View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10365_high_3 (Length: 481)

Name: NF10365_high_3
Description: NF10365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10365_high_3
NF10365_high_3
[»] chr8 (55 HSPs)
chr8 (307-471)||(36119403-36119567)
chr8 (109-294)||(43599303-43599489)
chr8 (109-295)||(10989167-10989354)
chr8 (109-296)||(15010955-15011143)
chr8 (104-295)||(33435670-33435860)
chr8 (171-295)||(8559572-8559696)
chr8 (170-294)||(33435875-33435999)
chr8 (171-295)||(20760649-20760773)
chr8 (198-296)||(12941560-12941658)
chr8 (182-292)||(35561660-35561770)
chr8 (170-288)||(36039782-36039900)
chr8 (171-295)||(30176453-30176577)
chr8 (170-294)||(40902381-40902505)
chr8 (177-295)||(36037185-36037299)
chr8 (171-294)||(10989023-10989146)
chr8 (230-289)||(30117484-30117543)
chr8 (215-294)||(43901050-43901129)
chr8 (190-296)||(18313774-18313880)
chr8 (171-294)||(22451336-22451463)
chr8 (171-296)||(16454624-16454749)
chr8 (180-293)||(42228764-42228877)
chr8 (171-294)||(15010810-15010934)
chr8 (215-294)||(5720900-5720979)
chr8 (109-258)||(35561486-35561637)
chr8 (190-279)||(26122752-26122841)
chr8 (171-273)||(3183900-3184002)
chr8 (177-278)||(34248085-34248186)
chr8 (215-295)||(15968097-15968179)
chr8 (171-278)||(18905864-18905971)
chr8 (215-294)||(45122303-45122381)
chr8 (197-294)||(4195965-4196063)
chr8 (224-294)||(25186764-25186834)
chr8 (249-294)||(8559745-8559790)
chr8 (177-278)||(34248367-34248468)
chr8 (171-256)||(36997196-36997281)
chr8 (215-286)||(3895131-3895202)
chr8 (235-294)||(8559852-8559910)
chr8 (215-294)||(15968461-15968540)
chr8 (171-278)||(32931409-32931516)
chr8 (218-288)||(8056273-8056343)
chr8 (229-294)||(5496553-5496618)
chr8 (171-295)||(15856964-15857089)
chr8 (249-294)||(15857171-15857216)
chr8 (177-293)||(8056482-8056598)
chr8 (254-294)||(43599510-43599550)
chr8 (215-294)||(3895372-3895450)
chr8 (171-278)||(21085137-21085244)
chr8 (171-278)||(21653335-21653442)
chr8 (171-278)||(21653812-21653919)
chr8 (171-246)||(22277564-22277639)
chr8 (210-293)||(37537123-37537206)
chr8 (171-278)||(43984305-43984412)
chr8 (248-294)||(30065983-30066029)
chr8 (177-278)||(23027823-23027924)
chr8 (190-294)||(39124916-39125020)
[»] chr7 (77 HSPs)
chr7 (109-296)||(9378783-9378971)
chr7 (109-295)||(13310351-13310538)
chr7 (109-294)||(23396601-23396787)
chr7 (109-295)||(40703785-40703972)
chr7 (170-294)||(6783030-6783154)
chr7 (171-294)||(33855683-33855806)
chr7 (145-288)||(31374763-31374907)
chr7 (197-294)||(9378992-9379089)
chr7 (171-294)||(23821665-23821788)
chr7 (179-294)||(35866636-35866751)
chr7 (145-294)||(16564886-16565036)
chr7 (145-294)||(16600626-16600776)
chr7 (178-296)||(39808593-39808711)
chr7 (171-292)||(6813067-6813188)
chr7 (200-296)||(6782816-6782912)
chr7 (216-295)||(6751743-6751822)
chr7 (215-294)||(16565090-16565169)
chr7 (215-294)||(16600493-16600572)
chr7 (215-294)||(31357708-31357787)
chr7 (216-294)||(6751539-6751617)
chr7 (200-294)||(29252568-29252662)
chr7 (169-278)||(1661178-1661287)
chr7 (177-294)||(40703647-40703764)
chr7 (215-295)||(33833941-33834021)
chr7 (119-294)||(38948350-38948525)
chr7 (109-294)||(6813211-6813395)
chr7 (215-294)||(22841044-22841123)
chr7 (229-295)||(5775873-5775939)
chr7 (198-294)||(2179646-2179743)
chr7 (230-294)||(48113989-48114053)
chr7 (145-294)||(258423-258571)
chr7 (215-294)||(4258033-4258112)
chr7 (145-287)||(8681883-8682026)
chr7 (215-294)||(33834147-33834226)
chr7 (137-290)||(43565960-43566113)
chr7 (237-294)||(23390582-23390639)
chr7 (226-294)||(33855473-33855541)
chr7 (177-289)||(36621019-36621130)
chr7 (226-294)||(43366399-43366467)
chr7 (239-294)||(4258261-4258316)
chr7 (219-294)||(10903314-10903389)
chr7 (219-294)||(10903521-10903596)
chr7 (171-286)||(23396814-23396929)
chr7 (184-294)||(5266351-5266461)
chr7 (229-286)||(47856038-47856095)
chr7 (171-278)||(1663593-1663701)
chr7 (171-294)||(2232087-2232211)
chr7 (177-257)||(29780176-29780256)
chr7 (191-295)||(36237793-36237897)
chr7 (190-278)||(37272053-37272141)
chr7 (177-272)||(7135238-7135333)
chr7 (251-294)||(23821540-23821583)
chr7 (249-303)||(6214302-6214356)
chr7 (215-272)||(29645829-29645886)
chr7 (178-271)||(39808460-39808553)
chr7 (181-278)||(43384279-43384376)
chr7 (235-295)||(21557007-21557067)
chr7 (190-278)||(27585264-27585352)
chr7 (170-246)||(28910072-28910148)
chr7 (190-294)||(40137704-40137808)
chr7 (171-278)||(12578449-12578556)
chr7 (180-287)||(24426752-24426858)
chr7 (215-294)||(29646056-29646135)
chr7 (177-272)||(43288278-43288373)
chr7 (177-272)||(43288546-43288641)
chr7 (216-294)||(30768410-30768488)
chr7 (184-278)||(34748786-34748880)
chr7 (177-278)||(257262-257363)
chr7 (196-277)||(14691081-14691162)
chr7 (177-250)||(40703406-40703479)
chr7 (177-253)||(12518165-12518241)
chr7 (170-258)||(34590556-34590644)
chr7 (182-278)||(36092599-36092695)
chr7 (170-270)||(43167881-43167981)
chr7 (190-278)||(43383954-43384042)
chr7 (177-253)||(48116291-48116367)
chr7 (228-272)||(49040580-49040624)
[»] chr5 (71 HSPs)
chr5 (119-298)||(18914304-18914484)
chr5 (109-295)||(13413575-13413761)
chr5 (109-294)||(38376723-38376909)
chr5 (109-295)||(20720476-20720663)
chr5 (119-288)||(40168977-40169147)
chr5 (109-294)||(43490389-43490575)
chr5 (109-292)||(3015549-3015731)
chr5 (170-294)||(18914149-18914273)
chr5 (109-287)||(34457095-34457274)
chr5 (177-294)||(28358030-28358147)
chr5 (170-286)||(35526976-35527092)
chr5 (171-294)||(3015406-3015529)
chr5 (171-294)||(34457295-34457418)
chr5 (171-296)||(3762896-3763021)
chr5 (109-295)||(48237-48422)
chr5 (171-294)||(24125054-24125177)
chr5 (170-295)||(35527262-35527388)
chr5 (177-294)||(48099-48216)
chr5 (177-294)||(2908557-2908674)
chr5 (199-294)||(43490273-43490368)
chr5 (119-294)||(2908705-2908881)
chr5 (109-294)||(28156028-28156211)
chr5 (215-295)||(39268009-39268089)
chr5 (171-294)||(15287045-15287168)
chr5 (236-294)||(18107532-18107590)
chr5 (190-292)||(30330643-30330745)
chr5 (215-294)||(36878318-36878397)
chr5 (171-278)||(38131772-38131879)
chr5 (180-294)||(18107825-18107939)
chr5 (226-292)||(32501205-32501271)
chr5 (169-294)||(11632423-11632548)
chr5 (181-294)||(37656731-37656844)
chr5 (181-294)||(37781843-37781956)
chr5 (190-294)||(395359-395463)
chr5 (190-294)||(39268218-39268322)
chr5 (145-294)||(36307885-36308034)
chr5 (197-294)||(22732752-22732849)
chr5 (170-278)||(13844021-13844129)
chr5 (170-294)||(28156231-28156354)
chr5 (215-294)||(10668352-10668431)
chr5 (216-286)||(17135519-17135589)
chr5 (215-293)||(18873227-18873305)
chr5 (215-296)||(4563724-4563805)
chr5 (229-294)||(17130036-17130096)
chr5 (177-278)||(29432420-29432521)
chr5 (177-278)||(37995629-37995730)
chr5 (119-206)||(35527114-35527202)
chr5 (171-278)||(873685-873792)
chr5 (171-278)||(1028082-1028189)
chr5 (215-294)||(5127946-5128025)
chr5 (180-294)||(2716538-2716652)
chr5 (171-294)||(4296654-4296779)
chr5 (253-294)||(13413782-13413823)
chr5 (237-294)||(29008064-29008121)
chr5 (171-272)||(40168848-40168949)
chr5 (190-278)||(22196561-22196649)
chr5 (170-246)||(24994109-24994185)
chr5 (240-288)||(35527199-35527247)
chr5 (177-257)||(38663276-38663356)
chr5 (171-278)||(13843705-13843812)
chr5 (171-253)||(12965235-12965317)
chr5 (177-294)||(15286845-15286963)
chr5 (215-289)||(30870918-30870992)
chr5 (190-267)||(1892098-1892175)
chr5 (147-208)||(6918927-6918988)
chr5 (147-208)||(6919174-6919235)
chr5 (177-246)||(24918201-24918270)
chr5 (230-294)||(1893780-1893844)
chr5 (180-292)||(2716337-2716449)
chr5 (184-244)||(24792124-24792184)
chr5 (215-287)||(40961748-40961820)
[»] chr6 (49 HSPs)
chr6 (109-294)||(16876936-16877122)
chr6 (170-294)||(28149785-28149909)
chr6 (171-294)||(26098746-26098869)
chr6 (171-294)||(15102613-15102737)
chr6 (171-294)||(15102743-15102863)
chr6 (171-294)||(25999015-25999138)
chr6 (171-294)||(11313371-11313494)
chr6 (171-294)||(15101100-15101223)
chr6 (171-294)||(16590176-16590299)
chr6 (171-294)||(16605081-16605204)
chr6 (171-294)||(26098334-26098457)
chr6 (150-294)||(26098540-26098685)
chr6 (109-294)||(11316835-11317019)
chr6 (235-294)||(11317040-11317099)
chr6 (171-294)||(25998809-25998932)
chr6 (171-272)||(5269262-5269363)
chr6 (177-294)||(24558575-24558692)
chr6 (171-287)||(19291907-19292023)
chr6 (170-294)||(24558780-24558904)
chr6 (171-278)||(10418327-10418434)
chr6 (165-278)||(12134466-12134579)
chr6 (171-288)||(16876819-16876936)
chr6 (145-269)||(19712571-19712696)
chr6 (200-296)||(6623443-6623539)
chr6 (235-291)||(30526832-30526889)
chr6 (235-291)||(30539415-30539471)
chr6 (171-278)||(19054501-19054608)
chr6 (171-294)||(19712393-19712516)
chr6 (215-294)||(26394543-26394622)
chr6 (171-278)||(30539243-30539350)
chr6 (177-295)||(15293869-15293987)
chr6 (109-202)||(18494407-18494501)
chr6 (202-287)||(2902819-2902902)
chr6 (177-278)||(8144025-8144126)
chr6 (177-278)||(10733433-10733534)
chr6 (171-278)||(1744831-1744938)
chr6 (171-278)||(24055098-24055205)
chr6 (192-294)||(18494284-18494386)
chr6 (235-278)||(31926-31969)
chr6 (200-271)||(25184018-25184089)
chr6 (248-294)||(12124760-12124806)
chr6 (171-245)||(17147894-17147968)
chr6 (177-231)||(22911485-22911539)
chr6 (237-294)||(2923011-2923068)
chr6 (171-272)||(17096687-17096788)
chr6 (177-278)||(28072467-28072568)
chr6 (245-294)||(30527034-30527083)
chr6 (177-253)||(27914321-27914397)
chr6 (215-294)||(29742469-29742546)
[»] chr4 (91 HSPs)
chr4 (109-294)||(12016817-12017003)
chr4 (109-294)||(17077072-17077256)
chr4 (180-294)||(28245985-28246099)
chr4 (109-295)||(28245782-28245964)
chr4 (171-294)||(17076929-17077052)
chr4 (171-295)||(43943664-43943788)
chr4 (171-294)||(25753594-25753717)
chr4 (171-294)||(27634315-27634438)
chr4 (122-294)||(5488359-5488532)
chr4 (171-294)||(12016672-12016795)
chr4 (171-296)||(28395168-28395292)
chr4 (170-294)||(29113441-29113565)
chr4 (171-294)||(21498523-21498646)
chr4 (171-294)||(53863897-53864020)
chr4 (171-294)||(54210369-54210492)
chr4 (145-294)||(56511289-56511439)
chr4 (189-293)||(3055776-3055880)
chr4 (190-294)||(28497222-28497326)
chr4 (171-294)||(1922980-1923103)
chr4 (171-294)||(8559960-8560083)
chr4 (109-294)||(33629651-33629835)
chr4 (197-294)||(39110899-39110996)
chr4 (155-278)||(990555-990679)
chr4 (215-294)||(8304988-8305067)
chr4 (215-294)||(23350791-23350870)
chr4 (171-294)||(56511496-56511619)
chr4 (200-294)||(49380898-49380992)
chr4 (229-290)||(33629917-33629978)
chr4 (145-280)||(10390437-10390573)
chr4 (171-295)||(22865761-22865884)
chr4 (187-287)||(52827237-52827337)
chr4 (171-278)||(991212-991319)
chr4 (219-294)||(47491883-47491958)
chr4 (171-272)||(23018484-23018585)
chr4 (218-294)||(3640198-3640274)
chr4 (177-280)||(7892646-7892750)
chr4 (109-208)||(27634457-27634557)
chr4 (170-278)||(29669351-29669459)
chr4 (172-272)||(45426926-45427026)
chr4 (180-294)||(26806503-26806615)
chr4 (109-227)||(35399342-35399461)
chr4 (190-289)||(50307273-50307372)
chr4 (171-278)||(51469489-51469596)
chr4 (171-278)||(52214623-52214730)
chr4 (171-246)||(53386101-53386176)
chr4 (171-278)||(53740190-53740297)
chr4 (229-295)||(42312821-42312887)
chr4 (216-294)||(45684208-45684286)
chr4 (200-282)||(49380664-49380746)
chr4 (253-294)||(33629596-33629637)
chr4 (253-294)||(33629855-33629896)
chr4 (170-278)||(15665161-15665269)
chr4 (190-286)||(20093332-20093428)
chr4 (190-294)||(33797117-33797221)
chr4 (215-294)||(3640448-3640527)
chr4 (170-253)||(27048125-27048208)
chr4 (171-278)||(29669667-29669774)
chr4 (171-278)||(51470491-51470598)
chr4 (172-250)||(400373-400451)
chr4 (190-272)||(5212009-5212091)
chr4 (184-294)||(14945135-14945245)
chr4 (226-292)||(20441500-20441566)
chr4 (172-278)||(43972363-43972469)
chr4 (200-285)||(7806413-7806497)
chr4 (219-272)||(9758318-9758371)
chr4 (171-256)||(45427241-45427326)
chr4 (217-278)||(52810660-52810721)
chr4 (177-278)||(56509617-56509718)
chr4 (171-278)||(34205982-34206090)
chr4 (190-294)||(39110709-39110813)
chr4 (225-265)||(40197229-40197269)
chr4 (171-278)||(13254391-13254498)
chr4 (215-270)||(14115524-14115579)
chr4 (179-278)||(21497680-21497779)
chr4 (179-278)||(21498195-21498294)
chr4 (215-294)||(21647614-21647693)
chr4 (171-278)||(27048397-27048504)
chr4 (178-272)||(34206251-34206346)
chr4 (190-293)||(35565072-35565174)
chr4 (171-278)||(36558455-36558562)
chr4 (235-294)||(53559358-53559417)
chr4 (215-294)||(53720703-53720782)
chr4 (171-278)||(53738197-53738304)
chr4 (198-272)||(4645866-4645940)
chr4 (171-245)||(6778665-6778739)
chr4 (172-222)||(39910406-39910456)
chr4 (181-294)||(5065845-5065958)
chr4 (230-279)||(7198034-7198083)
chr4 (109-170)||(21498441-21498502)
chr4 (150-269)||(9938466-9938586)
chr4 (226-278)||(37288913-37288965)
[»] chr3 (85 HSPs)
chr3 (123-294)||(39078711-39078883)
chr3 (110-300)||(9264427-9264618)
chr3 (110-294)||(4191049-4191234)
chr3 (109-295)||(51642561-51642749)
chr3 (109-294)||(9264219-9264405)
chr3 (109-294)||(37058697-37058883)
chr3 (170-294)||(50692518-50692642)
chr3 (171-292)||(49477528-49477649)
chr3 (119-294)||(22407584-22407760)
chr3 (171-295)||(40230628-40230752)
chr3 (120-294)||(50692315-50692486)
chr3 (171-294)||(9264075-9264198)
chr3 (109-295)||(37223566-37223753)
chr3 (171-294)||(40230424-40230546)
chr3 (119-294)||(53640108-53640284)
chr3 (171-294)||(22339733-22339856)
chr3 (109-287)||(39956600-39956779)
chr3 (197-294)||(54495523-54495620)
chr3 (171-295)||(4029633-4029757)
chr3 (170-294)||(54591453-54591577)
chr3 (109-272)||(10758934-10759098)
chr3 (171-294)||(25627909-25628033)
chr3 (170-294)||(35011856-35011980)
chr3 (190-294)||(51338449-51338553)
chr3 (145-295)||(35011648-35011799)
chr3 (171-294)||(51642417-51642540)
chr3 (215-296)||(32034081-32034162)
chr3 (109-264)||(49477349-49477505)
chr3 (170-294)||(50338370-50338494)
chr3 (194-294)||(53639977-53640077)
chr3 (171-287)||(33909619-33909733)
chr3 (177-294)||(35015477-35015594)
chr3 (171-272)||(50203846-50203947)
chr3 (171-287)||(19820517-19820632)
chr3 (200-272)||(32215548-32215620)
chr3 (171-294)||(10758757-10758880)
chr3 (169-284)||(11414366-11414480)
chr3 (172-294)||(38421977-38422097)
chr3 (171-294)||(39956456-39956579)
chr3 (215-294)||(40926446-40926525)
chr3 (171-278)||(43101360-43101467)
chr3 (170-280)||(44461055-44461165)
chr3 (216-298)||(53761432-53761514)
chr3 (177-294)||(42258902-42259019)
chr3 (177-278)||(44145116-44145217)
chr3 (171-287)||(12800089-12800205)
chr3 (190-294)||(44145403-44145506)
chr3 (171-278)||(4256242-4256349)
chr3 (171-294)||(22407430-22407553)
chr3 (215-294)||(25578714-25578792)
chr3 (171-286)||(26366731-26366846)
chr3 (171-286)||(29763685-29763799)
chr3 (216-287)||(34992868-34992939)
chr3 (215-294)||(35358486-35358565)
chr3 (219-290)||(40927026-40927097)
chr3 (219-294)||(47702461-47702536)
chr3 (215-289)||(26926904-26926978)
chr3 (248-294)||(29369793-29369839)
chr3 (171-268)||(16078852-16078949)
chr3 (177-294)||(21832686-21832803)
chr3 (219-288)||(39269498-39269567)
chr3 (226-295)||(42637791-42637860)
chr3 (230-294)||(5440569-5440633)
chr3 (219-287)||(34992576-34992644)
chr3 (171-294)||(21832188-21832311)
chr3 (215-294)||(40926695-40926774)
chr3 (171-278)||(54369047-54369154)
chr3 (224-294)||(26915108-26915178)
chr3 (235-289)||(42604905-42604959)
chr3 (170-256)||(44573966-44574052)
chr3 (170-294)||(21833516-21833640)
chr3 (179-278)||(24539161-24539261)
chr3 (219-295)||(39018827-39018903)
chr3 (171-294)||(51836290-51836411)
chr3 (179-278)||(3985781-3985880)
chr3 (171-278)||(21750483-21750590)
chr3 (171-278)||(34715444-34715551)
chr3 (229-292)||(42311207-42311270)
chr3 (171-246)||(44573679-44573754)
chr3 (177-272)||(46139246-46139341)
chr3 (177-278)||(13769286-13769387)
chr3 (197-278)||(27219337-27219418)
chr3 (215-272)||(37040016-37040073)
chr3 (190-278)||(14170007-14170095)
chr3 (190-278)||(44573334-44573422)
[»] chr2 (72 HSPs)
chr2 (109-295)||(3435412-3435599)
chr2 (109-295)||(12431889-12432076)
chr2 (109-294)||(33985901-33986087)
chr2 (119-294)||(29684003-29684179)
chr2 (177-294)||(17727396-17727513)
chr2 (170-295)||(20998977-20999102)
chr2 (190-294)||(883609-883713)
chr2 (107-287)||(29101749-29101931)
chr2 (197-294)||(884049-884146)
chr2 (169-294)||(32667175-32667300)
chr2 (170-294)||(16006969-16007093)
chr2 (183-294)||(27545117-27545228)
chr2 (171-294)||(34775349-34775472)
chr2 (109-289)||(883847-884028)
chr2 (170-294)||(33985759-33985881)
chr2 (171-294)||(12432097-12432220)
chr2 (171-294)||(25621274-25621397)
chr2 (171-294)||(31761124-31761247)
chr2 (192-294)||(19860029-19860131)
chr2 (171-272)||(6183355-6183456)
chr2 (190-295)||(39386661-39386766)
chr2 (178-294)||(32666969-32667085)
chr2 (215-294)||(6986449-6986528)
chr2 (228-295)||(12419829-12419896)
chr2 (171-294)||(40009966-40010089)
chr2 (216-294)||(29695373-29695451)
chr2 (190-295)||(7257616-7257721)
chr2 (171-294)||(8044534-8044658)
chr2 (171-278)||(3976460-3976567)
chr2 (224-295)||(19859916-19859987)
chr2 (197-294)||(29676286-29676383)
chr2 (170-278)||(18901852-18901960)
chr2 (200-294)||(10570927-10571021)
chr2 (215-289)||(26847276-26847349)
chr2 (224-289)||(4721846-4721911)
chr2 (177-253)||(10429772-10429848)
chr2 (178-258)||(10536925-10537005)
chr2 (190-294)||(10542071-10542175)
chr2 (230-294)||(22447297-22447361)
chr2 (177-265)||(33277548-33277636)
chr2 (171-278)||(42768323-42768428)
chr2 (171-278)||(3976992-3977099)
chr2 (170-221)||(15820100-15820151)
chr2 (171-278)||(23054334-23054441)
chr2 (171-278)||(43195792-43195899)
chr2 (192-278)||(7877852-7877938)
chr2 (177-255)||(10849486-10849564)
chr2 (172-294)||(29684211-29684333)
chr2 (145-294)||(39108080-39108230)
chr2 (235-296)||(14127240-14127301)
chr2 (202-295)||(18607273-18607366)
chr2 (171-256)||(21214190-21214275)
chr2 (229-294)||(21734408-21734473)
chr2 (202-258)||(10485222-10485278)
chr2 (109-200)||(29695471-29695563)
chr2 (171-243)||(39108398-39108470)
chr2 (179-278)||(25286257-25286356)
chr2 (183-294)||(28895519-28895629)
chr2 (200-271)||(32810894-32810965)
chr2 (167-278)||(43169250-43169361)
chr2 (248-294)||(10485170-10485216)
chr2 (216-286)||(17265009-17265079)
chr2 (171-229)||(37812272-37812330)
chr2 (180-286)||(38760315-38760421)
chr2 (171-229)||(39108277-39108335)
chr2 (177-278)||(11969060-11969161)
chr2 (170-222)||(5424770-5424822)
chr2 (215-267)||(6986376-6986428)
chr2 (134-244)||(7257088-7257200)
chr2 (170-294)||(13839247-13839371)
chr2 (190-278)||(21213893-21213981)
chr2 (164-208)||(22447178-22447222)
[»] chr1 (81 HSPs)
chr1 (109-294)||(29273151-29273337)
chr1 (109-294)||(39649010-39649196)
chr1 (119-286)||(43361693-43361861)
chr1 (171-294)||(1233918-1234041)
chr1 (171-289)||(41812647-41812765)
chr1 (109-272)||(15391833-15391997)
chr1 (109-295)||(21428192-21428380)
chr1 (171-294)||(52846838-52846961)
chr1 (171-297)||(5222683-5222809)
chr1 (172-294)||(15392017-15392139)
chr1 (171-294)||(21428047-21428170)
chr1 (171-286)||(43361541-43361656)
chr1 (177-294)||(22892683-22892800)
chr1 (171-294)||(24382349-24382472)
chr1 (171-294)||(48558310-48558433)
chr1 (145-294)||(38871117-38871267)
chr1 (170-294)||(2997044-2997168)
chr1 (171-295)||(13959393-13959517)
chr1 (215-294)||(29413340-29413419)
chr1 (215-294)||(52921500-52921579)
chr1 (177-294)||(21538929-21539046)
chr1 (177-286)||(33342273-33342382)
chr1 (171-295)||(11018845-11018969)
chr1 (215-287)||(22826778-22826850)
chr1 (210-294)||(39648906-39648989)
chr1 (171-278)||(2697320-2697427)
chr1 (171-294)||(9380892-9381015)
chr1 (171-278)||(17419795-17419902)
chr1 (109-227)||(29272992-29273111)
chr1 (119-208)||(5325069-5325159)
chr1 (150-294)||(2997228-2997373)
chr1 (171-278)||(4022114-4022221)
chr1 (236-295)||(45395543-45395602)
chr1 (224-294)||(24382193-24382263)
chr1 (200-294)||(49142674-49142767)
chr1 (190-294)||(25799112-25799217)
chr1 (190-278)||(38474291-38474379)
chr1 (171-294)||(38870938-38871062)
chr1 (171-278)||(8520082-8520189)
chr1 (216-295)||(11590411-11590490)
chr1 (171-266)||(15013545-15013640)
chr1 (199-294)||(20428991-20429086)
chr1 (235-294)||(29265910-29265969)
chr1 (177-272)||(40664224-40664319)
chr1 (177-272)||(43423293-43423388)
chr1 (171-253)||(21638255-21638337)
chr1 (216-294)||(24382602-24382680)
chr1 (230-292)||(29413136-29413198)
chr1 (177-258)||(24131876-24131957)
chr1 (249-294)||(39648827-39648872)
chr1 (109-233)||(46098530-46098655)
chr1 (235-292)||(49828665-49828722)
chr1 (215-295)||(11581746-11581826)
chr1 (190-278)||(20735763-20735851)
chr1 (190-294)||(28119750-28119854)
chr1 (230-294)||(42845069-42845133)
chr1 (230-294)||(45982174-45982238)
chr1 (215-294)||(47377827-47377909)
chr1 (171-286)||(9381099-9381214)
chr1 (216-287)||(15391747-15391818)
chr1 (171-278)||(31305719-31305826)
chr1 (235-294)||(36332303-36332362)
chr1 (215-294)||(47086310-47086389)
chr1 (200-294)||(49895345-49895437)
chr1 (171-257)||(12233312-12233398)
chr1 (256-294)||(22892495-22892533)
chr1 (177-271)||(27957804-27957898)
chr1 (235-294)||(36331907-36331962)
chr1 (249-294)||(12314570-12314615)
chr1 (241-294)||(18374517-18374570)
chr1 (171-256)||(20735552-20735637)
chr1 (177-250)||(22892428-22892501)
chr1 (171-256)||(33879767-33879852)
chr1 (171-256)||(33964403-33964488)
chr1 (230-282)||(10017376-10017428)
chr1 (109-208)||(12314449-12314549)
chr1 (177-272)||(13356911-13357007)
chr1 (190-278)||(19937051-19937139)
chr1 (230-294)||(20429283-20429347)
chr1 (177-257)||(35024242-35024322)
chr1 (190-278)||(45858663-45858751)
[»] scaffold0434 (2 HSPs)
scaffold0434 (109-294)||(13298-13484)
scaffold0434 (171-294)||(13505-13628)
[»] scaffold0029 (1 HSPs)
scaffold0029 (171-287)||(76851-76967)
[»] scaffold0989 (1 HSPs)
scaffold0989 (171-293)||(2936-3058)
[»] scaffold0054 (2 HSPs)
scaffold0054 (171-294)||(21252-21376)
scaffold0054 (177-231)||(11338-11392)
[»] scaffold1138 (1 HSPs)
scaffold1138 (171-287)||(1862-1978)
[»] scaffold0060 (2 HSPs)
scaffold0060 (171-294)||(13621-13744)
scaffold0060 (229-293)||(59518-59579)
[»] scaffold0419 (1 HSPs)
scaffold0419 (171-246)||(4228-4303)
[»] scaffold0339 (1 HSPs)
scaffold0339 (226-295)||(15696-15765)
[»] scaffold0166 (1 HSPs)
scaffold0166 (184-244)||(34507-34567)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 1e-85; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 307 - 471
Target Start/End: Complemental strand, 36119567 - 36119403
Alignment:
Q  307 tcatgaaacgtgctataatgtggacagaattggaactatgaactcacctgtcaacattttctgctaggtaagtaaaataactgcaaaatgcagaaatatt 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36119567 tcatgaaacgtgctataatgtggacagaattggaactatgaactcacctgtcaacattttctgctaggtaagtataataactgcaaaatgcagaaatatt 36119468  T
Q  407 aatagaaatctaaatcattacttttaaaatgttgtgtacattgaacaaagcattctccatctctg 471  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36119467 aatagaaatctaaatcattacttttaaaatgttgtgtacattgaacaaagcattctccatctctg 36119403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 43599489 - 43599303
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  43599489 ctcttttggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 43599390  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  43599389 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 43599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 10989167 - 10989354
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || ||| |||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  10989167 ctctttgggcttgatgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 10989266  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||| |||||||    
T  10989267 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaataa 10989354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 109 - 296
Target Start/End: Original strand, 15010955 - 15011143
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || ||||||||||||||  ||||||| | |||| ||||||| ||| ||| ||||| ||||| |||||||||  | |||||| |||||||||||    
T  15010955 ctctttgggcttggtgcgtgaatagatttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcttaactcatccttacaaaacc 15011054  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 296  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||| ||||||||    
T  15011055 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaataaa 15011143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 295
Target Start/End: Complemental strand, 33435860 - 33435670
Alignment:
Q  104 tagcgctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttaca 202  Q
    |||| |||||| || ||||||||||||| |||  |||  | |||| ||||||| ||| | | ||||| ||||| |||||||||||| |||||| ||||||    
T  33435860 tagcactctttgggcttggtgcgtgaatcagt--aggtggcccttgaattcgacaagctatgataccatgttgaaatttggggtctaactcatccttaca 33435763  T
Q  203 aaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    ||||||| ||| ||| |||| |||||||||||| |||||||||| ||||||||| | |||||||||||||  |||||| ||||||||||||||    
T  33435762 aaaccgacttgtaagatgaggattgtctcctttatataaactcttatcaagagttttatctatccgatgtgagacttgagtttttcccaataa 33435670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 8559696 - 8559572
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  8559696 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 8559597  T
Q  271 gtaggacttgggtttttcccaataa 295  Q
    || ||||||||||||||||||||||    
T  8559596 gtgggacttgggtttttcccaataa 8559572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 33435999 - 33435875
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| |||||  ||||| ||||||  |||||||||||  ||| |||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||    
T  33435999 ctgttgaaatttaaggtctaactcatctttacaaaaccggcttgtaaggtgaggattgtctcctttatataaactcttatcaagagtcttatctatccga 33435900  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||||||||||||||||    
T  33435899 tgtgggacttgggtttttcccaata 33435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 20760649 - 20760773
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||||||| |||| |||||||| |||| ||| | ||||||||||||  ||||||||||  ||||||||||    
T  20760649 tgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcatctttataaactcttctcaagagtcttgtctatccgat 20760748  T
Q  271 gtaggacttgggtttttcccaataa 295  Q
    || ||||||||||||||||||||||    
T  20760749 gtgggacttgggtttttcccaataa 20760773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 12941658 - 12941560
Alignment:
Q  198 ttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 296  Q
    |||||||||||| |||||| ||||| | |  ||||||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||    
T  12941658 ttacaaaaccgacttgcaaagtgagtagtacctcctttttataaactctcatcatgagtctcatctatctgatgtggtacttgggtttttcccaataaa 12941560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 182 - 292
Target Start/End: Complemental strand, 35561770 - 35561660
Alignment:
Q  182 ggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgg 281  Q
    ||||||| |||||| ||||||||||||   ||||||||||| |||| ||||| ||||||||||||  |||||| ||| ||||||||||||| ||||||||    
T  35561770 ggggtctaactcatccttacaaaaccggcatgcaaggtgaggattgcctcctctttataaactcttctcaagaatcttatctatccgatgtgggacttgg 35561671  T
Q  282 gtttttcccaa 292  Q
    |||||||||||    
T  35561670 gtttttcccaa 35561660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 36039782 - 36039900
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| |||||||||||| |||||| ||||||||||||  |||  ||||||| | ||  |||| |||||||||||||||||||||||||||||||||||    
T  36039782 ctgttgaaatttggggtctaactcatccttacaaaaccggcttgtgaggtgagtagtgcatcctctttataaactctcatcaagagtctcatctatccga 36039881  T
Q  270 tgtaggacttgggtttttc 288  Q
    |||  || |||||||||||    
T  36039882 tgtgagatttgggtttttc 36039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 30176453 - 30176577
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| |||| || |||||| ||||||||||||  |||  ||||||  | || ||||| ||||||||||||||||||||||||| ||||||||||    
T  30176453 tgttgaaattcggggcctaactcatccttacaaaaccggcttgtgaggtgaagagtgcctcctctttataaactctcatcaagagtctcgtctatccgat 30176552  T
Q  271 gtaggacttgggtttttcccaataa 295  Q
    || ||||||| ||||||||||||||    
T  30176553 gtgggacttgagtttttcccaataa 30176577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 40902381 - 40902505
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || ||| || ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||    
T  40902381 ctgttgaaatttggggcctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccga 40902480  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| | |||||||||||||||||||    
T  40902481 tgtggaacttgggtttttcccaata 40902505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 177 - 295
Target Start/End: Complemental strand, 36037299 - 36037185
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||||||||||| |||||| ||||||||||||  |||  ||||||| | ||  |||| |||||||||||||||||||||||||||||||||||||| |||    
T  36037299 aatttggggtctaactcatccttacaaaaccggcttgtgaggtgaggagtgcatcctctttataaactctcatcaagagtctcatctatccgatgtggga 36037200  T
Q  277 cttgggtttttcccaataa 295  Q
    |    ||||||||||||||    
T  36037199 c----gtttttcccaataa 36037185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 10989023 - 10989146
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||| | |||    
T  10989023 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctacctgat 10989122  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||| ||||||    
T  10989123 gtgggacttgggttttttccaata 10989146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 30117484 - 30117543
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30117484 tcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcc 30117543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 43901050 - 43901129
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  43901050 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 43901129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 190 - 296
Target Start/End: Complemental strand, 18313880 - 18313774
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| ||||||||||| | ||| |||||||| |||| ||||| | |||||||| | | ||||||||| ||||||||||||| |||||||| |||||||    
T  18313880 actcatccttacaaaacctacttgaaaggtgaggattgcctcctctatataaacttttaacaagagtcttatctatccgatgtgggacttggatttttcc 18313781  T
Q  290 caataaa 296  Q
    |||||||    
T  18313780 caataaa 18313774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 22451463 - 22451336
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaa----gagtctcatctatc 266  Q
    ||||| |||||||||  | |||||| ||||||||||||  |||  ||||||||| |||||||| |||||||| |||||||||    ||||||| ||||||    
T  22451463 tgttgaaatttggggcataactcatccttacaaaaccggcttgtgaggtgagaagtgtctcctctttataaattctcatcaatcaagagtctcgtctatc 22451364  T
Q  267 cgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||||  |||||||||||||    
T  22451363 cgatgtaggacttaagtttttcccaata 22451336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 171 - 296
Target Start/End: Original strand, 16454624 - 16454749
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  | |||||||| |||||||||||    
T  16454624 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttcttaagagtcttatctatccgat 16454723  T
Q  271 gtaggacttgggtttttcccaataaa 296  Q
    ||  ||||||| ||||| ||||||||    
T  16454724 gtgagacttggtttttttccaataaa 16454749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 42228877 - 42228764
Alignment:
Q  180 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    ||||||||| |||||| ||||||||| ||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||||    
T  42228877 ttggggtctaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggactt 42228778  T
Q  280 gggtttttcccaat 293  Q
     | |||||||||||    
T  42228777 agatttttcccaat 42228764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 15010810 - 15010934
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||| |||||||  ||| |||||||| |||| ||||| |||||||| |||  ||||||||||  ||||||||||    
T  15010810 tgttgaaatttggggcctaactcatccttataaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgat 15010909  T
Q  271 gtaggactt-gggtttttcccaata 294  Q
    || |||||| |||||||||||||||    
T  15010910 gtgggacttggggtttttcccaata 15010934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 5720900 - 5720979
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  5720900 aaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 5720979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 258
Target Start/End: Complemental strand, 35561637 - 35561486
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtc-tgactcattcttacaaaac 206  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| | | |||||| ||||||||||    
T  35561637 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttgggggcctaactcatccttacaaaac 35561538  T
Q  207 cgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 258  Q
    ||  || ||||||||| |||  ||||| ||||||||||||  ||||||||||    
T  35561537 cggcttacaaggtgaggattacctcctctttataaactcttctcaagagtct 35561486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 26122752 - 26122841
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    |||||| |||| |||||| | ||| || ||||| ||||  |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  26122752 actcatccttataaaaccaacttgtaatgtgaggattgcatcctctttataaactctcatcaagagtctcatctatccgatgtgggactt 26122841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 3183900 - 3184002
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || ||||||  |||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||  |||||||||||    
T  3183900 tgttgaaatttggggcctaactcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcctatctatccgat 3183999  T
Q  271 gta 273  Q
    |||    
T  3184000 gta 3184002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 34248186 - 34248085
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  ||||| ||||||| |||    
T  34248186 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtggga 34248087  T
Q  277 ct 278  Q
    ||    
T  34248086 ct 34248085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 15968097 - 15968179
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt--aggacttgggtttttcccaataa 295  Q
    |||||||| |||||||||||| |||||||||| ||||||||||| ||| ||| |||||   |||| |||||||||||||||||    
T  15968097 aaggtgaggattgtctcctttatataaactcttatcaagagtcttatcaatctgatgtgggggacatgggtttttcccaataa 15968179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 18905971 - 18905864
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  18905971 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 18905872  T
Q  271 gtaggact 278  Q
    || |||||    
T  18905871 gtgggact 18905864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 45122381 - 45122303
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||| | |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  45122381 aaggtgaggattgtctc-tctttatatactcttctcaagagtcttatctatcagatgtgggacttgggtttttcccaata 45122303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 294
Target Start/End: Original strand, 4195965 - 4196063
Alignment:
Q  197 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt-gggtttttcccaata 294  Q
    ||||||||||||  ||| |||||||| |||| ||||| || |||||||||  ||||||||||  |||||||||||| || ||| |||||||||||||||    
T  4195965 cttacaaaaccggcttgtaaggtgaggattgcctcctcttgataaactcttctcaagagtcttgtctatccgatgtgggccttggggtttttcccaata 4196063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 25186834 - 25186764
Alignment:
Q  224 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||| | |||||||| | ||||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  25186834 attgtctcctctatataaacttttatcaagagtcttatctatccgatgtgggacttaggttttttccaata 25186764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 8559745 - 8559790
Alignment:
Q  249 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  8559745 tcaagagtcttatctatccgatgtgggacttgggtttttcccaata 8559790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 34248468 - 34248367
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  ||||| || |||| |||    
T  34248468 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccaatgtggga 34248369  T
Q  277 ct 278  Q
    ||    
T  34248368 ct 34248367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 36997281 - 36997196
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 256  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| |||||||||    
T  36997281 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagt 36997196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 3895202 - 3895131
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 286  Q
    |||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||||| |||||| || |||||    
T  3895202 aaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatataggacatgagtttt 3895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 8559852 - 8559910
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||| |||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  8559852 tttatatactcttctcaagagtct-atctatccgatgtgggacttgggtttttcccaata 8559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 15968461 - 15968540
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||  ||||||||| |  ||||||||| ||||||||||| |||||| |||||| |||| ||| ||||||||||||    
T  15968461 aaggtgagggttgtctcctctaaataaactcttatcaagagtctaatctatacgatgtgggacatggatttttcccaata 15968540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 32931516 - 32931409
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| |   |||||||||||    
T  32931516 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatgatatctatccgat 32931417  T
Q  271 gtaggact 278  Q
    || |||||    
T  32931416 gtgggact 32931409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 8056273 - 8056343
Alignment:
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 288  Q
    ||||| |||| ||||| | |||||||||| ||||||||||| |||| |||||||| |||| ||||||||||    
T  8056273 gtgaggattgcctcctctatataaactcttatcaagagtcttatctttccgatgtgggacatgggtttttc 8056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 5496618 - 5496553
Alignment:
Q  229 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| |||||||||| |||||||||||||| |||||  ||||| ||||||| |||||| ||||||    
T  5496618 ctcctctttataaactttcatcaagagtctcgtctatttgatgtgggacttgagttttttccaata 5496553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 15857089 - 15856964
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccg-atttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    ||||| ||||||||  || |||||| |||| ||||||| ||||| |||||||  |||| ||| | ||||||||||||  || ||||||| |||||| |||    
T  15857089 tgttgaaatttgggacctaactcatccttagaaaaccggatttgtaaggtgatgattgcctcatctttataaactcttctcgagagtcttatctattcga 15856990  T
Q  270 tgtaggacttgggtttttcccaataa 295  Q
     || | |||| |||||||||||||||    
T  15856989 cgttgaacttaggtttttcccaataa 15856964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 15857216 - 15857171
Alignment:
Q  249 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  15857216 tcaagagtcttatctatccgatgtgggacttgagtttttcccaata 15857171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 8056482 - 8056598
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||| |||| || |||||||||||||||| || ||   ||  |||| |||||||||| | ||||||| || ||||||||||| ||||||| ||||| |||    
T  8056482 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttatcaagagtcttatctatctgatgtggga 8056581  T
Q  277 cttgggtttttcccaat 293  Q
    | || |||||| |||||    
T  8056582 catgtgttttttccaat 8056598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 43599550 - 43599510
Alignment:
Q  254 agtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  43599550 agtcttatctatccgatgtgggacttgggtttttcccaata 43599510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 3895450 - 3895372
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||| || || | |||||| ||| ||||||||||| |||||||||||||| ||| ||||||||| ||||||    
T  3895450 aaggtgaggattgccttctctatataaattcttatcaagagtcttatctatccgatgta-gacatgggttttttccaata 3895372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 21085137 - 21085244
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || ||||||  ||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  21085137 tgttgaaatttggggcctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 21085236  T
Q  271 gtaggact 278  Q
    || |||||    
T  21085237 gtgggact 21085244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 21653442 - 21653335
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||| | || |||||| ||||||||||||  ||| |||||||||| || ||||| | ||||||||||  |||||||    |||||||||||    
T  21653442 tgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctatataaactcttctcaagagcactatctatccgat 21653343  T
Q  271 gtaggact 278  Q
    || |||||    
T  21653342 gtgggact 21653335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 21653919 - 21653812
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| | |||||||| |  |||||||    |||||||||||    
T  21653919 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctgtataaacttttctcaagagcactatctatccgat 21653820  T
Q  271 gtaggact 278  Q
    || |||||    
T  21653819 gtgggact 21653812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 22277639 - 22277564
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 246  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||    
T  22277639 tgttgaaatttggggattaactcatccttacaaaaccggcttgtaaggtgagtagtgtctcctctttataaactct 22277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 293
Target Start/End: Original strand, 37537123 - 37537206
Alignment:
Q  210 tttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 293  Q
    |||| |||||| | |||||||||| |||| | |||||  |||| ||||| |||||| |||||| ||||||| ||||||||||||    
T  37537123 tttgtaaggtggggattgtctcctctttacatactcttctcaaaagtcttatctattcgatgtgggacttgagtttttcccaat 37537206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 43984305 - 43984412
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| | |||||| | || ||||| |||||||||||| ||||||  ||  ||||| |||||    
T  43984305 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtatggtgaggagtgcctcctctttataaactctgatcaagcttccaatctaaccgat 43984404  T
Q  271 gtaggact 278  Q
    || |||||    
T  43984405 gtgggact 43984412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 30066029 - 30065983
Alignment:
Q  248 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||| ||||||| ||||| ||||||| |||||||||||||    
T  30066029 atcaagagtcttatctatctgatgtgggacttgagtttttcccaata 30065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 23027823 - 23027924
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || ||||||||||| |||||||  ||| |||||||| | || ||||| ||||||| ||||  ||||||||   |||||||| |||| |||    
T  23027823 aatttggggcctaactcattcttaaaaaaccggcttgtaaggtgaggagtgcctcctctttataagctcttctcaagagttctatctatcctatgtggga 23027922  T
Q  277 ct 278  Q
    ||    
T  23027923 ct 23027924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 39125020 - 39124916
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    ||||||||||||||||| |  ||| ||| |||| | || ||||| |||||||||||| ||  ||||||   | ||||| |||| |||| |||||||||||    
T  39125020 actcattcttacaaaactggcttgtaagatgaggagtgcctcctctttataaactcttattgagagtcctgtttatccaatgtgggacctgggtttttcc 39124921  T
Q  290 caata 294  Q
    |||||    
T  39124920 caata 39124916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 109 - 296
Target Start/End: Complemental strand, 9378971 - 9378783
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| |||||||||||||||||| |||||| |||||||||||    
T  9378971 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggtctaactcatccttacaaaacc 9378872  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 296  Q
    |  ||| ||||  || |||| ||||| ||||||||||||  |||||||||| |||||| |||||| |||||||||||||||||||||||    
T  9378871 ggcttgtaaggcaaggattgcctcctctttataaactcttctcaagagtcttatctattcgatgtgggacttgggtttttcccaataaa 9378783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 13310351 - 13310538
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || ||||||||| || | |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  13310351 ctctttgggcttggtgcgtaaacaggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 13310450  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    | ||||  | ||||| | |||||||| ||||||||||||| |||||||||||||||||| || || ||||||||||||||| ||||||    
T  13310451 ggtttgtgaagtgaggagtgtctcctctttataaactctcgtcaagagtctcatctatctgacgtgggacttgggtttttctcaataa 13310538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 23396787 - 23396601
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  23396787 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 23396688  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||| ||| | |||||| |||||  |||||||||| ||||||||| ||| |||||||| ||||||||||||    
T  23396687 ggcttgtaaggtgaggattgcctcatctttatatactcttctcaagagtcttatctatccgttgtgggacttggatttttcccaata 23396601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 40703785 - 40703972
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| |||   | ||||| | ||| |||||||||  | |||||| |||||||| ||    
T  40703785 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagcgttgataccatattgaaatttggggcataactcatccttacaaatcc 40703884  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    || |||  ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||    
T  40703885 gacttgtgaggtgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgagcttttccaaataa 40703972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 6783154 - 6783030
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||    
T  6783154 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccga 6783055  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    |||  ||||||||||||||||||||    
T  6783054 tgtgagacttgggtttttcccaata 6783030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 33855806 - 33855683
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || ||||||||||||||||||| ||   |||||||| | |||||||| |||||||||| | |||| |||||| |||||||||||    
T  33855806 tgttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgat 33855707  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  33855706 gtgggacttgggtttttcccaata 33855683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 145 - 288
Target Start/End: Complemental strand, 31374907 - 31374763
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||| ||||||| | ||||| |||| ||||||| |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||    
T  31374907 ccttgaattcgacaagctctaatatcatgttgaaattcggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaac 31374808  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggtttttc 288  Q
    |||  |||| ||||| |||||||||||||||||||||| ||||||    
T  31374807 tcttctcaatagtcttatctatccgatgtaggacttggatttttc 31374763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 9379089 - 9378992
Alignment:
Q  197 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||| |||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| | |||||||||||||||||||    
T  9379089 cttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtggaacttgggtttttcccaata 9378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 23821665 - 23821788
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||| | ||| ||||| ||||||| ||||| |||||||||| ||||||| ||||| || ||||||||    
T  23821665 tgttgaaatttggggcctaactcatccttacaaaaccaacttgtaaggtaagaattgcctcctctttataaactgtcatcaaaagtcttatttatccgat 23821764  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    ||   |||||||||||||||||||    
T  23821765 gtgaaacttgggtttttcccaata 23821788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 35866636 - 35866751
Alignment:
Q  179 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    ||||||| || |||||| ||||||||||||  ||| ||| |||| |||| | ||| | |||||||||| ||||||||||| ||||||||||||| |||||    
T  35866636 tttggggcctaactcatccttacaaaaccggcttgtaagttgagtattgccccctctatataaactcttatcaagagtcttatctatccgatgtgggact 35866735  T
Q  279 tgggtttttcccaata 294  Q
    ||||||||||||||||    
T  35866736 tgggtttttcccaata 35866751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 145 - 294
Target Start/End: Complemental strand, 16565036 - 16564886
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||||||| ||| ||||| ||||| |||||  || || |||||| |||| ||||||| ||   |||||||| | || ||||| |||||||||    
T  16565036 ccttgaattcgataagctctgataccatgttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaac 16564937  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||| || |||||||| ||||||||||||| |||||||||||||||||||||    
T  16564936 tcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16564886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 145 - 294
Target Start/End: Original strand, 16600626 - 16600776
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||||||| ||| ||||| ||||| |||||  || || |||||| |||| ||||||| ||   |||||||| | || ||||| |||||||||    
T  16600626 ccttgaattcgataagctctgataccatgttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaac 16600725  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||| || |||||||| ||||||||||||| |||||||||||||||||||||    
T  16600726 tcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 296
Target Start/End: Original strand, 39808593 - 39808711
Alignment:
Q  178 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac 277  Q
    |||||||| || |||||| || ||||||| |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||    
T  39808593 atttggggcctaactcatcctcacaaaactggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggac 39808692  T
Q  278 ttgggtttttcccaataaa 296  Q
    |||||||||||||||||||    
T  39808693 ttgggtttttcccaataaa 39808711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 171 - 292
Target Start/End: Original strand, 6813067 - 6813188
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| || |||||||||  |||  || |||| | || ||||| ||||||||||||||||||||||| ||||||||||||    
T  6813067 tgttgaaatttggggcctaactcatcctcacaaaaccggcttgtgagttgaggagtgcctcctctttataaactctcatcaagagtcccatctatccgat 6813166  T
Q  271 gtaggacttgggtttttcccaa 292  Q
    || ||||||| |||||||||||    
T  6813167 gtgggacttgtgtttttcccaa 6813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 200 - 296
Target Start/End: Complemental strand, 6782912 - 6782816
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 296  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  6782912 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaataaa 6782816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 6751743 - 6751822
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    ||||||| | || ||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  6751743 aggtgaggagtgcctcctctttgtaaactctcatcaagaatctcatctatccgatgtgggacttgggtttttcccaataa 6751822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 16565169 - 16565090
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  16565169 aaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16565090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 16600493 - 16600572
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  16600493 aaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 31357708 - 31357787
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  31357708 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 31357787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 6751539 - 6751617
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||| | || ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  6751539 aggtgaggagtgcctcctctttgtaaactctcatcaagagtctcatctatccgatttgggacttgggtttttcccaata 6751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 29252662 - 29252568
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||| || |||||||||||||||||||||    
T  29252662 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgacgtgggacttgggtttttcccaata 29252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 1661178 - 1661287
Alignment:
Q  169 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 268  Q
    ||||||| ||||||||| || |||||||||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||| | |||||||||    
T  1661178 cctgttgaaatttggggcctaactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttttatctatccg 1661277  T
Q  269 atgtaggact 278  Q
    |||| |||||    
T  1661278 atgtgggact 1661287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 40703647 - 40703764
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||| |||| || |||||| ||||||||||||  |||  ||||||| | |||||||| |||||||| |||||||||||||||||| ||| |||||| |||    
T  40703647 aattaggggcctaactcatccttacaaaaccggcttgtgaggtgaggagtgtctcctctttataaagtctcatcaagagtctcatttattcgatgtggga 40703746  T
Q  277 cttgggtttttcccaata 294  Q
    ||||| |||||| |||||    
T  40703747 cttggttttttctcaata 40703764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 33834021 - 33833941
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||||||||| |||||||    
T  33834021 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttttccaataa 33833941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 119 - 294
Target Start/End: Original strand, 38948350 - 38948525
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 217  Q
    |||||| ||||||| |||||||||| |||| ||||||| ||| ||| ||||| |  || |||| | ||||| |||||| |||| |||| | |||  ||||    
T  38948350 ttggtgtgtgaataggtttaggcagcccttgaattcgacaagctctgataccataatgaaattggaggtctaactcatcctta-aaaatcaattcacaag 38948448  T
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||||||| | |||||||||| || |||||||| |||| |||||||| |||| ||  ||||||||||||    
T  38948449 gtgagaattgtctcctctatataaactcttataaagagtcttatctttccgatgtgggacatgattttttcccaata 38948525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 6813211 - 6813395
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||  | || ||||||||    
T  6813211 ctctttgggcttggtgcgtgaatatgt--aggtggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaacttgtcctcacaaaacc 6813308  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  |||  ||||||| | || ||||| ||||||||||||||||||||||| |||||||| ||||  ||||||||| |||||||||||    
T  6813309 ggcttgtgaggtgaggagtgcctcctctttataaactctcatcaagagtcccatctatctgatgcgggacttggggttttcccaata 6813395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 22841123 - 22841044
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||||| | |||||||||| | ||||||||| |||||||||||||||| | ||||||||||||||||    
T  22841123 aaggtgaggattgtctcctctatataaactcttaccaagagtcttatctatccgatgtagggcatgggtttttcccaata 22841044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 5775939 - 5775873
Alignment:
Q  229 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||    
T  5775939 ctcctctttataaactctcattaagagtctcatctatgcgatgtgggacttgagtttttcccaataa 5775873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 198 - 294
Target Start/End: Complemental strand, 2179743 - 2179646
Alignment:
Q  198 ttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca-tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||| | |||| |||||||| |||||||||| ||||||||||||   |||||||||| ||||||||||||| |||||||  ||||||||||||    
T  2179743 ttacaaaactggtttgtaaggtgaggattgtctcctctttataaactctttctcaagagtcttatctatccgatgtgggacttgaatttttcccaata 2179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 48114053 - 48113989
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  48114053 tcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggttattcccaata 48113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 145 - 294
Target Start/End: Complemental strand, 258571 - 258423
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || ||||||  | ||||||||   |||  | ||||| | || ||||| || || |||    
T  258571 ccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatcatcacaaaaccagcttgtgaagtgaggagtgcctcctcttcatcaac 258472  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  258471 tctcatcaagagtctcatctatccgatg--ggacttgggtttttcccaata 258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 4258033 - 4258112
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| | || ||||| || ||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||    
T  4258033 aaggtgaggagtgcctcctattgataaactcttatcaagagtcttatctatccgatgtgagacttgggtttttcccaata 4258112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 145 - 287
Target Start/End: Complemental strand, 8682026 - 8681883
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||| || || |||||||||||||||||||| ||  | | |||  |||| ||| | |||||||||    
T  8682026 ccttgaattcgacaagctctgataccatgttgaaatttgaggcctaactcattcttacaaaaccgacttatatgttgaagattgcctcttctttataaac 8681927  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    ||| ||||||||||| ||||||| ||||| |||||||| |||||    
T  8681926 tcttatcaagagtcttatctatctgatgtgggacttggattttt 8681883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 33834226 - 33834147
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||| ||||| |||| ||| ||||||||||||    
T  33834226 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggatttttcccaata 33834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 290
Target Start/End: Complemental strand, 43566113 - 43565960
Alignment:
Q  137 taggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctccttt 235  Q
    ||||||| | || ||||||| ||| ||||||||| ||||| |||||||||||| || ||||||||||||| ||  ||  |||||||| | |||| |||||    
T  43566113 taggcagcctttgaattcgacaagctctaataccatgttgaaatttggggtctaacccattcttacaaaatcggcttataaggtgaggagtgtcaccttt 43566014  T
Q  236 ttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 290  Q
    | ||||||||||||||| |||||  | |||||||| | | ||||| |||||||||    
T  43566013 t-ataaactctcatcaaaagtcttgtttatccgatatggtacttgagtttttccc 43565960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 23390639 - 23390582
Alignment:
Q  237 tataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  23390639 tataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 23390582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 33855541 - 33855473
Alignment:
Q  226 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||||| | |||| |||||| ||||||||||| | |||||||||||||||||||||    
T  33855541 tgtctcctctttataaactattatcacgagtcttatctatccgatatgggacttgggtttttcccaata 33855473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 36621130 - 36621019
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||||||| |||  ||||| |||||||||||| ||||  || |||| | ||  |||| |||||||| ||||||||||||||||||| |||||||||| ||    
T  36621130 aatttgggatctatctcatccttacaaaaccggtttgtgagatgaggagtgcatcctctttataaaatctcatcaagagtctcatc-atccgatgtaaga 36621032  T
Q  277 cttgggtttttcc 289  Q
    |||| ||||||||    
T  36621031 cttgagtttttcc 36621019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 43366467 - 43366399
Alignment:
Q  226 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| ||||||||||||||||||||||||| || || |||||| ||| |||| ||||||||||||    
T  43366467 tgtctcctctttataaactctcatcaagagtctcgtcaattcgatgtgggatttggatttttcccaata 43366399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 4258261 - 4258316
Alignment:
Q  239 taaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  4258261 taaactcttatcaagagtcttatctatccgatgtgggacttgagtttttcccaata 4258316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 10903314 - 10903389
Alignment:
Q  219 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| || |||||||||||||    
T  10903314 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 10903389  T

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Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 10903521 - 10903596
Alignment:
Q  219 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| || |||||||||||||    
T  10903521 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 10903596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 23396929 - 23396814
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| ||| |||  |||| ||||| |||||| ||||| ||||||||||| ||||||  | |    
T  23396929 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaagttgatgattgcctcctctttatatactcttatcaagagtcttatctatatgtt 23396830  T
Q  271 gtaggacttgggtttt 286  Q
    || |||||||| ||||    
T  23396829 gtgggacttggatttt 23396814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 5266461 - 5266351
Alignment:
Q  184 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggt 283  Q
    ||||| |||||| |||||||||||| ||   ||| |||| ||||  |||| | ||||| |||| ||||||||||| ||||||| ||||| |||| |||||    
T  5266461 ggtctaactcatccttacaaaaccggttcataagttgaggattggatcctctatataatctcttatcaagagtcttatctatctgatgtgggacatgggt 5266362  T
Q  284 ttttcccaata 294  Q
    |||||||||||    
T  5266361 ttttcccaata 5266351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 47856038 - 47856095
Alignment:
Q  229 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 286  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||| ||| |||||||||    
T  47856038 ctcctctttataaactcttatcaagagtcttatctatccgatgtgggatttgggtttt 47856095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 1663593 - 1663701
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccga 269  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||||  ||||||||   ||||||||||    
T  1663593 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttttataaactcttctcaagagtgctatctatccga 1663692  T
Q  270 tgtaggact 278  Q
    ||| |||||    
T  1663693 tgtgggact 1663701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 2232211 - 2232087
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||| |||| | |||||  ||||||||| ||  |||  ||||||| |||| ||||| | |||||||||| ||||||||| | |||||||||||    
T  2232211 tgttgaaatttagggtataactcaaccttacaaaatcggcttgtgaggtgaggattgcctcctctatataaactcttatcaagagttttatctatccgat 2232112  T
Q  271 gtaggacttg-ggtttttcccaata 294  Q
    | |||||||| ||||||| ||||||    
T  2232111 gcaggacttgaggttttttccaata 2232087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 29780256 - 29780176
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 257  Q
    ||||||||| || |||||| |||| |||||||| ||| |||||||| | |||||||| ||||||||||||  |||||||||    
T  29780256 aatttggggcctaactcatccttataaaaccgacttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtc 29780176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 36237897 - 36237793
Alignment:
Q  191 ctcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 290  Q
    ||||| ||||||||||||  ||| |||| ||| | || ||||| |||||||||||| ||||||||||  || ||||| |||| |||||||||| |||||     
T  36237897 ctcatccttacaaaaccggcttgtaaggagaggagtgcctcctctttataaactcttatcaagagtcctatgtatccaatgtgggacttgggtgtttccg 36237798  T
Q  291 aataa 295  Q
    |||||    
T  36237797 aataa 36237793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 37272053 - 37272141
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  ||||| ||||||| |||||    
T  37272053 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggact 37272141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 7135238 - 7135333
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    ||||||||| || ||||||  |||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||||    
T  7135238 aatttggggcctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgt 7135333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 23821540 - 23821583
Alignment:
Q  251 aagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  23821540 aagagtctcatctatcctatgtgggacttgggtttttcccaata 23821583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 303
Target Start/End: Original strand, 6214302 - 6214356
Alignment:
Q  249 tcaagagtctcatctatccgatgtaggacttgggtttttcccaataaagaatcct 303  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||  |||||||    
T  6214302 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaatatcgaatcct 6214356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 29645886 - 29645829
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    |||||||| |||| ||||||| |||||||||  ||||||||||| |||||||||||||    
T  29645886 aaggtgaggattgcctcctttatataaactcatatcaagagtcttatctatccgatgt 29645829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 39808460 - 39808553
Alignment:
Q  178 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 271  Q
    |||||||| || |||||| || |||||||||  ||  |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||    
T  39808460 atttggggcctaactcatcctcacaaaaccggcttttaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatg 39808553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 43384279 - 43384376
Alignment:
Q  181 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    ||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| ||  ||||||||||||| |||||    
T  43384279 tggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggact 43384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 21557067 - 21557007
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |||||||||||| |||||||||   ||||||||||||| ||||||| |||||| |||||||    
T  21557067 tttataaactcttatcaagagttctatctatccgatgtgggacttgagttttttccaataa 21557007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 27585352 - 27585264
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| ||||||||||||  ||| | |||||| | || ||||||||||||||||||  |||||| ||  ||||||||||||| |||||    
T  27585352 actcatccttacaaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatctatccgatgtgggact 27585264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 28910148 - 28910072
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 246  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  28910148 ctgttgaaatttgggggctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 28910072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 40137704 - 40137808
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| ||||||||||||  | | |||||||| | |||||| | |||||||||||| || |||||||   ||||||| |||| || |||||||||| ||    
T  40137704 actcatccttacaaaaccggctcgtaaggtgaggagtgtctcttctttataaactcttattaagagtcctgtctatccaatgtggggcttgggttttgcc 40137803  T
Q  290 caata 294  Q
    |||||    
T  40137804 caata 40137808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 12578449 - 12578556
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||| ||| ||| |||| ||| | || ||||| ||| |||||||| ||||||  ||  ||||| |||||    
T  12578449 tgttgaaatttggggtctaactcatccttacaaaatcgaattgtaaggcgaggagtgcctcctctttctaaactctgatcaagcttcctatctaaccgat 12578548  T
Q  271 gtaggact 278  Q
    || |||||    
T  12578549 gtgggact 12578556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 24426858 - 24426752
Alignment:
Q  180 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    ||||||||| ||||| ||||| ||||| | |||  |||||||| | | ||| || |||||||||||| ||||||||| | |||||||||| || ||||||    
T  24426858 ttggggtctaactcactcttataaaactggtttataaggtgaggaatatcttctctttataaactcttatcaagagt-ttatctatccgacgtgggactt 24426760  T
Q  280 gggttttt 287  Q
     |||||||    
T  24426759 tggttttt 24426752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 29646135 - 29646056
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||| ||||| | |||||||||  ||||||||||| |||||||| |||| |||| ||  ||||||||||||    
T  29646135 aaggtgaggattgcctcctctatataaactcctatcaagagtcttatctatccaatgtgggacatgaatttttcccaata 29646056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 43288373 - 43288278
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    ||||||||| || |||||  ||||||||||||  ||| ||| |||| | || ||||| |||||||||||| ||||||||||  ||||| |||||||    
T  43288373 aatttggggcctaactcacccttacaaaaccggattgtaagatgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgt 43288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 43288641 - 43288546
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    ||||||||| || ||| || ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||| ||| | |||||||    
T  43288641 aatttggggcctaactaatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagagtcttatcaaaccgatgt 43288546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 30768488 - 30768410
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||| || ||||||| | |||||| | | ||||||||||| ||||||||||||| |||| || |||||||| ||||    
T  30768488 aggtgaggatcgtctcctctatataaattattatcaagagtcttatctatccgatgtgggacatgagtttttcctaata 30768410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 34748880 - 34748786
Alignment:
Q  184 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    ||||| |||||| ||||||||||||  ||| | |||||| | || ||||| ||||||||||||  |||||| ||  ||||||||||||| |||||    
T  34748880 ggtctaactcatccttacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggact 34748786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 257262 - 257363
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| ||||||||||||  | | |||||||| | || ||||| ||||||||||||  |||||| |   ||||||||||||| |||    
T  257262 aatttggggcctaactcatccttacaaaaccggctagtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatctatccgatgtggga 257361  T
Q  277 ct 278  Q
    ||    
T  257362 ct 257363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 14691162 - 14691081
Alignment:
Q  196 tcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac 277  Q
    ||||||||||| |  ||| |||||||| | |||||||| |||||||||||| |||||| |||  ||||| ||||||| ||||    
T  14691162 tcttacaaaactggcttgtaaggtgaggagtgtctcctctttataaactcttatcaagcgtcctatctaaccgatgtgggac 14691081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 40703406 - 40703479
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc 250  Q
    ||||||||| || |||||| ||||||||||||  |||  ||||||| | || ||||| ||||||||||||||||    
T  40703406 aatttggggcctaactcatccttacaaaaccggcttgtgaggtgaggagtgcctcctctttataaactctcatc 40703479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 12518165 - 12518241
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 253  Q
    ||||||||| || |||||| ||||||||||||| ||| |||| ||| | || | ||| |||||||||||| ||||||    
T  12518165 aatttggggcctaactcatccttacaaaaccgaattgtaaggcgaggagtgccccctctttataaactctgatcaag 12518241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 34590644 - 34590556
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 258  Q
    |||||| |||||||||  | |||||| |||||||||||| ||   |||||||| | || ||||| |||||||||||| || ||||||||    
T  34590644 ctgttgaaatttggggcttaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatgaagagtct 34590556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 36092599 - 36092695
Alignment:
Q  182 ggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    ||||||| |||||| |||||||||||   ||| |||||||| | || ||||| | ||||||||||  |||||| ||  ||||||||||||| |||||    
T  36092599 ggggtctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctctataaactcttctcaagaatcctatctatccgatgtgggact 36092695  T

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Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 270
Target Start/End: Original strand, 43167881 - 43167981
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| |||||||||  | |||||| ||||||||||||  |   |||||||| |||| ||||| ||||||||||||  ||||||||   ||||||||||    
T  43167881 ctgttgaaatttggggcttaactcatccttacaaaaccggctcataaggtgaggattgcctcctctttataaactcttctcaagagtgctatctatccga 43167980  T
Q  270 t 270  Q
    |    
T  43167981 t 43167981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 43383954 - 43384042
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| |||||||||||| |||| |||| ||| | || ||||| ||||||||||||   ||||| ||  ||||||||||||| |||||    
T  43383954 actcatccttacaaaaccggtttgtaaggggagtagtgcctcctctttataaactctttgcaagactcctatctatccgatgtgggact 43384042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 48116291 - 48116367
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 253  Q
    ||||||| | || |||||| ||||||||||||  ||| |||||||| | ||| |||| |||||||||||| ||||||    
T  48116291 aatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtgtcctctttataaactctgatcaag 48116367  T

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Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 49040624 - 49040580
Alignment:
Q  228 tctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    |||||| | |||||||||| ||||||||||| |||||||||||||    
T  49040624 tctcctctatataaactcttatcaagagtcttatctatccgatgt 49040580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 119 - 298
Target Start/End: Original strand, 18914304 - 18914484
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 217  Q
    ||||||||||||||||||||||| | |||| ||||||| ||| ||  ||||| ||||| ||||||||| || ||||||||||||||||||   ||| |||    
T  18914304 ttggtgcgtgaataagtttaggcggcccttgaattcgacaagctccgataccatgttgaaatttggggcctaactcattcttacaaaaccagcttgtaag 18914403  T
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaaga 298  Q
    ||||| ||||||||||||||||||||| |  ||||||||||   ||||||||||| |||||||||||||||||||||||||    
T  18914404 gtgaggattgtctcctttttataaacttttctcaagagtcttgactatccgatgtgggacttgggtttttcccaataaaga 18914484  T

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Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 109 - 295
Target Start/End: Complemental strand, 13413761 - 13413575
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| ||||||||||||||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  13413761 ctctttgggcttggtgcgtgaataggtttaggcagtccttgaattcga-aagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 13413663  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||  ||||| ||||||||||||||||||||||    
T  13413662 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatttgatgtgggacttgggtttttcccaataa 13413575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 38376909 - 38376723
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || || |||| |||||| |||||||| | |||| | ||||| ||| ||| ||||| ||||||||||||||| || |||||| |||||||||||    
T  38376909 ctctttgggcttagtgcatgaataggtttaggcggcccttgacttcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaacc 38376810  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  38376809 ggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 38376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 20720476 - 20720663
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || ||||||||||||||||||||||| | |||| ||||||||||| ||| ||||| ||||  |||||||||||| |||||| |||||||||||    
T  20720476 ctctttgggcttggtgcgtgaataagtttaggcggcccttgaattcgataagctctgataccatgttaaaatttggggtctaactcatccttacaaaacc 20720575  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |  ||| || ||||| | || |||||||||| ||||||| ||||||| ||| ||||||| ||||| ||||||| ||||||||||||||    
T  20720576 ggcttgtaaagtgaggagtgcctcctttttacaaactcttatcaagaatcttatctatctgatgtgggacttgagtttttcccaataa 20720663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 119 - 288
Target Start/End: Original strand, 40168977 - 40169147
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 217  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||  ||| |||    
T  40168977 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 40169076  T
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 288  Q
    |||||||||| ||||| |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||    
T  40169077 gtgagaattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttc 40169147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 43490389 - 43490575
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||| | ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  43490389 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcaacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 43490488  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| ||||||| || ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  43490489 ggcttggaaggtgagtattgtcttctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 43490575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 292
Target Start/End: Original strand, 3015549 - 3015731
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| ||||| ||| || |||||  |||||||||||    
T  3015549 ctctttgggcttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaatttagggcctaactcaaccttacaaaacc 3015646  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 292  Q
    |  ||||||||||||  ||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3015647 ggcttgcaaggtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaa 3015731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 18914149 - 18914273
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||||||||||||||| | ||| |||||||| ||||||||||||||||||||| |  ||||||||||   ||||||||    
T  18914149 ctgttgaaatttggggcctaactcattcttacaaaaccaacttgtaaggtgaggattgtctcctttttataaacttttctcaagagtcttgactatccga 18914248  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||||||||||||||||    
T  18914249 tgtgggacttgggtttttcccaata 18914273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 109 - 287
Target Start/End: Complemental strand, 34457274 - 34457095
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  34457274 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 34457175  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    |  ||| |||||||| ||||  |||| ||||||||||||  ||||||||||  |||||||||| | ||||||||||||||    
T  34457174 ggcttgtaaggtgaggattgcatcctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggttttt 34457095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 28358030 - 28358147
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| |||||||||| ||||||||||||  ||||||||||  |||||||||||| |||    
T  28358030 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtggga 28358129  T
Q  277 cttgggtttttcccaata 294  Q
    ||||||||||||||||||    
T  28358130 cttgggtttttcccaata 28358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 35526976 - 35527092
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||    
T  35526976 ctgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccga 35527075  T
Q  270 tgtaggacttgggtttt 286  Q
    ||| |||||||||||||    
T  35527076 tgtgggacttgggtttt 35527092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 3015406 - 3015529
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||  ||||||||||||  |||||| |||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  3015406 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgcaatgtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgat 3015505  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || || ||||||||||||||||||    
T  3015506 gtggggcttgggtttttcccaata 3015529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 34457418 - 34457295
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||||||||  |||| ||||||||||||  ||||||||||  ||||||||||    
T  34457418 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcatcctctttataaactcttctcaagagtcttgtctatccgat 34457319  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  34457318 gtgggacttgggtttttcccaata 34457295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 3763021 - 3762896
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||  |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  3763021 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaactcttctcaagagtcttatctatccgat 3762922  T
Q  271 gtaggacttgggtttttcccaataaa 296  Q
    || |||| ||||||||||||||||||    
T  3762921 gtgggacatgggtttttcccaataaa 3762896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 48237 - 48422
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  48237 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 48336  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |  ||| |||||||| |||| ||||| |||||||||| |  ||||||||||  |||||   |||| ||||||||||||||||||||||    
T  48337 ggcttgtaaggtgaggattgcctcctctttataaacttttctcaagagtcttgtctat--aatgtgggacttgggtttttcccaataa 48422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 24125177 - 24125054
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| |||  ||||| |||||| |||||  ||||||||||  | ||||||||    
T  24125177 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtttatccgat 24125078  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    ||||||||||||||||||||||||    
T  24125077 gtaggacttgggtttttcccaata 24125054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 35527262 - 35527388
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc-aagagtctcatctatccg 268  Q
    |||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||| ||||||||  || |||||||| | |||||||    
T  35527262 ctgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaactcttctctaagagtcttagctatccg 35527361  T
Q  269 atgtaggacttgggtttttcccaataa 295  Q
    |||| ||||||||||||||||||||||    
T  35527362 atgtgggacttgggtttttcccaataa 35527388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 48099 - 48216
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||    
T  48099 aattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtggga 48198  T
Q  277 cttgggtttttcccaata 294  Q
    ||||||||||||||||||    
T  48199 cttgggtttttcccaata 48216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 2908557 - 2908674
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||||||| ||| |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||| |  ||||||||||  |||||||||||| |||    
T  2908557 aatttgggatctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaagagtcttgtctatccgatgtggga 2908656  T
Q  277 cttgggtttttcccaata 294  Q
    ||||||||||||||||||    
T  2908657 cttgggtttttcccaata 2908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 199 - 294
Target Start/End: Original strand, 43490273 - 43490368
Alignment:
Q  199 tacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||  ||| |||||||  |||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  43490273 tacaaaaccggcttgtaaggtgaagattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 43490368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 294
Target Start/End: Original strand, 2908705 - 2908881
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 217  Q
    |||||| ||||||| |||||||    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||  ||| |||    
T  2908705 ttggtgtgtgaataggtttaggtgacccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 2908804  T
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| |||| ||||| |||||||||| |  |||| |||||  |||||| ||||| |||||||| ||||||||||||    
T  2908805 gtgaggattgcctcctctttataaactattctcaaaagtcttgtctatctgatgtgggacttggatttttcccaata 2908881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 28156211 - 28156028
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagt---ttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaa 204  Q
    |||||| || |||||||||||||| ||   |||||| | |||| ||||||| ||||||| ||| | ||||| ||||||||| || | |||| ||||||||    
T  28156211 ctctttgggcttggtgcgtgaataggtggtttaggcggcccttgaattcgacaagttctgatatcatgttgaaatttggggcctaattcatccttacaaa 28156112  T
Q  205 accgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||  ||| |||||||| |||| ||||| ||||||||||||      ||||||  |||||||||||| |||||||||||||||||||||    
T  28156111 accggcttgtaaggtgaggattgcctcctctttataaactct------gagtcttgtctatccgatgtgggacttgggtttttcccaata 28156028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 39268089 - 39268009
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  39268089 aaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 39268009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 15287168 - 15287045
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||| |||||| ||||||  |||||||||||  ||| |||||||| |||| ||||| || ||| || ||  |||||||||| |||||||||||    
T  15287168 tgttgaaattttgggtctaactcatcattacaaaaccggcttgtaaggtgaggattgcctcctcttaatatacccttctcaagagtcttatctatccgat 15287069  T
Q  271 gtaggacttgggtttttcccaata 294  Q
     |||||||||||||||||||||||    
T  15287068 ataggacttgggtttttcccaata 15287045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 18107532 - 18107590
Alignment:
Q  236 ttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18107532 ttataaactctcatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 18107590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 30330745 - 30330643
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| |||||||||||| |||| |||||||| |||| ||||| | |||||||||| ||  ||||||| ||||||||||||| |||||||| |||||||    
T  30330745 actcatccttacaaaaccggtttgtaaggtgaggattgcctcctctatataaactctaattcagagtcttatctatccgatgtgggacttggatttttcc 30330646  T
Q  290 caa 292  Q
    |||    
T  30330645 caa 30330643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 36878397 - 36878318
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||| ||||||| ||||| |||||| ||||||||||||||    
T  36878397 aaggtgaggattgtctcctgtttataaactcttatcaaaagtcttatctatctgatgtgggactttggtttttcccaata 36878318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 38131879 - 38131772
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||  |||||||||  |||||||||||    
T  38131879 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactcttctcaagagtcctatctatccgat 38131780  T
Q  271 gtaggact 278  Q
    || |||||    
T  38131779 gtgggact 38131772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 18107939 - 18107825
Alignment:
Q  180 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    ||||||||| | |||| |||||||||||| |||  |||||||| | || ||||| |||||||| ||| ||||||||||| ||| || |||||| ||| ||    
T  18107939 ttggggtctaattcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaattcttatcaagagtcttatcgattcgatgtgggaatt 18107840  T
Q  280 gggtttttcccaata 294  Q
    |||||||||||||||    
T  18107839 gggtttttcccaata 18107825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 32501271 - 32501205
Alignment:
Q  226 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 292  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||    
T  32501271 tgtctcctttttacaaactcttatcaagagtcttatctatccgatgtgggacttggatttttcccaa 32501205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 11632548 - 11632423
Alignment:
Q  169 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 268  Q
    ||||||| ||||||||| |  |||||| ||||||||||||  ||  |||||||| |||| ||| | ||||||||||||  ||||||||||  ||||||||    
T  11632548 cctgttgaaatttggggcccaactcatccttacaaaaccggcttataaggtgaggattgcctcatctttataaactcttctcaagagtcttgtctatccg 11632449  T
Q  269 atgtaggacttgggtttttcccaata 294  Q
    |||| |||||||| ||||| ||||||    
T  11632448 atgtgggacttggattttttccaata 11632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 37656731 - 37656844
Alignment:
Q  181 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttg 280  Q
    ||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||||  ||||||    
T  37656731 tggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttg 37656830  T
Q  281 ggtttttcccaata 294  Q
     |||||| ||||||    
T  37656831 agttttttccaata 37656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 37781843 - 37781956
Alignment:
Q  181 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttg 280  Q
    ||||| || |||||| |||||||||||   ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||||  ||||||    
T  37781843 tggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttg 37781942  T
Q  281 ggtttttcccaata 294  Q
     |||||||||||||    
T  37781943 agtttttcccaata 37781956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 395463 - 395359
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    ||||||||||||||||||||  || ||||| || | || ||||| |||||||||||| ||||||| ||  |||||||| |||| |||||||||| |||||    
T  395463 actcattcttacaaaaccgacatgtaaggttaggagtgcctcctatttataaactcttatcaagaatcctatctatccaatgtgggacttgggtctttcc 395364  T
Q  290 caata 294  Q
    |||||    
T  395363 caata 395359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 39268322 - 39268218
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| |||| ||||||| ||   |||||||| | || ||||  |||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||    
T  39268322 actcatccttaaaaaaccggttcataaggtgaggagtgcctccaatttataaactcttatcaagagttttatctatccgatgtgggacttgggtttttcc 39268223  T
Q  290 caata 294  Q
    |||||    
T  39268222 caata 39268218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 145 - 294
Target Start/End: Original strand, 36307885 - 36308034
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||| ||  | |||||| |||||||| |||  |||||||||||| |||| ||||| |||||||||    
T  36307885 ccttgaattcgacaagctctgataccatgttgaaatttgaggcttaactcatccttacaaatccggcttgcaaggtgaggattgactcctctttataaac 36307984  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||  |||||||||| ||||||||||||| | |||||  ||||| ||||||    
T  36307985 tct-ttcaagagtcttatctatccgatgtggaacttgaattttttccaata 36308034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 294
Target Start/End: Original strand, 22732752 - 22732849
Alignment:
Q  197 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||||| ||   ||||||| | ||||| || ||||||||||||||||| ||||||||||||||||||||  || |||| |||||| |||||    
T  22732752 cttacaaaaccgacttttgaggtgaggagtgtcttctctttataaactctcatcaggagtctcatctatccgatgtgagatttggatttttctcaata 22732849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 13844129 - 13844021
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||| ||| || |||||| |||||||||||| |||| |||||||||| || ||||| ||||||||||||  ||||||||   ||||||| ||    
T  13844129 ctgttgaaatttagggcctaactcatccttacaaaaccgttttgtaaggtgagaagtgcctcctctttataaactcttctcaagagtactatctatcaga 13844030  T
Q  270 tgtaggact 278  Q
    ||| |||||    
T  13844029 tgtgggact 13844021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 28156354 - 28156231
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| |||||||| ||| |||||| |||||| ||||   ||| |||||||| |||| ||||| ||||||||||||  |||||||| |   | ||||||    
T  28156354 ctgttgaaatttgggttctaactcatccttacataaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagt-tttgccatccga 28156256  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||||||||||||||||    
T  28156255 tgtgggacttgggtttttcccaata 28156231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 10668431 - 10668352
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| | |||||||| ||| |||||||| ||||||||| | ||||||  ||||| |||||||||||||||||||||    
T  10668431 aaggtgaggagtgtctcctctttgtaaactcttatcaagagttttatctatttgatgtgggacttgggtttttcccaata 10668352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 17135589 - 17135519
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 286  Q
    ||||||| | |||||||| |||||||||||| ||||||||||| || |||||||||| ||||||| |||||    
T  17135589 aggtgaggagtgtctcctctttataaactcttatcaagagtcttatttatccgatgtgggacttgagtttt 17135519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 18873227 - 18873305
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 293  Q
    |||||||| |||| ||||| | |||||||||| ||||| ||||| ||||||||||||| |||| |||| ||||||||||    
T  18873227 aaggtgaggattgcctcctctatataaactcttatcaatagtcttatctatccgatgtgggacatgggcttttcccaat 18873305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 4563724 - 4563805
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 296  Q
    |||||||| |||||||||| | | |||||||| ||||| ||||| |||||||||||||  ||| || |||||||||||||||    
T  4563724 aaggtgaggattgtctcctctatgtaaactcttatcaaaagtcttatctatccgatgtgagacatgagtttttcccaataaa 4563805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 17130036 - 17130096
Alignment:
Q  229 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| ||||||||||||||||||||||||     ||||||||| |||||||||||||||||||||    
T  17130036 ctcctatttataaactctcatcaagagtct-----atccgatgtgggacttgggtttttcccaata 17130096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 29432521 - 29432420
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||||| || || |||||| ||||||||||||  ||| |||||||||| || ||||| |||||||||||| ||||||||||  ||||| || |||| |||    
T  29432521 aatttgtggcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaactcttatcaagagtcctatctaaccaatgtggga 29432422  T
Q  277 ct 278  Q
    ||    
T  29432421 ct 29432420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 37995629 - 37995730
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||    
T  37995629 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtgctatctatccgatgtggga 37995728  T
Q  277 ct 278  Q
    ||    
T  37995729 ct 37995730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 35527114 - 35527202
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaac 206  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||||||||||||| || || ||| ||||||||||    
T  35527114 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaacacatccttacaaaac 35527202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 873685 - 873792
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| | ||||||||||  |||||||||  |||||||||||    
T  873685 tgttgaaatttggggcctaactcatccttacaaaacctgcttgtaaggtgaggaatgcctcctctctataaactcttctcaagagtcctatctatccgat 873784  T
Q  271 gtaggact 278  Q
    || |||||    
T  873785 gtgggact 873792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 1028082 - 1028189
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || ||||||  | ||||||||| |||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  1028082 tgttgaaatttggggcctaactcatcgtcacaaaaccggtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 1028181  T
Q  271 gtaggact 278  Q
    || |||||    
T  1028182 gtgggact 1028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 5127946 - 5128025
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||  ||||||||||||||||||  ||||||| ||  |||||||||||||| |||||| ||||| ||||||    
T  5127946 aaggtgaggattacctcctttttataaactcttctcaagagccttgtctatccgatgtagaacttggattttttccaata 5128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 2716652 - 2716538
Alignment:
Q  180 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    |||||| || |||||| ||||||||||||  ||  |||||||| | || |||||  ||||||||||| ||||||||||  || ||||| || | ||||||    
T  2716652 ttggggcctaactcatccttacaaaaccggcttataaggtgaggagtgcctcctccttataaactcttatcaagagtcatatttatccaatctgggactt 2716553  T
Q  280 gggtttttcccaata 294  Q
    |||| ||||||||||    
T  2716552 gggtatttcccaata 2716538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 4296654 - 4296779
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctc--atctatccg 268  Q
    ||||| |||||  ||||| |||||| ||||| |||| || ||| |||||||| |||| ||||| |||||| |||||  |||||||||||  ||||||||     
T  4296654 tgttgaaattttaggtctaactcatccttaccaaactgacttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcttatctatcca 4296753  T
Q  269 atgtaggacttgggtttttcccaata 294  Q
    | ||  ||||||||||||| ||||||    
T  4296754 aggtgagacttgggttttttccaata 4296779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 13413823 - 13413782
Alignment:
Q  253 gagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  13413823 gagtcttatctatccgatgtgggacttgggtttttcccaata 13413782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 29008121 - 29008064
Alignment:
Q  237 tataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||  ||||||||||| ||||||||||||| | || ||||||||||||||||    
T  29008121 tataaactcctatcaagagtcttatctatccgatgtggaacatgggtttttcccaata 29008064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 40168848 - 40168949
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| ||| |||| |||| ||||| |||||| |||||  |||||||||| ||||||| |||    
T  40168848 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaagatgaggattgcctcctctttatatactcttctcaagagtcttatctatctgat 40168947  T
Q  271 gt 272  Q
    ||    
T  40168948 gt 40168949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 22196561 - 22196649
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| ||||||||||||  ||| | |||||  | |||||||| ||||||||||||  |||||||||  ||||||||||||| |||||    
T  22196561 actcatccttacaaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatctatccgatgtgggact 22196649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 24994185 - 24994109
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 246  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  24994185 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactct 24994109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 35527199 - 35527247
Alignment:
Q  240 aaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 288  Q
    |||||||  |||||||||| ||||||||||||| |||||||||||||||    
T  35527199 aaactcttctcaagagtcttatctatccgatgtgggacttgggtttttc 35527247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 38663356 - 38663276
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 257  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||  | || ||||| |||||||||||| ||||||||||    
T  38663356 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtc 38663276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 13843812 - 13843705
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |  | ||||| ||||||||||||  ||||||||   ||||||| |||    
T  13843812 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaactcttctcaagagtactatctatctgat 13843713  T
Q  271 gtaggact 278  Q
    || |||||    
T  13843712 gtgggact 13843705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 253
Target Start/End: Original strand, 12965235 - 12965317
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 253  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | ||  |||| |||||||||||| ||||||    
T  12965235 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactctgatcaag 12965317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 15286963 - 15286845
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctccttttta-taaactctcatcaagagtctcatctatccgatgtagg 275  Q
    |||||||||||| | |||| |||||||||||   ||| || ||||| ||||  |||| || | || |||||  |||||||||| |||||||||||||  |    
T  15286963 aatttggggtctaattcatccttacaaaaccagcttgtaaagtgaggattgcatcctcttaaatatactcttctcaagagtcttatctatccgatgtgag 15286864  T
Q  276 acttgggtttttcccaata 294  Q
    |||||| ||||||||||||    
T  15286863 acttggatttttcccaata 15286845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 30870918 - 30870992
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||||| ||||  |||| ||||||||||||  |||||| ||| ||||||||||||| | | ||||||||||||    
T  30870918 aaggtgaggattgcttcctctttataaactcttctcaagaatcttatctatccgatgtggaatttgggtttttcc 30870992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 1892098 - 1892175
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatcc 267  Q
    |||||| ||||||||||||  ||| |||||||| |  | ||||| |||||||| ||||||||||||||  ||||||||    
T  1892098 actcatccttacaaaaccggcttgtaaggtgaggagggcctcctctttataaattctcatcaagagtcctatctatcc 1892175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 6918927 - 6918988
Alignment:
Q  147 ttaaattcgataagttctaatacctgttgtaatttggggtctgactcattcttacaaaaccg 208  Q
    |||||||||| ||| |||||||| ||||| ||||||||| || ||||||  |||||||||||    
T  6918927 ttaaattcgacaagctctaatacatgttgaaatttggggcctaactcatatttacaaaaccg 6918988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 6919174 - 6919235
Alignment:
Q  147 ttaaattcgataagttctaatacctgttgtaatttggggtctgactcattcttacaaaaccg 208  Q
    |||||||||| ||| |||||||| ||||| ||||||||| || ||||||  |||||||||||    
T  6919174 ttaaattcgacaagctctaatacatgttgaaatttggggcctaactcatatttacaaaaccg 6919235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 24918270 - 24918201
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 246  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  24918270 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactct 24918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 1893844 - 1893780
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||||||||||| ||||||||||  |||||||| || |  |||||| |||||||||||||    
T  1893844 tcctctttataaactcttatcaagagtcgtatctatccaatatgagacttgagtttttcccaata 1893780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 292
Target Start/End: Complemental strand, 2716449 - 2716337
Alignment:
Q  180 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    |||||| || |||||| |||||||||||   ||  |||||||| | |||||||| |||||||||| | ||||| |||   |||||| |||||  ||||||    
T  2716449 ttggggcctaactcatccttacaaaaccagcttataaggtgaggagtgtctcctctttataaacttttatcaacagtaatatctattcgatgggggactt 2716350  T
Q  280 gggtttttcccaa 292  Q
     ||||||||||||    
T  2716349 tggtttttcccaa 2716337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 24792124 - 24792184
Alignment:
Q  184 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaact 244  Q
    ||||| |||||||||||||||||||  ||| | |||||| | |||||||| ||||||||||    
T  24792124 ggtctaactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 24792184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 40961820 - 40961748
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    |||||||||| ||||||||  ||||||||||| ||||| ||||| ||||||| ||| | | ||||| ||||||    
T  40961820 aaggtgagaagtgtctcctcgttataaactcttatcaaaagtcttatctatctgatatggaacttgagttttt 40961748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 4e-39; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 16876936 - 16877122
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  16876936 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 16877035  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  16877036 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16877122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 28149909 - 28149785
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||| ||||||||| | ||||||||||    
T  28149909 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagttttatctatccga 28149810  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||| ||||||||||||||||    
T  28149809 tgtgggacatgggtttttcccaata 28149785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 26098869 - 26098746
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || ||||||||||||||||||| ||   |||||||| | |||||||| |||||||||| | |||| |||||| ||| |||||||    
T  26098869 tgttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgat 26098770  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    ||||||||||||||||||||||||    
T  26098769 gtaggacttgggtttttcccaata 26098746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 15102613 - 15102737
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccga-tttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||||  | ||||| | || ||||| |||||||||||||||||||||||||||||||  ||    
T  15102613 tgttgaaatttggggtctaactcatccttacaaaaccggctttgtgaagtgaggagtgcctcctctttataaactctcatcaagagtctcatctatttga 15102712  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||||||||||||||||    
T  15102713 tgtgggacttgggtttttcccaata 15102737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 15102743 - 15102863
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||  |||||| |||||||||||| ||||  | ||||| | || ||||| |||||||||||||||||||||||||||||||| |||    
T  15102743 tgttgaaatttggggtc--actcatccttacaaaaccggtttgtgaagtgaggagtgactcctctttataaactctcatcaagagtctcatctatctgat 15102840  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  15102841 gt-ggacttgggtttttcccaata 15102863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 25999138 - 25999015
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || ||||||||||||||||||| ||   |||||||| | |||||||| |||||||||| | |||| |||||| ||| |||||||    
T  25999138 tgttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgat 25999039  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  25999038 gtgggacttgggtttttcccaata 25999015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 11313371 - 11313494
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||||| |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  11313371 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 11313470  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || ||| |||||||||||||||||    
T  11313471 gtgggatttgggtttttcccaata 11313494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 15101100 - 15101223
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  15101100 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 15101199  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||| ||||||||||||    
T  15101200 gtgggacttggatttttcccaata 15101223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 16590299 - 16590176
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| || ||||| |||| ||||| |||||||| |||   |||||||||  ||||||||||    
T  16590299 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgat 16590200  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  16590199 gtgggacttgggtttttcccaata 16590176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 16605081 - 16605204
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| || ||||| |||| ||||| |||||||| |||   |||||||||  ||||||||||    
T  16605081 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgat 16605180  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  16605181 gtgggacttgggtttttcccaata 16605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 26098457 - 26098334
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||| || ||   |||||||| | |||||||| |||||||||| | |||| |||||| |||||||||||    
T  26098457 tgttgaaatttggggcctaactcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgat 26098358  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  26098357 gtgggacttgggtttttcccaata 26098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 150 - 294
Target Start/End: Complemental strand, 26098685 - 26098540
Alignment:
Q  150 aattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca 248  Q
    ||||||| ||||||| ||||| ||||| ||||||||| || |||||||||||||||| || ||   |||||||| | |||||||| |||||||||| | |    
T  26098685 aattcgacaagttctgataccatgttgaaatttggggcctaactcattcttacaaaagcggttcataaggtgaggagtgtctcctctttataaactatta 26098586  T
Q  249 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||| |||||| ||| |  |||||| |||||||||||||||||||||    
T  26098585 tcatgagtcttatcaagacgatgtgggacttgggtttttcccaata 26098540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 11317019 - 11316835
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||  |||||||||||    
T  11317019 ctctttgggcttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcaaccttacaaaacc 11316922  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  |||  | ||||| | || | ||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  11316921 ggcttgtgaagtgaggagtgccccctctttataaactctcatcaagagtctcatctatccgatgtggaacttgagtttttcccaata 11316835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 11317099 - 11317040
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  11317099 tttataaactctcatcaagagtttcatctatccgatgtgggacttgggtttttcccaata 11317040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 25998932 - 25998809
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || | |||| ||||||||| || ||   |||||||| | |||||||| |||||||||| | |||| |||||| |||||||||||    
T  25998932 tgttgaaatttggggcctaaatcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgat 25998833  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  25998832 gtgggacttgggtttttcccaata 25998809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 5269262 - 5269363
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||||||||| |||||| |||||| ||||||||||||  ||| |||||||| |||| || || ||||||||||||  |||||||||| |||||||||||    
T  5269262 tgttgtaatttagggtctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgat 5269361  T
Q  271 gt 272  Q
    ||    
T  5269362 gt 5269363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 24558692 - 24558575
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| || |||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||| ||||| |||    
T  24558692 aatttggggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtggga 24558593  T
Q  277 cttgggtttttcccaata 294  Q
    ||||| ||||||||||||    
T  24558592 cttggatttttcccaata 24558575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 19291907 - 19292023
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||| | || |||||| ||||||||||| | ||  |||||||| |||||||||| | || ||||||| ||||||||||| |||||||||||    
T  19291907 tgttgaaatttggagcctaactcatccttacaaaaccaacttataaggtgaggattgtctcctctatacaaactcttatcaagagtcttatctatccgat 19292006  T
Q  271 gtaggacttgggttttt 287  Q
    || |||||| |||||||    
T  19292007 gtgggactttggttttt 19292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 24558904 - 24558780
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| |||||||||||   ||| |||||||| |||||||||| ||||||||||||  | |||||||| ||||||||||    
T  24558904 ctgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgtctcctctttataaactcttctaaagagtcttatctatccga 24558805  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    |||  ||| | ||||||| ||||||    
T  24558804 tgtgagacataggttttttccaata 24558780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 10418327 - 10418434
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||||||||||||   |||||||||||    
T  10418327 tgttggaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctcatcaagagtgctatctatccgat 10418426  T
Q  271 gtaggact 278  Q
    || |||||    
T  10418427 gtgggact 10418434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 165 - 278
Target Start/End: Original strand, 12134466 - 12134579
Alignment:
Q  165 aatacctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatcta 264  Q
    |||| |||||| ||||||||| || |||||| |||||||||||| |||| ||||| || | |||||||| ||||||||||||  ||||||||   |||||    
T  12134466 aataactgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagtgctatcta 12134565  T
Q  265 tccgatgtaggact 278  Q
    |||||||| |||||    
T  12134566 tccgatgtgggact 12134579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 16876819 - 16876936
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||| |  ||||||||||  ||||||| ||    
T  16876819 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaagagtcttgtctatcctat 16876918  T
Q  271 gtaggacttgggtttttc 288  Q
    || |||||||| ||||||    
T  16876919 gtgggacttggatttttc 16876936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 19712571 - 19712696
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||||||| ||||| ||||||||||||||| || |||||| |||||||||||   ||| |||||||| |||| ||||| |||||||||    
T  19712571 ccttgaattcgacaagttctgataccatgttgtaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaac 19712670  T
Q  244 tctcatcaagagtctcatctatccga 269  Q
    |||  ||||||||   ||||||||||    
T  19712671 tcttctcaagagtgctatctatccga 19712696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 296
Target Start/End: Original strand, 6623443 - 6623539
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 296  Q
    |||||||||  ||| |||||||| |||| | ||  |||||| |||||  |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  6623443 acaaaaccggcttgtaaggtgaggattgcccccactttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataaa 6623539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 30526889 - 30526832
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggac-ttgggtttttccca 291  Q
    |||||||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  30526889 tttataaactctcatcaagagtctcatctatccgatgtgggactttaggtttttccca 30526832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 30539471 - 30539415
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccca 291  Q
    |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  30539471 tttataaactcttatcaaaagtcttatctatccgatgtgggacttgggtttttccca 30539415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 19054608 - 19054501
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||| | ||||||||||||  |||||||| | |||||||||||    
T  19054608 tgttgaaatttggggactaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaactcttctcaagagtgttatctatccgat 19054509  T
Q  271 gtaggact 278  Q
    || |||||    
T  19054508 gtgggact 19054501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 19712393 - 19712516
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||| ||  ||| |||||| | |||| |||||  ||||||||| |  |||||||||| |||||||||||    
T  19712393 tgttgaaatttggggcctaactcatccttacaaaatcggcttgtaaggtggggattgcctcctccttataaactattctcaagagtcttatctatccgat 19712492  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || | || ||| ||||||||||||    
T  19712493 gtggaacatggatttttcccaata 19712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 26394622 - 26394543
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| | || || |||||||||||||    
T  26394622 aaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtggaacatgagtttttcccaata 26394543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 30539350 - 30539243
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| ||   |||| ||||||||||||  ||| |||||||| | ||||||   |||||||||||| ||||||||||| |||||||||||    
T  30539350 tgttgaaatttggggcctagttcatccttacaaaaccggcttgtaaggtgaggagtgtctcgcctttataaactcttatcaagagtcttatctatccgat 30539251  T
Q  271 gtaggact 278  Q
    || |||||    
T  30539250 gtgggact 30539243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 15293869 - 15293987
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||||||||||| | |||| |||| |||||||  |||  ||||||| | ||||||   |||||||||||||||||||| ||| ||||||| ||||   ||    
T  15293869 aatttggggtctaattcatccttataaaaccggcttgtgaggtgaggaatgtctctgctttataaactctcatcaagaatctaatctatctgatgcgaga 15293968  T
Q  277 cttgggtttttcccaataa 295  Q
    |||| ||||||||||||||    
T  15293969 cttgagtttttcccaataa 15293987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 18494407 - 18494501
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttaca 202  Q
    ||||||||| |||||||||||||| |||||||||| |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| ||||||    
T  18494407 ctctttaggcttggtgcgtgaataggtttaggcagcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttaca 18494501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 2902902 - 2902819
Alignment:
Q  202 aaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    |||||||| ||| ||||||||| | ||||||| || ||||||||| || |||||||| ||||||||||||||||||||| ||||||    
T  2902902 aaaaccgacttgtaaggtgagagt-gtctcctctt-ataaactcttatgaagagtcttatctatccgatgtaggacttgagttttt 2902819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 8144126 - 8144025
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||    
T  8144126 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtggga 8144027  T
Q  277 ct 278  Q
    ||    
T  8144026 ct 8144025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 10733433 - 10733534
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||  |||||||| | |||| ||| |||| |||    
T  10733433 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtgttatctgtccaatgtggga 10733532  T
Q  277 ct 278  Q
    ||    
T  10733533 ct 10733534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 1744831 - 1744938
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||| ||    
T  1744831 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtactatctatccaat 1744930  T
Q  271 gtaggact 278  Q
    || |||||    
T  1744931 gtgggact 1744938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 24055098 - 24055205
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||| | ||||||||||||  ||||||||   |||||||||||    
T  24055098 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaactcttctcaagagtgctatctatccgat 24055197  T
Q  271 gtaggact 278  Q
    || |||||    
T  24055198 gtgggact 24055205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 18494284 - 18494386
Alignment:
Q  192 tcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccca 291  Q
    |||| ||||||||||||  ||| ||| |||| |||| ||||| |||||||| | |  ||||||||||  |||||| ||||| ||| ||||||||||||||    
T  18494284 tcatccttacaaaaccggcttgtaagatgaggattgcctcctctttataaattattctcaagagtcttgtctatctgatgtgggatttgggtttttccca 18494383  T
Q  292 ata 294  Q
    |||    
T  18494384 ata 18494386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 31926 - 31969
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||    
T  31926 tttataaactcttatcaagagtcttatctatccgatgttggact 31969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 25184089 - 25184018
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 271  Q
    |||||||||  ||| | |||||| ||||||| || |||||||||||| ||||||| ||| ||||||||||||    
T  25184089 acaaaaccggcttgtacggtgaggattgtcttctctttataaactcttatcaagaatcttatctatccgatg 25184018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 12124760 - 12124806
Alignment:
Q  248 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| ||||||||||||| ||||| |||||| ||||||||||||||    
T  12124760 atcaatagtctcatctatctgatgtgggacttaggtttttcccaata 12124806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 17147894 - 17147968
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactc 245  Q
    ||||| |||||| || || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||    
T  17147894 tgttgaaatttgtggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactc 17147968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 22911485 - 22911539
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctc 231  Q
    ||||| |||||| |||||||||||||||||||| ||| |||||||| | ||||||    
T  22911485 aatttagggtctaactcattcttacaaaaccgacttgtaaggtgaggagtgtctc 22911539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 2923011 - 2923068
Alignment:
Q  237 tataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||| ||||||||||  |||||||||| || |||| || |||||||||||||    
T  2923011 tataaactcttatcaagagtcatatctatccgacgtgggacatgagtttttcccaata 2923068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 17096687 - 17096788
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| | || ||| | | |||||| ||||||||||||  |||||| ||  |||||| ||||    
T  17096687 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtacggcgaggagtttctcctctttataaactcttctcaagactcctatctattcgat 17096786  T
Q  271 gt 272  Q
    ||    
T  17096787 gt 17096788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 28072467 - 28072568
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||||||||| | ||||||| ||||||| || | ||| ||| |||| | | |||||| ||||||||||||  ||||| |||| ||||| ||||||| |||    
T  28072467 aatttggggtataactcattgttacaaatccaacttgtaagatgaggagtatctcctctttataaactcttgtcaagcgtcttatctaaccgatgtggga 28072566  T
Q  277 ct 278  Q
    ||    
T  28072567 ct 28072568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 30527083 - 30527034
Alignment:
Q  245 ctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||| ||||||||||||||| ||||||| ||| || ||||||    
T  30527083 ctcatcaagagtttcatctatccgatgtgggacttgagttgtttccaata 30527034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 27914321 - 27914397
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 253  Q
    ||||||||| || |||||| ||||||||||||  ||| ||||| || | || ||||| |||||||||||| ||||||    
T  27914321 aatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaactctgatcaag 27914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 29742469 - 29742546
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||| ||||| |||||||||| |||||||||||||  |  ||||||||| ||||||  |||||||| ||||    
T  29742469 aaggtgaggattgcctcctctttataaactttcatcaagagtct--taaatccgatgtgggacttaagtttttcctaata 29742546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 12016817 - 12017003
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||| ||||||| ||||||||||||||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  12016817 ctctttgggcttggtgtgtgaataggtttaggcagtccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 12016916  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  12016917 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 12017003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 17077072 - 17077256
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    ||||||||| |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||  |||||||||||    
T  17077072 ctctttaggcttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcaaccttacaaaacc 17077169  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||||||||||||  ||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17077170 ggcttgcaaggtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaata 17077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 28246099 - 28245985
Alignment:
Q  180 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    |||||| || |||||| |||||||||||| ||||||||||||| |||| || || |||||||||||||||||||||||||||||||||||||| ||||||    
T  28246099 ttggggcctaactcatccttacaaaaccggtttgcaaggtgaggattgccttctctttataaactctcatcaagagtctcatctatccgatgtgggactt 28246000  T
Q  280 gggtttttcccaata 294  Q
    |||||||||||||||    
T  28245999 gggtttttcccaata 28245985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 295
Target Start/End: Complemental strand, 28245964 - 28245782
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| ||||||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  28245964 ctctttgggtttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 28245867  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |  |||||||||||| |||| ||||| |||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||||    
T  28245866 ggcttgcaaggtgaggattgcctcctctttataaactctcat---gagtctcatctatccgatgtgggacttgggtttttcccaataa 28245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 17076929 - 17077052
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||  ||||||||||||  |||||| |||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  17076929 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgcaaagtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgat 17077028  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  17077029 gtgggacttgggtttttcccaata 17077052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 43943788 - 43943664
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  43943788 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 43943689  T
Q  271 gtaggacttgggtttttcccaataa 295  Q
    || ||||||||||||||||||||||    
T  43943688 gtgggacttgggtttttcccaataa 43943664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 25753594 - 25753717
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||  || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||| |||||||||||  ||||||||||    
T  25753594 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgat 25753693  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  25753694 gtgggacttgggtttttcccaata 25753717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 27634315 - 27634438
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||||||||||||| || |||||| ||||||||| ||  ||| ||||||||||||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  27634315 tgttgtaatttggggcctaactcatccttacaaaatcggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatctatccgat 27634414  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||| ||||||||||||||    
T  27634415 gtgggactttggtttttcccaata 27634438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 122 - 294
Target Start/End: Complemental strand, 5488532 - 5488359
Alignment:
Q  122 gtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtg 220  Q
    ||||||||||| |||||||| | |||  || |||| ||| ||| ||| | ||||| |||||| || || |||||| ||||||||||||  ||| ||||||    
T  5488532 gtgcgtgaataggtttaggcggccctagaactcgacaagctctgatatcatgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtg 5488433  T
Q  221 agaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    || |||| ||||| ||||||||||||  |||||||||| || |||||||||| |||||||||||||||||||||    
T  5488432 aggattgcctcctctttataaactcttctcaagagtcttatttatccgatgtgggacttgggtttttcccaata 5488359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 12016672 - 12016795
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  12016672 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 12016771  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  12016772 gtgggacttgggtttttcccaata 12016795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 28395292 - 28395168
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||| ||    
T  28395292 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactctt-tcaagagtcttatctatccaat 28395194  T
Q  271 gtaggacttgggtttttcccaataaa 296  Q
    || |||||||||||||||||||||||    
T  28395193 gtgggacttgggtttttcccaataaa 28395168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 29113565 - 29113441
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| |||||||||||   ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||| ||    
T  29113565 ctgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctga 29113466  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||| ||||||||||||||||    
T  29113465 tgtgggacatgggtttttcccaata 29113441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 21498646 - 21498523
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||  || || |||||| |||||  ||||||||||  ||||||||||    
T  21498646 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattaccttctctttatatactcttctcaagagtcttgtctatccgat 21498547  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  21498546 gtgggacttgggtttttcccaata 21498523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 53864020 - 53863897
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||| ||||| |||||| |||||||||||| ||   |||||||| | |||||||| |||||||||| | ||||| ||||| |||||||||||    
T  53864020 tgttgaaatttgtggtctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcaaaagtcttatctatccgat 53863921  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || ||||||||||||||| |||||    
T  53863920 gttggacttgggtttttctcaata 53863897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 54210492 - 54210369
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| ||  ||||||||  ||||| |||||| |||||  ||||||||||  ||||||||||    
T  54210492 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaatttgagaattacctcctctttatatactcttctcaagagtcttgtctatccgat 54210393  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  54210392 gtgggacttgggtttttcccaata 54210369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 145 - 294
Target Start/End: Complemental strand, 56511439 - 56511289
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||| ||   |||||||| | || ||||| |||||||||    
T  56511439 ccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaac 56511340  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||| ||||||||||| |||||  | |||| |||||||||||||||||||||    
T  56511339 tcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaata 56511289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 3055880 - 3055776
Alignment:
Q  189 gactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 288  Q
    ||||||| ||||||||||||| ||  |||||||| | ||  |||| |||||||||||||||||||||||  |||||||| |||| |||||||||||||||    
T  3055880 gactcatccttacaaaaccgacttttaaggtgaggagtgcatcctctttataaactctcatcaagagtcctatctatccaatgtgggacttgggtttttc 3055781  T
Q  289 ccaat 293  Q
    |||||    
T  3055780 ccaat 3055776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 28497222 - 28497326
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| |||||||||||| ||| ||||  ||  | || ||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  28497222 actcatccttacaaaaccggtttacaagccgaagagtgcctcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcc 28497321  T
Q  290 caata 294  Q
    |||||    
T  28497322 caata 28497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 1922980 - 1923103
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||||||||||||| |||| |||||||  ||| | |||||  ||||  |||| ||||||||||||  |||||||||| ||||||| |||    
T  1922980 tgttgaaatttggggtctgactcatccttataaaaccggcttgtatggtgatgattgcttcctctttataaactcttctcaagagtcttatctatctgat 1923079  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||| ||||||||||||||||    
T  1923080 gtgggacatgggtttttcccaata 1923103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 8559960 - 8560083
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||  || ||||| |||| |||||   |||||||||| ||||||||||| |||||||||||    
T  8559960 tgttgaaatttggggtctaactcatccttacaaaaccggcttctaaagtgaggattgcctcctcgatataaactcttatcaagagtcttatctatccgat 8560059  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || ||||||||  |||||||||||    
T  8560060 gtgggacttggacttttcccaata 8560083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 33629835 - 33629651
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| ||  |||  |||||| || |||| ||| ||| ||||| ||||| ||||||||| || ||||||  | ||||||||    
T  33629835 ctctttgggcttggtgcgtgaataggt--aggtggtccttgaagtcgacaagctctgataccatgttgaaatttggggcctaactcatcgtcacaaaacc 33629738  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  |||  | ||||| | |  ||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  33629737 ggcttgtgatgtgaggagtacctcctatttataaactctcatcaagagtctcatctatccaatgtggaacttgggtttttcccaata 33629651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 39110996 - 39110899
Alignment:
Q  197 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||||  ||| |||| ||| |||||||||| |||||| |||||  |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  39110996 cttacaaaaccggcttgtaaggcgaggattgtctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 39110899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 155 - 278
Target Start/End: Complemental strand, 990679 - 990555
Alignment:
Q  155 gataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 253  Q
    |||||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||| ||| |||||||| | || ||||| ||||||||||||  |||||    
T  990679 gataagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaag 990580  T
Q  254 agtctcatctatccgatgtaggact 278  Q
    ||| | ||||||||||||| |||||    
T  990579 agtgttatctatccgatgtgggact 990555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 8304988 - 8305067
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||||| | |||||||||| ||||| ||||| |||||||||||||||||| || |||||||||||||    
T  8304988 aaggtgaggattgtctcctctatataaactcttatcaaaagtcttatctatccgatgtaggacatgagtttttcccaata 8305067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 23350870 - 23350791
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||||| |||||| ||||| ||||||||||| || |||||||||| ||| |||||||||||||||||    
T  23350870 aaggtgaggattgtctcctctttatatactcttatcaagagtcttatttatccgatgtgggatttgggtttttcccaata 23350791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 56511619 - 56511496
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||| || ||   |||||||| | || ||||| |||||||||||| ||||||||||| |||||  | ||    
T  56511619 tgttgaaatttggggcctaactcatccttacaaaatcggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaat 56511520  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  56511519 gtgggacttgggtttttcccaata 56511496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 49380898 - 49380992
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||||  ||||||| ||||||||||||    
T  49380898 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttggatttttcccaata 49380992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 33629978 - 33629917
Alignment:
Q  229 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 290  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  33629978 ctcctatttataaactctcatcaagagtctcatctatccaatgtgggacttgagtttttccc 33629917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 280
Target Start/End: Original strand, 10390437 - 10390573
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||||||||| |||||| |||||||||| | ||   |||||||| | |||||||| |||||||||    
T  10390437 ccttgaattcgacaagctctgataccatgttgaaatttggggtctaactcatccttacaaaactggttcataaggtgaggaatgtctcctctttataaac 10390536  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttg 280  Q
    | | |||||||| || |||||||| |||| |||||||    
T  10390537 tattatcaagagacttatctatccaatgtgggacttg 10390573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 22865884 - 22865761
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||| |||||| |||||| |||||||||||| ||   |||||||| | || | ||| |||||||||| | |||||| |||| |||||||||||    
T  22865884 tgttgaaatttagggtctaactcatccttacaaaaccggttcataaggtgaggactgccccctctttataaactattatcaagggtcttatctatccgat 22865785  T
Q  271 gtaggacttgggtttttcccaataa 295  Q
    || ||||||| ||||||||||||||    
T  22865784 gt-ggacttgagtttttcccaataa 22865761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 52827237 - 52827337
Alignment:
Q  187 ctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 286  Q
    ||||||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  |||||||| ||||  ||||||||||||    
T  52827237 ctgactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctatccaatgtgagacttgggtttt 52827336  T
Q  287 t 287  Q
    |    
T  52827337 t 52827337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 991319 - 991212
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| | || |||||  |||||||||||  |||||||| | |||||||||||    
T  991319 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcattataaactcttctcaagagtgttatctatccgat 991220  T
Q  271 gtaggact 278  Q
    || |||||    
T  991219 gtgggact 991212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 47491883 - 47491958
Alignment:
Q  219 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||| ||||||| |||||||||  ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  47491883 tgaggattgcctcctttatataaactcctatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 47491958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 272
Target Start/End: Complemental strand, 23018585 - 23018484
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  23018585 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtcatatctatccgat 23018486  T
Q  271 gt 272  Q
    ||    
T  23018485 gt 23018484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 3640274 - 3640198
Alignment:
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| |||||||||| | |||||||||| ||||||||||| |||||||||| || |||| || |||||||||||||    
T  3640274 gtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgacgtgggacatgagtttttcccaata 3640198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 280
Target Start/End: Original strand, 7892646 - 7892750
Alignment:
Q  177 aatttggggtctgactcattcttacaaaacc-gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagg 275  Q
    |||||||||||| |||||| |||| | |||| |  ||| |||||||| |||||||||| | |||||||||  ||||||||||| ||||||||||||| ||    
T  7892646 aatttggggtctaactcatccttaaagaaccagcgttgtaaggtgaggattgtctcctctatataaactcatatcaagagtcttatctatccgatgtggg 7892745  T
Q  276 acttg 280  Q
    |||||    
T  7892746 acttg 7892750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 27634457 - 27634557
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||||||||||||| || ||||||  ||||||||||    
T  27634457 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatcgttacaaaacc 27634556  T
Q  208 g 208  Q
    |    
T  27634557 g 27634557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 29669351 - 29669459
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||    
T  29669351 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccga 29669450  T
Q  270 tgtaggact 278  Q
    ||| |||||    
T  29669451 tgtgggact 29669459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 45426926 - 45427026
Alignment:
Q  172 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 271  Q
    |||| ||||||||| || |||||| ||||||||||||| ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||    
T  45426926 gttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatg 45427025  T
Q  272 t 272  Q
    |    
T  45427026 t 45427026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 26806615 - 26806503
Alignment:
Q  180 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    |||||| || |||||| |||||||||| |  ||| ||| |||| | ||||||  | ||||||||||| ||||||||||  ||||||||||| | ||||||    
T  26806615 ttggggcctaactcatccttacaaaactggcttgtaagttgaggagtgtctc--tcttataaactcttatcaagagtcctatctatccgatttgggactt 26806518  T
Q  280 gggtttttcccaata 294  Q
    |||||||||||||||    
T  26806517 gggtttttcccaata 26806503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 35399342 - 35399461
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||  |||||||||||    
T  35399342 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcaaccttacaaaacc 35399441  T
Q  208 gatttgcaaggtgagaattg 227  Q
    |  ||| |||||||| ||||    
T  35399442 ggcttgtaaggtgaggattg 35399461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 289
Target Start/End: Complemental strand, 50307372 - 50307273
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| |||||||||| | ||   |||||||| | || ||||  ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  50307372 actcatccttacaaaactggttcataaggtgaggagtgcctccgctttataaactcttgtcaagagtcttatctatccgatgtgggacttgggtttttcc 50307273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 51469596 - 51469489
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||| |||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  51469596 tgttgaaatttggggcctaactcatccttacacaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 51469497  T
Q  271 gtaggact 278  Q
    || |||||    
T  51469496 gtgggact 51469489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 52214730 - 52214623
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||| | ||||| || ||    
T  52214730 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtattatctacccaat 52214631  T
Q  271 gtaggact 278  Q
    || |||||    
T  52214630 gtgggact 52214623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 53386101 - 53386176
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 246  Q
    ||||| |||||| ||||| |||||| ||||||||||||| ||| |||||||| | |||||||| ||||||||||||    
T  53386101 tgttgaaatttgaggtctaactcatccttacaaaaccgacttgtaaggtgaggaatgtctcctctttataaactct 53386176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 53740297 - 53740190
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  53740297 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgat 53740198  T
Q  271 gtaggact 278  Q
    || |||||    
T  53740197 gtgggact 53740190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 42312887 - 42312821
Alignment:
Q  229 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    ||||| |||||||||| ||||||||||||||||||||||||| | | ||||| |||||| |||||||    
T  42312887 ctcctctttataaactttcatcaagagtctcatctatccgatatggaacttgagttttttccaataa 42312821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 45684208 - 45684286
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||| ||||||| || | |||||||| | ||||||||||  ||||||||||||| |||| ||||||||||||||||    
T  45684208 aggtgaggattgtcttctctatataaacttttatcaagagtcgtatctatccgatgtgggacatgggtttttcccaata 45684286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 49380746 - 49380664
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 282  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||| ||||||||| ||||    
T  49380746 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccaatgtaggacctggg 49380664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 33629637 - 33629596
Alignment:
Q  253 gagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  33629637 gagtctcatctatccgatgtgggacttgggtttttcccaata 33629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 33629896 - 33629855
Alignment:
Q  253 gagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  33629896 gagtctcatctatccgatgtgggacttgggtttttcccaata 33629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 15665269 - 15665161
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| |||||| || || |||||| ||||||||||||  ||| |||||||| | || ||||| | ||||||||||  |||||||||  ||||||||||    
T  15665269 ctgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttctcaagagtcctatctatccga 15665170  T
Q  270 tgtaggact 278  Q
    ||| |||||    
T  15665169 tgtgggact 15665161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 20093428 - 20093332
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 286  Q
    |||||| ||||||||||||||||  |||||||||| ||  | || |||||||| ||| ||||||||||| || |||| |||||| |||||| |||||    
T  20093428 actcatccttacaaaaccgatttataaggtgagaagtgcattctctttataaattcttatcaagagtcttatttatctgatgtaagacttgagtttt 20093332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 33797117 - 33797221
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| ||||| ||||||  ||| |||||||| | || ||| | |||||||||||| ||||||||||  |||||||| |||| ||| | ||||||||||    
T  33797117 actcatccttacgaaaccggcttggaaggtgaggagtgcctcgtctttataaactcttatcaagagtcctatctatccaatgtgggattcgggtttttcc 33797216  T
Q  290 caata 294  Q
    |||||    
T  33797217 caata 33797221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 3640527 - 3640448
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||| ||||| | | |||||||| ||||||||||| ||||||||||||| |||  || |||||||||||||    
T  3640527 aaggtgaggattgcctcctctatttaaactcttatcaagagtcttatctatccgatgtgggagatgagtttttcccaata 3640448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 27048125 - 27048208
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 253  Q
    |||||| ||||||||| || |||||| ||||||||||||  |||||||||||| | || ||||| |||||||||| | ||||||    
T  27048125 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgcaaggtgaggagtgcctcctctttataaacttttatcaag 27048208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 29669667 - 29669774
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||| | |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  29669667 tgttgaaatttggggtttaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatctgat 29669766  T
Q  271 gtaggact 278  Q
    || |||||    
T  29669767 gtgggact 29669774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 51470598 - 51470491
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |  | |||||  |||||||||||  |||||||||  |||||||||||    
T  51470598 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagagcctcctccttataaactcttctcaagagtcctatctatccgat 51470499  T
Q  271 gtaggact 278  Q
    || |||||    
T  51470498 gtgggact 51470491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 400373 - 400451
Alignment:
Q  172 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc 250  Q
    |||| ||||||||| || |||||| |||||||||| |  |||||||||||  |||||||| | ||||||||||||||||    
T  400373 gttgaaatttggggcctaactcatccttacaaaactgtcttgcaaggtgaatattgtctcatctttataaactctcatc 400451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 5212009 - 5212091
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    |||||||||||||||||||  ||| |||||||| |||||||  | |||||||||||| || |||||||| | ||||| |||||    
T  5212009 actcattcttacaaaaccggattgtaaggtgaggattgtctattctttataaactcttattaagagtcttacctatctgatgt 5212091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 14945245 - 14945135
Alignment:
Q  184 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggt 283  Q
    ||||| |||||| |||||||||||| ||   |||||||| ||||  |||| | ||||||||||    |||||||| ||||||||||||| |||| || ||    
T  14945245 ggtctaactcatccttacaaaaccggttcataaggtgaggattgcatcctctatataaactctttcgaagagtcttatctatccgatgtgggacatgtgt 14945146  T
Q  284 ttttcccaata 294  Q
    |||||||||||    
T  14945145 ttttcccaata 14945135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 20441500 - 20441566
Alignment:
Q  226 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 292  Q
    |||||| | ||||||||||||||| |||| |||||||||||  |||| |||||||||||||| ||||    
T  20441500 tgtctcttctttataaactctcattaagaatctcatctatctaatgtgggacttgggttttttccaa 20441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 43972469 - 43972363
Alignment:
Q  172 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 271  Q
    |||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||| |||| |  |||||||||  ||||||||||||    
T  43972469 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatcaacttttctcaagagtcctatctatccgatg 43972370  T
Q  272 taggact 278  Q
    | |||||    
T  43972369 tgggact 43972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 7806413 - 7806497
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttt 285  Q
    |||||||||  ||| |||||||| | |||||||| ||||||| || ||||||||||||| |||||||||||||  ||| |||||||    
T  7806413 acaaaaccggcttgtaaggtgaggagtgtctcctctttataagctatcatcaagagtct-atctatccgatgtgagacctgggttt 7806497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 9758371 - 9758318
Alignment:
Q  219 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    ||||| ||||||||| | |||||||||| ||||||||||| |||||||||||||    
T  9758371 tgagagttgtctcctctatataaactcttatcaagagtcttatctatccgatgt 9758318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 45427241 - 45427326
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 256  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  45427241 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 45427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 52810660 - 52810721
Alignment:
Q  217 ggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| | |||||||| ||||||||||||  |||||| ||| |||||||||||||||||||    
T  52810660 ggtgaggagtgtctcctctttataaactcttctcaagaatcttatctatccgatgtaggact 52810721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 56509718 - 56509617
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| | ||||||||||  ||| ||| |||| | || ||||| ||||||||||||  ||||| |||  |||||||||||||||||    
T  56509718 aatttggggcctaactcatccgtacaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagggtcctatctatccgatgtagga 56509619  T
Q  277 ct 278  Q
    ||    
T  56509618 ct 56509617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 34205982 - 34206090
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataa-actctcatcaagagtctcatctatccga 269  Q
    ||||| ||||||||  || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||| ||||| ||||||||||| ||||| ||||    
T  34205982 tgttgaaatttgggacctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatctaaccga 34206081  T
Q  270 tgtaggact 278  Q
    ||| |||||    
T  34206082 tgtgggact 34206090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 39110813 - 39110709
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    ||||| |||||||||| ||  ||| |||||||| |||| ||||| |||| | |||||  |||||| ||| |||||||||||||  |||||| |||||| |    
T  39110813 actcaatcttacaaaatcggcttgtaaggtgaggattgcctcctctttacatactcttctcaagattcttatctatccgatgtgagacttgagttttttc 39110714  T
Q  290 caata 294  Q
    |||||    
T  39110713 caata 39110709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 40197269 - 40197229
Alignment:
Q  225 ttgtctcctttttataaactctcatcaagagtctcatctat 265  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  40197269 ttgtctcctctttataaactcttatcaagagtctcatctat 40197229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 13254498 - 13254391
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||| | ||||||||||||  |||| ||||  |||||||| ||    
T  13254498 tgttgaaatttggggcctaactcatgcttacaaaaccgggttgtaaggtgaggagtgcctcatctttataaactcttctcaatagtcctatctatccaat 13254399  T
Q  271 gtaggact 278  Q
    || |||||    
T  13254398 gtgggact 13254391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 14115524 - 14115579
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| || |||||||||| | |||||||||| ||||||||||| |||||||||||    
T  14115524 aaggtaaggattgtctcctctatataaactcttatcaagagtcttatctatccgat 14115579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 21497680 - 21497779
Alignment:
Q  179 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| ||||||| |||||    
T  21497680 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttccaatctaaccgatgtgggact 21497779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 21498294 - 21498195
Alignment:
Q  179 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| ||||||| |||||    
T  21498294 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttccaatctaaccgatgtgggact 21498195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 21647614 - 21647693
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||| || || ||||| ||||||| |||| ||||||||||  ||||||||||||| |||||||  |||||| |||||    
T  21647614 aaggtgataagtggctcctctttataacctcttatcaagagtcatatctatccgatgtgggacttgaatttttctcaata 21647693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 27048397 - 27048504
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||  || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| |||||    
T  27048397 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagcttcctatctaaccgat 27048496  T
Q  271 gtaggact 278  Q
    || |||||    
T  27048497 gtgggact 27048504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 34206251 - 34206346
Alignment:
Q  178 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataa-actctcatcaagagtctcatctatccgatgt 272  Q
    |||||||| || |||||| ||||| ||||||  ||| |||||||| | || ||||| ||||||| ||||| ||||||||||| ||||| |||||||    
T  34206251 atttggggcctaactcatccttacgaaaccggcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatctaaccgatgt 34206346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 35565174 - 35565072
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| ||||||||||||  ||| |||| ||| |||| ||| |  ||||||||||  ||||||||||  |||||||| | || ||||||||||||||||    
T  35565174 actcatccttacaaaaccggcttgtaaggggaggattgcctc-tcattataaactcatatcaagagtcctatctatccaacgtgggacttgggtttttcc 35565076  T
Q  290 caat 293  Q
    ||||    
T  35565075 caat 35565072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 36558455 - 36558562
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | ||  | || ||||||||||||  |||| ||||  |||||||||||    
T  36558455 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttactctttataaactcttctcaaaagtcatatctatccgat 36558554  T
Q  271 gtaggact 278  Q
    || |||||    
T  36558555 gtgggact 36558562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 53559358 - 53559417
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||| |||||  |||||||| | ||||||||||||| |||||||| ||||||||||||    
T  53559358 tttatatactcttctcaagagttttatctatccgatgtgggacttggttttttcccaata 53559417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 53720703 - 53720782
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| || |||| ||||| || ||||||| | ||||| ||||| ||||||||||||| ||||||  |||||||||||||    
T  53720703 aaggtaaggattgcctcctcttaataaacttttatcaaaagtcttatctatccgatgtgggacttcagtttttcccaata 53720782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 53738197 - 53738304
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || | |||| |||||||||| |  ||| |||||||  | |||||||| ||||||||||||  |||||||||| |||||| | ||    
T  53738197 tgttgaaatttggggcctaagtcatccttacaaaactggcttgtaaggtgacgagtgtctcctctttataaactcttctcaagagtcttatctattctat 53738296  T
Q  271 gtaggact 278  Q
    || |||||    
T  53738297 gtgggact 53738304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 4645940 - 4645866
Alignment:
Q  198 ttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    |||||||| ||  ||| |||||||| ||||| |||| |||||| |||||  |||||||||| |||||||||||||    
T  4645940 ttacaaaaacggcttgtaaggtgaggattgtatcctctttatatactcttctcaagagtcttatctatccgatgt 4645866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 6778665 - 6778739
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactc 245  Q
    ||||| |||||| ||||| |||||  ||||||||||||  |||  ||||||| |||||||||| |||||||||||    
T  6778665 tgttgaaatttgaggtctaactcaaccttacaaaaccggcttgtgaggtgaggattgtctcctctttataaactc 6778739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 39910406 - 39910456
Alignment:
Q  172 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgag 222  Q
    ||||||||||||||||| |||||| ||||||||| ||||||  ||||||||    
T  39910406 gttgtaatttggggtctaactcatccttacaaaatcgatttataaggtgag 39910456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 5065958 - 5065845
Alignment:
Q  181 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttg 280  Q
    |||||||| ||||||  | |||||||||| ||  |||||||| ||||  |||| |||||| | | |  |||||||||| |||||||||||||  ||||||    
T  5065958 tggggtctaactcatcatcacaaaaccgacttataaggtgaggattgcatcctctttatatatttttttcaagagtcttatctatccgatgtgagacttg 5065859  T
Q  281 ggtttttcccaata 294  Q
     |||||| ||||||    
T  5065858 agttttttccaata 5065845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 7198034 - 7198083
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    |||| |||||||||||| ||||||||||| |||||||| |||| ||||||    
T  7198034 tcctctttataaactcttatcaagagtcttatctatccaatgtgggactt 7198083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 21498502 - 21498441
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc 170  Q
    ||||||||| |||||||||||||| |||||||| | |||| ||||||| ||| ||| |||||    
T  21498502 ctctttaggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgatacc 21498441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 269
Target Start/End: Complemental strand, 9938586 - 9938466
Alignment:
Q  150 aattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca 248  Q
    ||||||| ||| ||| ||||| ||||| ||||| | |||| ||| || |||||||||| || ||  |||||||||| |||||||  |||||||||||| |    
T  9938586 aattcgaaaagctctgataccatgttgaaattttgcgtctaacttatccttacaaaactgacttataaggtgagaagtgtctcccctttataaactctta 9938487  T
Q  249 tcaagagtctcatctatccga 269  Q
    | || | ||| ||||||||||    
T  9938486 taaaaaatcttatctatccga 9938466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 37288913 - 37288965
Alignment:
Q  226 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||||||||||||||||||  |||||| ||  ||||||||||||| |||||    
T  37288913 tgtctcctttttataaactcttctcaagaatcatatctatccgatgtgggact 37288965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 6e-38; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 123 - 294
Target Start/End: Original strand, 39078711 - 39078883
Alignment:
Q  123 tgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtga 221  Q
    |||||||||| |||||||| | | || ||||||||||||||| ||||| ||||||||||||||| || |||||| ||||||||||||  ||| |||||||    
T  39078711 tgcgtgaataggtttaggcggcctttgaattcgataagttctgataccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtga 39078810  T
Q  222 gaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    | |||| ||||| ||||||||||||  ||||||||||  |||||||||| | |||||||||||||||||||||    
T  39078811 ggattgcctcctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttcccaata 39078883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 110 - 300
Target Start/End: Original strand, 9264427 - 9264618
Alignment:
Q  110 tctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccg 208  Q
    ||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||||||||||||| || |||||| ||||||||||||    
T  9264427 tctttgggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaaccg 9264526  T
Q  209 atttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaagaat 300  Q
      ||| || ||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  9264527 gcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataacgaat 9264618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 110 - 294
Target Start/End: Original strand, 4191049 - 4191234
Alignment:
Q  110 tctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccg 208  Q
    ||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| | ||| ||||||||| || |||||| ||||||||||||    
T  4191049 tctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatattgaaatttggggcctaactcatccttacaaaaccg 4191148  T
Q  209 atttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
      ||| ||||| || |||||||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  4191149 gcttgtaaggtcaggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 4191234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 51642561 - 51642749
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  51642561 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 51642660  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac-ttgggtttttcccaataa 295  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  51642661 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggactttgggtttttcccaataa 51642749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 9264219 - 9264405
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  9264219 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 9264318  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  ||||||||||  |||||||||||| |||||||| ||||||||||||    
T  9264319 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 9264405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 37058697 - 37058883
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||| ||| || |||||| |||||||||||    
T  37058697 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattttgggcctaactcatccttacaaaacc 37058796  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    | |||| |||||||| |||  ||||| |||||| |||||  ||||||||||  |||||| ||||| |||||||||||||||||||||    
T  37058797 ggtttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtctatctgatgtgggacttgggtttttcccaata 37058883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 50692642 - 50692518
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||| |||||||||||  |||||||||    
T  50692642 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccga 50692543  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||||||||||||||||    
T  50692542 tgtgggacttgggtttttcccaata 50692518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 171 - 292
Target Start/End: Complemental strand, 49477649 - 49477528
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    |||||||| |||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  49477649 tgttgtaaattggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 49477550  T
Q  271 gtaggacttgggtttttcccaa 292  Q
    || |||||||||||||||||||    
T  49477549 gtgggacttgggtttttcccaa 49477528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 119 - 294
Target Start/End: Original strand, 22407584 - 22407760
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 217  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||  ||| |||    
T  22407584 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 22407683  T
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| | || ||||| |||||| |||||  || |||||||  |||||||||||| |||||||| ||||||||||||    
T  22407684 gtgaggagtgcctcctctttatatactcttctcgagagtcttgtctatccgatgtgggacttggatttttcccaata 22407760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 40230628 - 40230752
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||  | |||||  ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  40230628 tgttgaaatttggggcttaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctcatcaagagtctcatctatccgat 40230727  T
Q  271 gtaggacttgggtttttcccaataa 295  Q
    || | ||||||||||||| ||||||    
T  40230728 gtggaacttgggtttttctcaataa 40230752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 294
Target Start/End: Complemental strand, 50692486 - 50692315
Alignment:
Q  120 tggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggt 219  Q
    ||||||||||||| |||||||| | |||| ||||||| ||| | |    | ||||| ||||||||| || |||||| ||||||||||||  ||| |||||    
T  50692486 tggtgcgtgaataggtttaggcggcccttgaattcgacaagctttc---catgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 50692390  T
Q  220 gagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  50692389 gaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 50692315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 9264075 - 9264198
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  9264075 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 9264174  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  9264175 gtgggacttgggtttttcccaata 9264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 109 - 295
Target Start/End: Complemental strand, 37223753 - 37223566
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||| ||||||| | || |||| | |||||||||||    
T  37223753 ctctttgggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgaaatttggagcctaactcttccttacaaaacc 37223654  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |  ||| |||||||  |||| ||||| ||||||||||||  ||| |||||| ||||||||||||| |||||| |||||||||||||||    
T  37223653 ggcttgtaaggtgatgattgcctcctctttataaactcttctcaggagtcttatctatccgatgtgggacttaggtttttcccaataa 37223566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 40230424 - 40230546
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||  ||||||||||||  | | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  40230424 tgttgaaatttggggcctaactcaaccttacaaaaccggctcgtaaggtgaggattg-ctcctctttataaactctcatcaagagtctcatctatccgat 40230522  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || | |||||||||||||||||||    
T  40230523 gtggaacttgggtttttcccaata 40230546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 119 - 294
Target Start/End: Original strand, 53640108 - 53640284
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 217  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| | ||| ||||| |||  | |||||| |||||| |||||  ||| |||    
T  53640108 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatattgaaatttagggcataactcatccttacataaccggcttgtaag 53640207  T
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| |||| ||||| |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  53640208 gtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 53640284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 22339856 - 22339733
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| |||| || |||||| ||||||||||||| ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  22339856 tgttgaaattgggggcctaactcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 22339757  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||| ||||||||||||    
T  22339756 gtgggacttggatttttcccaata 22339733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 287
Target Start/End: Original strand, 39956600 - 39956779
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||| ||||||| | || |||||| |||||||||||    
T  39956600 ctctttgggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgaaatttggagcctaactcatccttacaaaacc 39956699  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||| ||||| ||||||| ||||||    
T  39956700 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatctgatgtgggacttgagttttt 39956779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 54495620 - 54495523
Alignment:
Q  197 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||||  ||| |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  54495620 cttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 54495523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 4029633 - 4029757
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||||||| |||| |||||||  ||||| |||| ||||||||||||  |||||||||| |||||||||||    
T  4029633 tgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaagattgtatcctctttataaactcttctcaagagtcttatctatccgat 4029732  T
Q  271 gtaggacttgggtttttcccaataa 295  Q
    || |||||||  || ||||||||||    
T  4029733 gtgggacttgcattattcccaataa 4029757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 54591453 - 54591577
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| |||| |||   ||||||||||||  ||||||||||  |||||||||    
T  54591453 ctgttgaaatttggggtctaactcatgcttacaaaaccggcttgtaaggtgaggattgcctcacctttataaactcttctcaagagtcttgtctatccga 54591552  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||| ||||||||||||    
T  54591553 tgtgggacttggatttttcccaata 54591577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 272
Target Start/End: Original strand, 10758934 - 10759098
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || ||||||||||||||||||||| | |  ||| ||||||||||| | | ||| | ||||| |||||||||||| |||||| |||||||||||    
T  10758934 ctctttgggcttggtgcgtgaataagtttagacggctcttgaattcgataagctatgatatcatgttgaaatttggggtctaactcatccttacaaaacc 10759033  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    || |||  |||||||||||| ||||| |||||| | |||  |||| | ||| |||||||||||||    
T  10759034 gacttgtgaggtgagaattgcctcctatttatatattcttctcaaaaatcttatctatccgatgt 10759098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 25627909 - 25628033
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccga 269  Q
    ||||| ||||||||| || |||||| ||||||||||| | ||| |||||||| |||| ||||| ||||||| |||||  | |||| ||| ||||||||||    
T  25627909 tgttggaatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctcttttatatactcttctgaagaatcttatctatccga 25628008  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||||||||||||||||    
T  25628009 tgtgggacttgggtttttcccaata 25628033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 35011980 - 35011856
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| |||||||||||| ||   |||||||| | || ||||| |||||||||||| ||||||||||| |||||  | |    
T  35011980 ctgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaa 35011881  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||||||||||||||||    
T  35011880 tgtgggacttgggtttttcccaata 35011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 51338449 - 51338553
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||| ||||| ||||||||||||||||    
T  51338449 actcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcc 51338548  T
Q  290 caata 294  Q
    |||||    
T  51338549 caata 51338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 35011799 - 35011648
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||| ||   |||||||| | |||||||| ||||||| |    
T  35011799 ccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataatc 35011700  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    ||| ||||||||||| |||||  | |||| |||||||||||||| |||||||    
T  35011699 tcttatcaagagtcttatctactcaatgtgggacttgggttttttccaataa 35011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 51642417 - 51642540
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||| |     
T  51642417 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccaac 51642516  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || ||||||||||||||| |||||    
T  51642517 gtgggacttgggtttttcgcaata 51642540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 32034162 - 32034081
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 296  Q
    |||||||| |||||||||||| |||||||||| ||||||||||| |||||| |||||| |||| || |||||||||||||||    
T  32034162 aaggtgaggattgtctcctttgtataaactcttatcaagagtcttatctattcgatgtgggacatgagtttttcccaataaa 32034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 109 - 264
Target Start/End: Complemental strand, 49477505 - 49477349
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| | | ||| | |||||||| |||||| || |||||| |||||||||||    
T  49477505 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctttgatatcatgttgtaaattggggcctaactcatccttacaaaacc 49477406  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatcta 264  Q
    |  ||| |||||||| |||| ||||| |||||||||| |  |||||||||| |||||    
T  49477405 ggcttgtaaggtgaggattgcctcctctttataaacttttctcaagagtcttatcta 49477349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 50338370 - 50338494
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| |||||||||||| |||||  ||||||||||||  ||| |||||||  |||||||||| | |||||||||| ||||||||||| ||||||| ||    
T  50338370 ctgttgaaatttggggtctaactcaaccttacaaaaccggcttgtaaggtgaagattgtctcctctatataaactcttatcaagagtcttatctatctga 50338469  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    | |  |||||| ||||||| |||||    
T  50338470 tatgagacttgagtttttctcaata 50338494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 53639977 - 53640077
Alignment:
Q  194 attcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 293  Q
    |||||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||| | |||||||| |||||||||||    
T  53639977 attcttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttgtcaagagtcttatctatccgatatgggacttggatttttcccaat 53640076  T
Q  294 a 294  Q
    |    
T  53640077 a 53640077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 33909619 - 33909733
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||| |||||||||||| |||| |||   |||||||||||| ||||||||| | |  |||| |||    
T  33909619 tgttgaaatttggggtctaactcatccttacaaaaccgacttgcaaggtgaggattgcctc--atttataaactcttatcaagagttttagttatctgat 33909716  T
Q  271 gtaggacttgggttttt 287  Q
    || |||||||| |||||    
T  33909717 gtgggacttggattttt 33909733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 35015594 - 35015477
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| |  |||||| ||||||||||||  ||  || ||||| |||| ||||| |||||||||| | ||||||||| | ||||||||||||| |||    
T  35015594 aatttggggccaaactcatacttacaaaaccggcttataaagtgaggattgcctcctctttataaacttttatcaagagttttatctatccgatgtggga 35015495  T
Q  277 cttgggtttttcccaata 294  Q
    ||||| ||||||||||||    
T  35015494 cttggctttttcccaata 35015477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 50203846 - 50203947
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||||||| |||  |||||||| | || ||||| ||||||||||||  |||||||||| |||||||||||    
T  50203846 tgttgaaatttggggcctaactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactcttctcaagagtcttatctatccgat 50203945  T
Q  271 gt 272  Q
    ||    
T  50203946 gt 50203947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 19820517 - 19820632
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||| || || |||||| |||||||||||| |||| |||||||| |||||||||| ||||||||||||  |||||||| | || ||||||||    
T  19820517 tgttgaaatttgaggcctaactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactcttctcaagagttttat-tatccgat 19820615  T
Q  271 gtaggacttgggttttt 287  Q
    || | || |||||||||    
T  19820616 gtggaacatgggttttt 19820632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 32215548 - 32215620
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    |||||||||  ||| |||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  32215548 acaaaaccggcttgtaaggtgaggatggtctcctctttataaactctcatcaagagtctcatctatacgatgt 32215620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 10758757 - 10758880
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||| | |||| |||||| ||||||||||||  |||  ||||||| ||||||| || |||||| | |||  |||||||||| |||||||||||    
T  10758757 tgttgaaatttagagtctaactcatccttacaaaaccggcttgtgaggtgagtattgtcttctatttatataatcttctcaagagtcttatctatccgat 10758856  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || ||||||| |||||| ||||||    
T  10758857 gtgggacttgagttttttccaata 10758880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 11414480 - 11414366
Alignment:
Q  169 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 268  Q
    ||||||| |||||| || || |||||| ||||||||||||  ||  |||||||| |||||||||| ||||||||||||  |||||||||| || ||||||    
T  11414480 cctgttgaaatttgaggcctaactcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactcttctcaagagtcttat-tatccg 11414382  T
Q  269 atgtaggacttgggtt 284  Q
    |||| |||| ||||||    
T  11414381 atgtgggacatgggtt 11414366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 38422097 - 38421977
Alignment:
Q  172 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 271  Q
    |||| |||||||||||| |||||  ||||||||| ||  ||| |||||||||| || ||||| |  ||||||||| || || ||||| ||||||||||||    
T  38422097 gttgaaatttggggtctaactcaaccttacaaaatcggcttgtaaggtgagaactgcctcctat--ataaactcttattaatagtcttatctatccgatg 38422000  T
Q  272 taggacttgggtttttcccaata 294  Q
    | |||||| ||||||||||||||    
T  38421999 tgggacttaggtttttcccaata 38421977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 39956456 - 39956579
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || | |||| |||||||||| |  ||| |||||||| |||||||||| ||||||||||||  | |||| |||  |||||| |||    
T  39956456 tgttgaaatttggggcctaattcatccttacaaaactggcttgtaaggtgaggattgtctcctctttataaactcttcttaagattcttgtctatctgat 39956555  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||| ||||||||||||    
T  39956556 gtgggacttggatttttcccaata 39956579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 40926525 - 40926446
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| ||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| || |||||||||||||    
T  40926525 aaggagaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 40926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 43101360 - 43101467
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| |  |||||| ||||||||||||||||| |||||||| | || ||||| ||||||||||||  |||||||||  ||||||| |||    
T  43101360 tgttgaaatttggggccaaactcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatctgat 43101459  T
Q  271 gtaggact 278  Q
    || |||||    
T  43101460 gtgggact 43101467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 280
Target Start/End: Original strand, 44461055 - 44461165
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||| |||  |||||| |||||||||| ||||  ||||||||| | |||||||| |||||||||||| ||||||||| | || || ||||    
T  44461055 ctgttgaaatttggagtccaactcatccttacaaaactgattcacaaggtgaggaatgtctcctctttataaactcttatcaagagtgttatttacccga 44461154  T
Q  270 tgtaggacttg 280  Q
    ||| |||||||    
T  44461155 tgtgggacttg 44461165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 53761432 - 53761514
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaaga 298  Q
    ||||||| | || ||||| |||||||||||| |||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  53761432 aggtgaggagtgcctcctctttataaactcttatcaagggtcttatctatccgaagtgggacttgggtttttcccagtaaaga 53761514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 42259019 - 42258902
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||| | || |||||| ||| ||||| ||  ||| |||||||| |||| ||||| |||||| |||||  |||||| ||| ||||||||||||| |||    
T  42259019 aatttggagcctaactcatccttgcaaaatcggcttgtaaggtgaggattgcctcctctttatatactcttctcaagaatcttatctatccgatgtggga 42258920  T
Q  277 cttgggtttttcccaata 294  Q
    ||||| ||||||||||||    
T  42258919 cttggatttttcccaata 42258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 44145116 - 44145217
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    |||||||||||| | |||| |||| |||||| | ||  |||||||| |||||||||| |||||||||| | ||||||||||| ||||||| ||||| |||    
T  44145116 aatttggggtctaaatcatccttataaaaccaacttataaggtgagtattgtctcctctttataaactattatcaagagtcttatctatctgatgtggga 44145215  T
Q  277 ct 278  Q
    ||    
T  44145216 ct 44145217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 171 - 287
Target Start/End: Complemental strand, 12800205 - 12800089
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| ||||||  ||| ||||| | ||||||||||||| ||||  ||||||| ||||| | | ||||||||||| ||||||| ||     
T  12800205 tgttgaaatttggggtctaactcatctttataaaacgggtttgcaaggtgaggattgcttccttttaataaatttttatcaagagtcttatctatctgac 12800106  T
Q  271 gtaggacttgggttttt 287  Q
    || ||||||| ||||||    
T  12800105 gtgggacttgagttttt 12800089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 44145403 - 44145506
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| |||||| |||||  ||  |||||||| | || ||||||||||||| |||| ||||||||||  ||||||||||||| ||| ||||||||||||    
T  44145403 actcatccttacagaaccggcttataaggtgaggagtgcctcctttttataa-ctcttatcaagagtcatatctatccgatgtgggatttgggtttttcc 44145501  T
Q  290 caata 294  Q
    |||||    
T  44145502 caata 44145506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 4256349 - 4256242
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || ||||||||||| |||||||| ||| ||  |||| | |||||||| ||||||||||||  |||||||| | ||| |||||||    
T  4256349 tgttgaaatttggggcctaactcattcttaaaaaaccgacttgtaaaatgaggagtgtctcctctttataaactcttctcaagagtgttatccatccgat 4256250  T
Q  271 gtaggact 278  Q
    || |||||    
T  4256249 gtgggact 4256242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 22407430 - 22407553
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||| |||||  || ||||| |  ||||||||||    
T  22407430 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactcttctcgagagttttgtctatccgat 22407529  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||| | ||||||||||||    
T  22407530 gtgggacttagatttttcccaata 22407553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 25578714 - 25578792
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||  |||||||||| | |||||||||| ||||| ||||| ||||||||||||| |||| ||||||||||||||||    
T  25578714 aaggtgaagattgtctcctctatataaactcttatcaa-agtcttatctatccgatgtgggacatgggtttttcccaata 25578792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 26366846 - 26366731
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| |||| || |||||| ||||||||| ||   || |||||||| |||| ||| | ||||||||||||  ||||||||||  ||||||||||    
T  26366846 tgttgaaattgggggcctaactcatccttacaaaaacggcatgtaaggtgaggattgcctcatatttataaactcttctcaagagtcttgtctatccgat 26366747  T
Q  271 gtaggacttgggtttt 286  Q
    || |||||||||||||    
T  26366746 gtgggacttgggtttt 26366731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 29763685 - 29763799
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||| |||||| | |||| |||||||||||| ||   ||| || | | |||||||| |||||||||||| ||||||||||| |||||||||||    
T  29763685 tgttgaaatttagggtctaattcatccttacaaaaccggttcataagatggggagtgtctcctctttataaactcttatcaagagtcttatctatccgat 29763784  T
Q  271 gtaggacttgggtttt 286  Q
    || ||| |||||||||    
T  29763785 gtggga-ttgggtttt 29763799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 34992939 - 34992868
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    ||||||| |||| ||||| ||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||    
T  34992939 aggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 35358486 - 35358565
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| ||||||||||||||||| ||| |  |||||||||| ||||||| |||||  ||||||| ||||||||||||    
T  35358486 aaggtgaggattgtctcctttttatatacttttttcaagagtcttatctatctgatgtgagacttggatttttcccaata 35358565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 40927097 - 40927026
Alignment:
Q  219 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 290  Q
    |||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||| ||||||||    
T  40927097 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatggatttttccc 40927026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 47702461 - 47702536
Alignment:
Q  219 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||| ||||| || ||| |||||  |||||||||||||||||||||||| ||||||| |||||||||||||    
T  47702461 tgaggattgcctcctcttcatatactcttctcaagagtctcatctatccgatgtgggacttgtgtttttcccaata 47702536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 26926978 - 26926904
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||| ||||| |||| ||| |||||||    
T  26926978 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggttttttcc 26926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 29369839 - 29369793
Alignment:
Q  248 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  29369839 atcaagagtcttatctatccgatgtgggacttgggtttttcccaata 29369793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 268
Target Start/End: Original strand, 16078852 - 16078949
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 268  Q
    ||||| |||| |||| || |||||  |||| |||||||| |||||||||||  |||| ||||||| |||||||| | ||||||||||| |||||||||    
T  16078852 tgttgaaattgggggcctaactcaaccttaaaaaaccgacttgcaaggtgatgattgcctcctttatataaacttttatcaagagtcttatctatccg 16078949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 21832686 - 21832803
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| |||||||||||    |  |||||||| ||||||||||  |||||||||||  ||||||||||  |||||||||||| |||    
T  21832686 aatttggggcctaactcatccttacaaaaccagcatataaggtgaggattgtctcctccttataaactcttctcaagagtcttgtctatccgatgtggga 21832785  T
Q  277 cttgggtttttcccaata 294  Q
    |||| | |||| ||||||    
T  21832786 cttgagatttttccaata 21832803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 39269567 - 39269498
Alignment:
Q  219 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 288  Q
    |||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||| ||||||    
T  39269567 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatggatttttc 39269498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 42637791 - 42637860
Alignment:
Q  226 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |||||||||| |||||||||| ||||||||||| |||||||| |||| |||  || ||||||||||||||    
T  42637791 tgtctcctttatataaactcttatcaagagtcttatctatccaatgtgggatatgagtttttcccaataa 42637860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 5440633 - 5440569
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| ||||||||||||  ||||||||||  |||||||||||| | |||||||||||||||||||    
T  5440633 tcctctttataaactcttctcaagagtcttgtctatccgatgtggaacttgggtttttcccaata 5440569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 34992644 - 34992576
Alignment:
Q  219 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    |||| |||| ||||| ||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||    
T  34992644 tgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 21832188 - 21832311
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  |||  ||||||| |||| ||| | |||||||||| |  ||||||||||  ||||||||||    
T  21832188 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggtgaggattgcctcatctttataaacttttctcaagagtcttgtctatccgat 21832287  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    ||  ||||| |||| ||| |||||    
T  21832288 gtgagacttaggttgttctcaata 21832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 40926774 - 40926695
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| ||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| | | ||||| ||||||    
T  40926774 aaggagaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacattgattttttccaata 40926695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 54369154 - 54369047
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||| ||||| || |||||| ||||| |||||| |||| || ||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  54369154 tgttggaatatggggcctaactcatccttacgaaaccggtttgtaaagtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 54369055  T
Q  271 gtaggact 278  Q
    || |||||    
T  54369054 gtgggact 54369047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 26915178 - 26915108
Alignment:
Q  224 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||| | |||||||||| ||||||||||| ||||||| ||| | ||||||| |||||| ||||||    
T  26915178 attgtctcctctatataaactcttatcaagagtcttatctatctgatctgggacttgagttttttccaata 26915108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 42604959 - 42604905
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    ||||||||||  ||||||||||||||||||||||||||  ||||||| |||||||    
T  42604959 tttataaacttccatcaagagtctcatctatccgatgtgagacttggatttttcc 42604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 44574052 - 44573966
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 256  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  44574052 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 44573966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 21833640 - 21833516
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| ||||| ||||||  ||| | | | || |||| ||||| ||||||||||||  || |||||||  | ||||| |    
T  21833640 ctgttgaaatttggggcctaactcatccttacgaaaccggcttgtaggctaaggattgcctcctctttataaactcttctccagagtcttgtttatccaa 21833541  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| ||||||||||||||| |||||    
T  21833540 tgtgggacttgggtttttctcaata 21833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 24539261 - 24539161
Alignment:
Q  179 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaa-ctctcatcaagagtctcatctatccgatgtaggac 277  Q
    ||||||| || |||||| ||||||||| ||  ||| |||||||| | |||||||| |||| ||| |||| ||||||||||| ||||| | ||||||||||    
T  24539261 tttggggcctaactcatccttacaaaatcggcttgtaaggtgaggagtgtctcctctttacaaaactcttatcaagagtcttatctaactgatgtaggac 24539162  T
Q  278 t 278  Q
    |    
T  24539161 t 24539161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 39018827 - 39018903
Alignment:
Q  219 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |||| |||||||||| | |||||||||  ||||||||||| ||||||||||||| ||||    ||||||||||||||    
T  39018827 tgaggattgtctcctctatataaactcctatcaagagtcttatctatccgatgtgggacaaaagtttttcccaataa 39018903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 51836290 - 51836411
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| | ||||||||| |||||| | |||  ||||||| | |||||||| ||||||||  ||||| || | ||||| |||||| ||    
T  51836290 tgttgaaatttggggtctaattcattcttataaaaccaacttgtgaggtgaggagtgtctcctatttataaa--ctcataaaaaatctcaactatccaat 51836387  T
Q  271 gtaggacttgggtttttcccaata 294  Q
     | ||| || ||||||||||||||    
T  51836388 atgggatttaggtttttcccaata 51836411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 3985880 - 3985781
Alignment:
Q  179 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | ||  |||| ||||||||||||  |||| ||||  ||||||||||||| |||||    
T  3985880 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactcttctcaaaagtcatatctatccgatgtgggact 3985781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 21750590 - 21750483
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||||| |  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| |||||    
T  21750590 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatctaaccgat 21750491  T
Q  271 gtaggact 278  Q
    || |||||    
T  21750490 gtgggact 21750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 34715444 - 34715551
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||| |||   |||||||||||    
T  34715444 tgttgaaatttggggcataactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaaagtgctatctatccgat 34715543  T
Q  271 gtaggact 278  Q
    || |||||    
T  34715544 gtgggact 34715551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 42311270 - 42311207
Alignment:
Q  229 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 292  Q
    ||||| |||||||||| | |||| || ||  ||||||||||||| |||||||||||||||||||    
T  42311270 ctcctctttataaacttttatcaggattcctatctatccgatgtgggacttgggtttttcccaa 42311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 44573754 - 44573679
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 246  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  44573754 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 44573679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 46139341 - 46139246
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    |||||||||||| |||||||||||||||||    ||| || |||||| ||||| ||| |||||||||| |  |||||||| | |||||||| ||||    
T  46139341 aatttggggtctaactcattcttacaaaactagcttgtaaagtgagatttgtcccctctttataaacttttctcaagagtgttatctatccaatgt 46139246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 13769286 - 13769387
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||| |||| |||    
T  13769286 aatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccaatgtggga 13769385  T
Q  277 ct 278  Q
    ||    
T  13769386 ct 13769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 27219418 - 27219337
Alignment:
Q  197 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||||    
T  27219418 cttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggact 27219337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 37040016 - 37040073
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    ||||||||||||||||||| | ||| |||||| ||||||||||| |||| | ||||||    
T  37040016 aaggtgagaattgtctcctctatattaactcttatcaagagtcttatcttttcgatgt 37040073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 14170007 - 14170095
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||| |||  |||||||| | || |||||||||| |||||    
T  14170007 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaaatcttctcaagagtgttatttatccgatgtgggact 14170095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 44573422 - 44573334
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| ||||||||||||  ||| | |||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||||    
T  44573422 actcatccttacaaaaccggcttgtagggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggact 44573334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 3435412 - 3435599
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||||||||||||| || |||||| |||||||||||    
T  3435412 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaacc 3435511  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    | |||| |||||||| |||| ||||| | ||||||||||  |||||||||| ||||||||||||| |||||||  ||||| |||||||    
T  3435512 ggtttgtaaggtgaggattgcctcctctgtataaactcttctcaagagtcttatctatccgatgtgggacttgaattttttccaataa 3435599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 109 - 295
Target Start/End: Complemental strand, 12432076 - 12431889
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || ||||||| |||||| |||||||| | |||| |||| || ||| | | ||||| ||||| ||||||||| ||  ||||| |||||||||||    
T  12432076 ctctttgggcttggtgcatgaataggtttaggcggcccttgaatttgacaagctttgataccatgttgaaatttggggcctagctcatccttacaaaacc 12431977  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |  ||| |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12431976 ggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 12431889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 33985901 - 33986087
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||| ||||| |  |||| | |||||||||||    
T  33985901 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatctggggcccaactcttccttacaaaacc 33986000  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||| ||| |||||||||||||||||    
T  33986001 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggagttgggtttttcccaata 33986087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 119 - 294
Target Start/End: Complemental strand, 29684179 - 29684003
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 217  Q
    ||||||||||||||||||||||  |||||| ||||||| ||| ||| ||||| | ||| |||||||| ||| ||| || ||||||||||||  ||| |||    
T  29684179 ttggtgcgtgaataagtttaggtggtccttgaattcgacaagctctgataccatattgaaatttgggttctaacttatccttacaaaaccggcttgtaag 29684080  T
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| |||| ||||| |||||| |||||  ||||||||||  |||||| ||||  |||||||||||||||||||||    
T  29684079 gtgaggattgcctcctctttatatactcttctcaagagtcttgtctatctgatgcgggacttgggtttttcccaata 29684003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 17727513 - 17727396
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| || || ||||||||||||  |||||||||| ||||||||||||| |||    
T  17727513 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgatgtggga 17727414  T
Q  277 cttgggtttttcccaata 294  Q
    ||||||||||||||||||    
T  17727413 cttgggtttttcccaata 17727396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 295
Target Start/End: Original strand, 20998977 - 20999102
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||    
T  20998977 ctgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccga 20999076  T
Q  270 tgtaggacttgggtttttcccaataa 295  Q
    ||| ||||||||||||||||||||||    
T  20999077 tgtgggacttgggtttttcccaataa 20999102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 883609 - 883713
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  883609 actcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcc 883708  T
Q  290 caata 294  Q
    |||||    
T  883709 caata 883713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 107 - 287
Target Start/End: Complemental strand, 29101931 - 29101749
Alignment:
Q  107 cgctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaa 205  Q
    |||||||||||||||||||||||||| |||||||| | | || |||| |||||| ||| ||||| ||||| |||||| || || |||||| |||| ||||    
T  29101931 cgctctttaggtttggtgcgtgaataggtttaggcggcctttgaatttgataaggtctgataccatgttgaaatttgaggcctaactcatccttataaaa 29101832  T
Q  206 ccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    |||  |||  |||| || |||||||||| |||||||||||||  ||||| ||||  |||||||||||| ||||||| ||||||    
T  29101831 ccggcttgtgaggtaaggattgtctcctcttttataaactcttctcaagtgtcttgtctatccgatgtgggacttgagttttt 29101749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 884146 - 884049
Alignment:
Q  197 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  884146 cttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcatctatccgatgtgggacttgggtttttcccaata 884049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 32667300 - 32667175
Alignment:
Q  169 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 268  Q
    ||||||| ||||||||| || |||||| ||||||||||||  ||| ||||| || |||| ||||| | |||||||||| ||||||||||| ||||||| |    
T  32667300 cctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggattgcctcctctatataaactcttatcaagagtcttatctatctg 32667201  T
Q  269 atgtaggacttgggtttttcccaata 294  Q
    |||| |||||| ||||||||||||||    
T  32667200 atgtgggacttcggtttttcccaata 32667175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 16007093 - 16006969
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| | |||||||||| |||||| ||||||||||||  ||| |||||||| |||  ||||| |||||| |||||  ||||||||||  |||||||||    
T  16007093 ctgttgaactttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtctatccga 16006994  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||||||||||||||||    
T  16006993 tgtgggacttgggtttttcccaata 16006969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 183 - 294
Target Start/End: Original strand, 27545117 - 27545228
Alignment:
Q  183 gggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 282  Q
    |||||| |||||| |||||||||||| |||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||| |||     
T  27545117 gggtctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacatgga 27545216  T
Q  283 tttttcccaata 294  Q
    ||||| ||||||    
T  27545217 ttttttccaata 27545228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 34775472 - 34775349
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||| |||  ||||||||||  ||||||||||    
T  34775472 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgat 34775373  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  34775372 gtgggacttgggtttttcccaata 34775349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 109 - 289
Target Start/End: Complemental strand, 884028 - 883847
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| | | ||||| ||||  |||| |||| || |||||| |||||||||||    
T  884028 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctttgataccatgttaaaattgggggcctaactcatccttacaaaacc 883929  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |  ||| |||||||| |||| |||   ||||||||||||  ||||||||||  |||||||||| | ||||||||||||||||    
T  883928 ggcttgtaaggtgaggattgcctctcctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttcc 883847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 33985759 - 33985881
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||  ||||  |||||||||| ||||||||||    
T  33985759 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata--ctcttctcaagagtcttatctatccga 33985856  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||||||||||| ||||||    
T  33985857 tgtgggacttgggtttttgccaata 33985881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 12432220 - 12432097
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||  || |||||| |||| |||||| ||||| |||||||| |||| ||||| ||||||||||||  |||||| ||| |||||||||||    
T  12432220 tgttgaaatttgggacctaactcatccttaaaaaaccaatttgtaaggtgaggattgcctcctctttataaactcttctcaagattcttatctatccgat 12432121  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||| ||||| ||||||    
T  12432120 gtgggacttggattttttccaata 12432097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 25621274 - 25621397
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| ||||||||  |||| |||| |||||| |||||  |||||||||| |||||||||||    
T  25621274 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgagggttgtttcctctttatatactcttctcaagagtcttatctatccgat 25621373  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    ||  ||||||||||||||||||||    
T  25621374 gtgagacttgggtttttcccaata 25621397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 31761247 - 31761124
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||| | ||| |||||||| |||| ||| | | ||||||||||  |||| ||||| |||||||||||    
T  31761247 tgttgaaatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcttctatataaactcttctcaaaagtcttatctatccgat 31761148  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||| ||||||||||||||    
T  31761147 gtgggacttaggtttttcccaata 31761124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 19860131 - 19860029
Alignment:
Q  192 tcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccca 291  Q
    |||| ||||||||||||  ||| |||||| | |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||||||||||||||||    
T  19860131 tcatccttacaaaaccggcttgtaaggtgtggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttccca 19860032  T
Q  292 ata 294  Q
    |||    
T  19860031 ata 19860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 6183355 - 6183456
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||||| |||||||| ||||||||||||  ||||||||   |||||||||||    
T  6183355 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaactcttctcaagagtactatctatccgat 6183454  T
Q  271 gt 272  Q
    ||    
T  6183455 gt 6183456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 295
Target Start/End: Complemental strand, 39386766 - 39386661
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| |||||||||||  ||   |||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| |||||||||||    
T  39386766 actcatccttacaaaaccagttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcc 39386667  T
Q  290 caataa 295  Q
    ||||||    
T  39386666 caataa 39386661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 178 - 294
Target Start/End: Complemental strand, 32667085 - 32666969
Alignment:
Q  178 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac 277  Q
    |||||||| || ||||||  |||||||||||  ||| ||||| ||||||| ||||| | |||||||||| ||||||||||| || ||||| |||  ||||    
T  32667085 atttggggcctaactcatcattacaaaaccggcttgtaaggtaagaattgcctcctctatataaactcttatcaagagtcttatttatccaatgagggac 32666986  T
Q  278 ttgggtttttcccaata 294  Q
    |||||||||||||||||    
T  32666985 ttgggtttttcccaata 32666969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 6986449 - 6986528
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  6986449 aaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 6986528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 295
Target Start/End: Complemental strand, 12419896 - 12419829
Alignment:
Q  228 tctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |||||| ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12419896 tctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 12419829  T

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Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 40010089 - 40009966
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || || ||| ||||||||||||  ||| |||||||| |||| ||||| ||| ||  ||||  |||||||| | |||||||||||    
T  40010089 tgttgaaatttggggcctaacacatccttacaaaaccggcttgtaaggtgaggattgcctcctctttctatgctcttctcaagagttttatctatccgat 40009990  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  40009989 gtgggacttgggtttttcccaata 40009966  T

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Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 29695373 - 29695451
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||| ||||||| || ||||||||||||  |||||||||| |||||||||||||  ||||||||||||||||||||    
T  29695373 aggtgaggattgtctactctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 29695451  T

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Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 7257616 - 7257721
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| ||||||||||||| ||| |||||||| ||||  |||| |||||||||| |  |||||||||| ||||||||||| | |||||| | |||||||    
T  7257616 actcatccttacaaaaccgacttgtaaggtgaggattgcatcctctttataaactattctcaagagtcttatctatccgatatgggacttagatttttcc 7257715  T
Q  290 caataa 295  Q
    ||||||    
T  7257716 caataa 7257721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 8044534 - 8044658
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccga 269  Q
    ||||| ||||||||  || |||||| |||||||||| | ||   |||||||| | || ||||| ||||||||||||| ||||||||||| ||||||| ||    
T  8044534 tgttgaaatttgggacctaactcatccttacaaaactggttcataaggtgaggagtgcctcctcttttataaactcttatcaagagtcttatctatctga 8044633  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||  |||||||||||||||||||||    
T  8044634 tgcgggacttgggtttttcccaata 8044658  T

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Target: chr2; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 3976460 - 3976567
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| | | |||||||||||    
T  3976460 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatattatctatccgat 3976559  T
Q  271 gtaggact 278  Q
    || |||||    
T  3976560 gtgggact 3976567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 19859987 - 19859916
Alignment:
Q  224 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||||||||||||||||||||    
T  19859987 attgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataa 19859916  T

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Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 29676383 - 29676286
Alignment:
Q  197 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||| ||   |||||||| |||| ||||| | |||||||||| ||||||||||| |||||||||||||  ||| || |||||||||||||    
T  29676383 cttacaaaaccggttcttaaggtgaggattgactcctatatataaactcttatcaagagtcttatctatccgatgtgagacatgtgtttttcccaata 29676286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 18901852 - 18901960
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| ||  |||||||||||||||| |  ||| |||||||  | || ||||| ||||||||||||  |||||||||| ||||||||||    
T  18901852 ctgttgaaatttggggcctatctcattcttacaaaacaggcttgtaaggtgaagagtgcctcctctttataaactcttttcaagagtcttatctatccga 18901951  T
Q  270 tgtaggact 278  Q
    ||| |||||    
T  18901952 tgtgggact 18901960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 10571021 - 10570927
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||  ||| |||||||  |||| ||||  |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  10571021 acaaaaccggcttgtaaggtgaagattgcctccactttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 10570927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 26847276 - 26847349
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||||||| |||||| | |||||||||||| ||||||||||  |||||||| |||| ||||||||||||||||    
T  26847276 aaggtgagaagtgtctc-tctttataaactcttatcaagagtcctatctatccaatgtgggacttgggtttttcc 26847349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 4721846 - 4721911
Alignment:
Q  224 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| |||||||||||    
T  4721846 attgcctcctctatataaactcttatcaagagtctaatctatccgatgtgggacatgggtttttcc 4721911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 10429848 - 10429772
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 253  Q
    |||||||||||| |||||| ||||||||||||  ||| ||| |||| | |||||||| |||||||||||| ||||||    
T  10429848 aatttggggtctaactcatccttacaaaaccggcttgtaagatgaggagtgtctcctctttataaactcttatcaag 10429772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 10536925 - 10537005
Alignment:
Q  178 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 258  Q
    |||||||| || |||||| ||| |||||||| ||   |||||||||| || |||||| |||||||||||||||||||||||    
T  10536925 atttggggcctaactcatccttgcaaaaccggttcataaggtgagaagtgcctccttcttataaactctcatcaagagtct 10537005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 10542071 - 10542175
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| |||||||||||   ||| ||| |||| | |||||||| |||||||||||| |||||||||   |||||||  |||| ||||||| ||||||||    
T  10542071 actcatccttacaaaaccagcttgtaagatgaggagtgtctcctctttataaactcttatcaagagttcaatctatctaatgtgggacttgagtttttcc 10542170  T
Q  290 caata 294  Q
    |||||    
T  10542171 caata 10542175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 22447361 - 22447297
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||| ||||||| ||||| ||||| |||||| | ||||||||||||||||||||||||||    
T  22447361 tcctctttaaaaactcttatcaaaagtcttatctattcaatgtaggacttgggtttttcccaata 22447297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 33277548 - 33277636
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctat 265  Q
    |||||||||||| ||||||  ||||||||| || ||| ||||||||||||| ||| |||||||||||| | ||||| | ||| ||||||    
T  33277548 aatttggggtctaactcatctttacaaaactgacttgtaaggtgagaattgactcatttttataaacttttatcaataatcttatctat 33277636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 42768323 - 42768428
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||  | |||||||||||    
T  42768323 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagag--ttatctatccgat 42768420  T
Q  271 gtaggact 278  Q
    || |||||    
T  42768421 gtgggact 42768428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 3976992 - 3977099
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| ||  |||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  3976992 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaatttgaggagtgcctcctctttataaactcttctcaagagtactatctatccgat 3977091  T
Q  271 gtaggact 278  Q
    || |||||    
T  3977092 gtgggact 3977099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 15820100 - 15820151
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtga 221  Q
    |||||| |||||||||||| |||||||||||||||||||| ||| |||||||    
T  15820100 ctgttgaaatttggggtctaactcattcttacaaaaccgacttgtaaggtga 15820151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 23054441 - 23054334
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  23054441 tgttgaaatttggggcctaactcatccttacaaaaccgtcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttatatctatctgat 23054342  T
Q  271 gtaggact 278  Q
    || |||||    
T  23054341 gtgggact 23054334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 43195899 - 43195792
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  43195899 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatctgat 43195800  T
Q  271 gtaggact 278  Q
    || |||||    
T  43195799 gtgggact 43195792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 7877938 - 7877852
Alignment:
Q  192 tcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||  || |||||   |||||||||||||||||||    
T  7877938 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcgagagtgctatctatccgatgtaggact 7877852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 10849486 - 10849564
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagag 255  Q
    ||||||||| || |||||| ||||||||||| | ||| |||||||| | || ||||| |||||||||||| ||||||||    
T  10849486 aatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggagtgcctcctctttataaactcttatcaagag 10849564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 29684333 - 29684211
Alignment:
Q  172 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 271  Q
    |||| |||||| || || ||||||||||| |||| || |||| |||||||| |||| ||||| |||||| |||||  |||||||| |  ||||  |||||    
T  29684333 gttgaaatttgaggcctaactcattcttataaaatcgttttgtaaggtgaggattgcctcctctttatatactcttctcaagagttttgtctaatcgatg 29684234  T
Q  272 taggacttgggtttttcccaata 294  Q
      | |||||||||||||||||||    
T  29684233 cggaacttgggtttttcccaata 29684211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 294
Target Start/End: Complemental strand, 39108230 - 39108080
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||| ||| ||||| ||||| || ||| || ||||||||| ||||||||| ||  ||| |||||||  |||  ||||| | |||||||    
T  39108230 ccttgaattcgacaagctctgataccatgttgaaacttgaggcctgactcatccttacaaaatcggattgtaaggtgatgattacctcctctatataaac 39108131  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||| ||||||| ||| || |||| ||||| |||||||  ||||||||||||    
T  39108130 tcttatcaagattcttatatatctgatgtgggacttgaatttttcccaata 39108080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 14127240 - 14127301
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 296  Q
    |||||||| ||| ||||||||||| || |||| ||||| |||||| ||||||||||||||||    
T  14127240 tttataaattcttatcaagagtcttatttatctgatgtgggacttcggtttttcccaataaa 14127301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 18607273 - 18607366
Alignment:
Q  202 aaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    ||||||| || | ||||||||||||  ||||| |||||| |||||  | ||||||||  ||||||||||||  |||||| ||||||||||||||    
T  18607273 aaaaccggttcgtaaggtgagaattacctcctctttatatactcttcttaagagtcttgtctatccgatgtgagacttgtgtttttcccaataa 18607366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 21214190 - 21214275
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 256  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  21214190 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 21214275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 21734473 - 21734408
Alignment:
Q  229 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||| |||||| |||||  |||||||||| ||||||||||||| |||  ||||||||||||||||    
T  21734473 ctcctctttatatactcttctcaagagtcttatctatccgatgtgggatgtgggtttttcccaata 21734408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 10485278 - 10485222
Alignment:
Q  202 aaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 258  Q
    ||||||| || | |||||||| |||||||||| | ||||||||||||||||||||||    
T  10485278 aaaaccggttcgtaaggtgaggattgtctcctctatataaactctcatcaagagtct 10485222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 29695471 - 29695563
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattctta 200  Q
    |||||| || |||||||||||||| |||||||||| |||| ||||||| ||| ||| ||||| ||||  ||||||||| || |||||| ||||    
T  29695471 ctctttgggcttggtgcgtgaataggtttaggcagcccttgaattcgacaagctctgataccatgttaaaatttggggcctaactcatcctta 29695563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 39108470 - 39108398
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    ||||| ||| |||||||| |||||| |||||||||||| |||  |||||||| |||||||||| | |||||||    
T  39108470 tgttgaaatatggggtctaactcatccttacaaaaccggtttataaggtgaggattgtctcctctatataaac 39108398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 25286257 - 25286356
Alignment:
Q  179 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | ||| |||| |||||||||||| ||||||  ||  ||||| ||||||| |||||    
T  25286257 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtttcctctttataaactctgatcaagcttccaatctaaccgatgtgggact 25286356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 28895629 - 28895519
Alignment:
Q  183 gggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 282  Q
    |||||| |||||| ||||||||||||  ||| |||||||| | ||||| ||||||||||||||| ||| |||| |  |||| | | |||| ||| |||||    
T  28895629 gggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgtct-ctttttataaactcttatctagagccctatcttttcaatgtgggatttggg 28895531  T
Q  283 tttttcccaata 294  Q
    ||||| ||||||    
T  28895530 ttttttccaata 28895519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 32810894 - 32810965
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 271  Q
    |||||||||  ||| |||||||  |||||||||| |||||||||||| ||||||| ||  ||||||||||||    
T  32810894 acaaaaccggcttgtaaggtgatgattgtctcctctttataaactcttatcaagaatcctatctatccgatg 32810965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 43169361 - 43169250
Alignment:
Q  167 tacctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatc 266  Q
    ||||||||| ||| ||||| || |||| | |||||||||| |  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||    
T  43169361 tacctgttgaaatatggggcctaactcttccttacaaaactggcttgaaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatc 43169262  T
Q  267 cgatgtaggact 278  Q
    |||||| |||||    
T  43169261 cgatgtgggact 43169250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 10485216 - 10485170
Alignment:
Q  248 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||| ||||||||||||| |||| ||| ||||||||||||    
T  10485216 atcaagagtcttatctatccgatgtgggacatggatttttcccaata 10485170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 17265009 - 17265079
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 286  Q
    ||||||| |||| ||||| | |||||||| | | ||||||||| ||||||||||||| |||| ||||||||    
T  17265009 aggtgaggattgcctcctctatataaacttttaccaagagtcttatctatccgatgtgggacatgggtttt 17265079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 37812272 - 37812330
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtc 229  Q
    |||||||||||||||||| |||||| ||||||||| ||| |||  ||||||| ||||||    
T  37812272 tgttgtaatttggggtctaactcatccttacaaaatcgacttgtgaggtgaggattgtc 37812330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 38760315 - 38760421
Alignment:
Q  180 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 279  Q
    |||||| || ||||||  |||||||||||  ||| |||||||  | || ||||| |||||||||||| ||||||||||  ||||| | ||||  ||||||    
T  38760315 ttggggcctaactcatcgttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtcctatctacctgatgcgggactt 38760414  T
Q  280 gggtttt 286  Q
    |||||||    
T  38760415 gggtttt 38760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 39108335 - 39108277
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtc 229  Q
    ||||| || |||||||||||||||| ||||||||||||  ||| |||||||| ||||||    
T  39108335 tgttgaaacttggggtctgactcatccttacaaaaccggcttgtaaggtgaggattgtc 39108277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 11969161 - 11969060
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||| ||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||| || |||    
T  11969161 aattttgggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgacgtggga 11969062  T
Q  277 ct 278  Q
    ||    
T  11969061 ct 11969060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 5424770 - 5424822
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgag 222  Q
    |||||| |||||||||||| |||||| ||||||||||||  ||| ||||||||    
T  5424770 ctgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgag 5424822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 6986428 - 6986376
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatcc 267  Q
    |||||||| |||||||||| |||||||||||   |||||||||| ||||||||    
T  6986428 aaggtgaggattgtctcctctttataaactcctctcaagagtcttatctatcc 6986376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 244
Target Start/End: Original strand, 7257088 - 7257200
Alignment:
Q  134 gtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctga-ctcattcttacaaaaccgatttgcaaggtgagaattgtctc 231  Q
    |||||||| | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || | ||||| ||||||||||||||||| ||| |||| ||||  ||    
T  7257088 gtttaggcggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaaactcatccttacaaaaccgatttgtaagatgaggattgcatc 7257187  T
Q  232 ctttttataaact 244  Q
    || ||||||||||    
T  7257188 ctctttataaact 7257200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 13839247 - 13839371
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| |||||| ||||| |||| |  | |||||||||  ||| |||||||| |||| ||| | |||| |||||||  ||||||||||  |||||||||    
T  13839247 ctgttgaaatttgaggtctaactcgtcatcacaaaaccggattgtaaggtgaggattgcctcatctttagaaactcttctcaagagtcttgtctatccga 13839346  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    |||   ||||| |||||||| ||||    
T  13839347 tgtgaaacttgagtttttccaaata 13839371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 21213893 - 21213981
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||| |||| |||||    
T  21213893 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccaatgtgggact 21213981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 22447222 - 22447178
Alignment:
Q  164 taatacctgttgtaatttggggtctgactcattcttacaaaaccg 208  Q
    |||||| ||||| |||||||||||| |||||| ||||||||||||    
T  22447222 taatacatgttgaaatttggggtctaactcatccttacaaaaccg 22447178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 29273151 - 29273337
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  29273151 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 29273250  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||| ||||  ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  29273251 ggcttgtaaggtgaggattgcctcccctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 29273337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 109 - 294
Target Start/End: Original strand, 39649010 - 39649196
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| |||| || ||| ||| |||   ||||| |||||||||  | |||||| |||||||||||    
T  39649010 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaatttgacaagctctgatattatgttgaaatttggggcataactcatccttacaaaacc 39649109  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  39649110 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 39649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 119 - 286
Target Start/End: Original strand, 43361693 - 43361861
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 217  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||  |||||| |||||| ||||||||||||  ||| |||    
T  43361693 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattgagggtctaactcatccttacaaaaccggcttgtaag 43361792  T
Q  218 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 286  Q
    ||||| ||||  |||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||    
T  43361793 gtgaggattgcttcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttt 43361861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 1234041 - 1233918
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| ||||||  | ||||||||   |||  ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  1234041 tgttgaaatttggggtctaactcatcatcacaaaaccagcttgtgaggtgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgat 1233942  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||| ||||||    
T  1233941 gtgggacttgggtttttaccaata 1233918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 41812647 - 41812765
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||| |||||| |||||| || |||||||||| ||| || ||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||    
T  41812647 tgttgaaatttcgggtctaactcatcctcacaaaaccgacttgtaaagtgagaagtgtctcctctttataaactctcatcaagagtctcatttatccaat 41812746  T
Q  271 gtaggacttgggtttttcc 289  Q
    ||  |||||||||||||||    
T  41812747 gtgagacttgggtttttcc 41812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 109 - 272
Target Start/End: Complemental strand, 15391997 - 15391833
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||     
T  15391997 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggccttactcatccttacaaaact 15391898  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||||    
T  15391897 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgt 15391833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 109 - 295
Target Start/End: Original strand, 21428192 - 21428380
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagttt-aggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaac 206  Q
    |||||| || |||||||||||||| |||| | || | |||| ||||||| ||| ||||||||| ||||| ||||||||| || |||||| || |||| ||    
T  21428192 ctctttgggcttggtgcgtgaatatgttttaagcggcccttgaattcgacaagctctaataccatgttgaaatttggggcctaactcatcctcacaatac 21428291  T
Q  207 cgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    ||| ||| ||||| || |||||||||| | |||||||||| ||||||| ||| |||| || ||||||| |||||| |||||||||||||    
T  21428292 cgacttgtaaggtaaggattgtctcctctgtataaactcttatcaagaatcttatctttctgatgtagaacttggctttttcccaataa 21428380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 52846838 - 52846961
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  52846838 tgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 52846937  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  52846938 gtgggacttgggtttttcccaata 52846961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 171 - 297
Target Start/End: Complemental strand, 5222809 - 5222683
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||| |||||| |||||| |||| |||||||  ||| |||||||| |||||||||| |  ||||||||| ||||||||||| ||||||| |||    
T  5222809 tgttgaaatttagggtctaactcatccttataaaaccggcttgtaaggtgaggattgtctcctctacataaactcttatcaagagtcttatctatcagat 5222710  T
Q  271 gtaggacttgggtttttcccaataaag 297  Q
    || |||||| |||||||||||||||||    
T  5222709 gtgggacttaggtttttcccaataaag 5222683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 15392139 - 15392017
Alignment:
Q  172 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 271  Q
    |||| ||||||||| || |||||| ||||||||||||  ||| || ||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||    
T  15392139 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatg 15392040  T
Q  272 taggacttgggtttttcccaata 294  Q
    | |||||||||||||||||||||    
T  15392039 tgggacttgggtttttcccaata 15392017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 21428047 - 21428170
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||| || || |||||| || ||||||||| |||| ||||| || |||||| ||||| |||||||||| ||||||||||| |||||||| ||    
T  21428047 tgttgaaatttgagggctaactcatcctcacaaaaccggtttgtaaggtaaggattgtcacctttatataaactcttatcaagagtcttatctatccaat 21428146  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    ||||||||||  ||||||||||||    
T  21428147 gtaggacttgaatttttcccaata 21428170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 43361541 - 43361656
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| ||||||| |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  43361541 tgttgaaattgggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 43361640  T
Q  271 gtaggacttgggtttt 286  Q
    || |||||||||||||    
T  43361641 gtgggacttgggtttt 43361656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 22892683 - 22892800
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || |||||| ||||||||||||  |||  ||| ||| | |||||||| |||||||| |||||||||||||||||| |||  ||||| |||    
T  22892683 aatttggggcctaactcatccttacaaaaccggcttgtgaggcgaggagtgtctcctctttataaagtctcatcaagagtctcatttatttgatgtggga 22892782  T
Q  277 cttgggtttttcccaata 294  Q
    ||||||||||||||||||    
T  22892783 cttgggtttttcccaata 22892800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 24382349 - 24382472
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || | ||||  | |||||||||| |||  || |||| | || ||||| ||||||||||||||||||||||||||| ||||||||    
T  24382349 tgttgaaatttggggcctaattcatcatcacaaaaccgacttgtgagatgaggagtgcctcctctttataaactctcatcaagagtctcatttatccgat 24382448  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || ||| |||||||||||||||||    
T  24382449 gttggatttgggtttttcccaata 24382472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 48558310 - 48558433
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| ||||  |||| |||||| |||||  |||||||||| |||||||||||    
T  48558310 tgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttatatactcttctcaagagtcttatctatccgat 48558409  T
Q  271 gtaggacttgggtttttcccaata 294  Q
     | |||||||||||||||||||||    
T  48558410 atgggacttgggtttttcccaata 48558433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 145 - 294
Target Start/End: Original strand, 38871117 - 38871267
Alignment:
Q  145 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 243  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||| || || || ||| |||||||||||| ||   |||||||| | || ||||| |||||||||    
T  38871117 ccttgaattcgacaagctctgataccatgttgaaatttgaggcctaacgcatccttacaaaaccggttcttaaggtgaggagtgcctcctctttataaac 38871216  T
Q  244 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    | | ||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  38871217 ttttatcaagagtcttatctatctgatgtgggacttgggtttttcccaata 38871267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 2997044 - 2997168
Alignment:
Q  170 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 269  Q
    |||||| ||||||||| || |||||| ||||||||||||  |||  ||||||| |||  ||||| |||||| |||||  |||||||| | ||||||||||    
T  2997044 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggtgagtattacctcctctttatatactcttctcaagagttttatctatccga 2997143  T
Q  270 tgtaggacttgggtttttcccaata 294  Q
    ||| |||||| ||||||||||||||    
T  2997144 tgtgggacttaggtttttcccaata 2997168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 13959517 - 13959393
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||| ||||||   ||| ||||||| |||||| |||| ||||||||||||  |||||||||| |||||||||||    
T  13959517 tgttgaaatttggggcctaactcatccttaaaaaaccagcttgtaaggtgaaaattgtatcctctttataaactcttctcaagagtcttatctatccgat 13959418  T
Q  271 gtaggacttgggtttttcccaataa 295  Q
    ||  |||||| ||| ||||||||||    
T  13959417 gtgagacttgcgttattcccaataa 13959393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 29413419 - 29413340
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  29413419 aaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctacccgaagtaggacttgggtttttcccaata 29413340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 52921500 - 52921579
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| | || |||||||||||||||||||| |||||||   ||||||||||||| |||||||||||||||||||||    
T  52921500 aaggtgaggaatgcctcctttttataaactctcaccaagagtactatctatccgatgtgggacttgggtttttcccaata 52921579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 21538929 - 21539046
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||||||| || | |||| |||||||||||| |||| |||||||| |||| ||||| |||||||| |||  |||||||||| || |||||||| | |||    
T  21538929 aatttggggcctaaatcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttatttatccgatatggga 21539028  T
Q  277 cttgggtttttcccaata 294  Q
    | ||| ||||||||||||    
T  21539029 catggatttttcccaata 21539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 286
Target Start/End: Original strand, 33342273 - 33342382
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 276  Q
    ||||| |||||| |||||| ||||||||||||  ||| ||||||||  ||  ||||| |||||| |||||  |||||||||||||||||| ||||| |||    
T  33342273 aatttagggtctaactcatccttacaaaaccggcttgtaaggtgaggtttacctcctctttatatactcttctcaagagtctcatctatctgatgtggga 33342372  T
Q  277 cttgggtttt 286  Q
    ||||||||||    
T  33342373 cttgggtttt 33342382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 11018969 - 11018845
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||| ||||| |||||| ||||||||| |||||||  ||| ||  |||||||||| ||||||||||||  |||||||||| |  |||| |||    
T  11018969 tgttgaaatttgaggtctaactcatccttacaaaatcgatttgtgaggggaagattgtctcctctttataaactcttctcaagagtcttagttatctgat 11018870  T
Q  271 gtaggacttgggtttttcccaataa 295  Q
    || |||||||  |||||||||||||    
T  11018869 gtgggacttgaatttttcccaataa 11018845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 22826778 - 22826850
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| |||||||||    
T  22826778 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttt 22826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 39648906 - 39648989
Alignment:
Q  210 tttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||| |||||| |||||||||||||||||||||    
T  39648906 tttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctat-cgatgtgggacttgggtttttcccaata 39648989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 2697320 - 2697427
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||| | ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  2697320 tgttgaaatttggggtctaactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 2697419  T
Q  271 gtaggact 278  Q
    || |||||    
T  2697420 gtgggact 2697427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 9381015 - 9380892
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |  ||||| ||||||| || ||| || ||| |  ||||||||||  ||||||||||    
T  9381015 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtattgtgaggattgtcttctctttttatactattctcaagagtcttgtctatccgat 9380916  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    || |||||||||||||||||||||    
T  9380915 gtgggacttgggtttttcccaata 9380892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 17419902 - 17419795
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  17419902 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 17419803  T
Q  271 gtaggact 278  Q
    || |||||    
T  17419802 gtgggact 17419795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 29272992 - 29273111
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  29272992 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 29273091  T
Q  208 gatttgcaaggtgagaattg 227  Q
    |  ||| |||||||| ||||    
T  29273092 ggcttgtaaggtgaggattg 29273111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 5325069 - 5325159
Alignment:
Q  119 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccg 208  Q
    |||||||||||||| |||||| | | |||| ||||||||||| ||| ||||| ||||||||||||| |||| |||||| ||||||||||||    
T  5325069 ttggtgcgtgaataggtttagacggcccttgaattcgataagctctgataccatgttgtaatttggagtctaactcatccttacaaaaccg 5325159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 294
Target Start/End: Original strand, 2997228 - 2997373
Alignment:
Q  150 aattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca 248  Q
    ||||||| ||| ||||||||| ||||| ||||||||| || ||||||  |||||||||||  ||   ||||||| |||| ||| | |||||| |||||      
T  2997228 aattcgagaagctctaataccatgttgaaatttggggcctaactcatctttacaaaaccggcttatgaggtgaggattgcctcatctttatatactcttc 2997327  T
Q  249 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||| ||||||||||||| ||| ||| |||||||| ||||    
T  2997328 tcaagagtcttatctatccgatgtgggatttgagtttttcctaata 2997373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 4022114 - 4022221
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||||| |  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  4022114 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 4022213  T
Q  271 gtaggact 278  Q
    || |||||    
T  4022214 gtgggact 4022221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 45395602 - 45395543
Alignment:
Q  236 ttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    ||||||||||| ||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  45395602 ttataaactcttatcaagagtcttatctatctgatatgggacttgggtttttcccaataa 45395543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 24382193 - 24382263
Alignment:
Q  224 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||| ||| ||| |||  |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  24382193 attgtctccttattaaaaattcttctcaagagtcttatctatccgatgtgggacttgggattttcccaata 24382263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 49142767 - 49142674
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||  ||| ||||||| || | ||| || |||||||||| ||||||| ||||| |||||||| |||| |||||||||||||||||||||    
T  49142767 acaaaaccggcttgtaaggtgataaatttcttctctttataaactatcatcaa-agtcttatctatccaatgtgggacttgggtttttcccaata 49142674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 25799217 - 25799112
Alignment:
Q  190 actcattcttacaaaaccgatt-tgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 288  Q
    |||||| |||||||||||  || || |||||||| |||| | ||| ||||||||||||  |||||||| | ||||||| ||||| |||| ||||||||||    
T  25799217 actcatccttacaaaaccagttctgtaaggtgaggattgccccctctttataaactcttctcaagagttttatctatctgatgtgggacatgggtttttc 25799118  T
Q  289 ccaata 294  Q
    ||||||    
T  25799117 ccaata 25799112  T

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Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 38474379 - 38474291
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| ||  |||||||||||||||||||    
T  38474379 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagaatcctatctatccgatgtaggact 38474291  T

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Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 38870938 - 38871062
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||| || || |||||| |||||||||||| ||   |||||||| | || ||||  |||||||||| | ||||||||||| ||| ||| |||    
T  38870938 tgttgaaatttgaggcctaactcatccttacaaaaccggttcttaaggtgaggagtgcctccactttataaacttttatcaagagtcttatcgatctgat 38871037  T
Q  271 gtaggactt-gggtttttcccaata 294  Q
    || |||||| |||||||||||||||    
T  38871038 gtgggacttggggtttttcccaata 38871062  T

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Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 8520082 - 8520189
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||||||||| ||||||  |||||||||||  ||| |||||||| | || ||| | ||||||||||||  ||||||||   |||||||||||    
T  8520082 tgttgaaatttggggtctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcttctttataaactcttctcaagagtgctatctatccgat 8520181  T
Q  271 gtaggact 278  Q
    || |||||    
T  8520182 gtgggact 8520189  T

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Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 11590490 - 11590411
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    ||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||||| ||| |||||    
T  11590490 aggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggactcgggtttctcctaataa 11590411  T

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Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 266
Target Start/End: Complemental strand, 15013640 - 15013545
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatc 266  Q
    ||||| ||||||||| || ||||||| |||||||||||  ||| |||||||||| ||||| || |||||||||| |  |||||||||  |||||||    
T  15013640 tgttgaaatttggggcctaactcatttttacaaaaccggcttgtaaggtgagaagtgtcttctctttataaactgttctcaagagtcatatctatc 15013545  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 294
Target Start/End: Original strand, 20428991 - 20429086
Alignment:
Q  199 tacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||||   |||||||||| ||  |||| |||||||||| | ||||||||||| || |||||||||| |||||||| | ||| ||||||    
T  20428991 tacaaaaccgattcataaggtgagaaatgcttcctctttataaactattatcaagagtcttatgtatccgatgtgggacttggatgttttccaata 20429086  T

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Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 29265969 - 29265910
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||| |||||  |||||||||| ||| ||||||||| |||||||||||||||||||||    
T  29265969 tttatatactcttctcaagagtcttatccatccgatgtgggacttgggtttttcccaata 29265910  T

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Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 40664319 - 40664224
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    |||||||||||| || ||| ||||||||||||  ||| |||| ||| | || ||||| |||||||||||| ||||||||||  ||||| |||||||    
T  40664319 aatttggggtctaacacatccttacaaaaccggcttgtaaggcgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgt 40664224  T

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Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 43423388 - 43423293
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 272  Q
    ||||||||| || |||||| |||||||||| |  ||| |||||||| | || ||||| ||||||||||||  |||||||| | |||||||||||||    
T  43423388 aatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgt 43423293  T

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Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 253
Target Start/End: Original strand, 21638255 - 21638337
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 253  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | |||||||| |||||||||||| ||||||    
T  21638255 tgttgaaatttggggcctaactcatccttacaaaaccatcttgtaaggtgaggagtgtctcctctttataaactctgatcaag 21638337  T

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Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 24382602 - 24382680
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||| |||| ||||  ||||||||||||  | |||||||| ||||||||||||| |||||||| |||||| |||||    
T  24382602 aggtgagtattgcctccagtttataaactctttttaagagtcttatctatccgatgtgggacttggttttttctcaata 24382680  T

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Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 29413198 - 29413136
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 292  Q
    |||| |||||||||||| ||||||||||| ||||| |||| || |||||||||| ||||||||    
T  29413198 tcctctttataaactcttatcaagagtcttatctacccgaagtgggacttgggtctttcccaa 29413136  T

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Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 24131876 - 24131957
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 258  Q
    |||||||||||| ||||||||||| ||||| |  ||| ||| |||| |||| ||||| ||||||||||||  ||||||||||    
T  24131876 aatttggggtctaactcattcttataaaactggcttgtaagttgaggattgcctcctctttataaactcttctcaagagtct 24131957  T

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Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 39648872 - 39648827
Alignment:
Q  249 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  39648872 tcaagagtcttatctatccgatgtgggacttgggattttcccaata 39648827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 46098655 - 46098530
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||||||||||| ||| | | ||||| ||||  ||||||||| || |||||| ||| |||||||    
T  46098655 ctctttgggcttggtgcgtgaataggtttaggcggcccttaaattcgacaagctttgataccatgttaaaatttggggcctaactcatccttgcaaaacc 46098556  T
Q  208 gatttgcaaggtgagaattgtctcct 233  Q
    |  ||| | |||||| |||| |||||    
T  46098555 ggcttgtatggtgaggattgcctcct 46098530  T

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Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 49828722 - 49828665
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 292  Q
    |||||||| ||| ||||||||||  ||||||| ||||| |||||||||||||||||||    
T  49828722 tttataaaatcttatcaagagtcctatctatcagatgtgggacttgggtttttcccaa 49828665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 11581826 - 11581746
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |||||||  |||| ||||| |||||| | | ||||||||||||| ||||||||||||| ||| ||| |||||| |||||||    
T  11581826 aaggtgatgattgcctcctctttatatattttcatcaagagtcttatctatccgatgtgggatttgagttttttccaataa 11581746  T

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Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 20735851 - 20735763
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  || ||||||| ||||||| ||||| |||||    
T  20735851 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctactcgagagtcttatctatctgatgtgggact 20735763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 28119750 - 28119854
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 289  Q
    |||||| |||||||||  ||||   |||||||||| || || || |||||||||||| ||||||||||| ||| |||  |||||| |||||| |||||||    
T  28119750 actcatccttacaaaatagattcataaggtgagaaatggctactctttataaactcttatcaagagtcttatccatctaatgtagaacttggatttttcc 28119849  T
Q  290 caata 294  Q
     ||||    
T  28119850 taata 28119854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 42845069 - 42845133
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||||||||||| ||||||||||| ||||||| ||||| | ||||| |||||||| ||||    
T  42845069 tcctctttataaactcttatcaagagtcttatctatctgatgtggtacttgagtttttcctaata 42845133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 45982238 - 45982174
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||||||||| | ||||||||| | ||||||| || || |||||||||||||||||||||    
T  45982238 tcctctttataaacttttatcaagagttttatctatctgacgttggacttgggtttttcccaata 45982174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 47377909 - 47377827
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcat---caagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| |||||||||| | |||||||| | ||   ||||||||| ||||||||||||| |||| || |||||||||||||    
T  47377909 aaggtgaggattgtctcctctatataaactattattatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 47377827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 9381214 - 9381099
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||| |||  ||| |||||||| |||| || || ||| || |||||  ||||||||||  ||||||||||    
T  9381214 tgttgaaatttggggcctaactcatccttacaaagccggcttgtaaggtgaggattgccttctctttttatactcttctcaagagtcttgtctatccgat 9381115  T
Q  271 gtaggacttgggtttt 286  Q
    || ||| || ||||||    
T  9381114 gtgggatttaggtttt 9381099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 15391818 - 15391747
Alignment:
Q  216 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 287  Q
    ||||||| |||| ||||| |||||| ||| |  |||||||||| ||||||||||||| |||||||| |||||    
T  15391818 aggtgaggattgcctcctctttatatacttttctcaagagtcttatctatccgatgtgggacttggtttttt 15391747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 31305826 - 31305719
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||| | || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  31305826 tgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatcggat 31305727  T
Q  271 gtaggact 278  Q
    || |||||    
T  31305726 gtgggact 31305719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 36332362 - 36332303
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||| |||||||||   |||||||| |||| ||||||| |||||||||||||    
T  36332362 tttataaactctaatcaagagttctatctatccaatgtgggacttgcgtttttcccaata 36332303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 47086310 - 47086389
Alignment:
Q  215 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||| | |||||| | | |||||||||| ||||||||||| ||||||| ||||| |||| ||| ||||| ||||||    
T  47086310 aaggtgaggagtgtctcatgtatataaactcttatcaagagtcttatctatctgatgtgggacatggattttttccaata 47086389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 49895437 - 49895345
Alignment:
Q  200 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||||||  |  |||| | || |||||||||||||||  ||||||||||||||||||||| ||  || |||||| |||||| ||||||    
T  49895437 acaaaaccgatttgtgaaatgaggagtgcctcctttttataaacgatcatcaagagtctcatctatctga--tatgacttgagttttttccaata 49895345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 12233398 - 12233312
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 257  Q
    ||||||||||||||| || |||||| |||| |||||||  ||| |||||||| | |  ||||| ||||||||||||  |||||||||    
T  12233398 tgttgtaatttggggccttactcatccttataaaaccggcttgtaaggtgaggagtacctcctctttataaactcttctcaagagtc 12233312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 22892495 - 22892533
Alignment:
Q  256 tctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  22892495 tctcatctatctgatgtgggacttgggtttttcccaata 22892533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 27957804 - 27957898
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 271  Q
    |||||||||||| |||||| ||||||||||||  ||| | |||||| |  ||||||| |||||||||| |  |||||| || |||||||| ||||    
T  27957804 aatttggggtctaactcatccttacaaaaccggcttgtacggtgaggagcgtctcctctttataaacttttctcaagaatcccatctatcagatg 27957898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 36331962 - 36331907
Alignment:
Q  235 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||||| |||||||||    ||||||| |||| |||||||||||||||||||||    
T  36331962 tttataaactcttatcaagagt----tctatccaatgtgggacttgggtttttcccaata 36331907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 12314615 - 12314570
Alignment:
Q  249 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    ||||||||||  |||||||||||| |||||||| ||||||||||||    
T  12314615 tcaagagtcttgtctatccgatgtgggacttggatttttcccaata 12314570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 18374570 - 18374517
Alignment:
Q  241 aactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||||||||| ||||||  |||||||| |||| ||||||||||||||| |||||    
T  18374570 aactctcatcgagagtcctatctatccaatgtgggacttgggtttttctcaata 18374517  T

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Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 20735637 - 20735552
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 256  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||| |||  ||||||||    
T  20735637 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaattcttctcaagagt 20735552  T

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Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 22892428 - 22892501
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc 250  Q
    ||||||||| || |||||| ||||||||||||  |||  ||||||| | || ||||| ||||||||||||||||    
T  22892428 aatttggggcctaactcatccttacaaaaccggattgtgaggtgaggagtgcctcctctttataaactctcatc 22892501  T

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Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 33879767 - 33879852
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 256  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  33879767 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagt 33879852  T

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Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 33964488 - 33964403
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 256  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  33964488 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagt 33964403  T

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Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 10017376 - 10017428
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 282  Q
    |||| |||||||||||| ||||||||||| ||||||| ||||| | |||||||    
T  10017376 tcctctttataaactcttatcaagagtcttatctatctgatgtggcacttggg 10017428  T

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Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 12314549 - 12314449
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || || ||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||  ||| || |||||| |||||||||||    
T  12314549 ctctttgggcttagtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattcagggcctaactcatccttacaaaacc 12314450  T
Q  208 g 208  Q
    |    
T  12314449 g 12314449  T

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Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 13356911 - 13357007
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttt-tataaactctcatcaagagtctcatctatccgatgt 272  Q
    ||||| |||||| |||||||| ||||||||||  ||| ||||| || | || |||||||| |||||||||| |||||| |||  ||||| |||||||    
T  13356911 aatttagggtctaactcattcctacaaaaccggcttgtaaggttaggagtgcctccttttttataaactcttatcaagcgtcatatctaaccgatgt 13357007  T

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Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 19937051 - 19937139
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| |   ||||||||||||| |||||    
T  19937051 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaattctatctatccgatgtgggact 19937139  T

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Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 20429283 - 20429347
Alignment:
Q  230 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |||| |||||||||||| ||||||||||| ||| ||||||| | |||||| || ||| |||||||    
T  20429283 tcctctttataaactcttatcaagagtcttatccatccgatctgggacttaggctttacccaata 20429347  T

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Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 35024242 - 35024322
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 257  Q
    ||||||||| || || ||| ||||||||||||   || |||||||| | || ||||| |||||||||||| ||||||||||    
T  35024242 aatttggggcctaacccatccttacaaaaccggcctgtaaggtgaggagtgcctcctgtttataaactcttatcaagagtc 35024322  T

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Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 45858751 - 45858663
Alignment:
Q  190 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 278  Q
    |||||| |||| |||||||| ||| | |||||| | || ||||| ||||||||||||  |||||| ||  ||||||||||||| |||||    
T  45858751 actcatccttataaaaccgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggact 45858663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 13484 - 13298
Alignment:
Q  109 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 207  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| || ||||||||    
T  13484 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattcggggcctaactcatcctcacaaaacc 13385  T
Q  208 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 294  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||| || |||||||||||||    
T  13384 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacctgagtttttcccaata 13298  T

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Target: scaffold0434; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 13628 - 13505
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| |||| || |||||| ||  ||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  13628 tgttgaaattcggggcctaactcatcctcgcaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 13529  T
Q  271 gtaggacttgggtttttcccaata 294  Q
     | |||||||||||||||||||||    
T  13528 ttgggacttgggtttttcccaata 13505  T

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Target: scaffold0029 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 171 - 287
Target Start/End: Complemental strand, 76967 - 76851
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||||||||||||| || ||||||  |||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  76967 tgttgtaatttggggcctaactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 76868  T
Q  271 gtaggacttgggttttt 287  Q
    || ||||||||||||||    
T  76867 gtgggacttgggttttt 76851  T

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Target: scaffold0989 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 2936 - 3058
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| || ||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  2936 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaagtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 3035  T
Q  271 gtaggacttgggtttttcccaat 293  Q
    || ||||||||||||||||||||    
T  3036 gtgggacttgggtttttcccaat 3058  T

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Target: scaffold0054 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 21252 - 21376
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||| || || |||||| ||||||||||| | ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  21252 tgttgaaatttgaggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 21351  T
Q  271 gtaggacttgggt-ttttcccaata 294  Q
    || |||||||||| |||||||||||    
T  21352 gtgggacttgggtattttcccaata 21376  T

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Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 11338 - 11392
Alignment:
Q  177 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctc 231  Q
    ||||| |||||| |||||||||||||||||||| ||| |||||||| | ||||||    
T  11338 aatttagggtctaactcattcttacaaaaccgacttgtaaggtgaggagtgtctc 11392  T

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Target: scaffold1138 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 1862 - 1978
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||||| ||||| |||||| ||||||||||||  ||| |||||||  | || |||||   |||||||||| ||||||||||| |||||||||||    
T  1862 tgttgaaatttgaggtctaactcatgcttacaaaaccggcttgtaaggtgaagagtgcctcctcggtataaactcttatcaagagtcttatctatccgat 1961  T
Q  271 gtaggacttgggttttt 287  Q
    ||  |||||||||||||    
T  1962 gtgagacttgggttttt 1978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 13621 - 13744
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 270  Q
    ||||| |||| ||||||| |||||  ||||||||||||  ||| |||||||| |||| ||| | ||||||  ||||  ||||||||||||||||||||||    
T  13621 tgttgaaattgggggtctaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcgtctttatattctcttctcaagagtctcatctatccgat 13720  T
Q  271 gtaggacttgggtttttcccaata 294  Q
    ||  |||||| ||||| |||||||    
T  13721 gtgtgacttgagttttccccaata 13744  T

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Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 59579 - 59518
Alignment:
Q  229 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 293  Q
    ||||| |||||| |||||  ||||||||   ||||||||||||| ||||||||||||||||||||    
T  59579 ctcctctttatatactcttctcaagagt---atctatccgatgtgggacttgggtttttcccaat 59518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 4228 - 4303
Alignment:
Q  171 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 246  Q
    |||||||||||||||||| |||||| ||||||||||||  ||| |||||||| |||  ||||| |||||| |||||    
T  4228 tgttgtaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactct 4303  T

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Target: scaffold0339 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 15696 - 15765
Alignment:
Q  226 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 295  Q
    |||||||| |||||||||||| ||||| | ||| ||||||  ||||| | ||||||||||||||| ||||    
T  15696 tgtctcctatttataaactcttatcaaaaatcttatctatttgatgtggtacttgggtttttcccgataa 15765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 34507 - 34567
Alignment:
Q  184 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaact 244  Q
    ||||| |||||||||||||||||||  ||| | |||||| | |||||||| ||||||||||    
T  34507 ggtctaactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 34567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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