
Alignment:
Q  89 aagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||| |||||    
T  50681212 aagctatttttataggataagataaaataatgttaaattgtttttgtata 50681163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 43505902 - 43505946
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||    
T  43505902 taagctatttttatagcaaaagataaaataacgttaaattgtttt 43505946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 6364071 - 6364134
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaatt 127  Q
    ||||||| ||| ||||||||||| |||||||||| ||||  ||||| ||||||||||| |||||    
T  6364071 cttatcaagataagcacttatgtataagctatttctataacaaaagataaaataaagtgaaatt 6364134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 142
Target Start/End: Complemental strand, 27043931 - 27043900
Alignment:
Q  111 taaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||||||||||||||||||||||    
T  27043931 taaaataaagttaaattgttttcgtataagct 27043900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 49004118 - 49004042
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| ||||| ||| ||||||| ||||| |||| ||||| ||||| |||||||  |||||||||||||||||| ||||    
T  49004118 cttataatgataagcgcttatgtataagcaatttctatagcaaaagataaaata--gttaaattgttttcgtattagct 49004042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 7601697 - 7601755
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||||| |||||||||  ||||| ||| | |||||||||||||||||||||| |||||    
T  7601697 cttatgtataagctattcctatagcaaaggataaaataaagttaaattgtttttgtata 7601755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 17204084 - 17204134
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||| ||||||||| ||| ||||||||||||||| |||||||| |||||    
T  17204084 taagctgtttttatagcaaatgttaaaataaagttatattgtttttgtata 17204134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 22539154 - 22539116
Alignment:
Q  112 aaaataaagttaaattgttttcgtataagcttttttcat 150  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  22539154 aaaataaagttaaattgttttagtataagctattttcat 22539116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 22684640 - 22684574
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    |||||||||| ||||  ||| | ||||||||||| ||||||||||| |||||||| || ||||||||    
T  22684640 taagctatttctataacaaacggtaaaataaagtcaaattgttttcatataagctgttctcataagc 22684574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 23459578 - 23459628
Alignment:
Q  92 ctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||||| ||||| |||||| ||||||| |||||||| ||||||||    
T  23459578 ctatttttatagcaaaagataaaatgaagttaagttgttttcttataagct 23459628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 41336707 - 41336756
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||||||||| ||| | |||||||||||||||||||||| |||||    
T  41336707 taagctatttttatagcaaa-gataaaataaagttaaattgtttttgtata 41336756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 44138497 - 44138555
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||||| |||||| ||| ||||| | ||| |||||||||||||||||| |||||||||    
T  44138497 cttatgtataagctgtttctatagcagaagataaaataaagttaaattgctttcgtata 44138555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 2733238 - 2733303
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaa 125  Q
    ||||||| |||||||  |||||||||| ||||| ||||||||   ||||| |||||||||||||||    
T  2733238 agcacttgtcatgatatgcacttatgtataagcaatttttatgaaaaaagataaaataaagttaaa 2733303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 25332725 - 25332774
Alignment:
Q  93 tatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| ||||| ||||||| |||| ||||||||||||||| |||||||||    
T  25332725 tatttctatagtaaaagttgaaatgaagttaaattgtttttgtataagct 25332774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 25904334 - 25904285
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtat 137  Q
    ||||||||||||| || ||||| |||||||||||||||||| ||| ||||    
T  25904334 taagctatttttacagcaaaagataaaataaagttaaattgattttgtat 25904285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 44249208 - 44249285
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagc 141  Q
    ||||||||||| |||| |||||| |||| |||||  |||  ||||| ||||| ||||||||||| ||| |||||||||    
T  44249208 cttatcatgataagcaattatgtataagttatttcaataacaaaagataaaacaaagttaaattatttccgtataagc 44249285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 52326240 - 52326179
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||| ||||||||||| ||   ||||| |||||||||||||||||||| | |||||||||    
T  52326240 ttatgtataagctattttaatgataaaagataaaataaagttaaattgttgttgtataagct 52326179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 2987112 - 2987196
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttca 149  Q
    |||||||||| ||||||||| | |||||||||| || |  ||||  ||||||||||||||  |||||  ||||||||| ||||||    
T  2987112 ttatcatgataagcacttatttataagctatttctacaacaaaaaataaaataaagttaagatgtttatgtataagctattttca 2987196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 13216323 - 13216283
Alignment:
Q  93 tatttttataggaaaagttaaaataaagttaaattgttttc 133  Q
    ||||||||||| ||||| |||||||||||||||| ||||||    
T  13216323 tatttttatagcaaaagataaaataaagttaaatcgttttc 13216283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 20907112 - 20907164
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttc 133  Q
    |||||| |||||||||| |||| |||||| ||||||||||| ||| |||||||    
T  20907112 ttatgtataagctatttgtataagaaaagataaaataaagtgaaactgttttc 20907164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 21193937 - 21193977
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagt 121  Q
    |||||| |||||||||||||||| ||||| |||||||||||    
T  21193937 ttatgtataagctatttttatagtaaaagataaaataaagt 21193977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 41701563 - 41701499
Alignment:
Q  90 agctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc 154  Q
    |||||||| ||||  ||||| ||||||||||| |||| |||||| |||||||| |||| ||||||    
T  41701563 agctatttatataacaaaagataaaataaagtcaaatcgttttcatataagctgttttaataagc 41701499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 44863114 - 44863042
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    ||||||| ||||||| ||  ||||||  |||||||||||||||| ||||| ||| ||||  ||||||||||||    
T  44863114 agcacttgtcatgataagtgcttatgcataagctatttttatagaaaaaggtaagataacattaaattgtttt 44863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 42420442 - 42420368
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||||||||| ||| |||| || |||||||||||||||| ||||| |||||||| ||||||||||||| |||||    
T  42420442 cttatcatgataagcgcttacgtataagctatttttatagcaaaagataaaataacgttaaattgtttttgtata 42420368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 42457872 - 42457948
Alignment:
Q  66 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||| |||| |||||| ||| |||||| ||||| ||||| |||||||||||||||||||||| || ||||||    
T  42457872 tatcatgataagcatttatgtataatctatttctatagtaaaagataaaataaagttaaattgtttttgtttaagct 42457948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 3611164 - 3611295
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtata------ag-cttttttcataagc-gtcttggagaaattatg 171  Q
    ||||||| |||| ||||| ||||| ||||| |||||||||||||||||||||| |||||      || || |||||| ||||  |||||||||| |||||    
T  3611164 cttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttttgtatagtttatagactgttttcacaagctatcttggagaacttatg 3611263  T
Q  172 aaaataagc-aaaaacagtttatcaacaatgt 202  Q
    ||||||||| ||||||||||||| || |||||    
T  3611264 aaaataagctaaaaacagtttatgaataatgt 3611295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 4026739 - 4026807
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    ||||||||||| ||  ||||| | |||||||||||||||| ||||| ||||||||||||||||| ||||    
T  4026739 cttatcatgataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttt 4026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 39567825 - 39567892
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttt 131  Q
    ||||||||||| ||||||| ||| |||| ||||| ||||  ||||| |||||||||||||||||||||    
T  39567825 cttatcatgataagcacttgtgtataagatatttctataacaaaagataaaataaagttaaattgttt 39567892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 18962170 - 18962108
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||| | |||||||||||||  ||||| ||||||||||||||| ||||||| ||||||||    
T  18962170 cttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagct 18962108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 25609734 - 25609796
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||| |||||||||| |||| |||||| ||||||||||| || || ||||||||||||||    
T  25609734 cttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagct 25609796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 28902015 - 28902077
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||| |||||||||||||||  | ||||||||||||| ||||| ||||||| ||||||||    
T  28902015 cttatgtataagctatttttataacataagttaaaataaaattaaactgttttcatataagct 28902077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 35459856 - 35459910
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||| ||||  ||||| ||||||||||| ||||||||||||||||||||    
T  35459856 taagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataagct 35459910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 41241256 - 41241206
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| |||||    
T  41241256 taagctatttctataggaaaagataaaatgaagttaaattgtttttgtata 41241206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 42868585 - 42868535
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||| |||||    
T  42868585 taagctattttcatagaaaaagataaaataaagttaaattgtttttgtata 42868535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 40672791 - 40672750
Alignment:
Q  231 tcttccaaacaatagataagctcatgtaagtcaatccaaaca 272  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  40672791 tcttccaaacaatagataagctcaattaagtcaatccaaaca 40672750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 10619337 - 10619293
Alignment:
Q  90 agctatttttataggaaaagttaaaataaagttaaattgttttcg 134  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  10619337 agctatttttatagaaaaagataaaacaaagttaaattgttttcg 10619293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 16451088 - 16451164
Alignment:
Q  105 aaaagttaaaataaagttaaattgttttcgtataagcttttttcataagc-gtcttggagaaattatgaaaataagc 180  Q
    ||||| |||||| |||||||||||||||| |||||||| ||||| |||||  |||||||||| |  |||||||||||    
T  16451088 aaaagataaaatgaagttaaattgttttcatataagctgttttcgtaagctatcttggagaactcgtgaaaataagc 16451164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 23747227 - 23747299
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtat 137  Q
    |||| ||||| | ||||||||| |||||||||||||||  ||||| |||||| || ||||||| |||||||||    
T  23747227 ttatgatgataaacacttatgtataagctatttttatatcaaaagataaaatgaatttaaattattttcgtat 23747299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 26143792 - 26143717
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgta 136  Q
    |||||||| |||||| ||||||| ||| |||||||||| ||||| ||||| |||||||||||| |||| | ||||||    
T  26143792 agcacttaccatgat-agcacttgtgtataagctatttctatagcaaaagataaaataaagttcaattatattcgta 26143717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 44600459 - 44600546
Alignment:
Q  62 cacttatcatgatcagcacttatgtgtaagctatttttatagg--aaaagttaaaataaagttaaattgttttcgtataagctttttt 147  Q
    |||||||| |||| ||  ||||||| |||||||||| |||||   ||||| |||||||||||||||| |||||| |||||||| ||||    
T  44600459 cacttatcgtgataagtgcttatgtataagctatttctatagccaaaaagataaaataaagttaaatagttttcatataagctgtttt 44600546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 9395052 - 9395127
Alignment:
Q  64 cttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 139  Q
    ||||||||||| | |||| |||| |||| | ||| ||||| ||||| |||||||||| |||||||||||| |||||    
T  9395052 cttatcatgataaacactcatgtataagatttttctatagaaaaagataaaataaagctaaattgttttcatataa 9395127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 13220378 - 13220438
Alignment:
Q  66 tatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtt 130  Q
    ||||||||| |||||||||    ||||||||| ||||| ||||||||||||||||||| ||||||    
T  13220378 tatcatgataagcacttat----aagctatttctatagaaaaagttaaaataaagttagattgtt 13220438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 34339841 - 34339904
Alignment:
Q  77 gcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    ||||||||||||||| | |||||| |  ||||| ||||||||||| ||||| ||||||||||||    
T  34339841 gcacttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataag 34339904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 12464597 - 12464547
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||||||||| | ||| ||||| |||||||||||||||||||||| |||||    
T  12464597 taagctatttctgtagaaaaagataaaataaagttaaattgtttttgtata 12464547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 13325516 - 13325566
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||||| |||||||| ||| | ||||||||||||||||| ||||||||||    
T  13325516 taagctagttttatagaaaatgataaaataaagttaaattattttcgtata 13325566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 36114342 - 36114419
Alignment:
Q  65 ttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||||||| ||  ||||| | | ||||||||||||   ||||| |||||||||||||||||||||| |||| ||||    
T  36114342 ttatcatgataagtgcttatatattagctatttttatgacaaaagataaaataaagttaaattgtttttgtattagct 36114419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 41851486 - 41851531
Alignment:
Q  93 tatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    ||||| ||||||||||| || ||||||||||||||||||| |||||    
T  41851486 tatttatataggaaaagatacaataaagttaaattgtttttgtata 41851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 42907286 - 42907359
Alignment:
Q  69 catgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||| ||||||||  | |||||||||| ||||  | |||  |||||||||||||||||||||||| ||||||    
T  42907286 catgataagcacttacatataagctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagct 42907359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 44119722 - 44119775
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttc 133  Q
    ||||||| |||| ||||||||||| ||||| |||||||||||||| || |||||    
T  44119722 cttatgtataagttatttttatagtaaaagataaaataaagttaattttttttc 44119775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 32592537 - 32592577
Alignment:
Q  92 ctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||||| ||||| |||||||| |||||||||||||    
T  32592537 ctatttttatagaaaaagataaaataatgttaaattgtttt 32592577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 36114630 - 36114594
Alignment:
Q  105 aaaagttaaaataaagttaaattgttttcgtataagc 141  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  36114630 aaaagataaaataaagttaaattgtttttgtataagc 36114594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 40009391 - 40009460
Alignment:
Q  63 acttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||||| ||| ||||||| |||||| ||||||||  |||||  |||||||||||||||||||||    
T  40009391 acttatcatgattagcgcttatgtataagctgtttttataacaaaagacaaaataaagttaaattgtttt 40009460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 26935678 - 26935610
Alignment:
Q  84 tgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttttttcataa 152  Q
    |||||||||||||||||||  ||| | |||||||| |||||||||||||| ||| |||| |||||||||    
T  26935678 tgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataa 26935610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 28613665 - 28613606
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    |||||| |||||||||||||||  ||||| ||||| |||||||||||||||| |||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataag 28613606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 30133988 - 30134051
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagcttt 144  Q
    |||||| ||||||||||||| |  ||||| ||||||||||| || |||||||||||||||||||    
T  30133988 ttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataagcttt 30134051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 20881788 - 20881706
Alignment:
Q  60 agcacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||||| ||| ||||||| | |||||| | ||||| ||||| |||||  |||||||||||||| |||| |||||    
T  20881788 agcacttatcatgataagctcttatgtatgagctatatctatagcaaaagataaaacgaagttaaattgtttccgtacaagct 20881706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 30180009 - 30180051
Alignment:
Q  100 ataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  30180009 atagcaaaagataaaataaagttaaattgttttcgtataagct 30180051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 119856 - 119899
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttt 131  Q
    |||||||||| || |||||||| |||||||||||||||||||||    
T  119856 taagctatttctacaggaaaagataaaataaagttaaattgttt 119899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 40689107 - 40689056
Alignment:
Q  91 gctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagct 40689056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 36874101 - 36874035
Alignment:
Q  76 agcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||| |||||||||| |||| |||| | ||||||||| || |||| ||||| ||||||||    
T  36874101 agcacttatgtataagctatttctataagaaatgataaaataaatttgaattattttcttataagct 36874035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 39393647 - 39393589
Alignment:
Q  135 tataagcttttttcataagcgtcttggagaaattatgaaaataagcaaaaacagtttat 193  Q
    |||||| |||||||||||||   |||||||| |||||||||||||| ||||||| ||||    
T  39393647 tataagtttttttcataagctatttggagaacttatgaaaataagctaaaacagcttat 39393589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 45806450 - 45806408
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtt 130  Q
    |||||||||||||||| ||||| |||||||| |||||||||||    
T  45806450 taagctatttttatagcaaaagataaaataacgttaaattgtt 45806408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 46078093 - 46078143
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 138  Q
    |||| ||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  46078093 taagttatttttatagaaaaagataaaacaaagttaaattgtttttgtata 46078143  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 22759125 - 22759186
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    |||||| |||||||||| ||||  ||||| ||||||||||  ||||||||||| ||||||||    
T  22759125 ttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagct 22759186  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 33266434 - 33266397
Alignment:
Q  243 tagataagctcatgtaagtcaatccaaacataccctta 280  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  33266434 tagataagctcaaataagtcaatccaaacataccctta 33266397  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 34083644 - 34083595
Alignment:
Q  93 tatttttataggaaaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||| ||||| ||||| |||||||||||||||||||||  |||||||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagct 34083595  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 45004716 - 45004753
Alignment:
Q  92 ctatttttataggaaaagttaaaataaagttaaattgt 129  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  45004716 ctatttttatagcaaaagataaaataaagttaaattgt 45004753  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 1417203 - 1417263
Alignment:
Q  81 ttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagc 141  Q
    |||||| ||| |||||| ||||  ||||| ||||||||||| ||||||||||| |||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagc 1417263  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 8094234 - 8094270
Alignment:
Q  106 aaagttaaaataaagttaaattgttttcgtataagct 142  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  8094234 aaagttaaaataaagttaaattggtttggtataagct 8094270  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 35536045 - 35536105
Alignment:
Q  80 cttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataag 140  Q
    ||||||| |||||||||| ||||  | ||| ||||||||||| ||||||||||| ||||||    
T  35536045 cttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataag 35536105  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 43153026 - 43152982
Alignment:
Q  88 taagctatttttataggaaaagttaaaataaagttaaattgtttt 132  Q
    |||||||||| ||||  ||||| ||||||||||||||||||||||    
T  43153026 taagctatttctataacaaaagataaaataaagttaaattgtttt 43152982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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