View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10365_high_33 (Length: 325)
Name: NF10365_high_33
Description: NF10365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10365_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 64 - 320
Target Start/End: Complemental strand, 10594691 - 10594435
Alignment:
| Q |
64 |
gcgactccgacatcagtctcgtcagcagccgcccctcctccgtcggaatcccctctttcgacctttacaaagaccgctcctatcaacaatccgccatcgc |
163 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
10594691 |
gcgactccgacatcagtctcgtcagcagccgcccctcctccgtcggaatcccctctttcgacctttacaaagaccgctcctatcaacaatccgccgtcgc |
10594592 |
T |
|
| Q |
164 |
aaccatcaactcattcctctcctctcacaatttccacatctctttcaaatcttctccttccccttccgctaaacagattcacgaaaccctaattttcctt |
263 |
Q |
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|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
10594591 |
aaccatcaactccttcctctcctctcacaatttccacatctctttcaaatcttctccttccccttccgctaaacagatccacgaaaccctaattttcctt |
10594492 |
T |
|
| Q |
264 |
accaaactccttgaatttcctgttacaaaactcgaagacgatcttcctttgcttctc |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
10594491 |
accaaactccttgaatttcctgttacaaaactcgaagacgatcttcctttacttctc |
10594435 |
T |
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