View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10365_high_30 (Length: 332)
Name: NF10365_high_30
Description: NF10365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10365_high_30 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 14086047 - 14086340
Alignment:
| Q |
1 |
acaagcaagggatttaagtgcaatctgagaaattaggatcaaaattaaacttgcataacattcataactaactaacatgtgaacgggaaatcgccaaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14086047 |
acaagcaagggatttaagtgcaatctgagaaattaggatcaaaattaaacttgcataacattcataactaactagcatgtgaacgggaaatcgccaaaaa |
14086146 |
T |
|
| Q |
101 |
gcataatttagaacaaaaagatacaacgtagatagaactaataaaggagaaatattgaggaaacgttttttataatcaaaatcatattcaatagaattta |
200 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14086147 |
gcataatttagaacaaaaagatacaaagtagatagaactaatgaag---aaatattgaggaaacgttttttataatcataatcatattcaatagaattta |
14086243 |
T |
|
| Q |
201 |
ttttctcacacacctttcccgtaagagaaattttcgaacaagtaggattctctgggtctttcttgccacaagtcccgagagggtattcactgactgt |
297 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14086244 |
ttttctcacacacctttcccgtaagagaaattttcgaacaagtaggattctctgggtctttcttgccacaagtcccgagagggtattcactgactgt |
14086340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 14396065 - 14396358
Alignment:
| Q |
1 |
acaagcaagggatttaagtgcaatctgagaaattaggatcaaaattaaacttgcataacattcataactaactaacatgtgaacgggaaatcgccaaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14396065 |
acaagcaagggatttaagtgcaatctgagaaattaggatcaaaattaaacttgcataacattcataactaactagcatgtgaacgggaaatcgccaaaaa |
14396164 |
T |
|
| Q |
101 |
gcataatttagaacaaaaagatacaacgtagatagaactaataaaggagaaatattgaggaaacgttttttataatcaaaatcatattcaatagaattta |
200 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14396165 |
gcataatttagaacaaaaagatacaaagtagatagaactaatgaag---aaatattgaggaaacgttttttataatcataatcatattcaatagaattta |
14396261 |
T |
|
| Q |
201 |
ttttctcacacacctttcccgtaagagaaattttcgaacaagtaggattctctgggtctttcttgccacaagtcccgagagggtattcactgactgt |
297 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14396262 |
ttttctcacacacctttcccgtaagagaaattttcgaacaagtaggattctctgggtctttcttgccacaagtcccgagagggtattcactgactgt |
14396358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University