View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10365_high_36 (Length: 323)
Name: NF10365_high_36
Description: NF10365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10365_high_36 |
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Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 2 - 302
Target Start/End: Complemental strand, 23369098 - 23368798
Alignment:
| Q |
2 |
catcatcatatatagctactttcaaggcatccaaattgcaattttcttgattaacccctgttaggcagtgtattaatttaactattatttgtgtaatata |
101 |
Q |
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|||||||||||||| ||||||| |||||||||||||| |||||||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||| |
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| T |
23369098 |
catcatcatatatatctactttgaaggcatccaaattacaattttcttaattaacacatgttaggcaatgtattaatttaactattatttgtgtaatata |
23368999 |
T |
|
| Q |
102 |
gaaagttgaatattcaacaattaccattggctgatgagtttgatgatggaccaccttcttcaaatactgaatcaaaattaagtcttgtaataggaagctc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
23368998 |
gaaagttgaatattcaacaattaccattggctgatgagtttgatgatggaccaccttcttcaaataatgaatcaaaattaagtcttgtaataggaagctc |
23368899 |
T |
|
| Q |
202 |
tttaaatctccttctcttttgaactctagttttttgtccctttttggttgtatttagaacttgcggcactacatattgcatcaatgtatgttgatgatgt |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |
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| T |
23368898 |
tttaaatctccttctcttttgaactctagttttttgtccctttttggttgtatttagaactagcggcactacatattgcatcagtgtatgttgatgatgt |
23368799 |
T |
|
| Q |
302 |
c |
302 |
Q |
| |
|
| |
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|
| T |
23368798 |
c |
23368798 |
T |
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