View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10365_high_41 (Length: 313)
Name: NF10365_high_41
Description: NF10365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10365_high_41 |
 | |
|
| [»] scaffold0491 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold0491 (Bit Score: 271; Significance: 1e-151; HSPs: 2)
Name: scaffold0491
Description:
Target: scaffold0491; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 3 - 293
Target Start/End: Complemental strand, 1429 - 1139
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1429 |
agcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
1330 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1329 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
1230 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
1229 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgtatgatgatgt |
1139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0491; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 10 - 293
Target Start/End: Complemental strand, 6309 - 6026
Alignment:
| Q |
10 |
gaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttc |
109 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6309 |
gaagactttgacatgagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttc |
6210 |
T |
|
| Q |
110 |
accgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatgg |
209 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
6209 |
acggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaattttaacagaaataaagcacaaacatatcgtgaagctttatgg |
6110 |
T |
|
| Q |
210 |
attctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| |||||| |||||||||||||||| |
|
|
| T |
6109 |
tttctgcttgcacaaaagaatcatgtttttgatctatcaatacatggatagaggaagcttattctctgtcttgtatgatgatgt |
6026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 3 - 293
Target Start/End: Complemental strand, 18739550 - 18739260
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18739550 |
agcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
18739451 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18739450 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
18739351 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
18739350 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgtatgatgatgt |
18739260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 3 - 293
Target Start/End: Complemental strand, 18744514 - 18744224
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18744514 |
agcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
18744415 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18744414 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
18744315 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
18744314 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgtatgatgatgt |
18744224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 10 - 293
Target Start/End: Complemental strand, 18749468 - 18749185
Alignment:
| Q |
10 |
gaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttc |
109 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18749468 |
gaagactttgacatgagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttc |
18749369 |
T |
|
| Q |
110 |
accgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatgg |
209 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18749368 |
acggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaattttaacagaaataaagcacaaacatattgtgaagctttatgg |
18749269 |
T |
|
| Q |
210 |
attctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| |||||| |||||||||||||||| |
|
|
| T |
18749268 |
attctgcttgcacaaaagaatcatgtttttgatctatcaatacatggatagaggaagcttattctctgtcttgtatgatgatgt |
18749185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 10 - 293
Target Start/End: Complemental strand, 18723816 - 18723533
Alignment:
| Q |
10 |
gaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttc |
109 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18723816 |
gaagactttgacatgagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttc |
18723717 |
T |
|
| Q |
110 |
accgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatgg |
209 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
18723716 |
acggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaattttaacagaaataaagcacaaacatatagtgaagctttatgg |
18723617 |
T |
|
| Q |
210 |
attctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| |||||| |||||||||||||||| |
|
|
| T |
18723616 |
attctgcttgcacaaaagaatcatgtttttgatctatcaatacatggatagaggaagcttattctctgtcttgtatgatgatgt |
18723533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 18733045 - 18732996
Alignment:
| Q |
134 |
cttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaag |
183 |
Q |
| |
|
|||||||| | ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
18733045 |
cttttgattagagttttagaaatgaagtgagaatattatcagaaataaag |
18732996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 1604235 - 1604527
Alignment:
| Q |
1 |
agagcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaa |
100 |
Q |
| |
|
|||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1604235 |
agagcaacggaagacttcgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaa |
1604334 |
T |
|
| Q |
101 |
agaaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaa |
200 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
1604335 |
agaaacttcacggctatgaagaagaggttccatcttttgatgagagtttcaaaaatgaagtgaaaatattatcagaaataaagcaccgacatattgtgaa |
1604434 |
T |
|
| Q |
201 |
gctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
1604435 |
gctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgtatgatgatgt |
1604527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 3 - 293
Target Start/End: Original strand, 1105850 - 1106140
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1105850 |
agcaacggaagactttgacatgagatattgcattggaactggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
1105949 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1105950 |
aaacttcacggctatgaagtcgaggttccatcttttgatgagagtttcaaaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
1106049 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
1106050 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcagtacatggagaaaggaagcctgttctctatcttgtatgatgatgt |
1106140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 3 - 293
Target Start/End: Original strand, 1088501 - 1088791
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| || || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1088501 |
agcaacagaggactttgacatgagatattgcattggaacaggagcatatagaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
1088600 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1088601 |
aaacttcacggctatgaagccgaggttccatcttttgatgagagtttcaaaaatgaagtgagaatattatcagaaataaagcacaaacatattgtgaagc |
1088700 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
1088701 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaaggaagcttgttctctgtcttgtatgatgatgt |
1088791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 3 - 293
Target Start/End: Original strand, 1595907 - 1596197
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
1595907 |
agcaacagaagactttgacatgagatattgcattggaacgggagcatatggaagtgtttacagggcacaattaccaagtggaaaggttgttgccttaaag |
1596006 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1596007 |
aaacttcacggctatgaagccgaggttccatcttttgatgagagtttcaaaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
1596106 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||||| |
|
|
| T |
1596107 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcagtacatggagaaaggaagcctgttctctgtcttgtatgatgatgt |
1596197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 3 - 293
Target Start/End: Complemental strand, 1541779 - 1541489
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
1541779 |
agcaacagaagacttcgacatgagatattgcattggaaccggagcatatggaagtgtttacaaggcacaattaccatgtggaaaggttgttgccttaaag |
1541680 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1541679 |
aaacttcacggctatgaagccgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
1541580 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| |||||||||||||||| |
|
|
| T |
1541579 |
tttatggattttgcttgcacaaaagaatcatgtttttgatctatcaatacatggagagaggaagcttattctctgtcttgtatgatgatgt |
1541489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 3 - 293
Target Start/End: Complemental strand, 1557723 - 1557433
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| |||||| |
|
|
| T |
1557723 |
agcaacagaagactttgacatgagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccatgtggtaatgttgttgctttaaag |
1557624 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
1557623 |
aaacttcacggctatgaagctgaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagaaataaagcacaaacatatcgtgaagc |
1557524 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
1557523 |
tttatggattctgcttgcacaaaagaatcatgtttttgatatatcaatacatggagaaaggaagcttgttctctgtcttgtatgatgatgt |
1557433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 2321041 - 2321332
Alignment:
| Q |
1 |
agagcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| | |
|
|
| T |
2321041 |
agagcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccatgtggaaaagttgttgccttga |
2321140 |
T |
|
| Q |
101 |
agaaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaa |
200 |
Q |
| |
|
||||||||||| |||||||||||||| | ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
2321141 |
agaaacttcacggctatgaagcagagctgccagcttttgatgaaagttttagaaatgaagtgagaatattatcagaaataaagcaccgaaatattgtgaa |
2321240 |
T |
|
| Q |
201 |
gctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatg |
292 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| | |||| |||||||| ||||||||||||||| |
|
|
| T |
2321241 |
gctttatggattttgcttgcacaaaagaatcatgtttttgatctaccattacatggagagaggaagtttgttctccgtcttgtatgatgatg |
2321332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 3 - 293
Target Start/End: Complemental strand, 1551013 - 1550723
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
1551013 |
agcaacagaagactttgacatgagatattgcattggaaccggagcatatggaagtgtttacaaggcacaattaccatgtggcaaggttgtcgccttaaag |
1550914 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
1550913 |
aaacttcatggctatgaagcagacgttccatcttttgatgagagtttcagaaatgaagtgagaatattgacagaaataaagcaccgacatattgtgaagc |
1550814 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||| || |||||||||| ||||| |
|
|
| T |
1550813 |
ttcatggattctgcttgcacaagagaatcatgtttttgatctatcagtacatggagagaggaagcttgttcactgtcttgtatgacgatgt |
1550723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 290
Target Start/End: Original strand, 2329541 - 2329828
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| ||||| |
|
|
| T |
2329541 |
agcaacagaagactttgacattagatattgtattggaacaggagcatatggaagtgtttacaaggcacaattaccatgtggaaaagttgttgcaataaag |
2329640 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |
|
|
| T |
2329641 |
aaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgagaatattatcagatataaagcaccggcatatcgtgaagc |
2329740 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatga |
290 |
Q |
| |
|
||||||||||||| | |||| ||||||||||||||||||||| | |||||||||||| | |||||||||||| ||||||||||||| |
|
|
| T |
2329741 |
tttatggattctgtctccacagaagaatcatgtttttgatctacgagtacatggagaaaggtagcttgttctctgtcttgtatgatga |
2329828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 290
Target Start/End: Original strand, 2337440 - 2337727
Alignment:
| Q |
3 |
agcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaag |
102 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| || |||||||| ||||| |
|
|
| T |
2337440 |
agcaacagaagactttgacattagatattgcattgggacaggagcatatggaagtgtttataaggcacaattaccatgtggaaaagttgttgcaataaag |
2337539 |
T |
|
| Q |
103 |
aaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagc |
202 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
2337540 |
aaacttcacggctatgaagcagaggttccatcttttgatgagagtttcagaaatgaagtgaaaatattatcagatataaagcaccgacatatcgtgaagc |
2337639 |
T |
|
| Q |
203 |
tttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatga |
290 |
Q |
| |
|
||||||||||||| | |||| ||||||||||||||||||||| | |||||||||||| | |||||||||||| |||||||||||| |
|
|
| T |
2337640 |
tttatggattctgtctccacagaagaatcatgtttttgatctacgagtacatggagaaaggtagcttgttctctggcttgtatgatga |
2337727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 3955773 - 3955480
Alignment:
| Q |
1 |
agagcaacggaagattttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaa |
100 |
Q |
| |
|
|||||||| |||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| |
|
|
| T |
3955773 |
agagcaacaaaagactttgacattaaatattgcattggaaaaggagcatatggaagtgtttacaaggcacaattaccaagtggtaaatttgttgcactaa |
3955674 |
T |
|
| Q |
101 |
agaaacttcaccgctatgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaa |
200 |
Q |
| |
|
| |||||||| |||| ||||||||||| |||||| ||||||| ||||| ||||||||||||| |||||||||||||||||||||| || |||||||||| |
|
|
| T |
3955673 |
aaaaacttcatagctacgaagcagaggtgccatctcttgatgaaagttttagaaatgaagtgaaaatattatcagaaataaagcacagaaatattgtgaa |
3955574 |
T |
|
| Q |
201 |
gctttatggattctgcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgtc |
294 |
Q |
| |
|
|||||||||||| || ||||| |||||| | ||||||||||||||||| || ||||| ||| ||||||||||||| ||||| ||||||||||| |
|
|
| T |
3955573 |
gctttatggattttgtttgcataaaagagttatgtttttgatctatcagtatatggaaaaaggaagcttgttctccgtcttgcatgatgatgtc |
3955480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 9532351 - 9532075
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| |||||| | ||||||||| ||| ||| ||||| |||||||||||||||||| || |
|
|
| T |
9532351 |
tttgacattagatattgcatatggacaggagcatatggaagtgtatacaagactcaattaccatgtgacaaagttgtcgccttaaagaaacttcacatct |
9532252 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||| | ||||||| ||| | ||||||| |||||||||||||| || |
|
|
| T |
9532251 |
atgaagcagaggtgccatcttttgatgcgagtttcaaaaatgaagcgagaatattataaaaaataaatcacataaatattgttaagctttatggattatg |
9532152 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| | |||||| |||| |||||||| | |||||||||||||| |
|
|
| T |
9532151 |
attgtacaaaagaatcatgtttttgatctatcaatacgt-gagaaaggaagtttgttctcgtttttgtatgatgatgt |
9532075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 293
Target Start/End: Original strand, 30792169 - 30792447
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||| ||| | ||| ||| | ||| |||||| |||||| | || ||| || ||||||| |||||||||||| ||||||||||| || |
|
|
| T |
30792169 |
tttgacattagatattacatcgagacatgaggacatgaaagtgtatacaagactcatttatcatgtggcaaagttgttgccttatagaaacttcacaact |
30792268 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
||||| || | || ||||||||| | ||||||| |||||||||||||||||||||| ||||||||||| | ||||||| ||||||||| ||||||| |
|
|
| T |
30792269 |
atgaaacaaatgtgtcatcttttgttacaagtttcataaatgaagtgagaatattatcataaataaagcacataaatattgttaagctttatagattctg |
30792368 |
T |
|
| Q |
216 |
cttgcac-aaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||| | |||||| |||||| ||||| | | |||||||||||||| |
|
|
| T |
30792369 |
cttgcacaaaaagaatcgtgtttttgatctatcaatacgtagagaaaagaagctagttctttgttttgtatgatgatgt |
30792447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 293
Target Start/End: Original strand, 19250271 - 19250547
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||| |||||| |||||| | | ||||||| |||| || ||||| || ||||||||| ||||| || |
|
|
| T |
19250271 |
tttgacattagatattgcatcatgacaggatcatatgaaagtgtatacaagactcgattaccatgtggtaaagttgtcgctttaaagaaatttcacaact |
19250370 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
|||||| ||| || || |||||||||| |||||||||| ||||||||||||||||||| | ||||| ||| | ||||||| ||||||||||||||||| |
|
|
| T |
19250371 |
atgaagtagatgtgccgtcttttgatgcgagtttcagaattgaagtgagaatattatcatatataaaacacataaatattgttaagctttatggattctg |
19250470 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatgatgatgt |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | |||||||||||||| |
|
|
| T |
19250471 |
cttgcacaaaagaatcatgtttttgatctatcaatacat-gaaaaatgaagcttgttctcggttttgtatgatgatgt |
19250547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 255
Target Start/End: Complemental strand, 41669091 - 41668852
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| || |
|
|
| T |
41669091 |
tttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaact |
41668992 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
|||||||||| || |||||||||||| |||||||||| |||||||| |||||||| | |||||||||| | ||||||| |||||||||||||| || |
|
|
| T |
41668991 |
atgaagcagatgtgtcatcttttgatgtgagtttcagaattgaagtgaaaatattataaaaaataaagcagataaatattgttaagctttatggattttg |
41668892 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatg |
255 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||||| |
|
|
| T |
41668891 |
cttgcacaaaagaataatgtttttaatctatcgatacatg |
41668852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 255
Target Start/End: Complemental strand, 42978017 - 42977778
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| || |
|
|
| T |
42978017 |
tttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaact |
42977918 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
|||||||||| || |||||||||||| | |||||||| ||||||||||||||||||| |||||||||| | ||||||| |||||||||||||| || |
|
|
| T |
42977917 |
atgaagcagatgtgtcatcttttgatgcgaatttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattttg |
42977818 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatg |
255 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
42977817 |
cttgcacaaaagaatcatgtttttaatctatcaatacatg |
42977778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 287
Target Start/End: Complemental strand, 48712675 - 48712405
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| || |
|
|
| T |
48712675 |
tttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaact |
48712576 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
|| ||||||| || | |||||||||| | |||||||| ||||||||||||||||||| ||||||| || | ||||||| |||||||||||||| || |
|
|
| T |
48712575 |
attaagcagatgtgtcttcttttgatgcgattttcagaattgaagtgagaatattatcaaaaataaa-cagataaatattgttaagctttatggattttg |
48712477 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatga |
287 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||| | ||| ||| |||||||| || |||||||| |
|
|
| T |
48712476 |
cttgcacaaaagaatcatattttcaatctatcaatacatgaaaaaagaaagtttgttctcgattttgtatga |
48712405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 54122786 - 54123025
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| || |
|
|
| T |
54122786 |
tttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaact |
54122885 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
|||||||||| || |||||||||||| ||||||| || ||||||||||||||||| | |||||||||| | |||| | ||||||||| ||| || |
|
|
| T |
54122886 |
atgaagcagatgtgtcatcttttgatgtgagtttcacaattgaagtgagaatattataaaaaataaagcagataaatatctttaagctttatatattttg |
54122985 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatg |
255 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
54122986 |
cttgcacaaaagaatcatgtttttaatctatcaatacatg |
54123025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 16880160 - 16880331
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| || ||| |||||||||||||||| |||||| | | ||||||| | |||| |||| |||||||||||| ||||| || |
|
|
| T |
16880160 |
tttgacattagatattgcatcggcacaagagcatatggaagtgtatacaagactcgattaccatcttgcaaagttgccgccttaaagaaatttcacaact |
16880259 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaa-gtgagaatattatcagaaataaagcac |
186 |
Q |
| |
|
|||||| | | || |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16880260 |
atgaagtaaaagtgtcatcttttgatgcgagtttcagaaatgaatgtgagaatattatcagaaataaagcac |
16880331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 101; Significance: 5e-50; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 16 - 287
Target Start/End: Complemental strand, 8873338 - 8873066
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||||||||||||| |||||| | |||||| || ||||||| ||| ||||||||||||||||| || |
|
|
| T |
8873338 |
tttgacattagatattgcatcgtgacataagcatatggaagtgtatacaagactcaattatcatgtggcaaatttgcgaccttaaagaaacttcacaact |
8873239 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatgga-ttct |
214 |
Q |
| |
|
|||||||||| || |||| ||||||| |||||||||| ||||||||||||||||| | |||||||||| | ||||| | |||||||||||| || | |
|
|
| T |
8873238 |
atgaagcagatgtgtcatcgtttgatgccagtttcagaattgaagtgagaatattataaaaaataaagcagataaatattattaagctttatggattttt |
8873139 |
T |
|
| Q |
215 |
gcttgcacaaaagaatcatgtttttgatctatcaatacatggagaaacgaagcttgttctctatcttgtatga |
287 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| | ||| ||| |||||||| || |||||||| |
|
|
| T |
8873138 |
gcttgcacaaaagaatcatgtttttaatctatcaatacatgaaaaaagaaagtttgttctcgattttgtatga |
8873066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 36620477 - 36620712
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
||||||||||||||| |||| | ||| ||||||||||||| | |||||| | |||||| || ||||||| ||| ||||||||||||||||| || |
|
|
| T |
36620477 |
tttgacattagatat-gcatcgtgacataagcatatggaagtttatacaagactcaattatcatgtggcaaatttgccaccttaaagaaacttcacaact |
36620575 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
|| ||||||| || ||||||||||| |||||||||| ||||||||||||||||||| |||||||||| | ||||||| |||||||||||||| || |
|
|
| T |
36620576 |
attaagcagatgt---atcttttgatgcgagtttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattttg |
36620672 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatg |
255 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
36620673 |
cttgcacaaaagaatcatgtttttaatctatcaatacatg |
36620712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 255
Target Start/End: Complemental strand, 39102529 - 39102292
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
||||||||||||||| |||| | ||| ||||||||||||| | |||||| | |||||| || ||||||| ||| |||||||||| |||||| || |
|
|
| T |
39102529 |
tttgacattagatat-gcatcgtgacataagcatatggaagtttatacaagactcaattatcatgtggcaaatttgcctccttaaagaa-cttcacaact |
39102432 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
|| ||||||| || |||||||||||| ||||| |||| ||||||||||||||||||| |||||||||| | ||||||| |||||||||||||| || |
|
|
| T |
39102431 |
attaagcagatgtgtcatcttttgatgcgagttttagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattttg |
39102332 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatg |
255 |
Q |
| |
|
|||||||||||||| ||||||||| || |||||||||||| |
|
|
| T |
39102331 |
cttgcacaaaagaagcatgtttttaatatatcaatacatg |
39102292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 31657885 - 31658124
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| | ||| |||| |||||||||| |||||| | |||||| || ||||||| |||| ||||||||||||||||| || |
|
|
| T |
31657885 |
tttgacattagatattgcatcgtgacataagcacatggaagtgtatacaagactcaattatcatgtggcaaatttgtcaccttaaagaaacttcacaact |
31657984 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
| ||| ||| || |||||||||||| | |||||||| ||||||||||||||||||| |||||||||| | ||||||| |||||||||||||| || |
|
|
| T |
31657985 |
acgaaatagatgtgtcatcttttgatgcgaatttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaagctttatggattttg |
31658084 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatg |
255 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
31658085 |
cttgcacaaaagaatcatgtttttaatctatcaatacatg |
31658124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 1257679 - 1257918
Alignment:
| Q |
16 |
tttgacattagatattgcattggaacaggagcatatggaagtgtttacaaggcacaattaccaagtggcaaggttgttgccttaaagaaacttcaccgct |
115 |
Q |
| |
|
|||||||||||||||||||| | ||| |||||||| |||||| |||||| | |||||| || ||||| | ||| ||||||||||||||||| | |
|
|
| T |
1257679 |
tttgacattagatattgcatcgtgacataagcatatgaaagtgtatacaagactcaattatcatgtggccaatttgccaccttaaagaaacttcacaaat |
1257778 |
T |
|
| Q |
116 |
atgaagcagaggttccatcttttgatgatagtttcagaaatgaagtgagaatattatcagaaataaagcaccgacatattgtgaagctttatggattctg |
215 |
Q |
| |
|
|||||||||| || ||| |||||||| |||||||||| ||||||||||||||||||| |||||||||| | ||||||| || ||||||| ||| || |
|
|
| T |
1257779 |
atgaagcagatgtgtcattttttgatgcgagtttcagaattgaagtgagaatattatcaaaaataaagcagataaatattgttaaactttatgaattttg |
1257878 |
T |
|
| Q |
216 |
cttgcacaaaagaatcatgtttttgatctatcaatacatg |
255 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
1257879 |
tttgcacaaaagaatcatgtttttaatctatcaatacatg |
1257918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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